Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
18:29:13 (1770377): wrapper (7.7.26015): starting
18:29:13 (1770377): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 18:29:13] Arguments: --nthreads 12
[2025-07-27 18:29:13] Threads: 12
[2025-07-27 18:29:13] Checking for CVMFS
[2025-07-27 18:29:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:29:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:29:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:29:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:29:13] 2.13.1.0 50093 7993 75572 148821 3 187 3454625 4096001 1706 130560 0 16014876 99.996 292765 287 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-27 18:29:13] CVMFS is ok
[2025-07-27 18:29:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:29:13] Checking for apptainer binary...
[2025-07-27 18:29:13] apptainer is not installed, using version from CVMFS
[2025-07-27 18:29:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:29:13] ryzen7
[2025-07-27 18:29:13] apptainer works
[2025-07-27 18:29:13] Set ATHENA_PROC_NUMBER=12
[2025-07-27 18:29:13] Set ATHENA_CORE_NUMBER=12
[2025-07-27 18:29:13] Starting ATLAS job with PandaID=6745352409
[2025-07-27 18:29:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:00:20]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:00:20]  lfn=log.45743349._042479.job.log.tgz.1
[2025-07-27 20:00:20]  mtime=0
[2025-07-27 20:00:20]  protocol_id=None
[2025-07-27 20:00:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 20:00:20]  replicas=None
[2025-07-27 20:00:20]  scope=mc23_13p6TeV
[2025-07-27 20:00:20]  status=None
[2025-07-27 20:00:20]  status_code=0
[2025-07-27 20:00:20]  storage_token=
[2025-07-27 20:00:20]  surl=/opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6745352409/log.45743349._042479.job.log.tgz.1
[2025-07-27 20:00:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/7a/log.45743349._042479.job.log.tgz.1
[2025-07-27 20:00:20]  workdir=None
[2025-07-27 20:00:20] ]
[2025-07-27 20:00:20] 2025-07-27 19:59:45,758 | INFO     | transferring file log.45743349._042479.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6745352409/log.45743349._042479.job.log.tgz.1 t
[2025-07-27 20:00:20] 2025-07-27 19:59:45,758 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6745352409/log.45743349._042479.job.log.tgz.1 /opt/boinc/instance_home
[2025-07-27 20:00:20] 2025-07-27 19:59:45,768 | INFO     | adding to output.list: log.45743349._042479.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/7a/log.45743349._042479.job.log.tg
[2025-07-27 20:00:20] 2025-07-27 19:59:45,769 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 20:00:20] 2025-07-27 19:59:45,769 | INFO     | summary of transferred files:
[2025-07-27 20:00:20] 2025-07-27 19:59:45,769 | INFO     |  -- lfn=log.45743349._042479.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 20:00:20] 2025-07-27 19:59:45,769 | INFO     | stage-out finished correctly
[2025-07-27 20:00:20] 2025-07-27 19:59:45,854 | INFO     | monitor loop #402: job 0:6745352409 is in state 'finished'
[2025-07-27 20:00:20] 2025-07-27 19:59:45,854 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:00:20] 2025-07-27 19:59:45,977 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 20:00:20] 2025-07-27 19:59:46,472 | INFO     | job 6745352409 has state=finished
[2025-07-27 20:00:20] 2025-07-27 19:59:46,472 | INFO     | preparing for final server update for job 6745352409 in state='finished'
[2025-07-27 20:00:20] 2025-07-27 19:59:46,472 | INFO     | this job has now completed (state=finished)
[2025-07-27 20:00:20] 2025-07-27 19:59:46,472 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 20:00:20] 2025-07-27 19:59:46,472 | INFO     | log transfer has been attempted: DONE
[2025-07-27 20:00:20] 2025-07-27 19:59:46,473 | INFO     | job 6745352409 has finished - writing final server update
[2025-07-27 20:00:20] 2025-07-27 19:59:46,473 | INFO     | total number of processed events: 400 (read)
[2025-07-27 20:00:20] 2025-07-27 19:59:46,473 | INFO     | executing command: lscpu
[2025-07-27 20:00:20] 2025-07-27 19:59:46,506 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 20:00:20] 2025-07-27 19:59:48,355 | INFO     | monitor loop #403: job 0:6745352409 is in state 'finished'
[2025-07-27 20:00:20] 2025-07-27 19:59:48,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:00:20] 2025-07-27 19:59:48,783 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 20:00:20] 2025-07-27 19:59:48,785 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3988.4463125
[2025-07-27 20:00:20] 2025-07-27 19:59:48,788 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6745352409/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:00:20] 2025-07-27 19:59:48,788 | INFO     | extracted standard info from prmon json
[2025-07-27 20:00:20] 2025-07-27 19:59:48,788 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:00:20] 2025-07-27 19:59:48,788 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:00:20] 2025-07-27 19:59:48,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:00:20] 2025-07-27 19:59:48,789 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:00:20] 2025-07-27 19:59:48,790 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:00:20] 2025-07-27 19:59:48,790 | INFO     | sum of square deviations: 170944600.5
[2025-07-27 20:00:20] 2025-07-27 19:59:48,790 | INFO     | sum of deviations: -6124136815.5
[2025-07-27 20:00:20] 2025-07-27 19:59:48,791 | INFO     | mean x: 1753643749.5
[2025-07-27 20:00:20] 2025-07-27 19:59:48,791 | INFO     | mean y: 2753872.2073170734
[2025-07-27 20:00:20] 2025-07-27 19:59:48,791 | INFO     | -- intersect: 62827518247.16872
[2025-07-27 20:00:20] 2025-07-27 19:59:48,791 | INFO     | intersect: 62827518247.16872
[2025-07-27 20:00:20] 2025-07-27 19:59:48,791 | INFO     | chi2: 0.01639338534961758
[2025-07-27 20:00:20] 2025-07-27 19:59:48,791 | INFO     | -- intersect: 62827518247.16872
[2025-07-27 20:00:20] 2025-07-27 19:59:48,791 | INFO     | current memory leak: -35.83 B/s (using 82 data points, chi2=0.02)
[2025-07-27 20:00:20] 2025-07-27 19:59:48,791 | INFO     | could have reported an average CPU frequency of 3796 MHz (6 samples)
[2025-07-27 20:00:20] 2025-07-27 19:59:48,791 | INFO     | ..............................
[2025-07-27 20:00:20] 2025-07-27 19:59:48,791 | INFO     | . Timing measurements:
[2025-07-27 20:00:20] 2025-07-27 19:59:48,792 | INFO     | . get job = 0 s
[2025-07-27 20:00:20] 2025-07-27 19:59:48,792 | INFO     | . initial setup = 1 s
[2025-07-27 20:00:20] 2025-07-27 19:59:48,792 | INFO     | . payload setup = 2 s
[2025-07-27 20:00:20] 2025-07-27 19:59:48,792 | INFO     | . stage-in = 0 s
[2025-07-27 20:00:20] 2025-07-27 19:59:48,792 | INFO     | . payload execution = 5409 s
[2025-07-27 20:00:20] 2025-07-27 19:59:48,792 | INFO     | . stage-out = 0 s
[2025-07-27 20:00:20] 2025-07-27 19:59:48,792 | INFO     | . log creation = 0 s
[2025-07-27 20:00:20] 2025-07-27 19:59:48,792 | INFO     | ..............................
[2025-07-27 20:00:20] 2025-07-27 19:59:48,961 | INFO     | 
[2025-07-27 20:00:20] 2025-07-27 19:59:48,961 | INFO     | job summary report
[2025-07-27 20:00:20] 2025-07-27 19:59:48,961 | INFO     | --------------------------------------------------
[2025-07-27 20:00:20] 2025-07-27 19:59:48,961 | INFO     | PanDA job id: 6745352409
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | task id: 45743349
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | errors: (none)
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | pilot state: finished 
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | transexitcode: 0
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | exeerrorcode: 0
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | exeerrordiag: 
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | exitcode: 0
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | exitmsg: OK
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | cpuconsumptiontime: 29238 s
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | nevents: 400
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | neventsw: 0
[2025-07-27 20:00:20] 2025-07-27 19:59:48,962 | INFO     | pid: 1782852
[2025-07-27 20:00:20] 2025-07-27 19:59:48,963 | INFO     | pgrp: 1782852
[2025-07-27 20:00:20] 2025-07-27 19:59:48,963 | INFO     | corecount: 12
[2025-07-27 20:00:20] 2025-07-27 19:59:48,963 | INFO     | event service: False
[2025-07-27 20:00:20] 2025-07-27 19:59:48,963 | INFO     | sizes: {0: 2397496, 2: 2397758, 11: 2397786, 5415: 2424446, 5416: 2433490, 5417: 2433546, 5419: 2433868}
[2025-07-27 20:00:20] 2025-07-27 19:59:48,963 | INFO     | --------------------------------------------------
[2025-07-27 20:00:20] 2025-07-27 19:59:48,963 | INFO     | 
[2025-07-27 20:00:20] 2025-07-27 19:59:48,963 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-07-27 20:00:20] 2025-07-27 19:59:48,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,974 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,974 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,975 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,975 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:00:20] 2025-07-27 19:59:48,975 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,975 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:00:20] 2025-07-27 19:59:48,975 | INFO     | job 6745352409 has completed (purged errors)
[2025-07-27 20:00:20] 2025-07-27 19:59:48,975 | INFO     | overall cleanup function is called
[2025-07-27 20:00:20] 2025-07-27 19:59:49,982 | INFO     | --- collectZombieJob: --- 10, [1782852]
[2025-07-27 20:00:20] 2025-07-27 19:59:49,982 | INFO     | zombie collector waiting for pid 1782852
[2025-07-27 20:00:20] 2025-07-27 19:59:49,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:00:20] 2025-07-27 19:59:49,982 | INFO     | collected zombie processes
[2025-07-27 20:00:20] 2025-07-27 19:59:49,982 | INFO     | will attempt to kill all subprocesses of pid=1782852
[2025-07-27 20:00:20] 2025-07-27 19:59:50,054 | INFO     | process IDs to be killed: [1782852] (in reverse order)
[2025-07-27 20:00:20] 2025-07-27 19:59:50,084 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:00:20] 2025-07-27 19:59:50,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:00:20] 2025-07-27 19:59:50,087 | INFO     | did not find any defunct processes belonging to 1782852
[2025-07-27 20:00:20] 2025-07-27 19:59:50,088 | INFO     | did not find any defunct processes belonging to 1782852
[2025-07-27 20:00:20] 2025-07-27 19:59:50,089 | INFO     | ready for new job
[2025-07-27 20:00:20] 2025-07-27 19:59:50,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:00:20] 2025-07-27 19:59:50,089 | INFO     | ***************************************
[2025-07-27 20:00:20] 2025-07-27 19:59:50,090 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:00:20] 2025-07-27 19:59:50,090 | INFO     | ***************************************
[2025-07-27 20:00:20] 2025-07-27 19:59:50,090 | INFO     | 
[2025-07-27 20:00:20] 2025-07-27 19:59:50,111 | INFO     | architecture information:
[2025-07-27 20:00:20] 2025-07-27 19:59:50,111 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:00:20] 2025-07-27 19:59:50,118 | INFO     | cat /etc/os-release:
[2025-07-27 20:00:20] NAME="CentOS Linux"
[2025-07-27 20:00:20] VERSION="7 (Core)"
[2025-07-27 20:00:20] ID="centos"
[2025-07-27 20:00:20] ID_LIKE="rhel fedora"
[2025-07-27 20:00:20] VERSION_ID="7"
[2025-07-27 20:00:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:00:20] ANSI_COLOR="0;31"
[2025-07-27 20:00:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:00:20] HOME_URL="https://www.centos.org/"
[2025-07-27 20:00:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:00:20] 
[2025-07-27 20:00:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:00:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:00:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:00:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:00:20] 
[2025-07-27 20:00:20] 2025-07-27 19:59:50,118 | INFO     | ***************************************
[2025-07-27 20:00:20] 2025-07-27 19:59:50,621 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-07-27 20:00:20] 2025-07-27 19:59:50,630 | INFO     | sufficient remaining disk space (150160277504 B)
[2025-07-27 20:00:20] 2025-07-27 19:59:50,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:00:20] 2025-07-27 19:59:50,630 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:00:20] 2025-07-27 19:59:50,630 | INFO     | update_server=False
[2025-07-27 20:00:20] 2025-07-27 19:59:50,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:00:20] 2025-07-27 19:59:50,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:00:20] 2025-07-27 19:59:50,858 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 20:00:20] 2025-07-27 19:59:50,858 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 20:00:20] 2025-07-27 19:59:50,858 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:00:20] 2025-07-27 19:59:50,858 | INFO     | will abort loop
[2025-07-27 20:00:20] 2025-07-27 19:59:51,066 | INFO     | all data control threads have been joined
[2025-07-27 20:00:20] 2025-07-27 19:59:51,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:00:20] 2025-07-27 19:59:51,474 | INFO     | all payload control threads have been joined
[2025-07-27 20:00:20] 2025-07-27 19:59:51,634 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:51,634 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:51,746 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:51,846 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:51,862 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:51,982 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:52,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:00:20] 2025-07-27 19:59:52,070 | INFO     | [data] control thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:52,174 | INFO     | all job control threads have been joined
[2025-07-27 20:00:20] 2025-07-27 19:59:52,479 | INFO     | [payload] control thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:52,638 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:52,830 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:52,970 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:52,978 | INFO     | [job] validate thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:53,178 | INFO     | [job] control thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:53,346 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:00:20] 2025-07-27 19:59:56,053 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:00:20] 2025-07-27 20:00:01,250 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:00:20] 2025-07-27 20:00:02,256 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:00:20] 2025-07-27 20:00:02,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386595137344)>', '<ExcThread(monitor, started 140386022446848)>']
[2025-07-27 20:00:20] 2025-07-27 20:00:07,679 | INFO     | all workflow threads have been joined
[2025-07-27 20:00:20] 2025-07-27 20:00:07,679 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:00:20] 2025-07-27 20:00:07,679 | INFO     | traces error code: 0
[2025-07-27 20:00:20] 2025-07-27 20:00:07,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:00:20] 2025-07-27 20:00:20,762 | INFO     | PID=1774112 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:00:20] 2025-07-27 20:00:20,762 | INFO     | .. there are 3 such processes running
[2025-07-27 20:00:20] 2025-07-27 20:00:20,762 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:00:20] 2025-07-27 20:00:20,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:00:20] 2025-07-27 20:00:20,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:00:20] 2025-07-27 20:00:20,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:00:20] 2025-07-27 20:00:20,762 | INFO     | [monitor] control thread has ended
[2025-07-27 20:00:20] 2025-07-27 20:00:20,808 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:00:20] 2025-07-27 20:00:20,810 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:00:20] 2025-07-27 20:00:20,811 [wrapper] pilotpid: 1774112
[2025-07-27 20:00:20] 2025-07-27 20:00:20,813 [wrapper] Pilot exit status: 0
[2025-07-27 20:00:20] 2025-07-27 20:00:20,819 [wrapper] pandaids: 6745352409
[2025-07-27 20:00:20] 2025-07-27 20:00:20,838 [wrapper] cleanup supervisor_pilot 1831877 1774113
[2025-07-27 20:00:20] 2025-07-27 20:00:20,840 [wrapper] Test setup, not cleaning
[2025-07-27 20:00:20] 2025-07-27 20:00:20,842 [wrapper] apfmon messages muted
[2025-07-27 20:00:20] 2025-07-27 20:00:20,843 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:00:20] 2025-07-27 20:00:20,844 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:00:20]  *** Error codes and diagnostics ***
[2025-07-27 20:00:20]     "exeErrorCode": 0,
[2025-07-27 20:00:20]     "exeErrorDiag": "",
[2025-07-27 20:00:20]     "pilotErrorCode": 0,
[2025-07-27 20:00:20]     "pilotErrorDiag": "",
[2025-07-27 20:00:20]  *** Listing of results directory ***
[2025-07-27 20:00:20] total 356612
[2025-07-27 20:00:20] -rwx------ 1 boinc boinc     36292 Jul 26 18:40 runpilot2-wrapper.sh
[2025-07-27 20:00:20] -rw-r--r-- 1 boinc boinc      5112 Jul 26 18:40 queuedata.json
[2025-07-27 20:00:20] -rw-r--r-- 1 boinc boinc    530466 Jul 26 18:40 pilot3.tar.gz
[2025-07-27 20:00:20] -rw-rw-r-- 1 boinc boinc       100 Jul 27 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:00:20] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 18:29 run_atlas
[2025-07-27 20:00:20] -rw-rw-r-- 1 boinc boinc       105 Jul 27 18:29 job.xml
[2025-07-27 20:00:20] drwxrwx--x 2 boinc boinc      4096 Jul 27 18:29 shared
[2025-07-27 20:00:20] -rw-r--r-- 2 boinc boinc    542884 Jul 27 18:29 input.tar.gz
[2025-07-27 20:00:20] -rw-rw-r-- 1 boinc boinc      9702 Jul 27 18:29 init_data.xml
[2025-07-27 20:00:20] -rw-r--r-- 2 boinc boinc 148837325 Jul 27 18:29 EVNT.45743347._002397.pool.root.1
[2025-07-27 20:00:20] -rw-r--r-- 2 boinc boinc     15095 Jul 27 18:29 start_atlas.sh
[2025-07-27 20:00:20] -rw-rw-r-- 1 boinc boinc         0 Jul 27 18:29 boinc_lockfile
[2025-07-27 20:00:20] -rw-rw-r-- 1 boinc boinc      2562 Jul 27 18:29 pandaJob.out
[2025-07-27 20:00:20] -rw------- 1 boinc boinc    980125 Jul 27 18:29 agis_schedconf.cvmfs.json
[2025-07-27 20:00:20] -rw------- 1 boinc boinc   1593052 Jul 27 18:29 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:00:20] drwx------ 4 boinc boinc      4096 Jul 27 18:29 pilot3
[2025-07-27 20:00:20] -rw------- 1 boinc boinc 210652951 Jul 27 19:59 HITS.45743349._042479.pool.root.1
[2025-07-27 20:00:20] -rw------- 1 boinc boinc        95 Jul 27 19:59 pilot_heartbeat.json
[2025-07-27 20:00:20] -rw-rw-r-- 1 boinc boinc       529 Jul 27 19:59 boinc_task_state.xml
[2025-07-27 20:00:20] -rw------- 1 boinc boinc      1021 Jul 27 19:59 memory_monitor_summary.json
[2025-07-27 20:00:20] -rw------- 1 boinc boinc    355869 Jul 27 19:59 log.45743349._042479.job.log.tgz.1
[2025-07-27 20:00:20] -rw------- 1 boinc boinc      7738 Jul 27 19:59 heartbeat.json
[2025-07-27 20:00:20] -rw-rw-r-- 1 boinc boinc      8192 Jul 27 20:00 boinc_mmap_file
[2025-07-27 20:00:20] -rw-rw-r-- 1 boinc boinc        27 Jul 27 20:00 wrapper_checkpoint.txt
[2025-07-27 20:00:20] -rw------- 1 boinc boinc       822 Jul 27 20:00 pilotlog.txt
[2025-07-27 20:00:20] -rw------- 1 boinc boinc    547271 Jul 27 20:00 log.45743349._042479.job.log.1
[2025-07-27 20:00:20] -rw------- 1 boinc boinc       357 Jul 27 20:00 output.list
[2025-07-27 20:00:20] -rw-rw-r-- 1 boinc boinc       620 Jul 27 20:00 runtime_log
[2025-07-27 20:00:20] -rw------- 1 boinc boinc    921600 Jul 27 20:00 result.tar.gz
[2025-07-27 20:00:20] -rw-rw-r-- 1 boinc boinc      8954 Jul 27 20:00 runtime_log.err
[2025-07-27 20:00:20] -rw------- 1 boinc boinc       648 Jul 27 20:00 ChDLDmnzyz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFF1KDm0t279n.diag
[2025-07-27 20:00:20] -rw-rw-r-- 1 boinc boinc     21430 Jul 27 20:00 stderr.txt
[2025-07-27 20:00:20] HITS file was successfully produced:
[2025-07-27 20:00:20] -rw------- 1 boinc boinc 210652951 Jul 27 19:59 shared/HITS.pool.root.1
[2025-07-27 20:00:20]  *** Contents of shared directory: ***
[2025-07-27 20:00:20] total 352520
[2025-07-27 20:00:20] -rw-r--r-- 2 boinc boinc    542884 Jul 27 18:29 input.tar.gz
[2025-07-27 20:00:20] -rw-r--r-- 2 boinc boinc 148837325 Jul 27 18:29 ATLAS.root_0
[2025-07-27 20:00:20] -rw-r--r-- 2 boinc boinc     15095 Jul 27 18:29 start_atlas.sh
[2025-07-27 20:00:20] -rw------- 1 boinc boinc 210652951 Jul 27 19:59 HITS.pool.root.1
[2025-07-27 20:00:20] -rw------- 1 boinc boinc    921600 Jul 27 20:00 result.tar.gz
20:00:22 (1770377): run_atlas exited; CPU time 29259.854650
20:00:22 (1770377): called boinc_finish(0)

</stderr_txt>
]]>

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