Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:06:15 (18367): wrapper (7.7.26015): starting
14:06:15 (18367): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 14:06:15] Arguments: --nthreads 8
[2025-07-27 14:06:15] Threads: 8
[2025-07-27 14:06:15] Checking for CVMFS
[2025-07-27 14:06:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:06:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:06:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:06:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:06:19] 2.11.2.0 13101 109521 111712 148811 3 60 16770713 25165824 4632 130560 0 69782271 99.867 46545142 3357 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 14:06:19] CVMFS is ok
[2025-07-27 14:06:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:06:19] Checking for apptainer binary...
[2025-07-27 14:06:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:06:19] Running /usr/bin/apptainer --version
[2025-07-27 14:06:19] apptainer version 1.3.2-1.el7
[2025-07-27 14:06:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:15:48] cg-vwn269.simple-grid.lan
[2025-07-27 15:15:48] apptainer works
[2025-07-27 15:15:48] Set ATHENA_PROC_NUMBER=8
[2025-07-27 15:15:48] Set ATHENA_CORE_NUMBER=8
[2025-07-27 15:15:48] Starting ATLAS job with PandaID=6745354364
[2025-07-27 15:15:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:40:22]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:40:22] 2025-07-27 17:51:28,692 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:40:22] 2025-07-27 17:51:28,692 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:40:22] 2025-07-27 17:51:28,707 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:40:22] 2025-07-27 17:51:28,708 | INFO     | sum of square deviations: 6035722470.0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,710 | INFO     | sum of deviations: -30149593491.000008
[2025-07-27 20:40:22] 2025-07-27 17:51:28,710 | INFO     | mean x: 1753630399.0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,711 | INFO     | mean y: 2515713.040892193
[2025-07-27 20:40:22] 2025-07-27 17:51:28,711 | INFO     | -- intersect: 8762236513.011694
[2025-07-27 20:40:22] 2025-07-27 17:51:28,711 | INFO     | intersect: 8762236513.011694
[2025-07-27 20:40:22] 2025-07-27 17:51:28,711 | INFO     | chi2: 2.6121835086388696
[2025-07-27 20:40:22] 2025-07-27 17:51:28,717 | INFO     | sum of square deviations: 5705372090.0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,719 | INFO     | sum of deviations: -11941197160.499994
[2025-07-27 20:40:22] 2025-07-27 17:51:28,720 | INFO     | mean x: 1753630246.5
[2025-07-27 20:40:22] 2025-07-27 17:51:28,720 | INFO     | mean y: 2523995.140151515
[2025-07-27 20:40:22] 2025-07-27 17:51:28,720 | INFO     | -- intersect: 3672827034.056007
[2025-07-27 20:40:22] 2025-07-27 17:51:28,720 | INFO     | intersect: 3672827034.056007
[2025-07-27 20:40:22] 2025-07-27 17:51:28,720 | INFO     | chi2: 1.8483614903254644
[2025-07-27 20:40:22] 2025-07-27 17:51:28,720 | INFO     | current chi2=1.8483614903254644 (change=29.24074881367772 %)
[2025-07-27 20:40:22] 2025-07-27 17:51:28,721 | INFO     | sum of square deviations: 5387301010.0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,723 | INFO     | sum of deviations: -11695161682.000004
[2025-07-27 20:40:22] 2025-07-27 17:51:28,723 | INFO     | mean x: 1753630094.0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,723 | INFO     | mean y: 2524113.115830116
[2025-07-27 20:40:22] 2025-07-27 17:51:28,724 | INFO     | -- intersect: 3809437341.406162
[2025-07-27 20:40:22] 2025-07-27 17:51:28,724 | INFO     | intersect: 3809437341.406162
[2025-07-27 20:40:22] 2025-07-27 17:51:28,724 | INFO     | chi2: 1.8477094139979666
[2025-07-27 20:40:22] 2025-07-27 17:51:28,724 | INFO     | current chi2=1.8477094139979666 (change=0.03527861464928775 %)
[2025-07-27 20:40:22] 2025-07-27 17:51:28,724 | INFO     | right removable region: 258
[2025-07-27 20:40:22] 2025-07-27 17:51:28,725 | INFO     | sum of square deviations: 5705372090.0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,727 | INFO     | sum of deviations: -76611568045.0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,727 | INFO     | mean x: 1753630551.5
[2025-07-27 20:40:22] 2025-07-27 17:51:28,736 | INFO     | mean y: 2537012.196969697
[2025-07-27 20:40:22] 2025-07-27 17:51:28,736 | INFO     | -- intersect: 23550236303.801476
[2025-07-27 20:40:22] 2025-07-27 17:51:28,736 | INFO     | intersect: 23550236303.801476
[2025-07-27 20:40:22] 2025-07-27 17:51:28,736 | INFO     | chi2: 1.0213928719489815
[2025-07-27 20:40:22] 2025-07-27 17:51:28,737 | INFO     | current chi2=1.0213928719489815 (change=60.89888522107704 %)
[2025-07-27 20:40:22] 2025-07-27 17:51:28,737 | INFO     | sum of square deviations: 5387301010.0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,739 | INFO     | sum of deviations: -79248671001.00002
[2025-07-27 20:40:22] 2025-07-27 17:51:28,740 | INFO     | mean x: 1753630704.0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,740 | INFO     | mean y: 2538260.5135135134
[2025-07-27 20:40:22] 2025-07-27 17:51:28,740 | INFO     | -- intersect: 25798925442.255196
[2025-07-27 20:40:22] 2025-07-27 17:51:28,740 | INFO     | intersect: 25798925442.255196
[2025-07-27 20:40:22] 2025-07-27 17:51:28,740 | INFO     | chi2: 0.9940118467466919
[2025-07-27 20:40:22] 2025-07-27 17:51:28,740 | INFO     | current chi2=0.9940118467466919 (change=2.680753503795488 %)
[2025-07-27 20:40:22] 2025-07-27 17:51:28,741 | INFO     | left removable region: 20
[2025-07-27 20:40:22] 2025-07-27 17:51:28,741 | INFO     | sum of square deviations: 4180243959.5
[2025-07-27 20:40:22] 2025-07-27 17:51:28,743 | INFO     | sum of deviations: -45963079648.999985
[2025-07-27 20:40:22] 2025-07-27 17:51:28,743 | INFO     | mean x: 1753630673.5
[2025-07-27 20:40:22] 2025-07-27 17:51:28,743 | INFO     | mean y: 2540520.3613445377
[2025-07-27 20:40:22] 2025-07-27 17:51:28,743 | INFO     | -- intersect: 19284254004.53102
[2025-07-27 20:40:22] 2025-07-27 17:51:28,744 | INFO     | intersect: 19284254004.53102
[2025-07-27 20:40:22] 2025-07-27 17:51:28,744 | INFO     | chi2: 0.19222982140284944
[2025-07-27 20:40:22] 2025-07-27 17:51:28,744 | INFO     | -- intersect: 19284254004.53102
[2025-07-27 20:40:22] 2025-07-27 17:51:28,744 | INFO     | current memory leak: -11.00 B/s (using 238 data points, chi2=0.19)
[2025-07-27 20:40:22] 2025-07-27 17:51:28,745 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 20:40:22] 2025-07-27 17:51:28,745 | INFO     | ..............................
[2025-07-27 20:40:22] 2025-07-27 17:51:28,745 | INFO     | . Timing measurements:
[2025-07-27 20:40:22] 2025-07-27 17:51:28,745 | INFO     | . get job = 0 s
[2025-07-27 20:40:22] 2025-07-27 17:51:28,745 | INFO     | . initial setup = 2 s
[2025-07-27 20:40:22] 2025-07-27 17:51:28,746 | INFO     | . payload setup = 13 s
[2025-07-27 20:40:22] 2025-07-27 17:51:28,746 | INFO     | . stage-in = 0 s
[2025-07-27 20:40:22] 2025-07-27 17:51:28,746 | INFO     | . payload execution = 16377 s
[2025-07-27 20:40:22] 2025-07-27 17:51:28,746 | INFO     | . stage-out = 4 s
[2025-07-27 20:40:22] 2025-07-27 17:51:28,746 | INFO     | . log creation = 1 s
[2025-07-27 20:40:22] 2025-07-27 17:51:28,746 | INFO     | ..............................
[2025-07-27 20:40:22] 2025-07-27 17:51:28,919 | INFO     | 
[2025-07-27 20:40:22] 2025-07-27 17:51:28,919 | INFO     | job summary report
[2025-07-27 20:40:22] 2025-07-27 17:51:28,920 | INFO     | --------------------------------------------------
[2025-07-27 20:40:22] 2025-07-27 17:51:28,920 | INFO     | PanDA job id: 6745354364
[2025-07-27 20:40:22] 2025-07-27 17:51:28,920 | INFO     | task id: 45743349
[2025-07-27 20:40:22] 2025-07-27 17:51:28,920 | INFO     | errors: (none)
[2025-07-27 20:40:22] 2025-07-27 17:51:28,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:40:22] 2025-07-27 17:51:28,920 | INFO     | pilot state: finished 
[2025-07-27 20:40:22] 2025-07-27 17:51:28,920 | INFO     | transexitcode: 0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,920 | INFO     | exeerrorcode: 0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,920 | INFO     | exeerrordiag: 
[2025-07-27 20:40:22] 2025-07-27 17:51:28,920 | INFO     | exitcode: 0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,920 | INFO     | exitmsg: OK
[2025-07-27 20:40:22] 2025-07-27 17:51:28,921 | INFO     | cpuconsumptiontime: 61636 s
[2025-07-27 20:40:22] 2025-07-27 17:51:28,921 | INFO     | nevents: 400
[2025-07-27 20:40:22] 2025-07-27 17:51:28,921 | INFO     | neventsw: 0
[2025-07-27 20:40:22] 2025-07-27 17:51:28,921 | INFO     | pid: 30021
[2025-07-27 20:40:22] 2025-07-27 17:51:28,921 | INFO     | pgrp: 30021
[2025-07-27 20:40:22] 2025-07-27 17:51:28,921 | INFO     | corecount: 8
[2025-07-27 20:40:22] 2025-07-27 17:51:28,921 | INFO     | event service: False
[2025-07-27 20:40:22] 2025-07-27 17:51:28,921 | INFO     | sizes: {0: 2397299, 1: 2397498, 9: 2397760, 12: 2397788, 16394: 2428952, 16395: 2428951, 16399: 2438191, 16497: 2438329}
[2025-07-27 20:40:22] 2025-07-27 17:51:28,921 | INFO     | --------------------------------------------------
[2025-07-27 20:40:22] 2025-07-27 17:51:28,921 | INFO     | 
[2025-07-27 20:40:22] 2025-07-27 17:51:28,922 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-07-27 20:40:22] 2025-07-27 17:51:29,244 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,244 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,244 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,245 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,245 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,245 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,245 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,245 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,246 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:40:22] 2025-07-27 17:51:29,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,246 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:40:22] 2025-07-27 17:51:29,247 | INFO     | job 6745354364 has completed (purged errors)
[2025-07-27 20:40:22] 2025-07-27 17:51:29,247 | INFO     | overall cleanup function is called
[2025-07-27 20:40:22] 2025-07-27 17:51:30,256 | INFO     | --- collectZombieJob: --- 10, [30021]
[2025-07-27 20:40:22] 2025-07-27 17:51:30,257 | INFO     | zombie collector waiting for pid 30021
[2025-07-27 20:40:22] 2025-07-27 17:51:30,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:40:22] 2025-07-27 17:51:30,257 | INFO     | collected zombie processes
[2025-07-27 20:40:22] 2025-07-27 17:51:30,257 | INFO     | will attempt to kill all subprocesses of pid=30021
[2025-07-27 20:40:22] 2025-07-27 17:51:30,393 | INFO     | process IDs to be killed: [30021] (in reverse order)
[2025-07-27 20:40:22] 2025-07-27 17:51:30,958 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:40:22] 2025-07-27 17:51:30,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:40:22] 2025-07-27 17:51:30,962 | INFO     | did not find any defunct processes belonging to 30021
[2025-07-27 20:40:22] 2025-07-27 17:51:30,965 | INFO     | did not find any defunct processes belonging to 30021
[2025-07-27 20:40:22] 2025-07-27 17:51:30,965 | INFO     | ready for new job
[2025-07-27 20:40:22] 2025-07-27 17:51:30,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:40:22] 2025-07-27 17:51:30,967 | INFO     | ***************************************
[2025-07-27 20:40:22] 2025-07-27 17:51:30,967 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:40:22] 2025-07-27 17:51:30,967 | INFO     | ***************************************
[2025-07-27 20:40:22] 2025-07-27 17:51:30,968 | INFO     | 
[2025-07-27 20:40:22] 2025-07-27 17:51:30,968 | INFO     | pilot is running in a VM
[2025-07-27 20:40:22] 2025-07-27 17:51:30,968 | INFO     | architecture information:
[2025-07-27 20:40:22] 2025-07-27 17:51:30,971 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:40:22] 2025-07-27 17:51:31,256 | INFO     | cat /etc/os-release:
[2025-07-27 20:40:22] NAME="CentOS Linux"
[2025-07-27 20:40:22] VERSION="7 (Core)"
[2025-07-27 20:40:22] ID="centos"
[2025-07-27 20:40:22] ID_LIKE="rhel fedora"
[2025-07-27 20:40:22] VERSION_ID="7"
[2025-07-27 20:40:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:40:22] ANSI_COLOR="0;31"
[2025-07-27 20:40:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:40:22] HOME_URL="https://www.centos.org/"
[2025-07-27 20:40:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:40:22] 
[2025-07-27 20:40:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:40:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:40:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:40:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:40:22] 
[2025-07-27 20:40:22] 2025-07-27 17:51:31,256 | INFO     | ***************************************
[2025-07-27 20:40:22] 2025-07-27 17:51:31,759 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-07-27 20:40:22] 2025-07-27 17:51:32,044 | INFO     | sufficient remaining disk space (496717791232 B)
[2025-07-27 20:40:22] 2025-07-27 17:51:32,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:40:22] 2025-07-27 17:51:32,045 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:40:22] 2025-07-27 17:51:32,045 | INFO     | update_server=False
[2025-07-27 20:40:22] 2025-07-27 17:51:32,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:40:22] 2025-07-27 17:51:32,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:40:22] 2025-07-27 17:51:32,047 | INFO     | aborting loop
[2025-07-27 20:40:22] 2025-07-27 17:51:32,186 | INFO     | all job control threads have been joined
[2025-07-27 20:40:22] 2025-07-27 17:51:32,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:40:22] 2025-07-27 17:51:32,574 | INFO     | all data control threads have been joined
[2025-07-27 20:40:22] 2025-07-27 17:51:32,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:40:22] 2025-07-27 17:51:32,941 | INFO     | all payload control threads have been joined
[2025-07-27 20:40:22] 2025-07-27 17:51:33,051 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:33,053 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:33,193 | INFO     | [job] control thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:33,335 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:33,581 | INFO     | [data] control thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:33,660 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:33,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:40:22] 2025-07-27 17:51:33,948 | INFO     | [payload] control thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:33,972 | INFO     | [job] validate thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:34,106 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:34,256 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:34,281 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:34,303 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:34,493 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:34,545 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:34,942 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:36,638 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:40:22] 2025-07-27 17:51:38,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444613736256)>', '<ExcThread(monitor, started 140443887073024)>']
[2025-07-27 20:40:22] 2025-07-27 17:51:43,079 | INFO     | all workflow threads have been joined
[2025-07-27 20:40:22] 2025-07-27 17:51:43,080 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:40:22] 2025-07-27 17:51:43,080 | INFO     | traces error code: 0
[2025-07-27 20:40:22] 2025-07-27 17:51:43,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:40:22] 2025-07-27 17:52:01,455 | INFO     | PID=23436 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 20:40:22] 2025-07-27 17:52:01,455 | INFO     | .. there are 9 such processes running
[2025-07-27 20:40:22] 2025-07-27 17:52:01,456 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:40:22] 2025-07-27 17:52:01,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:40:22] 2025-07-27 17:52:01,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:40:22] 2025-07-27 17:52:01,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:40:22] 2025-07-27 17:52:01,457 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 20:40:22] 2025-07-27 17:52:01,457 | INFO     | [monitor] control thread has ended
[2025-07-27 20:40:22] 2025-07-27 17:52:01,813 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:40:22] 2025-07-27 17:52:01,897 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:40:22] 2025-07-27 17:52:01,978 [wrapper] pilotpid: 23436
[2025-07-27 20:40:22] 2025-07-27 17:52:02,101 [wrapper] Pilot exit status: 0
[2025-07-27 20:40:22] 2025-07-27 17:52:02,654 [wrapper] pandaids: 6745354364
[2025-07-27 20:40:22] 2025-07-27 17:52:03,397 [wrapper] cleanup supervisor_pilot  8312 23437
[2025-07-27 20:40:22] 2025-07-27 17:52:03,514 [wrapper] Test setup, not cleaning
[2025-07-27 20:40:22] 2025-07-27 17:52:03,606 [wrapper] apfmon messages muted
[2025-07-27 20:40:22] 2025-07-27 17:52:03,695 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:40:22] 2025-07-27 17:52:03,800 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:40:22]  *** Error codes and diagnostics ***
[2025-07-27 20:40:22]     "exeErrorCode": 0,
[2025-07-27 20:40:22]     "exeErrorDiag": "",
[2025-07-27 20:40:22]     "pilotErrorCode": 0,
[2025-07-27 20:40:22]     "pilotErrorDiag": "",
[2025-07-27 20:40:22]  *** Listing of results directory ***
[2025-07-27 20:40:22] total 352248
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc    530466 Jul 26 20:40 pilot3.tar.gz
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc      5112 Jul 26 20:46 queuedata.json
[2025-07-27 20:40:22] -rwx------. 1 boinc boinc     36292 Jul 26 20:47 runpilot2-wrapper.sh
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc       100 Jul 27 14:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:40:22] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 14:06 run_atlas
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc       105 Jul 27 14:06 job.xml
[2025-07-27 20:40:22] -rw-r--r--. 2 boinc boinc 143932545 Jul 27 14:06 EVNT.45743347._002401.pool.root.1
[2025-07-27 20:40:22] -rw-r--r--. 2 boinc boinc     15095 Jul 27 14:06 start_atlas.sh
[2025-07-27 20:40:22] drwxrwx--x. 2 boinc boinc        68 Jul 27 14:06 shared
[2025-07-27 20:40:22] -rw-r--r--. 2 boinc boinc    542883 Jul 27 14:06 input.tar.gz
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc      6392 Jul 27 14:06 init_data.xml
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc         0 Jul 27 14:06 boinc_lockfile
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc      2560 Jul 27 15:15 pandaJob.out
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc    980117 Jul 27 15:16 agis_schedconf.cvmfs.json
[2025-07-27 20:40:22] drwx------. 4 boinc boinc      4096 Jul 27 15:16 pilot3
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc 209269174 Jul 27 19:48 HITS.45743349._042541.pool.root.1
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc       531 Jul 27 19:48 boinc_task_state.xml
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc      1034 Jul 27 19:49 memory_monitor_summary.json
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc   1593052 Jul 27 19:49 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc    393777 Jul 27 19:49 log.45743349._042541.job.log.tgz.1
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc      7782 Jul 27 19:51 heartbeat.json
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc        95 Jul 27 19:52 pilot_heartbeat.json
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc       890 Jul 27 19:52 pilotlog.txt
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc   1422146 Jul 27 19:52 log.45743349._042541.job.log.1
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc       357 Jul 27 19:52 output.list
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc       620 Jul 27 19:52 runtime_log
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc   1832960 Jul 27 19:52 result.tar.gz
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc      8674 Jul 27 19:52 runtime_log.err
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc       657 Jul 27 19:52 RH5KDmp6yz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUqSLDmyojzLo.diag
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc        28 Jul 27 20:40 wrapper_checkpoint.txt
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc      8192 Jul 27 20:40 boinc_mmap_file
[2025-07-27 20:40:22] -rw-r--r--. 1 boinc boinc     20574 Jul 27 20:40 stderr.txt
[2025-07-27 20:40:22] HITS file was successfully produced:
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc 209269174 Jul 27 19:48 shared/HITS.pool.root.1
[2025-07-27 20:40:22]  *** Contents of shared directory: ***
[2025-07-27 20:40:22] total 347268
[2025-07-27 20:40:22] -rw-r--r--. 2 boinc boinc 143932545 Jul 27 14:06 ATLAS.root_0
[2025-07-27 20:40:22] -rw-r--r--. 2 boinc boinc     15095 Jul 27 14:06 start_atlas.sh
[2025-07-27 20:40:22] -rw-r--r--. 2 boinc boinc    542883 Jul 27 14:06 input.tar.gz
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc 209269174 Jul 27 19:48 HITS.pool.root.1
[2025-07-27 20:40:22] -rw-------. 1 boinc boinc   1832960 Jul 27 19:52 result.tar.gz
20:40:24 (18367): run_atlas exited; CPU time 61839.009077
20:40:24 (18367): called boinc_finish(0)

</stderr_txt>
]]>

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