Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:33:55 (6020): wrapper (7.7.26015): starting
19:33:55 (6020): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 19:33:55] Arguments: --nthreads 12
[2025-07-26 19:33:55] Threads: 12
[2025-07-26 19:33:55] Checking for CVMFS
[2025-07-26 19:33:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 19:33:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 19:33:55] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 19:33:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 19:33:55] 2.11.2.0 3081 111180 101092 148793 0 56 14634165 20275200 1 130560 0 37435587 99.969 9605811 10503 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 19:33:55] CVMFS is ok
[2025-07-26 19:33:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 19:33:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 19:33:55] Further information can be found at the LHC@home message board.
[2025-07-26 19:33:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 19:33:55] Checking for apptainer binary...
[2025-07-26 19:33:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 19:33:55] Running /usr/bin/apptainer --version
[2025-07-26 19:33:55] apptainer version 1.3.2-1.el7
[2025-07-26 19:33:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 19:33:57] c-205-29.aglt2.org
[2025-07-26 19:33:57] apptainer works
[2025-07-26 19:33:57] Set ATHENA_PROC_NUMBER=12
[2025-07-26 19:33:57] Set ATHENA_CORE_NUMBER=12
[2025-07-26 19:33:57] Starting ATLAS job with PandaID=6745352191
[2025-07-26 19:33:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 20:58:39]  *** The last 200 lines of the pilot log: ***
[2025-07-26 20:58:39]  is_tar=False
[2025-07-26 20:58:39]  lfn=log.45743349._042261.job.log.tgz.1
[2025-07-26 20:58:39]  mtime=0
[2025-07-26 20:58:39]  protocol_id=None
[2025-07-26 20:58:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 20:58:39]  replicas=None
[2025-07-26 20:58:39]  scope=mc23_13p6TeV
[2025-07-26 20:58:39]  status=None
[2025-07-26 20:58:39]  status_code=0
[2025-07-26 20:58:39]  storage_token=
[2025-07-26 20:58:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745352191/log.45743349._042261.job.log.tgz.1
[2025-07-26 20:58:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/fe/log.45743349._042261.job.log.tgz.1
[2025-07-26 20:58:39]  workdir=None
[2025-07-26 20:58:39] ]
[2025-07-26 20:58:39] 2025-07-27 00:57:59,065 | INFO     | transferring file log.45743349._042261.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745352191/log.45743349._042261.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 20:58:39] 2025-07-27 00:57:59,065 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745352191/log.45743349._042261.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._042261.job
[2025-07-26 20:58:39] 2025-07-27 00:57:59,093 | INFO     | adding to output.list: log.45743349._042261.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/fe/log.45743349._042261.job.log.tg
[2025-07-26 20:58:39] 2025-07-27 00:57:59,094 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 20:58:39] 2025-07-27 00:57:59,094 | INFO     | summary of transferred files:
[2025-07-26 20:58:39] 2025-07-27 00:57:59,094 | INFO     |  -- lfn=log.45743349._042261.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 20:58:39] 2025-07-27 00:57:59,094 | INFO     | stage-out finished correctly
[2025-07-26 20:58:39] 2025-07-27 00:58:00,454 | INFO     | monitor loop #376: job 0:6745352191 is in state 'finished'
[2025-07-26 20:58:39] 2025-07-27 00:58:00,454 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:58:39] 2025-07-27 00:58:01,217 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 20:58:39] 2025-07-27 00:58:02,641 | INFO     | job 6745352191 has state=finished
[2025-07-26 20:58:39] 2025-07-27 00:58:02,641 | INFO     | preparing for final server update for job 6745352191 in state='finished'
[2025-07-26 20:58:39] 2025-07-27 00:58:02,648 | INFO     | this job has now completed (state=finished)
[2025-07-26 20:58:39] 2025-07-27 00:58:02,648 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 20:58:39] 2025-07-27 00:58:02,648 | INFO     | log transfer has been attempted: DONE
[2025-07-26 20:58:39] 2025-07-27 00:58:02,649 | INFO     | job 6745352191 has finished - writing final server update
[2025-07-26 20:58:39] 2025-07-27 00:58:02,649 | INFO     | total number of processed events: 400 (read)
[2025-07-26 20:58:39] 2025-07-27 00:58:02,650 | INFO     | executing command: lscpu
[2025-07-26 20:58:39] 2025-07-27 00:58:02,677 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 20:58:39] 2025-07-27 00:58:02,957 | INFO     | monitor loop #377: job 0:6745352191 is in state 'finished'
[2025-07-26 20:58:39] 2025-07-27 00:58:02,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:58:39] 2025-07-27 00:58:05,461 | INFO     | monitor loop #378: job 0:6745352191 is in state 'finished'
[2025-07-26 20:58:39] 2025-07-27 00:58:05,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:58:39] 2025-07-27 00:58:07,359 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 20:58:39] 2025-07-27 00:58:07,363 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-07-26 20:58:39] 2025-07-27 00:58:07,365 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745352191/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 20:58:39] 2025-07-27 00:58:07,365 | INFO     | extracted standard info from prmon json
[2025-07-26 20:58:39] 2025-07-27 00:58:07,365 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 20:58:39] 2025-07-27 00:58:07,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 20:58:39] 2025-07-27 00:58:07,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 20:58:39] 2025-07-27 00:58:07,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:58:39] 2025-07-27 00:58:07,368 | INFO     | fitting pss+swap vs Time
[2025-07-26 20:58:39] 2025-07-27 00:58:07,368 | INFO     | sum of square deviations: 130793150.0
[2025-07-26 20:58:39] 2025-07-27 00:58:07,368 | INFO     | sum of deviations: -11182558552.0
[2025-07-26 20:58:39] 2025-07-27 00:58:07,368 | INFO     | mean x: 1753575444.0
[2025-07-26 20:58:39] 2025-07-27 00:58:07,368 | INFO     | mean y: 2806783.026666667
[2025-07-26 20:58:39] 2025-07-27 00:58:07,369 | INFO     | -- intersect: 149930078034.45993
[2025-07-26 20:58:39] 2025-07-27 00:58:07,369 | INFO     | intersect: 149930078034.45993
[2025-07-26 20:58:39] 2025-07-27 00:58:07,369 | INFO     | chi2: 0.06083035714419035
[2025-07-26 20:58:39] 2025-07-27 00:58:07,369 | INFO     | -- intersect: 149930078034.45993
[2025-07-26 20:58:39] 2025-07-27 00:58:07,369 | INFO     | current memory leak: -85.50 B/s (using 75 data points, chi2=0.06)
[2025-07-26 20:58:39] 2025-07-27 00:58:07,369 | INFO     | could have reported an average CPU frequency of 2028 MHz (6 samples)
[2025-07-26 20:58:39] 2025-07-27 00:58:07,370 | INFO     | ..............................
[2025-07-26 20:58:39] 2025-07-27 00:58:07,370 | INFO     | . Timing measurements:
[2025-07-26 20:58:39] 2025-07-27 00:58:07,370 | INFO     | . get job = 0 s
[2025-07-26 20:58:39] 2025-07-27 00:58:07,370 | INFO     | . initial setup = 2 s
[2025-07-26 20:58:39] 2025-07-27 00:58:07,370 | INFO     | . payload setup = 9 s
[2025-07-26 20:58:39] 2025-07-27 00:58:07,370 | INFO     | . stage-in = 0 s
[2025-07-26 20:58:39] 2025-07-27 00:58:07,370 | INFO     | . payload execution = 4998 s
[2025-07-26 20:58:39] 2025-07-27 00:58:07,370 | INFO     | . stage-out = 0 s
[2025-07-26 20:58:39] 2025-07-27 00:58:07,370 | INFO     | . log creation = 0 s
[2025-07-26 20:58:39] 2025-07-27 00:58:07,370 | INFO     | ..............................
[2025-07-26 20:58:39] 2025-07-27 00:58:07,898 | INFO     | 
[2025-07-26 20:58:39] 2025-07-27 00:58:07,898 | INFO     | job summary report
[2025-07-26 20:58:39] 2025-07-27 00:58:07,901 | INFO     | --------------------------------------------------
[2025-07-26 20:58:39] 2025-07-27 00:58:07,901 | INFO     | PanDA job id: 6745352191
[2025-07-26 20:58:39] 2025-07-27 00:58:07,901 | INFO     | task id: 45743349
[2025-07-26 20:58:39] 2025-07-27 00:58:07,902 | INFO     | errors: (none)
[2025-07-26 20:58:39] 2025-07-27 00:58:07,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 20:58:39] 2025-07-27 00:58:07,902 | INFO     | pilot state: finished 
[2025-07-26 20:58:39] 2025-07-27 00:58:07,902 | INFO     | transexitcode: 0
[2025-07-26 20:58:39] 2025-07-27 00:58:07,902 | INFO     | exeerrorcode: 0
[2025-07-26 20:58:39] 2025-07-27 00:58:07,902 | INFO     | exeerrordiag: 
[2025-07-26 20:58:39] 2025-07-27 00:58:07,903 | INFO     | exitcode: 0
[2025-07-26 20:58:39] 2025-07-27 00:58:07,903 | INFO     | exitmsg: OK
[2025-07-26 20:58:39] 2025-07-27 00:58:07,903 | INFO     | cpuconsumptiontime: 54170 s
[2025-07-26 20:58:39] 2025-07-27 00:58:07,903 | INFO     | nevents: 400
[2025-07-26 20:58:39] 2025-07-27 00:58:07,903 | INFO     | neventsw: 0
[2025-07-26 20:58:39] 2025-07-27 00:58:07,903 | INFO     | pid: 16096
[2025-07-26 20:58:39] 2025-07-27 00:58:07,903 | INFO     | pgrp: 16096
[2025-07-26 20:58:39] 2025-07-27 00:58:07,903 | INFO     | corecount: 12
[2025-07-26 20:58:39] 2025-07-27 00:58:07,904 | INFO     | event service: False
[2025-07-26 20:58:39] 2025-07-27 00:58:07,904 | INFO     | sizes: {0: 2397475, 1: 2397503, 6: 2397765, 11: 2397793, 5012: 2424067, 5013: 2433065, 5015: 2433249, 5021: 2433443}
[2025-07-26 20:58:39] 2025-07-27 00:58:07,904 | INFO     | --------------------------------------------------
[2025-07-26 20:58:39] 2025-07-27 00:58:07,904 | INFO     | 
[2025-07-26 20:58:39] 2025-07-27 00:58:07,904 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 20:58:39] 2025-07-27 00:58:07,928 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,929 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,929 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,929 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,930 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,930 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,930 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,931 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 20:58:39] 2025-07-27 00:58:07,932 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,932 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 20:58:39] 2025-07-27 00:58:07,932 | INFO     | job 6745352191 has completed (purged errors)
[2025-07-26 20:58:39] 2025-07-27 00:58:07,932 | INFO     | overall cleanup function is called
[2025-07-26 20:58:39] 2025-07-27 00:58:08,940 | INFO     | --- collectZombieJob: --- 10, [16096]
[2025-07-26 20:58:39] 2025-07-27 00:58:08,940 | INFO     | zombie collector waiting for pid 16096
[2025-07-26 20:58:39] 2025-07-27 00:58:08,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 20:58:39] 2025-07-27 00:58:08,941 | INFO     | collected zombie processes
[2025-07-26 20:58:39] 2025-07-27 00:58:08,941 | INFO     | will attempt to kill all subprocesses of pid=16096
[2025-07-26 20:58:39] 2025-07-27 00:58:09,030 | INFO     | process IDs to be killed: [16096] (in reverse order)
[2025-07-26 20:58:39] 2025-07-27 00:58:09,082 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 20:58:39] 2025-07-27 00:58:09,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 20:58:39] 2025-07-27 00:58:09,086 | INFO     | did not find any defunct processes belonging to 16096
[2025-07-26 20:58:39] 2025-07-27 00:58:09,088 | INFO     | did not find any defunct processes belonging to 16096
[2025-07-26 20:58:39] 2025-07-27 00:58:09,088 | INFO     | ready for new job
[2025-07-26 20:58:39] 2025-07-27 00:58:09,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 20:58:39] 2025-07-27 00:58:09,089 | INFO     | ***************************************
[2025-07-26 20:58:39] 2025-07-27 00:58:09,089 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 20:58:39] 2025-07-27 00:58:09,090 | INFO     | ***************************************
[2025-07-26 20:58:39] 2025-07-27 00:58:09,090 | INFO     | 
[2025-07-26 20:58:39] 2025-07-27 00:58:09,090 | INFO     | architecture information:
[2025-07-26 20:58:39] 2025-07-27 00:58:09,091 | INFO     | executing command: cat /etc/os-release
[2025-07-26 20:58:39] 2025-07-27 00:58:09,107 | INFO     | cat /etc/os-release:
[2025-07-26 20:58:39] NAME="CentOS Linux"
[2025-07-26 20:58:39] VERSION="7 (Core)"
[2025-07-26 20:58:39] ID="centos"
[2025-07-26 20:58:39] ID_LIKE="rhel fedora"
[2025-07-26 20:58:39] VERSION_ID="7"
[2025-07-26 20:58:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 20:58:39] ANSI_COLOR="0;31"
[2025-07-26 20:58:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 20:58:39] HOME_URL="https://www.centos.org/"
[2025-07-26 20:58:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 20:58:39] 
[2025-07-26 20:58:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 20:58:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 20:58:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 20:58:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 20:58:39] 
[2025-07-26 20:58:39] 2025-07-27 00:58:09,107 | INFO     | ***************************************
[2025-07-26 20:58:39] 2025-07-27 00:58:09,610 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 20:58:39] 2025-07-27 00:58:09,627 | INFO     | sufficient remaining disk space (29509025792 B)
[2025-07-26 20:58:39] 2025-07-27 00:58:09,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 20:58:39] 2025-07-27 00:58:09,627 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 20:58:39] 2025-07-27 00:58:09,627 | INFO     | update_server=False
[2025-07-26 20:58:39] 2025-07-27 00:58:09,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 20:58:39] 2025-07-27 00:58:09,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:58:39] 2025-07-27 00:58:09,628 | INFO     | aborting loop
[2025-07-26 20:58:39] 2025-07-27 00:58:09,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 20:58:39] 2025-07-27 00:58:09,753 | INFO     | all payload control threads have been joined
[2025-07-26 20:58:39] 2025-07-27 00:58:09,813 | INFO     | all job control threads have been joined
[2025-07-26 20:58:39] 2025-07-27 00:58:09,869 | INFO     | all data control threads have been joined
[2025-07-26 20:58:39] 2025-07-27 00:58:10,633 | INFO     | [job] retrieve thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:10,634 | INFO     | [job] job monitor thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:10,759 | INFO     | [payload] control thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:10,819 | INFO     | [job] control thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:10,875 | INFO     | [data] control thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:11,113 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:11,237 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:11,245 | INFO     | [payload] failed_post thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:11,249 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:11,697 | INFO     | [data] copytool_out thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:11,798 | INFO     | [data] copytool_in thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:11,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 20:58:39] 2025-07-27 00:58:12,021 | INFO     | [job] validate thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:12,127 | INFO     | [payload] validate_post thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:12,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:58:39] 2025-07-27 00:58:13,471 | INFO     | [job] queue monitor thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:15,815 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:20,388 | INFO     | job.realtimelogging is not enabled
[2025-07-26 20:58:39] 2025-07-27 00:58:21,393 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 20:58:39] 2025-07-27 00:58:22,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083597637440)>', '<ExcThread(monitor, started 140083009140480)>']
[2025-07-26 20:58:39] 2025-07-27 00:58:27,761 | INFO     | all workflow threads have been joined
[2025-07-26 20:58:39] 2025-07-27 00:58:27,761 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 20:58:39] 2025-07-27 00:58:27,761 | INFO     | traces error code: 0
[2025-07-26 20:58:39] 2025-07-27 00:58:27,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 20:58:39] 2025-07-27 00:58:39,321 | INFO     | PID=9678 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 20:58:39] 2025-07-27 00:58:39,322 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 20:58:39] 2025-07-27 00:58:39,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 20:58:39] 2025-07-27 00:58:39,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 20:58:39] 2025-07-27 00:58:39,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 20:58:39] 2025-07-27 00:58:39,322 | INFO     | [monitor] control thread has ended
[2025-07-26 20:58:39] 2025-07-27 00:58:39,415 [wrapper] ==== pilot stdout END ====
[2025-07-26 20:58:39] 2025-07-27 00:58:39,418 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 20:58:39] 2025-07-27 00:58:39,422 [wrapper] pilotpid: 9678
[2025-07-26 20:58:39] 2025-07-27 00:58:39,425 [wrapper] Pilot exit status: 0
[2025-07-26 20:58:39] 2025-07-27 00:58:39,441 [wrapper] pandaids: 6745352191
[2025-07-26 20:58:39] 2025-07-27 00:58:39,481 [wrapper] cleanup supervisor_pilot 10424 9679
[2025-07-26 20:58:39] 2025-07-27 00:58:39,485 [wrapper] Test setup, not cleaning
[2025-07-26 20:58:39] 2025-07-27 00:58:39,489 [wrapper] apfmon messages muted
[2025-07-26 20:58:39] 2025-07-27 00:58:39,492 [wrapper] ==== wrapper stdout END ====
[2025-07-26 20:58:39] 2025-07-27 00:58:39,496 [wrapper] ==== wrapper stderr END ====
[2025-07-26 20:58:39]  *** Error codes and diagnostics ***
[2025-07-26 20:58:39]     "exeErrorCode": 0,
[2025-07-26 20:58:39]     "exeErrorDiag": "",
[2025-07-26 20:58:39]     "pilotErrorCode": 0,
[2025-07-26 20:58:39]     "pilotErrorDiag": "",
[2025-07-26 20:58:39]  *** Listing of results directory ***
[2025-07-26 20:58:39] total 357248
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 14:15 pilot3.tar.gz
[2025-07-26 20:58:39] -rwx------ 1 boincer umatlas     36292 Jul 26 14:21 runpilot2-wrapper.sh
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 14:21 queuedata.json
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas       100 Jul 26 19:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 20:58:39] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 19:33 run_atlas
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas       105 Jul 26 19:33 job.xml
[2025-07-26 20:58:39] -rw-r--r-- 2 boincer umatlas 147436670 Jul 26 19:33 EVNT.45743347._002382.pool.root.1
[2025-07-26 20:58:39] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 19:33 start_atlas.sh
[2025-07-26 20:58:39] drwxrwx--x 2 boincer umatlas      4096 Jul 26 19:33 shared
[2025-07-26 20:58:39] -rw-r--r-- 2 boincer umatlas    542898 Jul 26 19:33 input.tar.gz
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas         0 Jul 26 19:33 boinc_lockfile
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 19:33 pandaJob.out
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas    980117 Jul 26 19:34 agis_schedconf.cvmfs.json
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas   1593052 Jul 26 19:34 agis_ddmendpoints.agis.ALL.json
[2025-07-26 20:58:39] drwx------ 4 boincer umatlas      4096 Jul 26 19:34 pilot3
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas      5868 Jul 26 20:55 init_data.xml
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas 212825721 Jul 26 20:57 HITS.45743349._042261.pool.root.1
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas       529 Jul 26 20:57 boinc_task_state.xml
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas      1049 Jul 26 20:57 memory_monitor_summary.json
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas    367486 Jul 26 20:57 log.45743349._042261.job.log.tgz.1
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas      7856 Jul 26 20:58 heartbeat.json
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 20:58 boinc_mmap_file
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas        27 Jul 26 20:58 wrapper_checkpoint.txt
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas       744 Jul 26 20:58 pilotlog.txt
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas        95 Jul 26 20:58 pilot_heartbeat.json
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas    478002 Jul 26 20:58 log.45743349._042261.job.log.1
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas       357 Jul 26 20:58 output.list
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas       620 Jul 26 20:58 runtime_log
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas    860160 Jul 26 20:58 result.tar.gz
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 20:58 runtime_log.err
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas       659 Jul 26 20:58 cecMDmxhyz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmNE1KDmtRTD8n.diag
[2025-07-26 20:58:39] -rw-r--r-- 1 boincer umatlas     21560 Jul 26 20:58 stderr.txt
[2025-07-26 20:58:39] HITS file was successfully produced:
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas 212825721 Jul 26 20:57 shared/HITS.pool.root.1
[2025-07-26 20:58:39]  *** Contents of shared directory: ***
[2025-07-26 20:58:39] total 353216
[2025-07-26 20:58:39] -rw-r--r-- 2 boincer umatlas 147436670 Jul 26 19:33 ATLAS.root_0
[2025-07-26 20:58:39] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 19:33 start_atlas.sh
[2025-07-26 20:58:39] -rw-r--r-- 2 boincer umatlas    542898 Jul 26 19:33 input.tar.gz
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas 212825721 Jul 26 20:57 HITS.pool.root.1
[2025-07-26 20:58:39] -rw------- 1 boincer umatlas    860160 Jul 26 20:58 result.tar.gz
20:58:40 (6020): run_atlas exited; CPU time 54139.826062
20:58:40 (6020): called boinc_finish(0)

</stderr_txt>
]]>

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