Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:30:10 (4032785): wrapper (7.7.26015): starting
12:30:10 (4032785): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 12:30:10] Arguments: --nthreads 4
[2025-07-27 12:30:10] Threads: 4
[2025-07-27 12:30:10] Checking for CVMFS
[2025-07-27 12:30:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:30:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:30:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:30:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:30:10] 2.9.2.0 2645308 3975 93948 148809 2 57 35145797 36864001 0 130560 0 3670573 99.992 142301 2295 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 12:30:10] CVMFS is ok
[2025-07-27 12:30:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:30:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:30:10] Further information can be found at the LHC@home message board.
[2025-07-27 12:30:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:30:10] Checking for apptainer binary...
[2025-07-27 12:30:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 12:30:10] Running /usr/bin/apptainer --version
[2025-07-27 12:30:10] apptainer version 1.4.1-1.1
[2025-07-27 12:30:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:30:10] thA350
[2025-07-27 12:30:10] apptainer works
[2025-07-27 12:30:10] Set ATHENA_PROC_NUMBER=4
[2025-07-27 12:30:10] Set ATHENA_CORE_NUMBER=4
[2025-07-27 12:30:10] Starting ATLAS job with PandaID=6745351564
[2025-07-27 12:30:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:44:20]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:44:20]  mtime=0
[2025-07-27 13:44:20]  protocol_id=None
[2025-07-27 13:44:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 13:44:20]  replicas=None
[2025-07-27 13:44:20]  scope=mc23_13p6TeV
[2025-07-27 13:44:20]  status=None
[2025-07-27 13:44:20]  status_code=0
[2025-07-27 13:44:20]  storage_token=
[2025-07-27 13:44:20]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745351564/log.45743349._042151.job.log.tgz.1
[2025-07-27 13:44:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/ef/log.45743349._042151.job.log.tgz.1
[2025-07-27 13:44:20]  workdir=None
[2025-07-27 13:44:20] ]
[2025-07-27 13:44:20] 2025-07-27 11:43:42,618 | INFO     | transferring file log.45743349._042151.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745351564/log.45743349._042151.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 13:44:20] 2025-07-27 11:43:42,618 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745351564/log.45743349._042151.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0421
[2025-07-27 13:44:20] 2025-07-27 11:43:42,632 | INFO     | adding to output.list: log.45743349._042151.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/ef/log.45743349._042151.job.log.tg
[2025-07-27 13:44:20] 2025-07-27 11:43:42,632 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 13:44:20] 2025-07-27 11:43:42,632 | INFO     | summary of transferred files:
[2025-07-27 13:44:20] 2025-07-27 11:43:42,632 | INFO     |  -- lfn=log.45743349._042151.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 13:44:20] 2025-07-27 11:43:42,632 | INFO     | stage-out finished correctly
[2025-07-27 13:44:20] 2025-07-27 11:43:42,661 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 13:44:20] 2025-07-27 11:43:44,531 | INFO     | job 6745351564 has state=finished
[2025-07-27 13:44:20] 2025-07-27 11:43:44,531 | INFO     | preparing for final server update for job 6745351564 in state='finished'
[2025-07-27 13:44:20] 2025-07-27 11:43:44,532 | INFO     | this job has now completed (state=finished)
[2025-07-27 13:44:20] 2025-07-27 11:43:44,532 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 13:44:20] 2025-07-27 11:43:44,532 | INFO     | log transfer has been attempted: DONE
[2025-07-27 13:44:20] 2025-07-27 11:43:44,532 | INFO     | job 6745351564 has finished - writing final server update
[2025-07-27 13:44:20] 2025-07-27 11:43:44,532 | INFO     | total number of processed events: 400 (read)
[2025-07-27 13:44:20] 2025-07-27 11:43:44,533 | INFO     | executing command: lscpu
[2025-07-27 13:44:20] 2025-07-27 11:43:44,549 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 13:44:20] 2025-07-27 11:43:45,420 | WARNING  | process 4043102 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 13:44:20] 2025-07-27 11:43:45,420 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745351564/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:44:20] 2025-07-27 11:43:45,476 | INFO     | number of running child processes to parent process 4043102: 1
[2025-07-27 13:44:20] 2025-07-27 11:43:45,476 | INFO     | maximum number of monitored processes: 6
[2025-07-27 13:44:20] 2025-07-27 11:43:47,979 | INFO     | monitor loop #340: job 0:6745351564 is in state 'finished'
[2025-07-27 13:44:20] 2025-07-27 11:43:47,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:44:20] 2025-07-27 11:43:48,359 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 13:44:20] 2025-07-27 11:43:48,360 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3513.2111249999994
[2025-07-27 13:44:20] 2025-07-27 11:43:48,361 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745351564/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:44:20] 2025-07-27 11:43:48,361 | INFO     | extracted standard info from prmon json
[2025-07-27 13:44:20] 2025-07-27 11:43:48,361 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:44:20] 2025-07-27 11:43:48,361 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:44:20] 2025-07-27 11:43:48,361 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:44:20] 2025-07-27 11:43:48,361 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:44:20] 2025-07-27 11:43:48,362 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:44:20] 2025-07-27 11:43:48,362 | INFO     | sum of square deviations: 85136480.0
[2025-07-27 13:44:20] 2025-07-27 11:43:48,362 | INFO     | sum of deviations: -9849986894.999998
[2025-07-27 13:44:20] 2025-07-27 11:43:48,362 | INFO     | mean x: 1753614494.0
[2025-07-27 13:44:20] 2025-07-27 11:43:48,362 | INFO     | mean y: 2532618.3846153845
[2025-07-27 13:44:20] 2025-07-27 11:43:48,362 | INFO     | -- intersect: 202889471152.6305
[2025-07-27 13:44:20] 2025-07-27 11:43:48,362 | INFO     | intersect: 202889471152.6305
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | chi2: 0.052264352457430524
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | -- intersect: 202889471152.6305
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | current memory leak: -115.70 B/s (using 65 data points, chi2=0.05)
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | could have reported an average CPU frequency of 3774 MHz (6 samples)
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | ..............................
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | . Timing measurements:
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | . get job = 0 s
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | . initial setup = 1 s
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | . payload setup = 3 s
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | . stage-in = 0 s
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | . payload execution = 4385 s
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | . stage-out = 0 s
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | . log creation = 0 s
[2025-07-27 13:44:20] 2025-07-27 11:43:48,363 | INFO     | ..............................
[2025-07-27 13:44:20] 2025-07-27 11:43:48,393 | INFO     | 
[2025-07-27 13:44:20] 2025-07-27 11:43:48,393 | INFO     | job summary report
[2025-07-27 13:44:20] 2025-07-27 11:43:48,393 | INFO     | --------------------------------------------------
[2025-07-27 13:44:20] 2025-07-27 11:43:48,393 | INFO     | PanDA job id: 6745351564
[2025-07-27 13:44:20] 2025-07-27 11:43:48,393 | INFO     | task id: 45743349
[2025-07-27 13:44:20] 2025-07-27 11:43:48,393 | INFO     | errors: (none)
[2025-07-27 13:44:20] 2025-07-27 11:43:48,393 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:44:20] 2025-07-27 11:43:48,393 | INFO     | pilot state: finished 
[2025-07-27 13:44:20] 2025-07-27 11:43:48,393 | INFO     | transexitcode: 0
[2025-07-27 13:44:20] 2025-07-27 11:43:48,393 | INFO     | exeerrorcode: 0
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | exeerrordiag: 
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | exitcode: 0
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | exitmsg: OK
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | cpuconsumptiontime: 16647 s
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | nevents: 400
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | neventsw: 0
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | pid: 4043102
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | pgrp: 4043102
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | corecount: 4
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | event service: False
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | sizes: {0: 2397478, 2: 2397740, 10: 2397768, 4392: 2424005, 4393: 2433065, 4399: 2433203}
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | --------------------------------------------------
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | 
[2025-07-27 13:44:20] 2025-07-27 11:43:48,394 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 13:44:20] 2025-07-27 11:43:48,407 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,407 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,407 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | job 6745351564 has completed (purged errors)
[2025-07-27 13:44:20] 2025-07-27 11:43:48,408 | INFO     | overall cleanup function is called
[2025-07-27 13:44:20] 2025-07-27 11:43:49,415 | INFO     | --- collectZombieJob: --- 10, [4043102]
[2025-07-27 13:44:20] 2025-07-27 11:43:49,415 | INFO     | zombie collector waiting for pid 4043102
[2025-07-27 13:44:20] 2025-07-27 11:43:49,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:44:20] 2025-07-27 11:43:49,415 | INFO     | collected zombie processes
[2025-07-27 13:44:20] 2025-07-27 11:43:49,415 | INFO     | will attempt to kill all subprocesses of pid=4043102
[2025-07-27 13:44:20] 2025-07-27 11:43:49,457 | INFO     | process IDs to be killed: [4043102] (in reverse order)
[2025-07-27 13:44:20] 2025-07-27 11:43:49,482 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:44:20] 2025-07-27 11:43:49,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:44:20] 2025-07-27 11:43:49,483 | INFO     | did not find any defunct processes belonging to 4043102
[2025-07-27 13:44:20] 2025-07-27 11:43:49,484 | INFO     | did not find any defunct processes belonging to 4043102
[2025-07-27 13:44:20] 2025-07-27 11:43:49,484 | INFO     | ready for new job
[2025-07-27 13:44:20] 2025-07-27 11:43:49,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:44:20] 2025-07-27 11:43:49,485 | INFO     | ***************************************
[2025-07-27 13:44:20] 2025-07-27 11:43:49,485 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:44:20] 2025-07-27 11:43:49,485 | INFO     | ***************************************
[2025-07-27 13:44:20] 2025-07-27 11:43:49,485 | INFO     | 
[2025-07-27 13:44:20] 2025-07-27 11:43:49,486 | INFO     | architecture information:
[2025-07-27 13:44:20] 2025-07-27 11:43:49,486 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:44:20] 2025-07-27 11:43:49,494 | INFO     | cat /etc/os-release:
[2025-07-27 13:44:20] NAME="CentOS Linux"
[2025-07-27 13:44:20] VERSION="7 (Core)"
[2025-07-27 13:44:20] ID="centos"
[2025-07-27 13:44:20] ID_LIKE="rhel fedora"
[2025-07-27 13:44:20] VERSION_ID="7"
[2025-07-27 13:44:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:44:20] ANSI_COLOR="0;31"
[2025-07-27 13:44:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:44:20] HOME_URL="https://www.centos.org/"
[2025-07-27 13:44:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:44:20] 
[2025-07-27 13:44:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:44:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:44:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:44:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:44:20] 
[2025-07-27 13:44:20] 2025-07-27 11:43:49,495 | INFO     | ***************************************
[2025-07-27 13:44:20] 2025-07-27 11:43:49,998 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 13:44:20] 2025-07-27 11:43:50,011 | INFO     | sufficient remaining disk space (364720947200 B)
[2025-07-27 13:44:20] 2025-07-27 11:43:50,011 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:44:20] 2025-07-27 11:43:50,011 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:44:20] 2025-07-27 11:43:50,011 | INFO     | update_server=False
[2025-07-27 13:44:20] 2025-07-27 11:43:50,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:44:20] 2025-07-27 11:43:50,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:44:20] 2025-07-27 11:43:50,339 | INFO     | all job control threads have been joined
[2025-07-27 13:44:20] 2025-07-27 11:43:50,483 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 13:44:20] 2025-07-27 11:43:50,483 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 13:44:20] 2025-07-27 11:43:50,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:44:20] 2025-07-27 11:43:50,483 | INFO     | will abort loop
[2025-07-27 13:44:20] 2025-07-27 11:43:50,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:44:20] 2025-07-27 11:43:50,711 | INFO     | all data control threads have been joined
[2025-07-27 13:44:20] 2025-07-27 11:43:51,017 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:51,017 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:51,278 | INFO     | all payload control threads have been joined
[2025-07-27 13:44:20] 2025-07-27 11:43:51,288 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:51,345 | INFO     | [job] control thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:51,489 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:51,716 | INFO     | [data] control thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:51,977 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:52,110 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:52,266 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:52,283 | INFO     | [payload] control thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:52,326 | INFO     | [job] validate thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:52,394 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:52,424 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:52,680 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:43:53,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:44:20] 2025-07-27 11:43:57,206 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:44:01,017 | INFO     | job.realtimelogging is not enabled
[2025-07-27 13:44:20] 2025-07-27 11:44:02,023 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:44:20] 2025-07-27 11:44:03,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140141225965376)>', '<ExcThread(monitor, started 140140731156224)>']
[2025-07-27 13:44:20] 2025-07-27 11:44:08,533 | INFO     | all workflow threads have been joined
[2025-07-27 13:44:20] 2025-07-27 11:44:08,533 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:44:20] 2025-07-27 11:44:08,533 | INFO     | traces error code: 0
[2025-07-27 13:44:20] 2025-07-27 11:44:08,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:44:20] 2025-07-27 11:44:20,777 | INFO     | PID=4036494 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 13:44:20] 2025-07-27 11:44:20,777 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:44:20] 2025-07-27 11:44:20,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:44:20] 2025-07-27 11:44:20,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:44:20] 2025-07-27 11:44:20,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:44:20] 2025-07-27 11:44:20,777 | INFO     | [monitor] control thread has ended
[2025-07-27 13:44:20] 2025-07-27 11:44:20,822 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:44:20] 2025-07-27 11:44:20,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:44:20] 2025-07-27 11:44:20,827 [wrapper] pilotpid: 4036494
[2025-07-27 13:44:20] 2025-07-27 11:44:20,830 [wrapper] Pilot exit status: 0
[2025-07-27 13:44:20] 2025-07-27 11:44:20,837 [wrapper] pandaids: 6745351564
[2025-07-27 13:44:20] 2025-07-27 11:44:20,853 [wrapper] cleanup supervisor_pilot 4052937 4036495
[2025-07-27 13:44:20] 2025-07-27 11:44:20,856 [wrapper] Test setup, not cleaning
[2025-07-27 13:44:20] 2025-07-27 11:44:20,858 [wrapper] apfmon messages muted
[2025-07-27 13:44:20] 2025-07-27 11:44:20,861 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:44:20] 2025-07-27 11:44:20,863 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:44:20]  *** Error codes and diagnostics ***
[2025-07-27 13:44:20]     "exeErrorCode": 0,
[2025-07-27 13:44:20]     "exeErrorDiag": "",
[2025-07-27 13:44:20]     "pilotErrorCode": 0,
[2025-07-27 13:44:20]     "pilotErrorDiag": "",
[2025-07-27 13:44:20]  *** Listing of results directory ***
[2025-07-27 13:44:20] total 352460
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc    530466 Jul 26 19:41 pilot3.tar.gz
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc      5112 Jul 26 20:12 queuedata.json
[2025-07-27 13:44:20] -rwx------ 1 boinc boinc     36292 Jul 26 20:12 runpilot2-wrapper.sh
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc       100 Jul 27 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:44:20] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 12:30 run_atlas
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc       105 Jul 27 12:30 job.xml
[2025-07-27 13:44:20] -rw-r--r-- 2 boinc boinc 146159133 Jul 27 12:30 EVNT.45743347._002375.pool.root.1
[2025-07-27 13:44:20] -rw-r--r-- 2 boinc boinc    542900 Jul 27 12:30 input.tar.gz
[2025-07-27 13:44:20] -rw-r--r-- 2 boinc boinc     15095 Jul 27 12:30 start_atlas.sh
[2025-07-27 13:44:20] drwxrwx--x 2 boinc boinc      4096 Jul 27 12:30 shared
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc         0 Jul 27 12:30 boinc_setup_complete
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc      6524 Jul 27 12:30 init_data.xml
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc         0 Jul 27 12:30 boinc_lockfile
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc      2563 Jul 27 12:30 pandaJob.out
[2025-07-27 13:44:20] -rw------- 1 boinc boinc    980117 Jul 27 12:30 agis_schedconf.cvmfs.json
[2025-07-27 13:44:20] -rw------- 1 boinc boinc   1593052 Jul 27 12:30 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:44:20] drwx------ 4 boinc boinc      4096 Jul 27 12:30 pilot3
[2025-07-27 13:44:20] -rw------- 1 boinc boinc 209540662 Jul 27 13:43 HITS.45743349._042151.pool.root.1
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc       529 Jul 27 13:43 boinc_task_state.xml
[2025-07-27 13:44:20] -rw------- 1 boinc boinc        95 Jul 27 13:43 pilot_heartbeat.json
[2025-07-27 13:44:20] -rw------- 1 boinc boinc      1017 Jul 27 13:43 memory_monitor_summary.json
[2025-07-27 13:44:20] -rw------- 1 boinc boinc    235133 Jul 27 13:43 log.45743349._042151.job.log.tgz.1
[2025-07-27 13:44:20] -rw------- 1 boinc boinc      7752 Jul 27 13:43 heartbeat.json
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc        27 Jul 27 13:44 wrapper_checkpoint.txt
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc      8192 Jul 27 13:44 boinc_mmap_file
[2025-07-27 13:44:20] -rw------- 1 boinc boinc       747 Jul 27 13:44 pilotlog.txt
[2025-07-27 13:44:20] -rw------- 1 boinc boinc    435618 Jul 27 13:44 log.45743349._042151.job.log.1
[2025-07-27 13:44:20] -rw------- 1 boinc boinc       357 Jul 27 13:44 output.list
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc       620 Jul 27 13:44 runtime_log
[2025-07-27 13:44:20] -rw------- 1 boinc boinc    686080 Jul 27 13:44 result.tar.gz
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc      8734 Jul 27 13:44 runtime_log.err
[2025-07-27 13:44:20] -rw------- 1 boinc boinc       658 Jul 27 13:44 gW8MDm7Yyz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0C1KDmkUtgQn.diag
[2025-07-27 13:44:20] -rw-r--r-- 1 boinc boinc     21702 Jul 27 13:44 stderr.txt
[2025-07-27 13:44:20] HITS file was successfully produced:
[2025-07-27 13:44:20] -rw------- 1 boinc boinc 209540662 Jul 27 13:43 shared/HITS.pool.root.1
[2025-07-27 13:44:20]  *** Contents of shared directory: ***
[2025-07-27 13:44:20] total 348596
[2025-07-27 13:44:20] -rw-r--r-- 2 boinc boinc 146159133 Jul 27 12:30 ATLAS.root_0
[2025-07-27 13:44:20] -rw-r--r-- 2 boinc boinc    542900 Jul 27 12:30 input.tar.gz
[2025-07-27 13:44:20] -rw-r--r-- 2 boinc boinc     15095 Jul 27 12:30 start_atlas.sh
[2025-07-27 13:44:20] -rw------- 1 boinc boinc 209540662 Jul 27 13:43 HITS.pool.root.1
[2025-07-27 13:44:20] -rw------- 1 boinc boinc    686080 Jul 27 13:44 result.tar.gz
13:44:22 (4032785): run_atlas exited; CPU time 16660.361976
13:44:22 (4032785): called boinc_finish(0)

</stderr_txt>
]]>

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