Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:21:36 (3911909): wrapper (7.7.26015): starting
19:21:36 (3911909): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 19:21:36] Arguments: --nthreads 8
[2025-07-26 19:21:36] Threads: 8
[2025-07-26 19:21:36] Checking for CVMFS
[2025-07-26 19:21:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 19:21:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 19:21:37] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 19:21:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 19:21:39] 2.13.0.0 97685 26448 419552 148793 1 65 29714890 32935937 18243 16776704 0 62442504 99.615 98564931 29631 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 19:21:39] CVMFS is ok
[2025-07-26 19:21:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 19:21:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 19:21:39] Further information can be found at the LHC@home message board.
[2025-07-26 19:21:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 19:21:39] Checking for apptainer binary...
[2025-07-26 19:21:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 19:21:39] Running /usr/bin/apptainer --version
[2025-07-26 19:21:39] apptainer version 1.4.1-1.el9
[2025-07-26 19:21:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 19:21:40] c6-4-5-1.aglt2.org
[2025-07-26 19:21:40] apptainer works
[2025-07-26 19:21:40] Set ATHENA_PROC_NUMBER=8
[2025-07-26 19:21:40] Set ATHENA_CORE_NUMBER=8
[2025-07-26 19:21:41] Starting ATLAS job with PandaID=6745352172
[2025-07-26 19:21:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 01:12:02]  *** The last 200 lines of the pilot log: ***
[2025-07-27 01:12:02] 2025-07-27 05:11:17,202 | INFO     | monitor loop #1192: job 0:6745352172 is in state 'finished'
[2025-07-27 01:12:02] 2025-07-27 05:11:17,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:12:02] 2025-07-27 05:11:19,707 | INFO     | monitor loop #1193: job 0:6745352172 is in state 'finished'
[2025-07-27 01:12:02] 2025-07-27 05:11:19,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:12:02] 2025-07-27 05:11:21,825 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 01:12:02] 2025-07-27 05:11:21,834 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2770.343093750001
[2025-07-27 01:12:02] 2025-07-27 05:11:21,847 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745352172/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 01:12:02] 2025-07-27 05:11:21,848 | INFO     | extracted standard info from prmon json
[2025-07-27 01:12:02] 2025-07-27 05:11:21,848 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 01:12:02] 2025-07-27 05:11:21,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 01:12:02] 2025-07-27 05:11:21,864 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 01:12:02] 2025-07-27 05:11:21,864 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 01:12:02] 2025-07-27 05:11:21,901 | INFO     | fitting pss+swap vs Time
[2025-07-27 01:12:02] 2025-07-27 05:11:21,902 | INFO     | sum of square deviations: 12080657766.041275
[2025-07-27 01:12:02] 2025-07-27 05:11:21,941 | INFO     | sum of deviations: 66646438001.11209
[2025-07-27 01:12:02] 2025-07-27 05:11:21,941 | INFO     | mean x: 1753582690.5457227
[2025-07-27 01:12:02] 2025-07-27 05:11:21,941 | INFO     | mean y: 2147956.766961652
[2025-07-27 01:12:02] 2025-07-27 05:11:21,941 | INFO     | -- intersect: -9671997468.807503
[2025-07-27 01:12:02] 2025-07-27 05:11:21,941 | INFO     | intersect: -9671997468.807503
[2025-07-27 01:12:02] 2025-07-27 05:11:21,942 | INFO     | chi2: 4.849635184214168
[2025-07-27 01:12:02] 2025-07-27 05:11:21,942 | INFO     | sum of square deviations: 11553952439.41316
[2025-07-27 01:12:02] 2025-07-27 05:11:21,973 | INFO     | sum of deviations: 84100672211.74252
[2025-07-27 01:12:02] 2025-07-27 05:11:21,974 | INFO     | mean x: 1753582538.0419161
[2025-07-27 01:12:02] 2025-07-27 05:11:21,974 | INFO     | mean y: 2152943.5898203594
[2025-07-27 01:12:02] 2025-07-27 05:11:21,974 | INFO     | -- intersect: -12762091240.505962
[2025-07-27 01:12:02] 2025-07-27 05:11:21,974 | INFO     | intersect: -12762091240.505962
[2025-07-27 01:12:02] 2025-07-27 05:11:21,999 | INFO     | chi2: 4.144340921426346
[2025-07-27 01:12:02] 2025-07-27 05:11:21,999 | INFO     | current chi2=4.144340921426346 (change=14.543243687351866 %)
[2025-07-27 01:12:02] 2025-07-27 05:11:21,999 | INFO     | right removable region: 333
[2025-07-27 01:12:02] 2025-07-27 05:11:22,000 | INFO     | sum of square deviations: 11553921697.029861
[2025-07-27 01:12:02] 2025-07-27 05:11:22,034 | INFO     | sum of deviations: -12831418811.347294
[2025-07-27 01:12:02] 2025-07-27 05:11:22,034 | INFO     | mean x: 1753582843.0538921
[2025-07-27 01:12:02] 2025-07-27 05:11:22,034 | INFO     | mean y: 2170924.0748502994
[2025-07-27 01:12:02] 2025-07-27 05:11:22,034 | INFO     | -- intersect: 1949644385.4366186
[2025-07-27 01:12:02] 2025-07-27 05:11:22,034 | INFO     | intersect: 1949644385.4366186
[2025-07-27 01:12:02] 2025-07-27 05:11:22,035 | INFO     | chi2: 1.9803274416296976
[2025-07-27 01:12:02] 2025-07-27 05:11:22,035 | INFO     | current chi2=1.9803274416296976 (change=59.16543479237832 %)
[2025-07-27 01:12:02] 2025-07-27 05:11:22,036 | INFO     | sum of square deviations: 11042782047.319208
[2025-07-27 01:12:02] 2025-07-27 05:11:22,075 | INFO     | sum of deviations: -43666966442.255325
[2025-07-27 01:12:02] 2025-07-27 05:11:22,076 | INFO     | mean x: 1753582995.5531914
[2025-07-27 01:12:02] 2025-07-27 05:11:22,076 | INFO     | mean y: 2180108.52887538
[2025-07-27 01:12:02] 2025-07-27 05:11:22,076 | INFO     | -- intersect: 6936451698.09811
[2025-07-27 01:12:02] 2025-07-27 05:11:22,076 | INFO     | intersect: 6936451698.09811
[2025-07-27 01:12:02] 2025-07-27 05:11:22,076 | INFO     | chi2: 1.5261633894599769
[2025-07-27 01:12:02] 2025-07-27 05:11:22,076 | INFO     | current chi2=1.5261633894599769 (change=22.933785727675897 %)
[2025-07-27 01:12:02] 2025-07-27 05:11:22,077 | INFO     | left removable region: 20
[2025-07-27 01:12:02] 2025-07-27 05:11:22,077 | INFO     | sum of square deviations: 9508805767.667795
[2025-07-27 01:12:02] 2025-07-27 05:11:22,107 | INFO     | sum of deviations: -41992359534.102234
[2025-07-27 01:12:02] 2025-07-27 05:11:22,108 | INFO     | mean x: 1753583117.5431309
[2025-07-27 01:12:02] 2025-07-27 05:11:22,108 | INFO     | mean y: 2191125.8594249203
[2025-07-27 01:12:02] 2025-07-27 05:11:22,108 | INFO     | -- intersect: 7746285867.513173
[2025-07-27 01:12:02] 2025-07-27 05:11:22,108 | INFO     | intersect: 7746285867.513173
[2025-07-27 01:12:02] 2025-07-27 05:11:22,108 | INFO     | chi2: 0.668911886845835
[2025-07-27 01:12:02] 2025-07-27 05:11:22,109 | INFO     | -- intersect: 7746285867.513173
[2025-07-27 01:12:02] 2025-07-27 05:11:22,109 | INFO     | current memory leak: -4.42 B/s (using 313 data points, chi2=0.67)
[2025-07-27 01:12:02] 2025-07-27 05:11:22,109 | INFO     | could have reported an average CPU frequency of 2728 MHz (15 samples)
[2025-07-27 01:12:02] 2025-07-27 05:11:22,110 | INFO     | ..............................
[2025-07-27 01:12:02] 2025-07-27 05:11:22,110 | INFO     | . Timing measurements:
[2025-07-27 01:12:02] 2025-07-27 05:11:22,110 | INFO     | . get job = 0 s
[2025-07-27 01:12:02] 2025-07-27 05:11:22,110 | INFO     | . initial setup = 9 s
[2025-07-27 01:12:02] 2025-07-27 05:11:22,110 | INFO     | . payload setup = 60 s
[2025-07-27 01:12:02] 2025-07-27 05:11:22,110 | INFO     | . stage-in = 0 s
[2025-07-27 01:12:02] 2025-07-27 05:11:22,110 | INFO     | . payload execution = 20693 s
[2025-07-27 01:12:02] 2025-07-27 05:11:22,110 | INFO     | . stage-out = 6 s
[2025-07-27 01:12:02] 2025-07-27 05:11:22,110 | INFO     | . log creation = 0 s
[2025-07-27 01:12:02] 2025-07-27 05:11:22,110 | INFO     | ..............................
[2025-07-27 01:12:02] 2025-07-27 05:11:23,030 | INFO     | 
[2025-07-27 01:12:02] 2025-07-27 05:11:23,030 | INFO     | job summary report
[2025-07-27 01:12:02] 2025-07-27 05:11:23,030 | INFO     | --------------------------------------------------
[2025-07-27 01:12:02] 2025-07-27 05:11:23,030 | INFO     | PanDA job id: 6745352172
[2025-07-27 01:12:02] 2025-07-27 05:11:23,030 | INFO     | task id: 45743349
[2025-07-27 01:12:02] 2025-07-27 05:11:23,030 | INFO     | errors: (none)
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | pilot state: finished 
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | transexitcode: 0
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | exeerrorcode: 0
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | exeerrordiag: 
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | exitcode: 0
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | exitmsg: OK
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | cpuconsumptiontime: 50620 s
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | nevents: 400
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | neventsw: 0
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | pid: 3937588
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | pgrp: 3937588
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | corecount: 8
[2025-07-27 01:12:02] 2025-07-27 05:11:23,031 | INFO     | event service: False
[2025-07-27 01:12:02] 2025-07-27 05:11:23,032 | INFO     | sizes: {0: 2396647, 1: 2397248, 2: 2397332, 3: 2397388, 4: 2397559, 5: 2397587, 6: 2397771, 17: 2397799, 28: 2397827, 39: 2397855, 48: 2398145, 51: 2398453, 20759:
[2025-07-27 01:12:02] 2025-07-27 05:11:23,032 | INFO     | --------------------------------------------------
[2025-07-27 01:12:02] 2025-07-27 05:11:23,032 | INFO     | 
[2025-07-27 01:12:02] 2025-07-27 05:11:23,032 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 01:12:02] 2025-07-27 05:11:23,336 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,336 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,337 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,337 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,338 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,338 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 01:12:02] 2025-07-27 05:11:23,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 01:12:02] 2025-07-27 05:11:23,339 | INFO     | job 6745352172 has completed (purged errors)
[2025-07-27 01:12:02] 2025-07-27 05:11:23,339 | INFO     | overall cleanup function is called
[2025-07-27 01:12:02] 2025-07-27 05:11:24,381 | INFO     | --- collectZombieJob: --- 10, [3937588]
[2025-07-27 01:12:02] 2025-07-27 05:11:24,381 | INFO     | zombie collector waiting for pid 3937588
[2025-07-27 01:12:02] 2025-07-27 05:11:24,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 01:12:02] 2025-07-27 05:11:24,381 | INFO     | collected zombie processes
[2025-07-27 01:12:02] 2025-07-27 05:11:24,381 | INFO     | will attempt to kill all subprocesses of pid=3937588
[2025-07-27 01:12:02] 2025-07-27 05:11:27,455 | INFO     | process IDs to be killed: [3937588] (in reverse order)
[2025-07-27 01:12:02] 2025-07-27 05:11:27,855 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 01:12:02] 2025-07-27 05:11:27,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 01:12:02] 2025-07-27 05:11:27,876 | INFO     | did not find any defunct processes belonging to 3937588
[2025-07-27 01:12:02] 2025-07-27 05:11:27,902 | INFO     | did not find any defunct processes belonging to 3937588
[2025-07-27 01:12:02] 2025-07-27 05:11:27,902 | INFO     | ready for new job
[2025-07-27 01:12:02] 2025-07-27 05:11:27,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 01:12:02] 2025-07-27 05:11:27,931 | INFO     | ***************************************
[2025-07-27 01:12:02] 2025-07-27 05:11:27,932 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 01:12:02] 2025-07-27 05:11:27,932 | INFO     | ***************************************
[2025-07-27 01:12:02] 2025-07-27 05:11:27,932 | INFO     | 
[2025-07-27 01:12:02] 2025-07-27 05:11:27,971 | INFO     | architecture information:
[2025-07-27 01:12:02] 2025-07-27 05:11:27,991 | INFO     | executing command: cat /etc/os-release
[2025-07-27 01:12:02] 2025-07-27 05:11:28,110 | INFO     | cat /etc/os-release:
[2025-07-27 01:12:02] NAME="CentOS Linux"
[2025-07-27 01:12:02] VERSION="7 (Core)"
[2025-07-27 01:12:02] ID="centos"
[2025-07-27 01:12:02] ID_LIKE="rhel fedora"
[2025-07-27 01:12:02] VERSION_ID="7"
[2025-07-27 01:12:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 01:12:02] ANSI_COLOR="0;31"
[2025-07-27 01:12:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 01:12:02] HOME_URL="https://www.centos.org/"
[2025-07-27 01:12:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 01:12:02] 
[2025-07-27 01:12:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 01:12:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 01:12:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 01:12:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 01:12:02] 
[2025-07-27 01:12:02] 2025-07-27 05:11:28,110 | INFO     | ***************************************
[2025-07-27 01:12:02] 2025-07-27 05:11:28,614 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 01:12:02] 2025-07-27 05:11:28,738 | INFO     | sufficient remaining disk space (76192677888 B)
[2025-07-27 01:12:02] 2025-07-27 05:11:28,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 01:12:02] 2025-07-27 05:11:28,739 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 01:12:02] 2025-07-27 05:11:28,739 | INFO     | update_server=False
[2025-07-27 01:12:02] 2025-07-27 05:11:28,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 01:12:02] 2025-07-27 05:11:28,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:12:02] 2025-07-27 05:11:28,740 | INFO     | aborting loop
[2025-07-27 01:12:02] 2025-07-27 05:11:28,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:12:02] 2025-07-27 05:11:28,957 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 01:12:02] 2025-07-27 05:11:29,374 | INFO     | all data control threads have been joined
[2025-07-27 01:12:02] 2025-07-27 05:11:29,700 | INFO     | all job control threads have been joined
[2025-07-27 01:12:02] 2025-07-27 05:11:29,751 | INFO     | [job] queue monitor thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:29,752 | INFO     | [job] job monitor thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:29,757 | INFO     | [job] retrieve thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:29,778 | INFO     | all payload control threads have been joined
[2025-07-27 01:12:02] 2025-07-27 05:11:29,873 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:29,873 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:29,882 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:29,882 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:29,883 | INFO     | [data] copytool_in thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:30,380 | INFO     | [data] control thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:30,594 | INFO     | [payload] failed_post thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:30,706 | INFO     | [job] control thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:30,784 | INFO     | [payload] control thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:30,899 | INFO     | [job] validate thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:30,977 | INFO     | [data] copytool_out thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:31,084 | INFO     | [payload] validate_post thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:31,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 01:12:02] 2025-07-27 05:11:35,598 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 01:12:02] 2025-07-27 05:11:36,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706987837248)>', '<ExcThread(monitor, started 140706249160448)>']
[2025-07-27 01:12:02] 2025-07-27 05:11:41,153 | INFO     | all workflow threads have been joined
[2025-07-27 01:12:02] 2025-07-27 05:11:41,153 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 01:12:02] 2025-07-27 05:11:41,153 | INFO     | traces error code: 0
[2025-07-27 01:12:02] 2025-07-27 05:11:41,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 01:12:02] 2025-07-27 05:11:59,715 | INFO     | PID=3919517 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 01:12:02] 2025-07-27 05:11:59,716 | INFO     | .. there are 18 such processes running
[2025-07-27 01:12:02] 2025-07-27 05:11:59,716 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 01:12:02] 2025-07-27 05:11:59,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 01:12:02] 2025-07-27 05:11:59,716 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 01:12:02] 2025-07-27 05:11:59,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 01:12:02] 2025-07-27 05:11:59,716 | INFO     | [monitor] control thread has ended
[2025-07-27 01:12:02] 2025-07-27 05:12:00,688 [wrapper] ==== pilot stdout END ====
[2025-07-27 01:12:02] 2025-07-27 05:12:00,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 01:12:02] 2025-07-27 05:12:00,696 [wrapper] pilotpid: 3919517
[2025-07-27 01:12:02] 2025-07-27 05:12:00,700 [wrapper] Pilot exit status: 0
[2025-07-27 01:12:02] 2025-07-27 05:12:00,796 [wrapper] pandaids: 6745352172
[2025-07-27 01:12:02] 2025-07-27 05:12:00,922 [wrapper] cleanup supervisor_pilot 1347323 3919518
[2025-07-27 01:12:02] 2025-07-27 05:12:00,938 [wrapper] Test setup, not cleaning
[2025-07-27 01:12:02] 2025-07-27 05:12:00,964 [wrapper] apfmon messages muted
[2025-07-27 01:12:02] 2025-07-27 05:12:01,013 [wrapper] ==== wrapper stdout END ====
[2025-07-27 01:12:02] 2025-07-27 05:12:01,037 [wrapper] ==== wrapper stderr END ====
[2025-07-27 01:12:02]  *** Error codes and diagnostics ***
[2025-07-27 01:12:02]     "exeErrorCode": 0,
[2025-07-27 01:12:02]     "exeErrorDiag": "",
[2025-07-27 01:12:02]     "pilotErrorCode": 0,
[2025-07-27 01:12:02]     "pilotErrorDiag": "",
[2025-07-27 01:12:02]  *** Listing of results directory ***
[2025-07-27 01:12:02] total 352284
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 14:15 pilot3.tar.gz
[2025-07-27 01:12:02] -rwx------. 1 boincer umatlas     36292 Jul 26 14:18 runpilot2-wrapper.sh
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 14:18 queuedata.json
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas       100 Jul 26 19:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 01:12:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 19:21 run_atlas
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas       105 Jul 26 19:21 job.xml
[2025-07-27 01:12:02] -rw-r--r--. 2 boincer umatlas 146065392 Jul 26 19:21 EVNT.45743347._002381.pool.root.1
[2025-07-27 01:12:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 19:21 start_atlas.sh
[2025-07-27 01:12:02] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 19:21 shared
[2025-07-27 01:12:02] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 19:21 input.tar.gz
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas         0 Jul 26 19:21 boinc_lockfile
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 19:21 pandaJob.out
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas    980117 Jul 26 19:23 agis_schedconf.cvmfs.json
[2025-07-27 01:12:02] drwx------. 4 boincer umatlas      4096 Jul 26 19:23 pilot3
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas 206712687 Jul 27 01:09 HITS.45743349._042242.pool.root.1
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas       530 Jul 27 01:09 boinc_task_state.xml
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas      1050 Jul 27 01:10 memory_monitor_summary.json
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas   1593052 Jul 27 01:10 agis_ddmendpoints.agis.ALL.json
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas    439075 Jul 27 01:10 log.45743349._042242.job.log.tgz.1
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas      6856 Jul 27 01:11 init_data.xml
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas        95 Jul 27 01:11 pilot_heartbeat.json
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas      7834 Jul 27 01:11 heartbeat.json
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 01:11 boinc_mmap_file
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas        28 Jul 27 01:11 wrapper_checkpoint.txt
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas       823 Jul 27 01:11 pilotlog.txt
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas   1601540 Jul 27 01:12 log.45743349._042242.job.log.1
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas       357 Jul 27 01:12 output.list
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas       620 Jul 27 01:12 runtime_log
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas   2058240 Jul 27 01:12 result.tar.gz
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas      8661 Jul 27 01:12 runtime_log.err
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas       659 Jul 27 01:12 KLCODm1eyz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxD1KDmynYJkn.diag
[2025-07-27 01:12:02] -rw-r--r--. 1 boincer umatlas     21291 Jul 27 01:12 stderr.txt
[2025-07-27 01:12:02] HITS file was successfully produced:
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas 206712687 Jul 27 01:09 shared/HITS.pool.root.1
[2025-07-27 01:12:02]  *** Contents of shared directory: ***
[2025-07-27 01:12:02] total 347080
[2025-07-27 01:12:02] -rw-r--r--. 2 boincer umatlas 146065392 Jul 26 19:21 ATLAS.root_0
[2025-07-27 01:12:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 19:21 start_atlas.sh
[2025-07-27 01:12:02] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 19:21 input.tar.gz
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas 206712687 Jul 27 01:09 HITS.pool.root.1
[2025-07-27 01:12:02] -rw-------. 1 boincer umatlas   2058240 Jul 27 01:12 result.tar.gz
01:12:24 (3911909): run_atlas exited; CPU time 51443.553219
01:12:24 (3911909): called boinc_finish(0)

</stderr_txt>
]]>

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