Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:18:39 (353898): wrapper (7.7.26015): starting
19:18:39 (353898): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 19:18:39] Arguments: --nthreads 8
[2025-07-26 19:18:39] Threads: 8
[2025-07-26 19:18:39] Checking for CVMFS
[2025-07-26 19:18:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 19:18:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 19:18:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 19:18:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 19:18:40] 2.12.6.0 2059728 17574 349612 148793 1 65 31667236 32935936 22647 16776704 0 57557247 99.703 77507442 22530 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 19:18:40] CVMFS is ok
[2025-07-26 19:18:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 19:18:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 19:18:41] Further information can be found at the LHC@home message board.
[2025-07-26 19:18:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 19:18:41] Checking for apptainer binary...
[2025-07-26 19:18:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 19:18:41] Running /usr/bin/apptainer --version
[2025-07-26 19:18:41] apptainer version 1.4.1-1.el9
[2025-07-26 19:18:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 19:18:41] c6-12-29-1.aglt2.org
[2025-07-26 19:18:41] apptainer works
[2025-07-26 19:18:41] Set ATHENA_PROC_NUMBER=8
[2025-07-26 19:18:41] Set ATHENA_CORE_NUMBER=8
[2025-07-26 19:18:41] Starting ATLAS job with PandaID=6745230240
[2025-07-26 19:18:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 22:25:34]  *** The last 200 lines of the pilot log: ***
[2025-07-26 22:25:34] 2025-07-27 02:24:54,278 | INFO     | monitor loop #636: job 0:6745230240 is in state 'finished'
[2025-07-26 22:25:34] 2025-07-27 02:24:54,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 22:25:34] 2025-07-27 02:24:54,947 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 22:25:34] 2025-07-27 02:24:55,020 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2445.391135416667
[2025-07-26 22:25:34] 2025-07-27 02:24:55,067 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745230240/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 22:25:34] 2025-07-27 02:24:55,075 | INFO     | extracted standard info from prmon json
[2025-07-26 22:25:34] 2025-07-27 02:24:55,075 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 22:25:34] 2025-07-27 02:24:55,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 22:25:34] 2025-07-27 02:24:55,090 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 22:25:34] 2025-07-27 02:24:55,090 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 22:25:34] 2025-07-27 02:24:55,102 | INFO     | fitting pss+swap vs Time
[2025-07-26 22:25:34] 2025-07-27 02:24:55,103 | INFO     | sum of square deviations: 1808298789.6611109
[2025-07-26 22:25:34] 2025-07-27 02:24:55,104 | INFO     | sum of deviations: -31283320050.983334
[2025-07-26 22:25:34] 2025-07-27 02:24:55,104 | INFO     | mean x: 1753577563.6722221
[2025-07-26 22:25:34] 2025-07-27 02:24:55,108 | INFO     | mean y: 2218224.9833333334
[2025-07-26 22:25:34] 2025-07-27 02:24:55,109 | INFO     | -- intersect: 30338868601.695965
[2025-07-26 22:25:34] 2025-07-27 02:24:55,109 | INFO     | intersect: 30338868601.695965
[2025-07-26 22:25:34] 2025-07-27 02:24:55,109 | INFO     | chi2: 2.88446230390615
[2025-07-26 22:25:34] 2025-07-27 02:24:55,110 | INFO     | sum of square deviations: 1661756659.508573
[2025-07-26 22:25:34] 2025-07-27 02:24:55,111 | INFO     | sum of deviations: -18207714932.011425
[2025-07-26 22:25:34] 2025-07-27 02:24:55,111 | INFO     | mean x: 1753577411.1771429
[2025-07-26 22:25:34] 2025-07-27 02:24:55,111 | INFO     | mean y: 2231604.097142857
[2025-07-26 22:25:34] 2025-07-27 02:24:55,111 | INFO     | -- intersect: 19216018069.902657
[2025-07-26 22:25:34] 2025-07-27 02:24:55,111 | INFO     | intersect: 19216018069.902657
[2025-07-26 22:25:34] 2025-07-27 02:24:55,112 | INFO     | chi2: 2.233450603193387
[2025-07-26 22:25:34] 2025-07-27 02:24:55,112 | INFO     | current chi2=2.233450603193387 (change=22.569603347950164 %)
[2025-07-26 22:25:34] 2025-07-27 02:24:55,112 | INFO     | right removable region: 174
[2025-07-26 22:25:34] 2025-07-27 02:24:55,116 | INFO     | sum of square deviations: 1661748728.8571448
[2025-07-26 22:25:34] 2025-07-27 02:24:55,118 | INFO     | sum of deviations: -59363327787.71432
[2025-07-26 22:25:34] 2025-07-27 02:24:55,118 | INFO     | mean x: 1753577716.1714287
[2025-07-26 22:25:34] 2025-07-27 02:24:55,118 | INFO     | mean y: 2247190.257142857
[2025-07-26 22:25:34] 2025-07-27 02:24:55,118 | INFO     | -- intersect: 62646019355.44408
[2025-07-26 22:25:34] 2025-07-27 02:24:55,118 | INFO     | intersect: 62646019355.44408
[2025-07-26 22:25:34] 2025-07-27 02:24:55,118 | INFO     | chi2: 1.1861545725528202
[2025-07-26 22:25:34] 2025-07-27 02:24:55,119 | INFO     | current chi2=1.1861545725528202 (change=58.87779254571901 %)
[2025-07-26 22:25:34] 2025-07-27 02:24:55,119 | INFO     | sum of square deviations: 1523327681.205884
[2025-07-26 22:25:34] 2025-07-27 02:24:55,120 | INFO     | sum of deviations: -63736447105.23529
[2025-07-26 22:25:34] 2025-07-27 02:24:55,125 | INFO     | mean x: 1753577868.6764705
[2025-07-26 22:25:34] 2025-07-27 02:24:55,125 | INFO     | mean y: 2252012.5411764705
[2025-07-26 22:25:34] 2025-07-27 02:24:55,125 | INFO     | -- intersect: 73372429979.32846
[2025-07-26 22:25:34] 2025-07-27 02:24:55,125 | INFO     | intersect: 73372429979.32846
[2025-07-26 22:25:34] 2025-07-27 02:24:55,125 | INFO     | chi2: 1.078755220418484
[2025-07-26 22:25:34] 2025-07-27 02:24:55,126 | INFO     | current chi2=1.078755220418484 (change=9.054414544235431 %)
[2025-07-26 22:25:34] 2025-07-27 02:24:55,126 | INFO     | left removable region: 20
[2025-07-26 22:25:34] 2025-07-27 02:24:55,126 | INFO     | sum of square deviations: 1132412717.4090962
[2025-07-26 22:25:34] 2025-07-27 02:24:55,127 | INFO     | sum of deviations: -41505450863.40908
[2025-07-26 22:25:34] 2025-07-27 02:24:55,127 | INFO     | mean x: 1753577990.6818182
[2025-07-26 22:25:34] 2025-07-27 02:24:55,127 | INFO     | mean y: 2256125.603896104
[2025-07-26 22:25:34] 2025-07-27 02:24:55,127 | INFO     | -- intersect: 64274799173.26925
[2025-07-26 22:25:34] 2025-07-27 02:24:55,127 | INFO     | intersect: 64274799173.26925
[2025-07-26 22:25:34] 2025-07-27 02:24:55,128 | INFO     | chi2: 0.39477967894807614
[2025-07-26 22:25:34] 2025-07-27 02:24:55,128 | INFO     | -- intersect: 64274799173.26925
[2025-07-26 22:25:34] 2025-07-27 02:24:55,128 | INFO     | current memory leak: -36.65 B/s (using 154 data points, chi2=0.39)
[2025-07-26 22:25:34] 2025-07-27 02:24:55,129 | INFO     | could have reported an average CPU frequency of 2465 MHz (10 samples)
[2025-07-26 22:25:34] 2025-07-27 02:24:55,133 | INFO     | ..............................
[2025-07-26 22:25:34] 2025-07-27 02:24:55,134 | INFO     | . Timing measurements:
[2025-07-26 22:25:34] 2025-07-27 02:24:55,134 | INFO     | . get job = 0 s
[2025-07-26 22:25:34] 2025-07-27 02:24:55,134 | INFO     | . initial setup = 3 s
[2025-07-26 22:25:34] 2025-07-27 02:24:55,134 | INFO     | . payload setup = 35 s
[2025-07-26 22:25:34] 2025-07-27 02:24:55,134 | INFO     | . stage-in = 0 s
[2025-07-26 22:25:34] 2025-07-27 02:24:55,152 | INFO     | . payload execution = 10980 s
[2025-07-26 22:25:34] 2025-07-27 02:24:55,152 | INFO     | . stage-out = 8 s
[2025-07-26 22:25:34] 2025-07-27 02:24:55,152 | INFO     | . log creation = 1 s
[2025-07-26 22:25:34] 2025-07-27 02:24:55,152 | INFO     | ..............................
[2025-07-26 22:25:34] 2025-07-27 02:24:56,389 | INFO     | 
[2025-07-26 22:25:34] 2025-07-27 02:24:56,390 | INFO     | job summary report
[2025-07-26 22:25:34] 2025-07-27 02:24:56,390 | INFO     | --------------------------------------------------
[2025-07-26 22:25:34] 2025-07-27 02:24:56,390 | INFO     | PanDA job id: 6745230240
[2025-07-26 22:25:34] 2025-07-27 02:24:56,390 | INFO     | task id: 45743349
[2025-07-26 22:25:34] 2025-07-27 02:24:56,390 | INFO     | errors: (none)
[2025-07-26 22:25:34] 2025-07-27 02:24:56,390 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 22:25:34] 2025-07-27 02:24:56,390 | INFO     | pilot state: finished 
[2025-07-26 22:25:34] 2025-07-27 02:24:56,390 | INFO     | transexitcode: 0
[2025-07-26 22:25:34] 2025-07-27 02:24:56,391 | INFO     | exeerrorcode: 0
[2025-07-26 22:25:34] 2025-07-27 02:24:56,391 | INFO     | exeerrordiag: 
[2025-07-26 22:25:34] 2025-07-27 02:24:56,391 | INFO     | exitcode: 0
[2025-07-26 22:25:34] 2025-07-27 02:24:56,391 | INFO     | exitmsg: OK
[2025-07-26 22:25:34] 2025-07-27 02:24:56,391 | INFO     | cpuconsumptiontime: 57323 s
[2025-07-26 22:25:34] 2025-07-27 02:24:56,391 | INFO     | nevents: 400
[2025-07-26 22:25:34] 2025-07-27 02:24:56,391 | INFO     | neventsw: 0
[2025-07-26 22:25:34] 2025-07-27 02:24:56,391 | INFO     | pid: 371683
[2025-07-26 22:25:34] 2025-07-27 02:24:56,391 | INFO     | pgrp: 371683
[2025-07-26 22:25:34] 2025-07-27 02:24:56,391 | INFO     | corecount: 8
[2025-07-26 22:25:34] 2025-07-27 02:24:56,391 | INFO     | event service: False
[2025-07-26 22:25:34] 2025-07-27 02:24:56,392 | INFO     | sizes: {0: 2397304, 1: 2397503, 2: 2397531, 13: 2397531, 24: 2397587, 32: 2397877, 35: 2398033, 11021: 2427184, 11022: 2427183, 11031: 2436293, 11053: 2436431}
[2025-07-26 22:25:34] 2025-07-27 02:24:56,392 | INFO     | --------------------------------------------------
[2025-07-26 22:25:34] 2025-07-27 02:24:56,392 | INFO     | 
[2025-07-26 22:25:34] 2025-07-27 02:24:56,392 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 22:25:34] 2025-07-27 02:24:56,500 | INFO     | PID=360415 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 22:25:34] 2025-07-27 02:24:56,501 | INFO     | .. there are 34 such processes running
[2025-07-26 22:25:34] 2025-07-27 02:24:56,596 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,596 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,596 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,597 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,598 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,598 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 22:25:34] 2025-07-27 02:24:56,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,598 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 22:25:34] 2025-07-27 02:24:56,599 | INFO     | job 6745230240 has completed (purged errors)
[2025-07-26 22:25:34] 2025-07-27 02:24:56,599 | INFO     | overall cleanup function is called
[2025-07-26 22:25:34] 2025-07-27 02:24:57,610 | INFO     | --- collectZombieJob: --- 10, [371683]
[2025-07-26 22:25:34] 2025-07-27 02:24:57,611 | INFO     | zombie collector waiting for pid 371683
[2025-07-26 22:25:34] 2025-07-27 02:24:57,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 22:25:34] 2025-07-27 02:24:57,611 | INFO     | collected zombie processes
[2025-07-26 22:25:34] 2025-07-27 02:24:57,611 | INFO     | will attempt to kill all subprocesses of pid=371683
[2025-07-26 22:25:34] 2025-07-27 02:24:59,191 | INFO     | process IDs to be killed: [371683] (in reverse order)
[2025-07-26 22:25:34] 2025-07-27 02:24:59,387 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 22:25:34] 2025-07-27 02:24:59,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 22:25:34] 2025-07-27 02:24:59,409 | INFO     | did not find any defunct processes belonging to 371683
[2025-07-26 22:25:34] 2025-07-27 02:24:59,431 | INFO     | did not find any defunct processes belonging to 371683
[2025-07-26 22:25:34] 2025-07-27 02:24:59,431 | INFO     | ready for new job
[2025-07-26 22:25:34] 2025-07-27 02:24:59,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 22:25:34] 2025-07-27 02:24:59,434 | INFO     | ***************************************
[2025-07-26 22:25:34] 2025-07-27 02:24:59,434 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 22:25:34] 2025-07-27 02:24:59,434 | INFO     | ***************************************
[2025-07-26 22:25:34] 2025-07-27 02:24:59,434 | INFO     | 
[2025-07-26 22:25:34] 2025-07-27 02:24:59,466 | INFO     | architecture information:
[2025-07-26 22:25:34] 2025-07-27 02:24:59,482 | INFO     | executing command: cat /etc/os-release
[2025-07-26 22:25:34] 2025-07-27 02:24:59,585 | INFO     | cat /etc/os-release:
[2025-07-26 22:25:34] NAME="CentOS Linux"
[2025-07-26 22:25:34] VERSION="7 (Core)"
[2025-07-26 22:25:34] ID="centos"
[2025-07-26 22:25:34] ID_LIKE="rhel fedora"
[2025-07-26 22:25:34] VERSION_ID="7"
[2025-07-26 22:25:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 22:25:34] ANSI_COLOR="0;31"
[2025-07-26 22:25:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 22:25:34] HOME_URL="https://www.centos.org/"
[2025-07-26 22:25:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 22:25:34] 
[2025-07-26 22:25:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 22:25:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 22:25:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 22:25:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 22:25:34] 
[2025-07-26 22:25:34] 2025-07-27 02:24:59,585 | INFO     | ***************************************
[2025-07-26 22:25:34] 2025-07-27 02:25:00,089 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 22:25:34] 2025-07-27 02:25:00,201 | INFO     | sufficient remaining disk space (95863963648 B)
[2025-07-26 22:25:34] 2025-07-27 02:25:00,201 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 22:25:34] 2025-07-27 02:25:00,202 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 22:25:34] 2025-07-27 02:25:00,202 | INFO     | update_server=False
[2025-07-26 22:25:34] 2025-07-27 02:25:00,202 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 22:25:34] 2025-07-27 02:25:00,202 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 22:25:34] 2025-07-27 02:25:00,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:25:34] 2025-07-27 02:25:00,335 | INFO     | aborting loop
[2025-07-26 22:25:34] 2025-07-27 02:25:00,628 | INFO     | all data control threads have been joined
[2025-07-26 22:25:34] 2025-07-27 02:25:00,947 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 22:25:34] 2025-07-27 02:25:01,208 | INFO     | [job] retrieve thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:01,240 | INFO     | all payload control threads have been joined
[2025-07-26 22:25:34] 2025-07-27 02:25:01,341 | INFO     | [job] job monitor thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:01,341 | INFO     | all job control threads have been joined
[2025-07-26 22:25:34] 2025-07-27 02:25:01,419 | INFO     | [job] validate thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:01,520 | INFO     | [payload] validate_post thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:01,553 | INFO     | [payload] failed_post thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:01,634 | INFO     | [data] control thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:01,781 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:01,794 | INFO     | [data] copytool_in thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:01,798 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:01,953 | INFO     | [job] queue monitor thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:01,981 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:02,209 | INFO     | [data] copytool_out thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:02,246 | INFO     | [payload] control thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:02,350 | INFO     | [job] control thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:02,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 22:25:34] 2025-07-27 02:25:02,424 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:06,401 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 22:25:34] 2025-07-27 02:25:07,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139996239169344)>', '<ExcThread(monitor, started 139995666970368)>']
[2025-07-26 22:25:34] 2025-07-27 02:25:12,501 | INFO     | all workflow threads have been joined
[2025-07-26 22:25:34] 2025-07-27 02:25:12,502 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 22:25:34] 2025-07-27 02:25:12,502 | INFO     | traces error code: 0
[2025-07-26 22:25:34] 2025-07-27 02:25:12,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 22:25:34] 2025-07-27 02:25:32,495 | INFO     | PID=360415 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 22:25:34] 2025-07-27 02:25:32,496 | INFO     | .. there are 34 such processes running
[2025-07-26 22:25:34] 2025-07-27 02:25:32,496 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 22:25:34] 2025-07-27 02:25:32,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 22:25:34] 2025-07-27 02:25:32,497 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 22:25:34] 2025-07-27 02:25:32,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 22:25:34] 2025-07-27 02:25:32,497 | INFO     | [monitor] control thread has ended
[2025-07-26 22:25:34] 2025-07-27 02:25:34,315 [wrapper] ==== pilot stdout END ====
[2025-07-26 22:25:34] 2025-07-27 02:25:34,332 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 22:25:34] 2025-07-27 02:25:34,355 [wrapper] pilotpid: 360415
[2025-07-26 22:25:34] 2025-07-27 02:25:34,373 [wrapper] Pilot exit status: 0
[2025-07-26 22:25:34] 2025-07-27 02:25:34,451 [wrapper] pandaids: 6745230240
[2025-07-26 22:25:34] 2025-07-27 02:25:34,606 [wrapper] cleanup supervisor_pilot 1120843 360416
[2025-07-26 22:25:34] 2025-07-27 02:25:34,623 [wrapper] Test setup, not cleaning
[2025-07-26 22:25:34] 2025-07-27 02:25:34,636 [wrapper] apfmon messages muted
[2025-07-26 22:25:34] 2025-07-27 02:25:34,665 [wrapper] ==== wrapper stdout END ====
[2025-07-26 22:25:34] 2025-07-27 02:25:34,683 [wrapper] ==== wrapper stderr END ====
[2025-07-26 22:25:34]  *** Error codes and diagnostics ***
[2025-07-26 22:25:34]     "exeErrorCode": 0,
[2025-07-26 22:25:34]     "exeErrorDiag": "",
[2025-07-26 22:25:34]     "pilotErrorCode": 0,
[2025-07-26 22:25:34]     "pilotErrorDiag": "",
[2025-07-26 22:25:34]  *** Listing of results directory ***
[2025-07-26 22:25:34] total 353788
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 11:29 pilot3.tar.gz
[2025-07-26 22:25:34] -rwx------. 1 boincer umatlas     36292 Jul 26 11:31 runpilot2-wrapper.sh
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 11:31 queuedata.json
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas       100 Jul 26 19:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 22:25:34] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 19:18 run_atlas
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas       105 Jul 26 19:18 job.xml
[2025-07-26 22:25:34] -rw-r--r--. 2 boincer umatlas 146359708 Jul 26 19:18 EVNT.45743347._002290.pool.root.1
[2025-07-26 22:25:34] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 19:18 input.tar.gz
[2025-07-26 22:25:34] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 19:18 start_atlas.sh
[2025-07-26 22:25:34] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 19:18 shared
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas         0 Jul 26 19:18 boinc_lockfile
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 19:18 pandaJob.out
[2025-07-26 22:25:34] -rw-------. 1 boincer umatlas    980117 Jul 26 19:19 agis_schedconf.cvmfs.json
[2025-07-26 22:25:34] drwx------. 4 boincer umatlas      4096 Jul 26 19:19 pilot3
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas      6860 Jul 26 22:20 init_data.xml
[2025-07-26 22:25:34] -rw-------. 1 boincer umatlas 209590113 Jul 26 22:23 HITS.45743349._040147.pool.root.1
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas       531 Jul 26 22:23 boinc_task_state.xml
[2025-07-26 22:25:34] -rw-------. 1 boincer umatlas      1042 Jul 26 22:24 memory_monitor_summary.json
[2025-07-26 22:25:34] -rw-------. 1 boincer umatlas   1593052 Jul 26 22:24 agis_ddmendpoints.agis.ALL.json
[2025-07-26 22:25:34] -rw-------. 1 boincer umatlas    353419 Jul 26 22:24 log.45743349._040147.job.log.tgz.1
[2025-07-26 22:25:34] -rw-------. 1 boincer umatlas      7833 Jul 26 22:24 heartbeat.json
[2025-07-26 22:25:34] -rw-------. 1 boincer umatlas        95 Jul 26 22:24 pilot_heartbeat.json
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas        28 Jul 26 22:25 wrapper_checkpoint.txt
[2025-07-26 22:25:34] -rw-------. 1 boincer umatlas       822 Jul 26 22:25 pilotlog.txt
[2025-07-26 22:25:34] -rw-------. 1 boincer umatlas    871645 Jul 26 22:25 log.45743349._040147.job.log.1
[2025-07-26 22:25:34] -rw-------. 1 boincer umatlas       357 Jul 26 22:25 output.list
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas       620 Jul 26 22:25 runtime_log
[2025-07-26 22:25:34] -rw-------. 1 boincer umatlas   1249280 Jul 26 22:25 result.tar.gz
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas      8671 Jul 26 22:25 runtime_log.err
[2025-07-26 22:25:34] -rw-------. 1 boincer umatlas       658 Jul 26 22:25 NCIODmR3vz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmY00KDm1qBK2m.diag
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 22:25 boinc_mmap_file
[2025-07-26 22:25:34] -rw-r--r--. 1 boincer umatlas     21339 Jul 26 22:25 stderr.txt
[2025-07-26 22:25:35] HITS file was successfully produced:
[2025-07-26 22:25:35] -rw-------. 1 boincer umatlas 209590113 Jul 26 22:23 shared/HITS.pool.root.1
[2025-07-26 22:25:35]  *** Contents of shared directory: ***
[2025-07-26 22:25:35] total 349384
[2025-07-26 22:25:35] -rw-r--r--. 2 boincer umatlas 146359708 Jul 26 19:18 ATLAS.root_0
[2025-07-26 22:25:35] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 19:18 input.tar.gz
[2025-07-26 22:25:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 19:18 start_atlas.sh
[2025-07-26 22:25:35] -rw-------. 1 boincer umatlas 209590113 Jul 26 22:23 HITS.pool.root.1
[2025-07-26 22:25:35] -rw-------. 1 boincer umatlas   1249280 Jul 26 22:25 result.tar.gz
22:25:57 (353898): run_atlas exited; CPU time 57887.724434
22:25:57 (353898): called boinc_finish(0)

</stderr_txt>
]]>

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