Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:29:04 (15752): wrapper (7.7.26015): starting
11:29:04 (15752): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 11:29:04] Arguments: --nthreads 8
[2025-07-27 11:29:04] Threads: 8
[2025-07-27 11:29:04] Checking for CVMFS
[2025-07-27 11:29:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 11:29:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 11:29:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 11:29:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 11:29:05] 2.11.2.0 31287 14297 77032 148807 1 156 12908946 25165824 4053 130560 0 6103241 99.857 2672082 3016 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 11:29:05] CVMFS is ok
[2025-07-27 11:29:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 11:29:05] Checking for apptainer binary...
[2025-07-27 11:29:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 11:29:05] Running /usr/bin/apptainer --version
[2025-07-27 11:29:05] apptainer version 1.3.2-1.el7
[2025-07-27 11:29:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 11:29:06] cg-vwn426.simple-grid.lan
[2025-07-27 11:29:06] apptainer works
[2025-07-27 11:29:06] Set ATHENA_PROC_NUMBER=8
[2025-07-27 11:29:06] Set ATHENA_CORE_NUMBER=8
[2025-07-27 11:29:06] Starting ATLAS job with PandaID=6745351401
[2025-07-27 11:29:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:08:46]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:08:46] 2025-07-27 13:53:17,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:08:46] 2025-07-27 13:53:17,418 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:08:46] 2025-07-27 13:53:17,418 | INFO     | sum of square deviations: 5263458688.0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,421 | INFO     | sum of deviations: -11851365114.000004
[2025-07-27 16:08:46] 2025-07-27 13:53:17,421 | INFO     | mean x: 1753616450.0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,437 | INFO     | mean y: 2497732.3696498056
[2025-07-27 16:08:46] 2025-07-27 13:53:17,437 | INFO     | -- intersect: 3950994348.52976
[2025-07-27 16:08:46] 2025-07-27 13:53:17,437 | INFO     | intersect: 3950994348.52976
[2025-07-27 16:08:46] 2025-07-27 13:53:17,438 | INFO     | chi2: 2.715086869306577
[2025-07-27 16:08:46] 2025-07-27 13:53:17,438 | INFO     | sum of square deviations: 4962187923.0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,440 | INFO     | sum of deviations: 5181393253.000001
[2025-07-27 16:08:46] 2025-07-27 13:53:17,440 | INFO     | mean x: 1753616297.5
[2025-07-27 16:08:46] 2025-07-27 13:53:17,441 | INFO     | mean y: 2506217.6746031744
[2025-07-27 16:08:46] 2025-07-27 13:53:17,441 | INFO     | -- intersect: -1828576319.5470212
[2025-07-27 16:08:46] 2025-07-27 13:53:17,441 | INFO     | intersect: -1828576319.5470212
[2025-07-27 16:08:46] 2025-07-27 13:53:17,441 | INFO     | chi2: 1.9471629460573665
[2025-07-27 16:08:46] 2025-07-27 13:53:17,441 | INFO     | current chi2=1.9471629460573665 (change=28.283585764065638 %)
[2025-07-27 16:08:46] 2025-07-27 13:53:17,442 | INFO     | sum of square deviations: 4672638308.0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,444 | INFO     | sum of deviations: 4823065894.000001
[2025-07-27 16:08:46] 2025-07-27 13:53:17,444 | INFO     | mean x: 1753616145.0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,444 | INFO     | mean y: 2506028.927125506
[2025-07-27 16:08:46] 2025-07-27 13:53:17,444 | INFO     | -- intersect: -1807564783.8804257
[2025-07-27 16:08:46] 2025-07-27 13:53:17,444 | INFO     | intersect: -1807564783.8804257
[2025-07-27 16:08:46] 2025-07-27 13:53:17,445 | INFO     | chi2: 1.9470719980887459
[2025-07-27 16:08:46] 2025-07-27 13:53:17,445 | INFO     | current chi2=1.9470719980887459 (change=0.00467079392635261 %)
[2025-07-27 16:08:46] 2025-07-27 13:53:17,445 | INFO     | right removable region: 246
[2025-07-27 16:08:46] 2025-07-27 13:53:17,445 | INFO     | sum of square deviations: 4962187923.0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,447 | INFO     | sum of deviations: -58922130251.5
[2025-07-27 16:08:46] 2025-07-27 13:53:17,448 | INFO     | mean x: 1753616602.5
[2025-07-27 16:08:46] 2025-07-27 13:53:17,448 | INFO     | mean y: 2521394.98015873
[2025-07-27 16:08:46] 2025-07-27 13:53:17,448 | INFO     | -- intersect: 20825357504.18366
[2025-07-27 16:08:46] 2025-07-27 13:53:17,448 | INFO     | intersect: 20825357504.18366
[2025-07-27 16:08:46] 2025-07-27 13:53:17,448 | INFO     | chi2: 0.996627444503411
[2025-07-27 16:08:46] 2025-07-27 13:53:17,449 | INFO     | current chi2=0.996627444503411 (change=63.292981312308946 %)
[2025-07-27 16:08:46] 2025-07-27 13:53:17,449 | INFO     | sum of square deviations: 4672638308.0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,451 | INFO     | sum of deviations: -56659750387.0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,451 | INFO     | mean x: 1753616755.0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,451 | INFO     | mean y: 2520175.153846154
[2025-07-27 16:08:46] 2025-07-27 13:53:17,451 | INFO     | -- intersect: 21266628600.290897
[2025-07-27 16:08:46] 2025-07-27 13:53:17,451 | INFO     | intersect: 21266628600.290897
[2025-07-27 16:08:46] 2025-07-27 13:53:17,452 | INFO     | chi2: 0.982463503560813
[2025-07-27 16:08:46] 2025-07-27 13:53:17,452 | INFO     | current chi2=0.982463503560813 (change=1.421187126715685 %)
[2025-07-27 16:08:46] 2025-07-27 13:53:17,452 | INFO     | left removable region: 20
[2025-07-27 16:08:46] 2025-07-27 13:53:17,452 | INFO     | sum of square deviations: 3579276412.5
[2025-07-27 16:08:46] 2025-07-27 13:53:17,454 | INFO     | sum of deviations: -23467854913.000004
[2025-07-27 16:08:46] 2025-07-27 13:53:17,454 | INFO     | mean x: 1753616724.5
[2025-07-27 16:08:46] 2025-07-27 13:53:17,465 | INFO     | mean y: 2520380.053097345
[2025-07-27 16:08:46] 2025-07-27 13:53:17,465 | INFO     | -- intersect: 11500269679.284203
[2025-07-27 16:08:46] 2025-07-27 13:53:17,465 | INFO     | intersect: 11500269679.284203
[2025-07-27 16:08:46] 2025-07-27 13:53:17,465 | INFO     | chi2: 0.15112787477895298
[2025-07-27 16:08:46] 2025-07-27 13:53:17,466 | INFO     | -- intersect: 11500269679.284203
[2025-07-27 16:08:46] 2025-07-27 13:53:17,466 | INFO     | current memory leak: -6.56 B/s (using 226 data points, chi2=0.15)
[2025-07-27 16:08:46] 2025-07-27 13:53:17,467 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 16:08:46] 2025-07-27 13:53:17,467 | INFO     | ..............................
[2025-07-27 16:08:46] 2025-07-27 13:53:17,467 | INFO     | . Timing measurements:
[2025-07-27 16:08:46] 2025-07-27 13:53:17,467 | INFO     | . get job = 0 s
[2025-07-27 16:08:46] 2025-07-27 13:53:17,467 | INFO     | . initial setup = 2 s
[2025-07-27 16:08:46] 2025-07-27 13:53:17,467 | INFO     | . payload setup = 17 s
[2025-07-27 16:08:46] 2025-07-27 13:53:17,467 | INFO     | . stage-in = 0 s
[2025-07-27 16:08:46] 2025-07-27 13:53:17,467 | INFO     | . payload execution = 15701 s
[2025-07-27 16:08:46] 2025-07-27 13:53:17,467 | INFO     | . stage-out = 3 s
[2025-07-27 16:08:46] 2025-07-27 13:53:17,467 | INFO     | . log creation = 1 s
[2025-07-27 16:08:46] 2025-07-27 13:53:17,467 | INFO     | ..............................
[2025-07-27 16:08:46] 2025-07-27 13:53:17,611 | INFO     | 
[2025-07-27 16:08:46] 2025-07-27 13:53:17,611 | INFO     | job summary report
[2025-07-27 16:08:46] 2025-07-27 13:53:17,612 | INFO     | --------------------------------------------------
[2025-07-27 16:08:46] 2025-07-27 13:53:17,612 | INFO     | PanDA job id: 6745351401
[2025-07-27 16:08:46] 2025-07-27 13:53:17,612 | INFO     | task id: 45743349
[2025-07-27 16:08:46] 2025-07-27 13:53:17,612 | INFO     | errors: (none)
[2025-07-27 16:08:46] 2025-07-27 13:53:17,612 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:08:46] 2025-07-27 13:53:17,612 | INFO     | pilot state: finished 
[2025-07-27 16:08:46] 2025-07-27 13:53:17,612 | INFO     | transexitcode: 0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,612 | INFO     | exeerrorcode: 0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,612 | INFO     | exeerrordiag: 
[2025-07-27 16:08:46] 2025-07-27 13:53:17,612 | INFO     | exitcode: 0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,613 | INFO     | exitmsg: OK
[2025-07-27 16:08:46] 2025-07-27 13:53:17,613 | INFO     | cpuconsumptiontime: 61062 s
[2025-07-27 16:08:46] 2025-07-27 13:53:17,613 | INFO     | nevents: 400
[2025-07-27 16:08:46] 2025-07-27 13:53:17,613 | INFO     | neventsw: 0
[2025-07-27 16:08:46] 2025-07-27 13:53:17,613 | INFO     | pid: 28993
[2025-07-27 16:08:46] 2025-07-27 13:53:17,613 | INFO     | pgrp: 28993
[2025-07-27 16:08:46] 2025-07-27 13:53:17,613 | INFO     | corecount: 8
[2025-07-27 16:08:46] 2025-07-27 13:53:17,613 | INFO     | event service: False
[2025-07-27 16:08:46] 2025-07-27 13:53:17,613 | INFO     | sizes: {0: 2397475, 1: 2397475, 8: 2397765, 12: 2397793, 15722: 2428595, 15723: 2428594, 15728: 2437832, 15812: 2437970}
[2025-07-27 16:08:46] 2025-07-27 13:53:17,613 | INFO     | --------------------------------------------------
[2025-07-27 16:08:46] 2025-07-27 13:53:17,613 | INFO     | 
[2025-07-27 16:08:46] 2025-07-27 13:53:17,614 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-07-27 16:08:46] 2025-07-27 13:53:17,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,954 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,954 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,954 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,955 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:08:46] 2025-07-27 13:53:17,955 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,955 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:08:46] 2025-07-27 13:53:17,956 | INFO     | job 6745351401 has completed (purged errors)
[2025-07-27 16:08:46] 2025-07-27 13:53:17,956 | INFO     | overall cleanup function is called
[2025-07-27 16:08:46] 2025-07-27 13:53:18,965 | INFO     | --- collectZombieJob: --- 10, [28993]
[2025-07-27 16:08:46] 2025-07-27 13:53:18,965 | INFO     | zombie collector waiting for pid 28993
[2025-07-27 16:08:46] 2025-07-27 13:53:18,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:08:46] 2025-07-27 13:53:18,965 | INFO     | collected zombie processes
[2025-07-27 16:08:46] 2025-07-27 13:53:18,965 | INFO     | will attempt to kill all subprocesses of pid=28993
[2025-07-27 16:08:46] 2025-07-27 13:53:19,087 | INFO     | process IDs to be killed: [28993] (in reverse order)
[2025-07-27 16:08:46] 2025-07-27 13:53:19,367 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:08:46] 2025-07-27 13:53:19,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:08:46] 2025-07-27 13:53:19,371 | INFO     | did not find any defunct processes belonging to 28993
[2025-07-27 16:08:46] 2025-07-27 13:53:19,374 | INFO     | did not find any defunct processes belonging to 28993
[2025-07-27 16:08:46] 2025-07-27 13:53:19,375 | INFO     | ready for new job
[2025-07-27 16:08:46] 2025-07-27 13:53:19,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:08:46] 2025-07-27 13:53:19,377 | INFO     | ***************************************
[2025-07-27 16:08:46] 2025-07-27 13:53:19,377 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:08:46] 2025-07-27 13:53:19,377 | INFO     | ***************************************
[2025-07-27 16:08:46] 2025-07-27 13:53:19,377 | INFO     | 
[2025-07-27 16:08:46] 2025-07-27 13:53:19,378 | INFO     | pilot is running in a VM
[2025-07-27 16:08:46] 2025-07-27 13:53:19,378 | INFO     | architecture information:
[2025-07-27 16:08:46] 2025-07-27 13:53:19,380 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:08:46] 2025-07-27 13:53:19,617 | INFO     | cat /etc/os-release:
[2025-07-27 16:08:46] NAME="CentOS Linux"
[2025-07-27 16:08:46] VERSION="7 (Core)"
[2025-07-27 16:08:46] ID="centos"
[2025-07-27 16:08:46] ID_LIKE="rhel fedora"
[2025-07-27 16:08:46] VERSION_ID="7"
[2025-07-27 16:08:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:08:46] ANSI_COLOR="0;31"
[2025-07-27 16:08:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:08:46] HOME_URL="https://www.centos.org/"
[2025-07-27 16:08:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:08:46] 
[2025-07-27 16:08:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:08:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:08:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:08:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:08:46] 
[2025-07-27 16:08:46] 2025-07-27 13:53:19,618 | INFO     | ***************************************
[2025-07-27 16:08:46] 2025-07-27 13:53:20,121 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-07-27 16:08:46] 2025-07-27 13:53:20,356 | INFO     | sufficient remaining disk space (496474521600 B)
[2025-07-27 16:08:46] 2025-07-27 13:53:20,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:08:46] 2025-07-27 13:53:20,356 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:08:46] 2025-07-27 13:53:20,356 | INFO     | update_server=False
[2025-07-27 16:08:46] 2025-07-27 13:53:20,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:08:46] 2025-07-27 13:53:20,357 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:08:46] 2025-07-27 13:53:20,392 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 16:08:46] 2025-07-27 13:53:20,392 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 16:08:46] 2025-07-27 13:53:20,392 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:08:46] 2025-07-27 13:53:20,392 | INFO     | will abort loop
[2025-07-27 16:08:46] 2025-07-27 13:53:20,432 | INFO     | all payload control threads have been joined
[2025-07-27 16:08:46] 2025-07-27 13:53:20,979 | INFO     | all data control threads have been joined
[2025-07-27 16:08:46] 2025-07-27 13:53:21,112 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:08:46] 2025-07-27 13:53:21,363 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:21,370 | INFO     | all job control threads have been joined
[2025-07-27 16:08:46] 2025-07-27 13:53:21,399 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:21,438 | INFO     | [payload] control thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:21,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:21,657 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:21,945 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:21,985 | INFO     | [data] control thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:22,011 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:22,014 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:22,028 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:22,153 | INFO     | [job] validate thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:22,377 | INFO     | [job] control thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:22,625 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:08:46] 2025-07-27 13:53:22,812 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:23,119 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:23,630 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:24,369 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:08:46] 2025-07-27 13:53:25,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139881044207424)>', '<ExcThread(monitor, started 139880281655040)>']
[2025-07-27 16:08:46] 2025-07-27 13:53:30,508 | INFO     | all workflow threads have been joined
[2025-07-27 16:08:46] 2025-07-27 13:53:30,508 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:08:46] 2025-07-27 13:53:30,508 | INFO     | traces error code: 0
[2025-07-27 16:08:46] 2025-07-27 13:53:30,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:08:46] 2025-07-27 13:53:49,445 | INFO     | PID=19429 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 16:08:46] 2025-07-27 13:53:49,446 | INFO     | .. there are 9 such processes running
[2025-07-27 16:08:46] 2025-07-27 13:53:49,446 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:08:46] 2025-07-27 13:53:49,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:08:46] 2025-07-27 13:53:49,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:08:46] 2025-07-27 13:53:49,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:08:46] 2025-07-27 13:53:49,446 | INFO     | [monitor] control thread has ended
[2025-07-27 16:08:46] 2025-07-27 13:53:49,845 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:08:46] 2025-07-27 13:53:49,906 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:08:46] 2025-07-27 13:53:50,006 [wrapper] pilotpid: 19429
[2025-07-27 16:08:46] 2025-07-27 13:53:50,091 [wrapper] Pilot exit status: 0
[2025-07-27 16:08:46] 2025-07-27 13:53:50,625 [wrapper] pandaids: 6745351401
[2025-07-27 16:08:46] 2025-07-27 13:53:51,509 [wrapper] cleanup supervisor_pilot  3344 19430
[2025-07-27 16:08:46] 2025-07-27 13:53:51,618 [wrapper] Test setup, not cleaning
[2025-07-27 16:08:46] 2025-07-27 13:53:51,737 [wrapper] apfmon messages muted
[2025-07-27 16:08:46] 2025-07-27 13:53:51,787 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:08:46] 2025-07-27 13:53:51,880 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:08:46]  *** Error codes and diagnostics ***
[2025-07-27 16:08:46]     "exeErrorCode": 0,
[2025-07-27 16:08:46]     "exeErrorDiag": "",
[2025-07-27 16:08:46]     "pilotErrorCode": 0,
[2025-07-27 16:08:46]     "pilotErrorDiag": "",
[2025-07-27 16:08:46]  *** Listing of results directory ***
[2025-07-27 16:08:46] total 435032
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc    530466 Jul 26 19:41 pilot3.tar.gz
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc      5112 Jul 26 19:53 queuedata.json
[2025-07-27 16:08:46] -rwx------. 1 boinc boinc     36292 Jul 26 19:53 runpilot2-wrapper.sh
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc       100 Jul 27 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:08:46] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 11:29 run_atlas
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc       105 Jul 27 11:29 job.xml
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc      6390 Jul 27 11:29 init_data.xml
[2025-07-27 16:08:46] -rw-r--r--. 2 boinc boinc 229132059 Jul 27 11:29 EVNT.45743347._002365.pool.root.1
[2025-07-27 16:08:46] -rw-r--r--. 2 boinc boinc     15095 Jul 27 11:29 start_atlas.sh
[2025-07-27 16:08:46] drwxrwx--x. 2 boinc boinc        68 Jul 27 11:29 shared
[2025-07-27 16:08:46] -rw-r--r--. 2 boinc boinc    542899 Jul 27 11:29 input.tar.gz
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc         0 Jul 27 11:29 boinc_lockfile
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc      2563 Jul 27 11:29 pandaJob.out
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc    980125 Jul 27 11:29 agis_schedconf.cvmfs.json
[2025-07-27 16:08:46] drwx------. 4 boinc boinc      4096 Jul 27 11:29 pilot3
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc 208950786 Jul 27 15:50 HITS.45743349._041988.pool.root.1
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc       530 Jul 27 15:50 boinc_task_state.xml
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc      1017 Jul 27 15:51 memory_monitor_summary.json
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc   1593052 Jul 27 15:51 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc    405778 Jul 27 15:51 log.45743349._041988.job.log.tgz.1
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc        95 Jul 27 15:52 pilot_heartbeat.json
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc      7774 Jul 27 15:53 heartbeat.json
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc       820 Jul 27 15:53 pilotlog.txt
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc   1357000 Jul 27 15:53 log.45743349._041988.job.log.1
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc       357 Jul 27 15:53 output.list
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc       620 Jul 27 15:53 runtime_log
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc   1781760 Jul 27 15:53 result.tar.gz
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc      8660 Jul 27 15:53 runtime_log.err
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc       656 Jul 27 15:53 MwrMDmzGyz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3kSLDm7mkzKo.diag
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc      8192 Jul 27 16:08 boinc_mmap_file
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc        28 Jul 27 16:08 wrapper_checkpoint.txt
[2025-07-27 16:08:46] -rw-r--r--. 1 boinc boinc     20599 Jul 27 16:08 stderr.txt
[2025-07-27 16:08:46] HITS file was successfully produced:
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc 208950786 Jul 27 15:50 shared/HITS.pool.root.1
[2025-07-27 16:08:46]  *** Contents of shared directory: ***
[2025-07-27 16:08:46] total 430108
[2025-07-27 16:08:46] -rw-r--r--. 2 boinc boinc 229132059 Jul 27 11:29 ATLAS.root_0
[2025-07-27 16:08:46] -rw-r--r--. 2 boinc boinc     15095 Jul 27 11:29 start_atlas.sh
[2025-07-27 16:08:46] -rw-r--r--. 2 boinc boinc    542899 Jul 27 11:29 input.tar.gz
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc 208950786 Jul 27 15:50 HITS.pool.root.1
[2025-07-27 16:08:46] -rw-------. 1 boinc boinc   1781760 Jul 27 15:53 result.tar.gz
16:08:48 (15752): run_atlas exited; CPU time 61250.937306
16:08:48 (15752): called boinc_finish(0)

</stderr_txt>
]]>

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