Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:49:42 (31724): wrapper (7.7.26015): starting
10:49:42 (31724): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 10:49:42] Arguments: --nthreads 8
[2025-07-27 10:49:42] Threads: 8
[2025-07-27 10:49:42] Checking for CVMFS
[2025-07-27 10:49:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 10:49:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 10:49:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 10:49:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 10:49:44] 2.11.2.0 3966 109297 137440 148805 2 161 21452277 25165824 4353 130560 0 77506633 99.859 48461035 3352 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 10:49:44] CVMFS is ok
[2025-07-27 10:49:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 10:49:44] Checking for apptainer binary...
[2025-07-27 10:49:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 10:49:44] Running /usr/bin/apptainer --version
[2025-07-27 10:49:44] apptainer version 1.3.2-1.el7
[2025-07-27 10:49:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 10:49:45] cg-vwn439.simple-grid.lan
[2025-07-27 10:49:45] apptainer works
[2025-07-27 10:49:45] Set ATHENA_PROC_NUMBER=8
[2025-07-27 10:49:45] Set ATHENA_CORE_NUMBER=8
[2025-07-27 10:49:45] Starting ATLAS job with PandaID=6745351508
[2025-07-27 10:49:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:51:44]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:51:44] 2025-07-27 13:27:53,243 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:51:44] 2025-07-27 13:27:53,243 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:51:44] 2025-07-27 13:27:53,249 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:51:44] 2025-07-27 13:27:53,250 | INFO     | sum of square deviations: 6171352920.0
[2025-07-27 16:51:44] 2025-07-27 13:27:53,257 | INFO     | sum of deviations: 23213551098.00004
[2025-07-27 16:51:44] 2025-07-27 13:27:53,257 | INFO     | mean x: 1753614496.0
[2025-07-27 16:51:44] 2025-07-27 13:27:53,257 | INFO     | mean y: 2490868.5313653136
[2025-07-27 16:51:44] 2025-07-27 13:27:53,258 | INFO     | -- intersect: -6593732072.659556
[2025-07-27 16:51:44] 2025-07-27 13:27:53,258 | INFO     | intersect: -6593732072.659556
[2025-07-27 16:51:44] 2025-07-27 13:27:53,258 | INFO     | chi2: 2.4502665152974434
[2025-07-27 16:51:44] 2025-07-27 13:27:53,259 | INFO     | sum of square deviations: 5836025702.5
[2025-07-27 16:51:44] 2025-07-27 13:27:53,275 | INFO     | sum of deviations: 40351486183.5
[2025-07-27 16:51:44] 2025-07-27 13:27:53,276 | INFO     | mean x: 1753614343.5
[2025-07-27 16:51:44] 2025-07-27 13:27:53,276 | INFO     | mean y: 2498539.537593985
[2025-07-27 16:51:44] 2025-07-27 13:27:53,276 | INFO     | -- intersect: -12122352953.596775
[2025-07-27 16:51:44] 2025-07-27 13:27:53,276 | INFO     | intersect: -12122352953.596775
[2025-07-27 16:51:44] 2025-07-27 13:27:53,276 | INFO     | chi2: 1.6822498861310178
[2025-07-27 16:51:44] 2025-07-27 13:27:53,276 | INFO     | current chi2=1.6822498861310178 (change=31.344207839088657 %)
[2025-07-27 16:51:44] 2025-07-27 13:27:53,277 | INFO     | sum of square deviations: 5513070810.0
[2025-07-27 16:51:44] 2025-07-27 13:27:53,279 | INFO     | sum of deviations: 39183768703.99999
[2025-07-27 16:51:44] 2025-07-27 13:27:53,279 | INFO     | mean x: 1753614191.0
[2025-07-27 16:51:44] 2025-07-27 13:27:53,279 | INFO     | mean y: 2497988.256704981
[2025-07-27 16:51:44] 2025-07-27 13:27:53,280 | INFO     | -- intersect: -12461193341.729326
[2025-07-27 16:51:44] 2025-07-27 13:27:53,280 | INFO     | intersect: -12461193341.729326
[2025-07-27 16:51:44] 2025-07-27 13:27:53,280 | INFO     | chi2: 1.6829941592302282
[2025-07-27 16:51:44] 2025-07-27 13:27:53,280 | INFO     | current chi2=1.6829941592302282 (change=-0.0442427195475803 %)
[2025-07-27 16:51:44] 2025-07-27 13:27:53,280 | INFO     | right removable region: 260
[2025-07-27 16:51:44] 2025-07-27 13:27:53,281 | INFO     | sum of square deviations: 5836025702.5
[2025-07-27 16:51:44] 2025-07-27 13:27:53,283 | INFO     | sum of deviations: -23280106672.999985
[2025-07-27 16:51:44] 2025-07-27 13:27:53,283 | INFO     | mean x: 1753614648.5
[2025-07-27 16:51:44] 2025-07-27 13:27:53,283 | INFO     | mean y: 2511866.2781954887
[2025-07-27 16:51:44] 2025-07-27 13:27:53,283 | INFO     | -- intersect: 6997740839.126499
[2025-07-27 16:51:44] 2025-07-27 13:27:53,284 | INFO     | intersect: 6997740839.126499
[2025-07-27 16:51:44] 2025-07-27 13:27:53,284 | INFO     | chi2: 0.9021201520261194
[2025-07-27 16:51:44] 2025-07-27 13:27:53,284 | INFO     | current chi2=0.9021201520261194 (change=63.182774347442404 %)
[2025-07-27 16:51:44] 2025-07-27 13:27:53,285 | INFO     | sum of square deviations: 5513070810.0
[2025-07-27 16:51:44] 2025-07-27 13:27:53,291 | INFO     | sum of deviations: -22553319123.000004
[2025-07-27 16:51:44] 2025-07-27 13:27:53,291 | INFO     | mean x: 1753614801.0
[2025-07-27 16:51:44] 2025-07-27 13:27:53,291 | INFO     | mean y: 2511498.195402299
[2025-07-27 16:51:44] 2025-07-27 13:27:53,292 | INFO     | -- intersect: 7176341762.452274
[2025-07-27 16:51:44] 2025-07-27 13:27:53,292 | INFO     | intersect: 7176341762.452274
[2025-07-27 16:51:44] 2025-07-27 13:27:53,292 | INFO     | chi2: 0.8872181921895693
[2025-07-27 16:51:44] 2025-07-27 13:27:53,292 | INFO     | current chi2=0.8872181921895693 (change=1.651881936467218 %)
[2025-07-27 16:51:44] 2025-07-27 13:27:53,292 | INFO     | left removable region: 20
[2025-07-27 16:51:44] 2025-07-27 13:27:53,293 | INFO     | sum of square deviations: 4286517580.0
[2025-07-27 16:51:44] 2025-07-27 13:27:53,295 | INFO     | sum of deviations: 11707496644.500002
[2025-07-27 16:51:44] 2025-07-27 13:27:53,295 | INFO     | mean x: 1753614770.5
[2025-07-27 16:51:44] 2025-07-27 13:27:53,295 | INFO     | mean y: 2510220.5125
[2025-07-27 16:51:44] 2025-07-27 13:27:53,295 | INFO     | -- intersect: -4787027827.147716
[2025-07-27 16:51:44] 2025-07-27 13:27:53,295 | INFO     | intersect: -4787027827.147716
[2025-07-27 16:51:44] 2025-07-27 13:27:53,296 | INFO     | chi2: 0.012994069967598687
[2025-07-27 16:51:44] 2025-07-27 13:27:53,296 | INFO     | -- intersect: -4787027827.147716
[2025-07-27 16:51:44] 2025-07-27 13:27:53,296 | INFO     | current memory leak: 2.73 B/s (using 240 data points, chi2=0.01)
[2025-07-27 16:51:44] 2025-07-27 13:27:53,297 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 16:51:44] 2025-07-27 13:27:53,297 | INFO     | ..............................
[2025-07-27 16:51:44] 2025-07-27 13:27:53,297 | INFO     | . Timing measurements:
[2025-07-27 16:51:44] 2025-07-27 13:27:53,297 | INFO     | . get job = 0 s
[2025-07-27 16:51:44] 2025-07-27 13:27:53,297 | INFO     | . initial setup = 2 s
[2025-07-27 16:51:44] 2025-07-27 13:27:53,297 | INFO     | . payload setup = 11 s
[2025-07-27 16:51:44] 2025-07-27 13:27:53,298 | INFO     | . stage-in = 0 s
[2025-07-27 16:51:44] 2025-07-27 13:27:53,298 | INFO     | . payload execution = 16522 s
[2025-07-27 16:51:44] 2025-07-27 13:27:53,298 | INFO     | . stage-out = 3 s
[2025-07-27 16:51:44] 2025-07-27 13:27:53,298 | INFO     | . log creation = 1 s
[2025-07-27 16:51:44] 2025-07-27 13:27:53,298 | INFO     | ..............................
[2025-07-27 16:51:44] 2025-07-27 13:27:53,481 | INFO     | 
[2025-07-27 16:51:44] 2025-07-27 13:27:53,481 | INFO     | job summary report
[2025-07-27 16:51:44] 2025-07-27 13:27:53,481 | INFO     | --------------------------------------------------
[2025-07-27 16:51:44] 2025-07-27 13:27:53,482 | INFO     | PanDA job id: 6745351508
[2025-07-27 16:51:44] 2025-07-27 13:27:53,482 | INFO     | task id: 45743349
[2025-07-27 16:51:44] 2025-07-27 13:27:53,482 | INFO     | errors: (none)
[2025-07-27 16:51:44] 2025-07-27 13:27:53,482 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:51:44] 2025-07-27 13:27:53,482 | INFO     | pilot state: finished 
[2025-07-27 16:51:44] 2025-07-27 13:27:53,482 | INFO     | transexitcode: 0
[2025-07-27 16:51:44] 2025-07-27 13:27:53,482 | INFO     | exeerrorcode: 0
[2025-07-27 16:51:44] 2025-07-27 13:27:53,482 | INFO     | exeerrordiag: 
[2025-07-27 16:51:44] 2025-07-27 13:27:53,482 | INFO     | exitcode: 0
[2025-07-27 16:51:44] 2025-07-27 13:27:53,482 | INFO     | exitmsg: OK
[2025-07-27 16:51:44] 2025-07-27 13:27:53,482 | INFO     | cpuconsumptiontime: 62948 s
[2025-07-27 16:51:44] 2025-07-27 13:27:53,483 | INFO     | nevents: 400
[2025-07-27 16:51:44] 2025-07-27 13:27:53,483 | INFO     | neventsw: 0
[2025-07-27 16:51:44] 2025-07-27 13:27:53,483 | INFO     | pid: 9976
[2025-07-27 16:51:44] 2025-07-27 13:27:53,483 | INFO     | pgrp: 9976
[2025-07-27 16:51:44] 2025-07-27 13:27:53,483 | INFO     | corecount: 8
[2025-07-27 16:51:44] 2025-07-27 13:27:53,483 | INFO     | event service: False
[2025-07-27 16:51:44] 2025-07-27 13:27:53,483 | INFO     | sizes: {0: 2396646, 1: 2397502, 2: 2397502, 10: 2397792, 12: 2397820, 16538: 2429284, 16542: 2438282, 16544: 2438338, 16645: 2438532}
[2025-07-27 16:51:44] 2025-07-27 13:27:53,483 | INFO     | --------------------------------------------------
[2025-07-27 16:51:44] 2025-07-27 13:27:53,483 | INFO     | 
[2025-07-27 16:51:44] 2025-07-27 13:27:53,483 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-07-27 16:51:44] 2025-07-27 13:27:53,924 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,924 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,926 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:51:44] 2025-07-27 13:27:53,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,926 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:51:44] 2025-07-27 13:27:53,926 | INFO     | job 6745351508 has completed (purged errors)
[2025-07-27 16:51:44] 2025-07-27 13:27:53,927 | INFO     | overall cleanup function is called
[2025-07-27 16:51:44] 2025-07-27 13:27:54,936 | INFO     | --- collectZombieJob: --- 10, [9976]
[2025-07-27 16:51:44] 2025-07-27 13:27:54,936 | INFO     | zombie collector waiting for pid 9976
[2025-07-27 16:51:44] 2025-07-27 13:27:54,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:51:44] 2025-07-27 13:27:54,937 | INFO     | collected zombie processes
[2025-07-27 16:51:44] 2025-07-27 13:27:54,937 | INFO     | will attempt to kill all subprocesses of pid=9976
[2025-07-27 16:51:44] 2025-07-27 13:27:55,059 | INFO     | process IDs to be killed: [9976] (in reverse order)
[2025-07-27 16:51:44] 2025-07-27 13:27:55,756 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:51:44] 2025-07-27 13:27:55,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:51:44] 2025-07-27 13:27:55,760 | INFO     | did not find any defunct processes belonging to 9976
[2025-07-27 16:51:44] 2025-07-27 13:27:55,763 | INFO     | did not find any defunct processes belonging to 9976
[2025-07-27 16:51:44] 2025-07-27 13:27:55,763 | INFO     | ready for new job
[2025-07-27 16:51:44] 2025-07-27 13:27:55,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:51:44] 2025-07-27 13:27:55,766 | INFO     | ***************************************
[2025-07-27 16:51:44] 2025-07-27 13:27:55,766 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:51:44] 2025-07-27 13:27:55,766 | INFO     | ***************************************
[2025-07-27 16:51:44] 2025-07-27 13:27:55,766 | INFO     | 
[2025-07-27 16:51:44] 2025-07-27 13:27:55,767 | INFO     | pilot is running in a VM
[2025-07-27 16:51:44] 2025-07-27 13:27:55,767 | INFO     | architecture information:
[2025-07-27 16:51:44] 2025-07-27 13:27:55,781 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:51:44] 2025-07-27 13:27:56,089 | INFO     | cat /etc/os-release:
[2025-07-27 16:51:44] NAME="CentOS Linux"
[2025-07-27 16:51:44] VERSION="7 (Core)"
[2025-07-27 16:51:44] ID="centos"
[2025-07-27 16:51:44] ID_LIKE="rhel fedora"
[2025-07-27 16:51:44] VERSION_ID="7"
[2025-07-27 16:51:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:51:44] ANSI_COLOR="0;31"
[2025-07-27 16:51:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:51:44] HOME_URL="https://www.centos.org/"
[2025-07-27 16:51:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:51:44] 
[2025-07-27 16:51:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:51:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:51:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:51:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:51:44] 
[2025-07-27 16:51:44] 2025-07-27 13:27:56,089 | INFO     | ***************************************
[2025-07-27 16:51:44] 2025-07-27 13:27:56,593 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-07-27 16:51:44] 2025-07-27 13:27:56,750 | INFO     | sufficient remaining disk space (496738762752 B)
[2025-07-27 16:51:44] 2025-07-27 13:27:56,751 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:51:44] 2025-07-27 13:27:56,751 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:51:44] 2025-07-27 13:27:56,751 | INFO     | update_server=False
[2025-07-27 16:51:44] 2025-07-27 13:27:56,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:51:44] 2025-07-27 13:27:56,851 | INFO     | all data control threads have been joined
[2025-07-27 16:51:44] 2025-07-27 13:27:57,093 | INFO     | all payload control threads have been joined
[2025-07-27 16:51:44] 2025-07-27 13:27:57,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:51:44] 2025-07-27 13:27:57,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:51:44] 2025-07-27 13:27:57,581 | INFO     | aborting loop
[2025-07-27 16:51:44] 2025-07-27 13:27:57,757 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:57,857 | INFO     | [data] control thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:57,889 | INFO     | [job] validate thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:57,896 | INFO     | all job control threads have been joined
[2025-07-27 16:51:44] 2025-07-27 13:27:57,999 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:58,066 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:58,099 | INFO     | [payload] control thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:58,149 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:58,191 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:58,286 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:58,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:51:44] 2025-07-27 13:27:58,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:51:44] 2025-07-27 13:27:58,587 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:58,626 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:58,902 | INFO     | [job] control thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:59,141 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:59,163 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:27:59,506 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:28:02,487 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:51:44] 2025-07-27 13:28:03,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140672175572800)>', '<ExcThread(monitor, started 140671872636672)>']
[2025-07-27 16:51:44] 2025-07-27 13:28:08,193 | INFO     | all workflow threads have been joined
[2025-07-27 16:51:44] 2025-07-27 13:28:08,193 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:51:44] 2025-07-27 13:28:08,194 | INFO     | traces error code: 0
[2025-07-27 16:51:44] 2025-07-27 13:28:08,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:51:44] 2025-07-27 13:28:26,553 | INFO     | PID=3354 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 16:51:44] 2025-07-27 13:28:26,553 | INFO     | .. there are 9 such processes running
[2025-07-27 16:51:44] 2025-07-27 13:28:26,554 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:51:44] 2025-07-27 13:28:26,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:51:44] 2025-07-27 13:28:26,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:51:44] 2025-07-27 13:28:26,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:51:44] 2025-07-27 13:28:26,554 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 16:51:44] 2025-07-27 13:28:26,554 | INFO     | [monitor] control thread has ended
[2025-07-27 16:51:44] 2025-07-27 13:28:26,989 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:51:44] 2025-07-27 13:28:27,071 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:51:44] 2025-07-27 13:28:27,121 [wrapper] pilotpid: 3354
[2025-07-27 16:51:44] 2025-07-27 13:28:27,217 [wrapper] Pilot exit status: 0
[2025-07-27 16:51:44] 2025-07-27 13:28:27,728 [wrapper] pandaids: 6745351508
[2025-07-27 16:51:44] 2025-07-27 13:28:28,343 [wrapper] cleanup supervisor_pilot  5098 3355
[2025-07-27 16:51:44] 2025-07-27 13:28:28,377 [wrapper] Test setup, not cleaning
[2025-07-27 16:51:44] 2025-07-27 13:28:28,425 [wrapper] apfmon messages muted
[2025-07-27 16:51:44] 2025-07-27 13:28:28,503 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:51:44] 2025-07-27 13:28:28,564 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:51:44]  *** Error codes and diagnostics ***
[2025-07-27 16:51:44]     "exeErrorCode": 0,
[2025-07-27 16:51:44]     "exeErrorDiag": "",
[2025-07-27 16:51:44]     "pilotErrorCode": 0,
[2025-07-27 16:51:44]     "pilotErrorDiag": "",
[2025-07-27 16:51:44]  *** Listing of results directory ***
[2025-07-27 16:51:44] total 355904
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc    530466 Jul 26 19:41 pilot3.tar.gz
[2025-07-27 16:51:44] -rwx------. 1 boinc boinc     36292 Jul 26 19:59 runpilot2-wrapper.sh
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc      5112 Jul 26 19:59 queuedata.json
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc       100 Jul 27 10:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:51:44] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 10:49 run_atlas
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc       105 Jul 27 10:49 job.xml
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc      6392 Jul 27 10:49 init_data.xml
[2025-07-27 16:51:44] -rw-r--r--. 2 boinc boinc 145425947 Jul 27 10:49 EVNT.45743347._002371.pool.root.1
[2025-07-27 16:51:44] -rw-r--r--. 2 boinc boinc     15095 Jul 27 10:49 start_atlas.sh
[2025-07-27 16:51:44] drwxrwx--x. 2 boinc boinc        68 Jul 27 10:49 shared
[2025-07-27 16:51:44] -rw-r--r--. 2 boinc boinc    542884 Jul 27 10:49 input.tar.gz
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc         0 Jul 27 10:49 boinc_lockfile
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc      2562 Jul 27 10:49 pandaJob.out
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc    980109 Jul 27 10:50 agis_schedconf.cvmfs.json
[2025-07-27 16:51:44] drwx------. 4 boinc boinc      4096 Jul 27 10:50 pilot3
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc 211492634 Jul 27 15:24 HITS.45743349._042095.pool.root.1
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc       531 Jul 27 15:25 boinc_task_state.xml
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc      1020 Jul 27 15:26 memory_monitor_summary.json
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc   1593052 Jul 27 15:26 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc    408342 Jul 27 15:26 log.45743349._042095.job.log.tgz.1
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc        95 Jul 27 15:27 pilot_heartbeat.json
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc      7777 Jul 27 15:27 heartbeat.json
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc       889 Jul 27 15:28 pilotlog.txt
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc   1424013 Jul 27 15:28 log.45743349._042095.job.log.1
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc       357 Jul 27 15:28 output.list
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc       620 Jul 27 15:28 runtime_log
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc   1853440 Jul 27 15:28 result.tar.gz
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc      8660 Jul 27 15:28 runtime_log.err
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc       657 Jul 27 15:28 c1UNDmtLyz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9lSLDmwcrSKo.diag
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc      8192 Jul 27 16:51 boinc_mmap_file
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc        28 Jul 27 16:51 wrapper_checkpoint.txt
[2025-07-27 16:51:44] -rw-r--r--. 1 boinc boinc     20574 Jul 27 16:51 stderr.txt
[2025-07-27 16:51:44] HITS file was successfully produced:
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc 211492634 Jul 27 15:24 shared/HITS.pool.root.1
[2025-07-27 16:51:44]  *** Contents of shared directory: ***
[2025-07-27 16:51:44] total 350916
[2025-07-27 16:51:44] -rw-r--r--. 2 boinc boinc 145425947 Jul 27 10:49 ATLAS.root_0
[2025-07-27 16:51:44] -rw-r--r--. 2 boinc boinc     15095 Jul 27 10:49 start_atlas.sh
[2025-07-27 16:51:44] -rw-r--r--. 2 boinc boinc    542884 Jul 27 10:49 input.tar.gz
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc 211492634 Jul 27 15:24 HITS.pool.root.1
[2025-07-27 16:51:44] -rw-------. 1 boinc boinc   1853440 Jul 27 15:28 result.tar.gz
16:51:46 (31724): run_atlas exited; CPU time 63162.959944
16:51:46 (31724): called boinc_finish(0)

</stderr_txt>
]]>

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