Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:07:14 (1234531): wrapper (7.7.26015): starting
19:07:14 (1234531): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 19:07:14] Arguments: --nthreads 8
[2025-07-26 19:07:14] Threads: 8
[2025-07-26 19:07:14] Checking for CVMFS
[2025-07-26 19:07:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 19:07:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 19:07:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 19:07:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 19:07:15] 2.13.1.0 1173468 12135 209968 148792 1 196 35829160 40960001 8544 16776704 0 48582403 99.869 24026072 40880 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 19:07:15] CVMFS is ok
[2025-07-26 19:07:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 19:07:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 19:07:15] Further information can be found at the LHC@home message board.
[2025-07-26 19:07:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 19:07:15] Checking for apptainer binary...
[2025-07-26 19:07:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 19:07:15] Running /usr/bin/apptainer --version
[2025-07-26 19:07:15] apptainer version 1.4.1-1.el9
[2025-07-26 19:07:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 19:07:15] c-212-20.aglt2.org
[2025-07-26 19:07:15] apptainer works
[2025-07-26 19:07:15] Set ATHENA_PROC_NUMBER=8
[2025-07-26 19:07:15] Set ATHENA_CORE_NUMBER=8
[2025-07-26 19:07:15] Starting ATLAS job with PandaID=6745351007
[2025-07-26 19:07:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 20:22:02]  *** The last 200 lines of the pilot log: ***
[2025-07-26 20:22:02]  mtime=0
[2025-07-26 20:22:02]  protocol_id=None
[2025-07-26 20:22:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 20:22:02]  replicas=None
[2025-07-26 20:22:02]  scope=mc23_13p6TeV
[2025-07-26 20:22:02]  status=None
[2025-07-26 20:22:02]  status_code=0
[2025-07-26 20:22:02]  storage_token=
[2025-07-26 20:22:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745351007/log.45743349._041920.job.log.tgz.1
[2025-07-26 20:22:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/7c/log.45743349._041920.job.log.tgz.1
[2025-07-26 20:22:02]  workdir=None
[2025-07-26 20:22:02] ]
[2025-07-26 20:22:02] 2025-07-27 00:21:21,042 | INFO     | transferring file log.45743349._041920.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745351007/log.45743349._041920.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 20:22:02] 2025-07-27 00:21:21,042 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745351007/log.45743349._041920.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._041920.job
[2025-07-26 20:22:02] 2025-07-27 00:21:21,060 | INFO     | adding to output.list: log.45743349._041920.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/7c/log.45743349._041920.job.log.tg
[2025-07-26 20:22:02] 2025-07-27 00:21:21,061 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 20:22:02] 2025-07-27 00:21:21,061 | INFO     | summary of transferred files:
[2025-07-26 20:22:02] 2025-07-27 00:21:21,061 | INFO     |  -- lfn=log.45743349._041920.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 20:22:02] 2025-07-27 00:21:21,061 | INFO     | stage-out finished correctly
[2025-07-26 20:22:02] 2025-07-27 00:21:21,819 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 20:22:02] 2025-07-27 00:21:24,774 | INFO     | job 6745351007 has state=finished
[2025-07-26 20:22:02] 2025-07-27 00:21:24,775 | INFO     | preparing for final server update for job 6745351007 in state='finished'
[2025-07-26 20:22:02] 2025-07-27 00:21:24,832 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-26 20:22:02] 2025-07-27 00:21:24,832 | INFO     | this job has now completed (state=finished)
[2025-07-26 20:22:02] 2025-07-27 00:21:24,832 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 20:22:02] 2025-07-27 00:21:24,833 | INFO     | log transfer has been attempted: DONE
[2025-07-26 20:22:02] 2025-07-27 00:21:24,833 | INFO     | job 6745351007 has finished - writing final server update
[2025-07-26 20:22:02] 2025-07-27 00:21:24,833 | INFO     | total number of processed events: 400 (read)
[2025-07-26 20:22:02] 2025-07-27 00:21:24,834 | INFO     | executing command: lscpu
[2025-07-26 20:22:02] 2025-07-27 00:21:24,895 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 20:22:02] 2025-07-27 00:21:25,119 | WARNING  | process 1244540 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 20:22:02] 2025-07-27 00:21:25,120 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745351007/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 20:22:02] 2025-07-27 00:21:25,459 | INFO     | number of running child processes to parent process 1244540: 1
[2025-07-26 20:22:02] 2025-07-27 00:21:25,460 | INFO     | maximum number of monitored processes: 6
[2025-07-26 20:22:02] 2025-07-27 00:21:27,962 | INFO     | monitor loop #328: job 0:6745351007 is in state 'finished'
[2025-07-26 20:22:02] 2025-07-27 00:21:27,962 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:22:02] 2025-07-27 00:21:28,921 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 20:22:02] 2025-07-27 00:21:28,932 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3203.359354166667
[2025-07-26 20:22:02] 2025-07-27 00:21:28,947 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745351007/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 20:22:02] 2025-07-27 00:21:28,948 | INFO     | extracted standard info from prmon json
[2025-07-26 20:22:02] 2025-07-27 00:21:28,948 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 20:22:02] 2025-07-27 00:21:28,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 20:22:02] 2025-07-27 00:21:28,948 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 20:22:02] 2025-07-27 00:21:28,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:22:02] 2025-07-27 00:21:28,950 | INFO     | fitting pss+swap vs Time
[2025-07-26 20:22:02] 2025-07-27 00:21:28,951 | INFO     | sum of square deviations: 89127252.5
[2025-07-26 20:22:02] 2025-07-27 00:21:28,951 | INFO     | sum of deviations: -648200670.4999998
[2025-07-26 20:22:02] 2025-07-27 00:21:28,951 | INFO     | mean x: 1753573556.5
[2025-07-26 20:22:02] 2025-07-27 00:21:28,951 | INFO     | mean y: 2556453.0454545454
[2025-07-26 20:22:02] 2025-07-27 00:21:28,951 | INFO     | -- intersect: 12755867289.081482
[2025-07-26 20:22:02] 2025-07-27 00:21:28,951 | INFO     | intersect: 12755867289.081482
[2025-07-26 20:22:02] 2025-07-27 00:21:28,952 | INFO     | chi2: 0.01717787680966103
[2025-07-26 20:22:02] 2025-07-27 00:21:28,952 | INFO     | -- intersect: 12755867289.081482
[2025-07-26 20:22:02] 2025-07-27 00:21:28,952 | INFO     | current memory leak: -7.27 B/s (using 66 data points, chi2=0.02)
[2025-07-26 20:22:02] 2025-07-27 00:21:28,952 | INFO     | could have reported an average CPU frequency of 3231 MHz (6 samples)
[2025-07-26 20:22:02] 2025-07-27 00:21:28,952 | INFO     | ..............................
[2025-07-26 20:22:02] 2025-07-27 00:21:28,952 | INFO     | . Timing measurements:
[2025-07-26 20:22:02] 2025-07-27 00:21:28,952 | INFO     | . get job = 0 s
[2025-07-26 20:22:02] 2025-07-27 00:21:28,953 | INFO     | . initial setup = 2 s
[2025-07-26 20:22:02] 2025-07-27 00:21:28,953 | INFO     | . payload setup = 5 s
[2025-07-26 20:22:02] 2025-07-27 00:21:28,953 | INFO     | . stage-in = 0 s
[2025-07-26 20:22:02] 2025-07-27 00:21:28,953 | INFO     | . payload execution = 4412 s
[2025-07-26 20:22:02] 2025-07-27 00:21:28,953 | INFO     | . stage-out = 0 s
[2025-07-26 20:22:02] 2025-07-27 00:21:28,953 | INFO     | . log creation = 0 s
[2025-07-26 20:22:02] 2025-07-27 00:21:28,953 | INFO     | ..............................
[2025-07-26 20:22:02] 2025-07-27 00:21:29,481 | INFO     | 
[2025-07-26 20:22:02] 2025-07-27 00:21:29,481 | INFO     | job summary report
[2025-07-26 20:22:02] 2025-07-27 00:21:29,481 | INFO     | --------------------------------------------------
[2025-07-26 20:22:02] 2025-07-27 00:21:29,481 | INFO     | PanDA job id: 6745351007
[2025-07-26 20:22:02] 2025-07-27 00:21:29,481 | INFO     | task id: 45743349
[2025-07-26 20:22:02] 2025-07-27 00:21:29,481 | INFO     | errors: (none)
[2025-07-26 20:22:02] 2025-07-27 00:21:29,481 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 20:22:02] 2025-07-27 00:21:29,481 | INFO     | pilot state: finished 
[2025-07-26 20:22:02] 2025-07-27 00:21:29,481 | INFO     | transexitcode: 0
[2025-07-26 20:22:02] 2025-07-27 00:21:29,481 | INFO     | exeerrorcode: 0
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | exeerrordiag: 
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | exitcode: 0
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | exitmsg: OK
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | cpuconsumptiontime: 32563 s
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | nevents: 400
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | neventsw: 0
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | pid: 1244540
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | pgrp: 1244540
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | corecount: 8
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | event service: False
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | sizes: {0: 2397248, 1: 2397503, 5: 2397765, 11: 2397821, 4421: 2423966, 4422: 2432964, 4423: 2433148, 4430: 2433342}
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | --------------------------------------------------
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | 
[2025-07-26 20:22:02] 2025-07-27 00:21:29,482 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 20:22:02] 2025-07-27 00:21:29,499 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,499 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 20:22:02] 2025-07-27 00:21:29,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,500 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 20:22:02] 2025-07-27 00:21:29,500 | INFO     | job 6745351007 has completed (purged errors)
[2025-07-26 20:22:02] 2025-07-27 00:21:29,500 | INFO     | overall cleanup function is called
[2025-07-26 20:22:02] 2025-07-27 00:21:30,508 | INFO     | --- collectZombieJob: --- 10, [1244540]
[2025-07-26 20:22:02] 2025-07-27 00:21:30,508 | INFO     | zombie collector waiting for pid 1244540
[2025-07-26 20:22:02] 2025-07-27 00:21:30,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 20:22:02] 2025-07-27 00:21:30,508 | INFO     | collected zombie processes
[2025-07-26 20:22:02] 2025-07-27 00:21:30,508 | INFO     | will attempt to kill all subprocesses of pid=1244540
[2025-07-26 20:22:02] 2025-07-27 00:21:30,804 | INFO     | process IDs to be killed: [1244540] (in reverse order)
[2025-07-26 20:22:02] 2025-07-27 00:21:30,894 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 20:22:02] 2025-07-27 00:21:30,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 20:22:02] 2025-07-27 00:21:30,906 | INFO     | did not find any defunct processes belonging to 1244540
[2025-07-26 20:22:02] 2025-07-27 00:21:30,914 | INFO     | did not find any defunct processes belonging to 1244540
[2025-07-26 20:22:02] 2025-07-27 00:21:30,914 | INFO     | ready for new job
[2025-07-26 20:22:02] 2025-07-27 00:21:30,914 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 20:22:02] 2025-07-27 00:21:30,915 | INFO     | ***************************************
[2025-07-26 20:22:02] 2025-07-27 00:21:30,915 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 20:22:02] 2025-07-27 00:21:30,915 | INFO     | ***************************************
[2025-07-26 20:22:02] 2025-07-27 00:21:30,915 | INFO     | 
[2025-07-26 20:22:02] 2025-07-27 00:21:30,919 | INFO     | architecture information:
[2025-07-26 20:22:02] 2025-07-27 00:21:30,919 | INFO     | executing command: cat /etc/os-release
[2025-07-26 20:22:02] 2025-07-27 00:21:30,938 | INFO     | cat /etc/os-release:
[2025-07-26 20:22:02] NAME="CentOS Linux"
[2025-07-26 20:22:02] VERSION="7 (Core)"
[2025-07-26 20:22:02] ID="centos"
[2025-07-26 20:22:02] ID_LIKE="rhel fedora"
[2025-07-26 20:22:02] VERSION_ID="7"
[2025-07-26 20:22:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 20:22:02] ANSI_COLOR="0;31"
[2025-07-26 20:22:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 20:22:02] HOME_URL="https://www.centos.org/"
[2025-07-26 20:22:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 20:22:02] 
[2025-07-26 20:22:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 20:22:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 20:22:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 20:22:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 20:22:02] 
[2025-07-26 20:22:02] 2025-07-27 00:21:30,939 | INFO     | ***************************************
[2025-07-26 20:22:02] 2025-07-27 00:21:31,441 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 20:22:02] 2025-07-27 00:21:31,453 | INFO     | sufficient remaining disk space (128623575040 B)
[2025-07-26 20:22:02] 2025-07-27 00:21:31,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 20:22:02] 2025-07-27 00:21:31,454 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 20:22:02] 2025-07-27 00:21:31,454 | INFO     | update_server=False
[2025-07-26 20:22:02] 2025-07-27 00:21:31,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 20:22:02] 2025-07-27 00:21:31,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:22:02] 2025-07-27 00:21:31,475 | INFO     | aborting loop
[2025-07-26 20:22:02] 2025-07-27 00:21:31,637 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 20:22:02] 2025-07-27 00:21:31,683 | INFO     | all payload control threads have been joined
[2025-07-26 20:22:02] 2025-07-27 00:21:31,848 | INFO     | all data control threads have been joined
[2025-07-26 20:22:02] 2025-07-27 00:21:31,891 | INFO     | all job control threads have been joined
[2025-07-26 20:22:02] 2025-07-27 00:21:32,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 20:22:02] 2025-07-27 00:21:32,459 | INFO     | [job] retrieve thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:32,480 | INFO     | [job] job monitor thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:32,637 | INFO     | [payload] validate_post thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:32,688 | INFO     | [payload] control thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:32,853 | INFO     | [data] control thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:32,896 | INFO     | [job] control thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:33,253 | INFO     | [payload] failed_post thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:33,306 | INFO     | [data] copytool_in thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:33,384 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:33,642 | INFO     | [data] copytool_out thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:33,656 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:33,675 | INFO     | [job] validate thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:33,925 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:34,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:22:02] 2025-07-27 00:21:35,049 | INFO     | [job] queue monitor thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:36,401 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:42,465 | INFO     | job.realtimelogging is not enabled
[2025-07-26 20:22:02] 2025-07-27 00:21:43,471 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 20:22:02] 2025-07-27 00:21:45,178 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140255849703232)>', '<ExcThread(monitor, started 140255353095936)>']
[2025-07-26 20:22:02] 2025-07-27 00:21:50,203 | INFO     | all workflow threads have been joined
[2025-07-26 20:22:02] 2025-07-27 00:21:50,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 20:22:02] 2025-07-27 00:21:50,203 | INFO     | traces error code: 0
[2025-07-26 20:22:02] 2025-07-27 00:21:50,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 20:22:02] 2025-07-27 00:22:02,436 | INFO     | PID=1238141 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 20:22:02] 2025-07-27 00:22:02,436 | INFO     | .. there are 15 such processes running
[2025-07-26 20:22:02] 2025-07-27 00:22:02,437 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 20:22:02] 2025-07-27 00:22:02,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 20:22:02] 2025-07-27 00:22:02,437 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 20:22:02] 2025-07-27 00:22:02,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 20:22:02] 2025-07-27 00:22:02,437 | INFO     | [monitor] control thread has ended
[2025-07-26 20:22:02] 2025-07-27 00:22:02,536 [wrapper] ==== pilot stdout END ====
[2025-07-26 20:22:02] 2025-07-27 00:22:02,540 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 20:22:02] 2025-07-27 00:22:02,545 [wrapper] pilotpid: 1238141
[2025-07-26 20:22:02] 2025-07-27 00:22:02,548 [wrapper] Pilot exit status: 0
[2025-07-26 20:22:02] 2025-07-27 00:22:02,563 [wrapper] pandaids: 6745351007
[2025-07-26 20:22:02] 2025-07-27 00:22:02,650 [wrapper] cleanup supervisor_pilot 1305844 1238142
[2025-07-26 20:22:02] 2025-07-27 00:22:02,654 [wrapper] Test setup, not cleaning
[2025-07-26 20:22:02] 2025-07-27 00:22:02,658 [wrapper] apfmon messages muted
[2025-07-26 20:22:02] 2025-07-27 00:22:02,661 [wrapper] ==== wrapper stdout END ====
[2025-07-26 20:22:02] 2025-07-27 00:22:02,664 [wrapper] ==== wrapper stderr END ====
[2025-07-26 20:22:02]  *** Error codes and diagnostics ***
[2025-07-26 20:22:02]     "exeErrorCode": 0,
[2025-07-26 20:22:02]     "exeErrorDiag": "",
[2025-07-26 20:22:02]     "pilotErrorCode": 0,
[2025-07-26 20:22:02]     "pilotErrorDiag": "",
[2025-07-26 20:22:02]  *** Listing of results directory ***
[2025-07-26 20:22:02] total 438280
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 13:41 pilot3.tar.gz
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 13:47 queuedata.json
[2025-07-26 20:22:02] -rwx------. 1 boincer umatlas     36292 Jul 26 13:48 runpilot2-wrapper.sh
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas       100 Jul 26 19:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 20:22:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 19:07 run_atlas
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas       105 Jul 26 19:07 job.xml
[2025-07-26 20:22:02] -rw-r--r--. 2 boincer umatlas 233241309 Jul 26 19:07 EVNT.45743347._002362.pool.root.1
[2025-07-26 20:22:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 19:07 start_atlas.sh
[2025-07-26 20:22:02] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 19:07 shared
[2025-07-26 20:22:02] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 19:07 input.tar.gz
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas         0 Jul 26 19:07 boinc_lockfile
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 19:07 pandaJob.out
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas    980125 Jul 26 19:07 agis_schedconf.cvmfs.json
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas   1593052 Jul 26 19:07 agis_ddmendpoints.agis.ALL.json
[2025-07-26 20:22:02] drwx------. 4 boincer umatlas      4096 Jul 26 19:07 pilot3
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas      6944 Jul 26 20:19 init_data.xml
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas       529 Jul 26 20:20 boinc_task_state.xml
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas 210161923 Jul 26 20:20 HITS.45743349._041920.pool.root.1
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas      1022 Jul 26 20:21 memory_monitor_summary.json
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas    317524 Jul 26 20:21 log.45743349._041920.job.log.tgz.1
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas      7764 Jul 26 20:21 heartbeat.json
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 20:22 boinc_mmap_file
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas        27 Jul 26 20:22 wrapper_checkpoint.txt
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas       823 Jul 26 20:22 pilotlog.txt
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas        95 Jul 26 20:22 pilot_heartbeat.json
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas    442358 Jul 26 20:22 log.45743349._041920.job.log.1
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas       357 Jul 26 20:22 output.list
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas       620 Jul 26 20:22 runtime_log
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas    778240 Jul 26 20:22 result.tar.gz
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 20:22 runtime_log.err
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas       651 Jul 26 20:22 mrqKDmwByz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9A1KDm1Xzonm.diag
[2025-07-26 20:22:02] -rw-r--r--. 1 boincer umatlas     21737 Jul 26 20:22 stderr.txt
[2025-07-26 20:22:02] HITS file was successfully produced:
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas 210161923 Jul 26 20:20 shared/HITS.pool.root.1
[2025-07-26 20:22:02]  *** Contents of shared directory: ***
[2025-07-26 20:22:02] total 434332
[2025-07-26 20:22:02] -rw-r--r--. 2 boincer umatlas 233241309 Jul 26 19:07 ATLAS.root_0
[2025-07-26 20:22:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 19:07 start_atlas.sh
[2025-07-26 20:22:02] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 19:07 input.tar.gz
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas 210161923 Jul 26 20:20 HITS.pool.root.1
[2025-07-26 20:22:02] -rw-------. 1 boincer umatlas    778240 Jul 26 20:22 result.tar.gz
20:22:03 (1234531): run_atlas exited; CPU time 32684.124471
20:22:03 (1234531): called boinc_finish(0)

</stderr_txt>
]]>

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