Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:12:13 (3670983): wrapper (7.7.26015): starting
22:12:13 (3670983): wrapper: running run_atlas (--nthreads 12)
[2025-07-31 22:12:13] Arguments: --nthreads 12
[2025-07-31 22:12:13] Threads: 12
[2025-07-31 22:12:13] Checking for CVMFS
[2025-07-31 22:12:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-31 22:12:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-31 22:12:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-31 22:12:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-31 22:12:17] 2.13.1.0 4803 13738 64308 148978 2 56 2812089 4096000 912 130560 0 8753986 99.987 559762 245 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-31 22:12:17] CVMFS is ok
[2025-07-31 22:12:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-31 22:12:17] Checking for apptainer binary...
[2025-07-31 22:12:17] apptainer is not installed, using version from CVMFS
[2025-07-31 22:12:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-31 22:12:18] proliant-ml350-g6
[2025-07-31 22:12:18] apptainer works
[2025-07-31 22:12:18] Set ATHENA_PROC_NUMBER=12
[2025-07-31 22:12:18] Set ATHENA_CORE_NUMBER=12
[2025-07-31 22:12:18] Starting ATLAS job with PandaID=6745351525
[2025-07-31 22:12:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-08-01 04:45:38]  *** The last 200 lines of the pilot log: ***
[2025-08-01 04:45:38] 2025-08-01 04:45:02,702 | INFO     | monitor loop #1726: job 0:6745351525 is in state 'finished'
[2025-08-01 04:45:38] 2025-08-01 04:45:02,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-08-01 04:45:38] 2025-08-01 04:45:03,822 | INFO     | CPU arch script returned: x86-64-v2
[2025-08-01 04:45:38] 2025-08-01 04:45:03,824 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3491.8174999999997
[2025-08-01 04:45:38] 2025-08-01 04:45:03,825 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6745351525/memory_monitor_summary.json (trf name=prmon)
[2025-08-01 04:45:38] 2025-08-01 04:45:03,834 | INFO     | extracted standard info from prmon json
[2025-08-01 04:45:38] 2025-08-01 04:45:03,834 | INFO     | extracted standard memory fields from prmon json
[2025-08-01 04:45:38] 2025-08-01 04:45:03,834 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-08-01 04:45:38] 2025-08-01 04:45:03,838 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-08-01 04:45:38] 2025-08-01 04:45:03,838 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-08-01 04:45:38] 2025-08-01 04:45:03,866 | INFO     | fitting pss+swap vs Time
[2025-08-01 04:45:38] 2025-08-01 04:45:03,867 | INFO     | sum of square deviations: 17285449943.21465
[2025-08-01 04:45:38] 2025-08-01 04:45:03,874 | INFO     | sum of deviations: -26086531648.85336
[2025-08-01 04:45:38] 2025-08-01 04:45:03,874 | INFO     | mean x: 1754011814.6282723
[2025-08-01 04:45:38] 2025-08-01 04:45:03,874 | INFO     | mean y: 2691780.782722513
[2025-08-01 04:45:38] 2025-08-01 04:45:03,875 | INFO     | -- intersect: 2649778484.6335845
[2025-08-01 04:45:38] 2025-08-01 04:45:03,875 | INFO     | intersect: 2649778484.6335845
[2025-08-01 04:45:38] 2025-08-01 04:45:03,875 | INFO     | chi2: 2.869504680768869
[2025-08-01 04:45:38] 2025-08-01 04:45:03,876 | INFO     | sum of square deviations: 16615582560.631397
[2025-08-01 04:45:38] 2025-08-01 04:45:03,883 | INFO     | sum of deviations: -144406010.1750502
[2025-08-01 04:45:38] 2025-08-01 04:45:03,883 | INFO     | mean x: 1754011662.1299734
[2025-08-01 04:45:38] 2025-08-01 04:45:03,883 | INFO     | mean y: 2697623.4933687
[2025-08-01 04:45:38] 2025-08-01 04:45:03,883 | INFO     | -- intersect: 17941736.963626258
[2025-08-01 04:45:38] 2025-08-01 04:45:03,883 | INFO     | intersect: 17941736.963626258
[2025-08-01 04:45:38] 2025-08-01 04:45:03,884 | INFO     | chi2: 2.1715404684928687
[2025-08-01 04:45:38] 2025-08-01 04:45:03,884 | INFO     | current chi2=2.1715404684928687 (change=24.323508407345905 %)
[2025-08-01 04:45:38] 2025-08-01 04:45:03,884 | INFO     | right removable region: 376
[2025-08-01 04:45:38] 2025-08-01 04:45:03,885 | INFO     | sum of square deviations: 16615552670.631397
[2025-08-01 04:45:38] 2025-08-01 04:45:03,896 | INFO     | sum of deviations: -107379017338.44293
[2025-08-01 04:45:38] 2025-08-01 04:45:03,896 | INFO     | mean x: 1754011967.1299734
[2025-08-01 04:45:38] 2025-08-01 04:45:03,896 | INFO     | mean y: 2710200.702917772
[2025-08-01 04:45:38] 2025-08-01 04:45:03,896 | INFO     | -- intersect: 11338118968.85006
[2025-08-01 04:45:38] 2025-08-01 04:45:03,897 | INFO     | intersect: 11338118968.85006
[2025-08-01 04:45:38] 2025-08-01 04:45:03,897 | INFO     | chi2: 0.916018617029147
[2025-08-01 04:45:38] 2025-08-01 04:45:03,897 | INFO     | current chi2=0.916018617029147 (change=68.07746566269044 %)
[2025-08-01 04:45:38] 2025-08-01 04:45:03,898 | INFO     | sum of square deviations: 15963190610.545662
[2025-08-01 04:45:38] 2025-08-01 04:45:03,901 | INFO     | sum of deviations: -89761045222.37901
[2025-08-01 04:45:38] 2025-08-01 04:45:03,901 | INFO     | mean x: 1754012119.6317205
[2025-08-01 04:45:38] 2025-08-01 04:45:03,901 | INFO     | mean y: 2706078.2016129033
[2025-08-01 04:45:38] 2025-08-01 04:45:03,901 | INFO     | -- intersect: 9865518910.04576
[2025-08-01 04:45:38] 2025-08-01 04:45:03,901 | INFO     | intersect: 9865518910.04576
[2025-08-01 04:45:38] 2025-08-01 04:45:03,910 | INFO     | chi2: 0.8748792932478158
[2025-08-01 04:45:38] 2025-08-01 04:45:03,910 | INFO     | current chi2=0.8748792932478158 (change=4.491101274202837 %)
[2025-08-01 04:45:38] 2025-08-01 04:45:03,910 | INFO     | left removable region: 20
[2025-08-01 04:45:38] 2025-08-01 04:45:03,911 | INFO     | sum of square deviations: 13990795626.255678
[2025-08-01 04:45:38] 2025-08-01 04:45:03,914 | INFO     | sum of deviations: -45247418964.73313
[2025-08-01 04:45:38] 2025-08-01 04:45:03,914 | INFO     | mean x: 1754012241.6376405
[2025-08-01 04:45:38] 2025-08-01 04:45:03,914 | INFO     | mean y: 2707675.412921348
[2025-08-01 04:45:38] 2025-08-01 04:45:03,914 | INFO     | -- intersect: 5675331941.163073
[2025-08-01 04:45:38] 2025-08-01 04:45:03,914 | INFO     | intersect: 5675331941.163073
[2025-08-01 04:45:38] 2025-08-01 04:45:03,915 | INFO     | chi2: 0.1353434540894599
[2025-08-01 04:45:38] 2025-08-01 04:45:03,915 | INFO     | -- intersect: 5675331941.163073
[2025-08-01 04:45:38] 2025-08-01 04:45:03,915 | INFO     | current memory leak: -3.23 B/s (using 356 data points, chi2=0.14)
[2025-08-01 04:45:38] 2025-08-01 04:45:03,915 | INFO     | could have reported an average CPU frequency of 3491 MHz (16 samples)
[2025-08-01 04:45:38] 2025-08-01 04:45:03,916 | INFO     | ..............................
[2025-08-01 04:45:38] 2025-08-01 04:45:03,916 | INFO     | . Timing measurements:
[2025-08-01 04:45:38] 2025-08-01 04:45:03,916 | INFO     | . get job = 0 s
[2025-08-01 04:45:38] 2025-08-01 04:45:03,916 | INFO     | . initial setup = 4 s
[2025-08-01 04:45:38] 2025-08-01 04:45:03,916 | INFO     | . payload setup = 76 s
[2025-08-01 04:45:38] 2025-08-01 04:45:03,916 | INFO     | . stage-in = 0 s
[2025-08-01 04:45:38] 2025-08-01 04:45:03,916 | INFO     | . payload execution = 23300 s
[2025-08-01 04:45:38] 2025-08-01 04:45:03,916 | INFO     | . stage-out = 2 s
[2025-08-01 04:45:38] 2025-08-01 04:45:03,916 | INFO     | . log creation = 0 s
[2025-08-01 04:45:38] 2025-08-01 04:45:03,916 | INFO     | ..............................
[2025-08-01 04:45:38] 2025-08-01 04:45:04,170 | INFO     | 
[2025-08-01 04:45:38] 2025-08-01 04:45:04,170 | INFO     | job summary report
[2025-08-01 04:45:38] 2025-08-01 04:45:04,170 | INFO     | --------------------------------------------------
[2025-08-01 04:45:38] 2025-08-01 04:45:04,170 | INFO     | PanDA job id: 6745351525
[2025-08-01 04:45:38] 2025-08-01 04:45:04,170 | INFO     | task id: 45743349
[2025-08-01 04:45:38] 2025-08-01 04:45:04,171 | INFO     | errors: (none)
[2025-08-01 04:45:38] 2025-08-01 04:45:04,171 | INFO     | status: LOG_TRANSFER = DONE 
[2025-08-01 04:45:38] 2025-08-01 04:45:04,171 | INFO     | pilot state: finished 
[2025-08-01 04:45:38] 2025-08-01 04:45:04,171 | INFO     | transexitcode: 0
[2025-08-01 04:45:38] 2025-08-01 04:45:04,171 | INFO     | exeerrorcode: 0
[2025-08-01 04:45:38] 2025-08-01 04:45:04,171 | INFO     | exeerrordiag: 
[2025-08-01 04:45:38] 2025-08-01 04:45:04,171 | INFO     | exitcode: 0
[2025-08-01 04:45:38] 2025-08-01 04:45:04,171 | INFO     | exitmsg: OK
[2025-08-01 04:45:38] 2025-08-01 04:45:04,171 | INFO     | cpuconsumptiontime: 69643 s
[2025-08-01 04:45:38] 2025-08-01 04:45:04,172 | INFO     | nevents: 400
[2025-08-01 04:45:38] 2025-08-01 04:45:04,172 | INFO     | neventsw: 0
[2025-08-01 04:45:38] 2025-08-01 04:45:04,172 | INFO     | pid: 3681075
[2025-08-01 04:45:38] 2025-08-01 04:45:04,172 | INFO     | pgrp: 3681075
[2025-08-01 04:45:38] 2025-08-01 04:45:04,172 | INFO     | corecount: 12
[2025-08-01 04:45:38] 2025-08-01 04:45:04,172 | INFO     | event service: False
[2025-08-01 04:45:38] 2025-08-01 04:45:04,172 | INFO     | sizes: {0: 2394426, 1: 2395305, 2: 2395333, 13: 2395333, 23: 2395389, 34: 2395417, 36: 2395835, 45: 2395863, 23380: 2430559, 23381: 2430558, 23384: 2439658, 23386:
[2025-08-01 04:45:38] 2025-08-01 04:45:04,172 | INFO     | --------------------------------------------------
[2025-08-01 04:45:38] 2025-08-01 04:45:04,172 | INFO     | 
[2025-08-01 04:45:38] 2025-08-01 04:45:04,173 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-08-01 04:45:38] 2025-08-01 04:45:04,274 | INFO     | queue jobs had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,274 | INFO     | queue payloads had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,275 | INFO     | queue data_in had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,275 | INFO     | queue data_out had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,275 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,275 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,275 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,276 | INFO     | queue completed_jobids has 1 job(s)
[2025-08-01 04:45:38] 2025-08-01 04:45:04,276 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,276 | INFO     | queue messages had 0 job(s) [purged]
[2025-08-01 04:45:38] 2025-08-01 04:45:04,276 | INFO     | job 6745351525 has completed (purged errors)
[2025-08-01 04:45:38] 2025-08-01 04:45:04,277 | INFO     | overall cleanup function is called
[2025-08-01 04:45:38] 2025-08-01 04:45:04,376 | INFO     | PID=3674604 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-08-01 04:45:38] 2025-08-01 04:45:04,376 | INFO     | .. there are 2 such processes running
[2025-08-01 04:45:38] 2025-08-01 04:45:05,286 | INFO     | --- collectZombieJob: --- 10, [3681075]
[2025-08-01 04:45:38] 2025-08-01 04:45:05,286 | INFO     | zombie collector waiting for pid 3681075
[2025-08-01 04:45:38] 2025-08-01 04:45:05,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-08-01 04:45:38] 2025-08-01 04:45:05,286 | INFO     | collected zombie processes
[2025-08-01 04:45:38] 2025-08-01 04:45:05,286 | INFO     | will attempt to kill all subprocesses of pid=3681075
[2025-08-01 04:45:38] 2025-08-01 04:45:05,538 | INFO     | process IDs to be killed: [3681075] (in reverse order)
[2025-08-01 04:45:38] 2025-08-01 04:45:05,638 | WARNING  | found no corresponding commands to process id(s)
[2025-08-01 04:45:38] 2025-08-01 04:45:05,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-08-01 04:45:38] 2025-08-01 04:45:05,642 | INFO     | did not find any defunct processes belonging to 3681075
[2025-08-01 04:45:38] 2025-08-01 04:45:05,648 | INFO     | did not find any defunct processes belonging to 3681075
[2025-08-01 04:45:38] 2025-08-01 04:45:05,649 | INFO     | ready for new job
[2025-08-01 04:45:38] 2025-08-01 04:45:05,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-08-01 04:45:38] 2025-08-01 04:45:05,654 | INFO     | ***************************************
[2025-08-01 04:45:38] 2025-08-01 04:45:05,655 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-08-01 04:45:38] 2025-08-01 04:45:05,655 | INFO     | ***************************************
[2025-08-01 04:45:38] 2025-08-01 04:45:05,655 | INFO     | 
[2025-08-01 04:45:38] 2025-08-01 04:45:05,678 | INFO     | architecture information:
[2025-08-01 04:45:38] 2025-08-01 04:45:05,682 | INFO     | executing command: cat /etc/os-release
[2025-08-01 04:45:38] 2025-08-01 04:45:05,750 | INFO     | cat /etc/os-release:
[2025-08-01 04:45:38] NAME="CentOS Linux"
[2025-08-01 04:45:38] VERSION="7 (Core)"
[2025-08-01 04:45:38] ID="centos"
[2025-08-01 04:45:38] ID_LIKE="rhel fedora"
[2025-08-01 04:45:38] VERSION_ID="7"
[2025-08-01 04:45:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-08-01 04:45:38] ANSI_COLOR="0;31"
[2025-08-01 04:45:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-08-01 04:45:38] HOME_URL="https://www.centos.org/"
[2025-08-01 04:45:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-08-01 04:45:38] 
[2025-08-01 04:45:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-08-01 04:45:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-08-01 04:45:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-08-01 04:45:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-08-01 04:45:38] 
[2025-08-01 04:45:38] 2025-08-01 04:45:05,750 | INFO     | ***************************************
[2025-08-01 04:45:38] 2025-08-01 04:45:06,254 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-08-01 04:45:38] 2025-08-01 04:45:06,333 | INFO     | sufficient remaining disk space (164494311424 B)
[2025-08-01 04:45:38] 2025-08-01 04:45:06,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-08-01 04:45:38] 2025-08-01 04:45:06,333 | INFO     | current server update state: UPDATING_FINAL
[2025-08-01 04:45:38] 2025-08-01 04:45:06,333 | INFO     | update_server=False
[2025-08-01 04:45:38] 2025-08-01 04:45:06,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-08-01 04:45:38] 2025-08-01 04:45:06,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-08-01 04:45:38] 2025-08-01 04:45:06,334 | INFO     | aborting loop
[2025-08-01 04:45:38] 2025-08-01 04:45:06,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-08-01 04:45:38] 2025-08-01 04:45:06,658 | INFO     | all job control threads have been joined
[2025-08-01 04:45:38] 2025-08-01 04:45:07,003 | INFO     | all data control threads have been joined
[2025-08-01 04:45:38] 2025-08-01 04:45:07,074 | INFO     | all payload control threads have been joined
[2025-08-01 04:45:38] 2025-08-01 04:45:07,338 | INFO     | [job] retrieve thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:07,338 | INFO     | [job] job monitor thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:07,474 | INFO     | [data] copytool_in thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:07,478 | INFO     | [payload] failed_post thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:07,522 | INFO     | [payload] execute_payloads thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:07,666 | INFO     | [job] control thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:08,006 | INFO     | [data] control thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:08,086 | INFO     | [job] validate thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:08,090 | INFO     | [payload] control thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:08,138 | INFO     | [job] create_data_payload thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:08,290 | INFO     | [payload] validate_post thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:08,298 | INFO     | [payload] run_realtimelog thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:08,350 | INFO     | [data] copytool_out thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:08,594 | INFO     | [payload] validate_pre thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:09,190 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-08-01 04:45:38] 2025-08-01 04:45:09,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-08-01 04:45:38] 2025-08-01 04:45:10,194 | INFO     | [job] queue monitor thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:13,810 | INFO     | [data] queue_monitor thread has finished
[2025-08-01 04:45:38] 2025-08-01 04:45:15,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140230074292032)>', '<ExcThread(monitor, started 140229776226048)>']
[2025-08-01 04:45:38] 2025-08-01 04:45:20,350 | INFO     | all workflow threads have been joined
[2025-08-01 04:45:38] 2025-08-01 04:45:20,350 | INFO     | end of generic workflow (traces error code: 0)
[2025-08-01 04:45:38] 2025-08-01 04:45:20,350 | INFO     | traces error code: 0
[2025-08-01 04:45:38] 2025-08-01 04:45:20,351 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-08-01 04:45:38] 2025-08-01 04:45:36,648 | INFO     | PID=3674604 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-08-01 04:45:38] 2025-08-01 04:45:36,648 | INFO     | .. there are 2 such processes running
[2025-08-01 04:45:38] 2025-08-01 04:45:36,658 | INFO     | found 0 job(s) in 20 queues
[2025-08-01 04:45:38] 2025-08-01 04:45:36,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-08-01 04:45:38] 2025-08-01 04:45:36,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-08-01 04:45:38] 2025-08-01 04:45:36,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-08-01 04:45:38] 2025-08-01 04:45:36,658 | INFO     | [monitor] control thread has ended
[2025-08-01 04:45:38] 2025-08-01 04:45:36,967 [wrapper] ==== pilot stdout END ====
[2025-08-01 04:45:38] 2025-08-01 04:45:37,046 [wrapper] ==== wrapper stdout RESUME ====
[2025-08-01 04:45:38] 2025-08-01 04:45:37,103 [wrapper] pilotpid: 3674604
[2025-08-01 04:45:38] 2025-08-01 04:45:37,174 [wrapper] Pilot exit status: 0
[2025-08-01 04:45:38] 2025-08-01 04:45:37,345 [wrapper] pandaids: 6745351525
[2025-08-01 04:45:38] 2025-08-01 04:45:37,486 [wrapper] cleanup supervisor_pilot 3771820 3674605
[2025-08-01 04:45:38] 2025-08-01 04:45:37,534 [wrapper] Test setup, not cleaning
[2025-08-01 04:45:38] 2025-08-01 04:45:37,586 [wrapper] apfmon messages muted
[2025-08-01 04:45:38] 2025-08-01 04:45:37,619 [wrapper] ==== wrapper stdout END ====
[2025-08-01 04:45:38] 2025-08-01 04:45:37,659 [wrapper] ==== wrapper stderr END ====
[2025-08-01 04:45:38]  *** Error codes and diagnostics ***
[2025-08-01 04:45:38]     "exeErrorCode": 0,
[2025-08-01 04:45:38]     "exeErrorDiag": "",
[2025-08-01 04:45:38]     "pilotErrorCode": 0,
[2025-08-01 04:45:38]     "pilotErrorDiag": "",
[2025-08-01 04:45:38]  *** Listing of results directory ***
[2025-08-01 04:45:38] total 355536
[2025-08-01 04:45:38] -rw-r--r-- 1 boinc boinc    530466 Jul 26 17:41 pilot3.tar.gz
[2025-08-01 04:45:38] -rwx------ 1 boinc boinc     36292 Jul 26 18:04 runpilot2-wrapper.sh
[2025-08-01 04:45:38] -rw-r--r-- 1 boinc boinc      5112 Jul 26 18:04 queuedata.json
[2025-08-01 04:45:38] -rw-rw-r-- 1 boinc boinc       100 Jul 31 22:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-08-01 04:45:38] -rwxr-xr-x 1 boinc boinc      7986 Jul 31 22:12 run_atlas
[2025-08-01 04:45:38] -rw-rw-r-- 1 boinc boinc       105 Jul 31 22:12 job.xml
[2025-08-01 04:45:38] -rw-r--r-- 2 boinc boinc     15095 Jul 31 22:12 start_atlas.sh
[2025-08-01 04:45:38] drwxrwx--x 2 boinc boinc      4096 Jul 31 22:12 shared
[2025-08-01 04:45:38] -rw-r--r-- 2 boinc boinc    542896 Jul 31 22:12 input.tar.gz
[2025-08-01 04:45:38] -rw-rw-r-- 1 boinc boinc      9293 Jul 31 22:12 init_data.xml
[2025-08-01 04:45:38] -rw-r--r-- 2 boinc boinc 144572079 Jul 31 22:12 EVNT.45743347._002372.pool.root.1
[2025-08-01 04:45:38] -rw-rw-r-- 1 boinc boinc         0 Jul 31 22:12 boinc_lockfile
[2025-08-01 04:45:38] -rw-rw-r-- 1 boinc boinc      2563 Jul 31 22:12 pandaJob.out
[2025-08-01 04:45:38] -rw------- 1 boinc boinc    977332 Jul 31 22:13 agis_schedconf.cvmfs.json
[2025-08-01 04:45:38] drwx------ 4 boinc boinc      4096 Jul 31 22:13 pilot3
[2025-08-01 04:45:38] -rw------- 1 boinc boinc 210212907 Aug  1 04:43 HITS.45743349._042112.pool.root.1
[2025-08-01 04:45:38] -rw-rw-r-- 1 boinc boinc       530 Aug  1 04:43 boinc_task_state.xml
[2025-08-01 04:45:38] -rw------- 1 boinc boinc      1018 Aug  1 04:44 memory_monitor_summary.json
[2025-08-01 04:45:38] -rw------- 1 boinc boinc   1592206 Aug  1 04:44 agis_ddmendpoints.agis.ALL.json
[2025-08-01 04:45:38] -rw------- 1 boinc boinc    533673 Aug  1 04:44 log.45743349._042112.job.log.tgz.1
[2025-08-01 04:45:38] -rw------- 1 boinc boinc      7782 Aug  1 04:45 heartbeat.json
[2025-08-01 04:45:38] -rw-rw-r-- 1 boinc boinc      8192 Aug  1 04:45 boinc_mmap_file
[2025-08-01 04:45:38] -rw-rw-r-- 1 boinc boinc        28 Aug  1 04:45 wrapper_checkpoint.txt
[2025-08-01 04:45:38] -rw------- 1 boinc boinc        96 Aug  1 04:45 pilot_heartbeat.json
[2025-08-01 04:45:38] -rw------- 1 boinc boinc       822 Aug  1 04:45 pilotlog.txt
[2025-08-01 04:45:38] -rw------- 1 boinc boinc   2170857 Aug  1 04:45 log.45743349._042112.job.log.1
[2025-08-01 04:45:38] -rw------- 1 boinc boinc       357 Aug  1 04:45 output.list
[2025-08-01 04:45:38] -rw-rw-r-- 1 boinc boinc       620 Aug  1 04:45 runtime_log
[2025-08-01 04:45:38] -rw------- 1 boinc boinc   2723840 Aug  1 04:45 result.tar.gz
[2025-08-01 04:45:38] -rw-rw-r-- 1 boinc boinc      9010 Aug  1 04:45 runtime_log.err
[2025-08-01 04:45:38] -rw------- 1 boinc boinc       665 Aug  1 04:45 Jd3MDmxQyz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmOC1KDmtdxFLm.diag
[2025-08-01 04:45:38] -rw-rw-r-- 1 boinc boinc     21144 Aug  1 04:45 stderr.txt
[2025-08-01 04:45:38] HITS file was successfully produced:
[2025-08-01 04:45:38] -rw------- 1 boinc boinc 210212907 Aug  1 04:43 shared/HITS.pool.root.1
[2025-08-01 04:45:38]  *** Contents of shared directory: ***
[2025-08-01 04:45:38] total 349688
[2025-08-01 04:45:38] -rw-r--r-- 2 boinc boinc     15095 Jul 31 22:12 start_atlas.sh
[2025-08-01 04:45:38] -rw-r--r-- 2 boinc boinc    542896 Jul 31 22:12 input.tar.gz
[2025-08-01 04:45:38] -rw-r--r-- 2 boinc boinc 144572079 Jul 31 22:12 ATLAS.root_0
[2025-08-01 04:45:38] -rw------- 1 boinc boinc 210212907 Aug  1 04:43 HITS.pool.root.1
[2025-08-01 04:45:38] -rw------- 1 boinc boinc   2723840 Aug  1 04:45 result.tar.gz
04:45:40 (3670983): run_atlas exited; CPU time 69840.513745
04:45:40 (3670983): called boinc_finish(0)

</stderr_txt>
]]>

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