Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:56:39 (3664790): wrapper (7.7.26015): starting
18:56:39 (3664790): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 18:56:39] Arguments: --nthreads 12
[2025-07-26 18:56:39] Threads: 12
[2025-07-26 18:56:39] Checking for CVMFS
[2025-07-26 18:56:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 18:56:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 18:56:39] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 18:56:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 18:56:39] 2.13.1.0 130251 5885 131276 148792 0 65 36667284 40960000 5388 16776704 0 6119974 99.734 7601155 35967 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 18:56:39] CVMFS is ok
[2025-07-26 18:56:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 18:56:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 18:56:39] Further information can be found at the LHC@home message board.
[2025-07-26 18:56:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 18:56:39] Checking for apptainer binary...
[2025-07-26 18:56:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 18:56:39] Running /usr/bin/apptainer --version
[2025-07-26 18:56:39] apptainer version 1.4.1-1.el9
[2025-07-26 18:56:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 18:56:39] c-210-8.aglt2.org
[2025-07-26 18:56:39] apptainer works
[2025-07-26 18:56:39] Set ATHENA_PROC_NUMBER=12
[2025-07-26 18:56:39] Set ATHENA_CORE_NUMBER=12
[2025-07-26 18:56:39] Starting ATLAS job with PandaID=6745351027
[2025-07-26 18:56:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 20:33:56]  *** The last 200 lines of the pilot log: ***
[2025-07-26 20:33:56]  mtime=0
[2025-07-26 20:33:56]  protocol_id=None
[2025-07-26 20:33:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 20:33:56]  replicas=None
[2025-07-26 20:33:56]  scope=mc23_13p6TeV
[2025-07-26 20:33:56]  status=None
[2025-07-26 20:33:56]  status_code=0
[2025-07-26 20:33:56]  storage_token=
[2025-07-26 20:33:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745351027/log.45743349._041940.job.log.tgz.1
[2025-07-26 20:33:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/b1/log.45743349._041940.job.log.tgz.1
[2025-07-26 20:33:56]  workdir=None
[2025-07-26 20:33:56] ]
[2025-07-26 20:33:56] 2025-07-27 00:33:13,536 | INFO     | transferring file log.45743349._041940.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745351027/log.45743349._041940.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 20:33:56] 2025-07-27 00:33:13,537 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745351027/log.45743349._041940.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._041940.job
[2025-07-26 20:33:56] 2025-07-27 00:33:13,556 | INFO     | adding to output.list: log.45743349._041940.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/40/b1/log.45743349._041940.job.log.tg
[2025-07-26 20:33:56] 2025-07-27 00:33:13,557 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 20:33:56] 2025-07-27 00:33:13,557 | INFO     | summary of transferred files:
[2025-07-26 20:33:56] 2025-07-27 00:33:13,557 | INFO     |  -- lfn=log.45743349._041940.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 20:33:56] 2025-07-27 00:33:13,557 | INFO     | stage-out finished correctly
[2025-07-26 20:33:56] 2025-07-27 00:33:14,874 | INFO     | monitor loop #428: job 0:6745351027 is in state 'finished'
[2025-07-26 20:33:56] 2025-07-27 00:33:14,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:33:56] 2025-07-27 00:33:16,548 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 20:33:56] 2025-07-27 00:33:17,377 | INFO     | monitor loop #429: job 0:6745351027 is in state 'finished'
[2025-07-26 20:33:56] 2025-07-27 00:33:17,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:33:56] 2025-07-27 00:33:18,777 | INFO     | job 6745351027 has state=finished
[2025-07-26 20:33:56] 2025-07-27 00:33:18,778 | INFO     | preparing for final server update for job 6745351027 in state='finished'
[2025-07-26 20:33:56] 2025-07-27 00:33:18,778 | INFO     | this job has now completed (state=finished)
[2025-07-26 20:33:56] 2025-07-27 00:33:18,778 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 20:33:56] 2025-07-27 00:33:18,778 | INFO     | log transfer has been attempted: DONE
[2025-07-26 20:33:56] 2025-07-27 00:33:18,779 | INFO     | job 6745351027 has finished - writing final server update
[2025-07-26 20:33:56] 2025-07-27 00:33:18,779 | INFO     | total number of processed events: 400 (read)
[2025-07-26 20:33:56] 2025-07-27 00:33:18,780 | INFO     | executing command: lscpu
[2025-07-26 20:33:56] 2025-07-27 00:33:18,827 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 20:33:56] 2025-07-27 00:33:19,880 | INFO     | monitor loop #430: job 0:6745351027 is in state 'finished'
[2025-07-26 20:33:56] 2025-07-27 00:33:19,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:33:56] 2025-07-27 00:33:22,383 | INFO     | monitor loop #431: job 0:6745351027 is in state 'finished'
[2025-07-26 20:33:56] 2025-07-27 00:33:22,384 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:33:56] 2025-07-27 00:33:23,306 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 20:33:56] 2025-07-27 00:33:23,314 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2511.569729166667
[2025-07-26 20:33:56] 2025-07-27 00:33:23,322 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745351027/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 20:33:56] 2025-07-27 00:33:23,323 | INFO     | extracted standard info from prmon json
[2025-07-26 20:33:56] 2025-07-27 00:33:23,323 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 20:33:56] 2025-07-27 00:33:23,323 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 20:33:56] 2025-07-27 00:33:23,323 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 20:33:56] 2025-07-27 00:33:23,323 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:33:56] 2025-07-27 00:33:23,326 | INFO     | fitting pss+swap vs Time
[2025-07-26 20:33:56] 2025-07-27 00:33:23,326 | INFO     | sum of square deviations: 211285822.0
[2025-07-26 20:33:56] 2025-07-27 00:33:23,327 | INFO     | sum of deviations: -11897718251.5
[2025-07-26 20:33:56] 2025-07-27 00:33:23,327 | INFO     | mean x: 1753573596.5
[2025-07-26 20:33:56] 2025-07-27 00:33:23,327 | INFO     | mean y: 2823867.534090909
[2025-07-26 20:33:56] 2025-07-27 00:33:23,327 | INFO     | -- intersect: 98748325988.47879
[2025-07-26 20:33:56] 2025-07-27 00:33:23,327 | INFO     | intersect: 98748325988.47879
[2025-07-26 20:33:56] 2025-07-27 00:33:23,327 | INFO     | chi2: 0.1316356829306548
[2025-07-26 20:33:56] 2025-07-27 00:33:23,327 | INFO     | -- intersect: 98748325988.47879
[2025-07-26 20:33:56] 2025-07-27 00:33:23,327 | INFO     | current memory leak: -56.31 B/s (using 88 data points, chi2=0.13)
[2025-07-26 20:33:56] 2025-07-27 00:33:23,328 | INFO     | could have reported an average CPU frequency of 2498 MHz (7 samples)
[2025-07-26 20:33:56] 2025-07-27 00:33:23,328 | INFO     | ..............................
[2025-07-26 20:33:56] 2025-07-27 00:33:23,328 | INFO     | . Timing measurements:
[2025-07-26 20:33:56] 2025-07-27 00:33:23,328 | INFO     | . get job = 0 s
[2025-07-26 20:33:56] 2025-07-27 00:33:23,328 | INFO     | . initial setup = 2 s
[2025-07-26 20:33:56] 2025-07-27 00:33:23,328 | INFO     | . payload setup = 7 s
[2025-07-26 20:33:56] 2025-07-27 00:33:23,329 | INFO     | . stage-in = 0 s
[2025-07-26 20:33:56] 2025-07-27 00:33:23,329 | INFO     | . payload execution = 5754 s
[2025-07-26 20:33:56] 2025-07-27 00:33:23,329 | INFO     | . stage-out = 1 s
[2025-07-26 20:33:56] 2025-07-27 00:33:23,329 | INFO     | . log creation = 0 s
[2025-07-26 20:33:56] 2025-07-27 00:33:23,329 | INFO     | ..............................
[2025-07-26 20:33:56] 2025-07-27 00:33:23,467 | INFO     | 
[2025-07-26 20:33:56] 2025-07-27 00:33:23,468 | INFO     | job summary report
[2025-07-26 20:33:56] 2025-07-27 00:33:23,468 | INFO     | --------------------------------------------------
[2025-07-26 20:33:56] 2025-07-27 00:33:23,468 | INFO     | PanDA job id: 6745351027
[2025-07-26 20:33:56] 2025-07-27 00:33:23,468 | INFO     | task id: 45743349
[2025-07-26 20:33:56] 2025-07-27 00:33:23,468 | INFO     | errors: (none)
[2025-07-26 20:33:56] 2025-07-27 00:33:23,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 20:33:56] 2025-07-27 00:33:23,469 | INFO     | pilot state: finished 
[2025-07-26 20:33:56] 2025-07-27 00:33:23,469 | INFO     | transexitcode: 0
[2025-07-26 20:33:56] 2025-07-27 00:33:23,469 | INFO     | exeerrorcode: 0
[2025-07-26 20:33:56] 2025-07-27 00:33:23,469 | INFO     | exeerrordiag: 
[2025-07-26 20:33:56] 2025-07-27 00:33:23,469 | INFO     | exitcode: 0
[2025-07-26 20:33:56] 2025-07-27 00:33:23,469 | INFO     | exitmsg: OK
[2025-07-26 20:33:56] 2025-07-27 00:33:23,469 | INFO     | cpuconsumptiontime: 63759 s
[2025-07-26 20:33:56] 2025-07-27 00:33:23,470 | INFO     | nevents: 400
[2025-07-26 20:33:56] 2025-07-27 00:33:23,470 | INFO     | neventsw: 0
[2025-07-26 20:33:56] 2025-07-27 00:33:23,470 | INFO     | pid: 3676050
[2025-07-26 20:33:56] 2025-07-27 00:33:23,470 | INFO     | pgrp: 3676050
[2025-07-26 20:33:56] 2025-07-27 00:33:23,470 | INFO     | corecount: 12
[2025-07-26 20:33:56] 2025-07-27 00:33:23,470 | INFO     | event service: False
[2025-07-26 20:33:56] 2025-07-27 00:33:23,471 | INFO     | sizes: {0: 2397361, 1: 2397503, 5: 2397765, 11: 2397821, 5765: 2424408, 5766: 2433406, 5769: 2433590, 5776: 2433784}
[2025-07-26 20:33:56] 2025-07-27 00:33:23,471 | INFO     | --------------------------------------------------
[2025-07-26 20:33:56] 2025-07-27 00:33:23,471 | INFO     | 
[2025-07-26 20:33:56] 2025-07-27 00:33:23,471 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 20:33:56] 2025-07-27 00:33:23,491 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,492 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,492 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,492 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,492 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,492 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,492 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,493 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,493 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,493 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,493 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,493 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,493 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,494 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 20:33:56] 2025-07-27 00:33:23,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,494 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 20:33:56] 2025-07-27 00:33:23,495 | INFO     | job 6745351027 has completed (purged errors)
[2025-07-26 20:33:56] 2025-07-27 00:33:23,495 | INFO     | overall cleanup function is called
[2025-07-26 20:33:56] 2025-07-27 00:33:24,503 | INFO     | --- collectZombieJob: --- 10, [3676050]
[2025-07-26 20:33:56] 2025-07-27 00:33:24,503 | INFO     | zombie collector waiting for pid 3676050
[2025-07-26 20:33:56] 2025-07-27 00:33:24,503 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 20:33:56] 2025-07-27 00:33:24,504 | INFO     | collected zombie processes
[2025-07-26 20:33:56] 2025-07-27 00:33:24,504 | INFO     | will attempt to kill all subprocesses of pid=3676050
[2025-07-26 20:33:56] 2025-07-27 00:33:24,778 | INFO     | process IDs to be killed: [3676050] (in reverse order)
[2025-07-26 20:33:56] 2025-07-27 00:33:24,866 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 20:33:56] 2025-07-27 00:33:24,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 20:33:56] 2025-07-27 00:33:24,877 | INFO     | did not find any defunct processes belonging to 3676050
[2025-07-26 20:33:56] 2025-07-27 00:33:24,886 | INFO     | did not find any defunct processes belonging to 3676050
[2025-07-26 20:33:56] 2025-07-27 00:33:24,887 | INFO     | ready for new job
[2025-07-26 20:33:56] 2025-07-27 00:33:24,887 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 20:33:56] 2025-07-27 00:33:24,889 | INFO     | ***************************************
[2025-07-26 20:33:56] 2025-07-27 00:33:24,890 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 20:33:56] 2025-07-27 00:33:24,890 | INFO     | ***************************************
[2025-07-26 20:33:56] 2025-07-27 00:33:24,891 | INFO     | 
[2025-07-26 20:33:56] 2025-07-27 00:33:24,894 | INFO     | architecture information:
[2025-07-26 20:33:56] 2025-07-27 00:33:24,895 | INFO     | executing command: cat /etc/os-release
[2025-07-26 20:33:56] 2025-07-27 00:33:24,928 | INFO     | cat /etc/os-release:
[2025-07-26 20:33:56] NAME="CentOS Linux"
[2025-07-26 20:33:56] VERSION="7 (Core)"
[2025-07-26 20:33:56] ID="centos"
[2025-07-26 20:33:56] ID_LIKE="rhel fedora"
[2025-07-26 20:33:56] VERSION_ID="7"
[2025-07-26 20:33:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 20:33:56] ANSI_COLOR="0;31"
[2025-07-26 20:33:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 20:33:56] HOME_URL="https://www.centos.org/"
[2025-07-26 20:33:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 20:33:56] 
[2025-07-26 20:33:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 20:33:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 20:33:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 20:33:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 20:33:56] 
[2025-07-26 20:33:56] 2025-07-27 00:33:24,928 | INFO     | ***************************************
[2025-07-26 20:33:56] 2025-07-27 00:33:25,430 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 20:33:56] 2025-07-27 00:33:25,449 | INFO     | sufficient remaining disk space (64524124160 B)
[2025-07-26 20:33:56] 2025-07-27 00:33:25,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 20:33:56] 2025-07-27 00:33:25,451 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 20:33:56] 2025-07-27 00:33:25,451 | INFO     | update_server=False
[2025-07-26 20:33:56] 2025-07-27 00:33:25,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 20:33:56] 2025-07-27 00:33:25,698 | INFO     | all payload control threads have been joined
[2025-07-26 20:33:56] 2025-07-27 00:33:25,896 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:33:56] 2025-07-27 00:33:25,897 | INFO     | aborting loop
[2025-07-26 20:33:56] 2025-07-27 00:33:26,161 | INFO     | all data control threads have been joined
[2025-07-26 20:33:56] 2025-07-27 00:33:26,456 | INFO     | [job] retrieve thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:26,459 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:26,661 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 20:33:56] 2025-07-27 00:33:26,703 | INFO     | [payload] control thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:26,901 | INFO     | [job] job monitor thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:27,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:27,064 | INFO     | all job control threads have been joined
[2025-07-26 20:33:56] 2025-07-27 00:33:27,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 20:33:56] 2025-07-27 00:33:27,166 | INFO     | [data] control thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:27,338 | INFO     | [payload] failed_post thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:27,479 | INFO     | [job] validate thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:27,741 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:27,896 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:27,919 | INFO     | [data] copytool_in thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:27,965 | INFO     | [payload] validate_post thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:28,069 | INFO     | [job] control thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:28,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:33:56] 2025-07-27 00:33:28,666 | INFO     | [data] copytool_out thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:29,432 | INFO     | [job] queue monitor thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:31,153 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 20:33:56] 2025-07-27 00:33:32,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088220948288)>', '<ExcThread(monitor, started 140087731939072)>']
[2025-07-26 20:33:56] 2025-07-27 00:33:37,668 | INFO     | all workflow threads have been joined
[2025-07-26 20:33:56] 2025-07-27 00:33:37,669 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 20:33:56] 2025-07-27 00:33:37,669 | INFO     | traces error code: 0
[2025-07-26 20:33:56] 2025-07-27 00:33:37,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 20:33:56] 2025-07-27 00:33:55,909 | INFO     | PID=3668916 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 20:33:56] 2025-07-27 00:33:55,910 | INFO     | .. there are 7 such processes running
[2025-07-26 20:33:56] 2025-07-27 00:33:55,911 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 20:33:56] 2025-07-27 00:33:55,911 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 20:33:56] 2025-07-27 00:33:55,911 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 20:33:56] 2025-07-27 00:33:55,911 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 20:33:56] 2025-07-27 00:33:55,912 | INFO     | [monitor] control thread has ended
[2025-07-26 20:33:56] 2025-07-27 00:33:56,041 [wrapper] ==== pilot stdout END ====
[2025-07-26 20:33:56] 2025-07-27 00:33:56,044 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 20:33:56] 2025-07-27 00:33:56,046 [wrapper] pilotpid: 3668916
[2025-07-26 20:33:56] 2025-07-27 00:33:56,049 [wrapper] Pilot exit status: 0
[2025-07-26 20:33:56] 2025-07-27 00:33:56,059 [wrapper] pandaids: 6745351027
[2025-07-26 20:33:56] 2025-07-27 00:33:56,102 [wrapper] cleanup supervisor_pilot 3785699 3668917
[2025-07-26 20:33:56] 2025-07-27 00:33:56,106 [wrapper] Test setup, not cleaning
[2025-07-26 20:33:56] 2025-07-27 00:33:56,110 [wrapper] apfmon messages muted
[2025-07-26 20:33:56] 2025-07-27 00:33:56,113 [wrapper] ==== wrapper stdout END ====
[2025-07-26 20:33:56] 2025-07-27 00:33:56,116 [wrapper] ==== wrapper stderr END ====
[2025-07-26 20:33:56]  *** Error codes and diagnostics ***
[2025-07-26 20:33:56]     "exeErrorCode": 0,
[2025-07-26 20:33:56]     "exeErrorDiag": "",
[2025-07-26 20:33:56]     "pilotErrorCode": 0,
[2025-07-26 20:33:56]     "pilotErrorDiag": "",
[2025-07-26 20:33:56]  *** Listing of results directory ***
[2025-07-26 20:33:56] total 442208
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 13:41 pilot3.tar.gz
[2025-07-26 20:33:56] -rwx------. 1 boincer umatlas     36292 Jul 26 13:51 runpilot2-wrapper.sh
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 13:51 queuedata.json
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas       100 Jul 26 18:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 20:33:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 18:56 run_atlas
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas       105 Jul 26 18:56 job.xml
[2025-07-26 20:33:56] -rw-r--r--. 2 boincer umatlas 232040943 Jul 26 18:56 EVNT.45743347._002363.pool.root.1
[2025-07-26 20:33:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 18:56 start_atlas.sh
[2025-07-26 20:33:56] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 18:56 shared
[2025-07-26 20:33:56] -rw-r--r--. 2 boincer umatlas    542901 Jul 26 18:56 input.tar.gz
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas         0 Jul 26 18:56 boinc_lockfile
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 18:56 pandaJob.out
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas    980125 Jul 26 18:56 agis_schedconf.cvmfs.json
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas   1593052 Jul 26 18:56 agis_ddmendpoints.agis.ALL.json
[2025-07-26 20:33:56] drwx------. 4 boincer umatlas      4096 Jul 26 18:56 pilot3
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas      6610 Jul 26 20:29 init_data.xml
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas 215019240 Jul 26 20:32 HITS.45743349._041940.pool.root.1
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas       530 Jul 26 20:32 boinc_task_state.xml
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas      1036 Jul 26 20:33 memory_monitor_summary.json
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas    383694 Jul 26 20:33 log.45743349._041940.job.log.tgz.1
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas      7816 Jul 26 20:33 heartbeat.json
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas        27 Jul 26 20:33 wrapper_checkpoint.txt
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas        95 Jul 26 20:33 pilot_heartbeat.json
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas       822 Jul 26 20:33 pilotlog.txt
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 20:33 boinc_mmap_file
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas    561332 Jul 26 20:33 log.45743349._041940.job.log.1
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas       357 Jul 26 20:33 output.list
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas       620 Jul 26 20:33 runtime_log
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas    962560 Jul 26 20:33 result.tar.gz
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas      8657 Jul 26 20:33 runtime_log.err
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas       653 Jul 26 20:33 pVoMDmsEyz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpB1KDmRrfa3m.diag
[2025-07-26 20:33:56] -rw-r--r--. 1 boincer umatlas     21764 Jul 26 20:33 stderr.txt
[2025-07-26 20:33:56] HITS file was successfully produced:
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas 215019240 Jul 26 20:32 shared/HITS.pool.root.1
[2025-07-26 20:33:56]  *** Contents of shared directory: ***
[2025-07-26 20:33:56] total 438076
[2025-07-26 20:33:56] -rw-r--r--. 2 boincer umatlas 232040943 Jul 26 18:56 ATLAS.root_0
[2025-07-26 20:33:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 18:56 start_atlas.sh
[2025-07-26 20:33:56] -rw-r--r--. 2 boincer umatlas    542901 Jul 26 18:56 input.tar.gz
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas 215019240 Jul 26 20:32 HITS.pool.root.1
[2025-07-26 20:33:56] -rw-------. 1 boincer umatlas    962560 Jul 26 20:33 result.tar.gz
20:33:57 (3664790): run_atlas exited; CPU time 63889.282838
20:33:57 (3664790): called boinc_finish(0)

</stderr_txt>
]]>

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