Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:52:51 (3906910): wrapper (7.7.26015): starting
18:52:51 (3906910): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 18:52:51] Arguments: --nthreads 8
[2025-07-26 18:52:51] Threads: 8
[2025-07-26 18:52:51] Checking for CVMFS
[2025-07-26 18:52:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 18:52:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 18:52:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 18:52:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 18:52:52] 2.12.6.0 83837 26452 298912 148792 0 497 21694892 32935936 19397 16776704 1 225948594 99.535 292036799 19469 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 18:52:52] CVMFS is ok
[2025-07-26 18:52:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 18:52:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 18:52:52] Further information can be found at the LHC@home message board.
[2025-07-26 18:52:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 18:52:52] Checking for apptainer binary...
[2025-07-26 18:52:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 18:52:52] Running /usr/bin/apptainer --version
[2025-07-26 18:52:52] apptainer version 1.4.1-1.el9
[2025-07-26 18:52:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 18:52:52] c7-2-10.aglt2.org
[2025-07-26 18:52:52] apptainer works
[2025-07-26 18:52:53] Set ATHENA_PROC_NUMBER=8
[2025-07-26 18:52:53] Set ATHENA_CORE_NUMBER=8
[2025-07-26 18:52:53] Starting ATLAS job with PandaID=6745350739
[2025-07-26 18:52:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 20:29:57]  *** The last 200 lines of the pilot log: ***
[2025-07-26 20:29:57]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745350739/log.45743349._041657.job.log.tgz.1
[2025-07-26 20:29:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/55/log.45743349._041657.job.log.tgz.1
[2025-07-26 20:29:57]  workdir=None
[2025-07-26 20:29:57] ]
[2025-07-26 20:29:57] 2025-07-27 00:28:50,072 | INFO     | transferring file log.45743349._041657.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745350739/log.45743349._041657.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 20:29:57] 2025-07-27 00:28:50,072 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745350739/log.45743349._041657.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._041657.job
[2025-07-26 20:29:57] 2025-07-27 00:28:50,094 | INFO     | adding to output.list: log.45743349._041657.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/55/log.45743349._041657.job.log.tg
[2025-07-26 20:29:57] 2025-07-27 00:28:50,095 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 20:29:57] 2025-07-27 00:28:50,095 | INFO     | summary of transferred files:
[2025-07-26 20:29:57] 2025-07-27 00:28:50,095 | INFO     |  -- lfn=log.45743349._041657.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 20:29:57] 2025-07-27 00:28:50,096 | INFO     | stage-out finished correctly
[2025-07-26 20:29:57] 2025-07-27 00:28:51,482 | INFO     | monitor loop #387: job 0:6745350739 is in state 'finished'
[2025-07-26 20:29:57] 2025-07-27 00:28:51,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:29:57] 2025-07-27 00:28:53,561 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 20:29:57] 2025-07-27 00:28:53,987 | INFO     | job 6745350739 has state=finished
[2025-07-26 20:29:57] 2025-07-27 00:28:53,987 | INFO     | preparing for final server update for job 6745350739 in state='finished'
[2025-07-26 20:29:57] 2025-07-27 00:28:53,992 | INFO     | monitor loop #388: job 0:6745350739 is in state 'finished'
[2025-07-26 20:29:57] 2025-07-27 00:28:53,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:29:57] 2025-07-27 00:28:54,081 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-26 20:29:57] 2025-07-27 00:28:54,081 | INFO     | this job has now completed (state=finished)
[2025-07-26 20:29:57] 2025-07-27 00:28:54,081 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 20:29:57] 2025-07-27 00:28:54,081 | INFO     | log transfer has been attempted: DONE
[2025-07-26 20:29:57] 2025-07-27 00:28:54,082 | INFO     | job 6745350739 has finished - writing final server update
[2025-07-26 20:29:57] 2025-07-27 00:28:54,082 | INFO     | total number of processed events: 400 (read)
[2025-07-26 20:29:57] 2025-07-27 00:28:54,082 | INFO     | executing command: lscpu
[2025-07-26 20:29:57] 2025-07-27 00:28:54,174 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 20:29:57] 2025-07-27 00:28:56,499 | INFO     | monitor loop #389: job 0:6745350739 is in state 'finished'
[2025-07-26 20:29:57] 2025-07-27 00:28:56,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:29:57] 2025-07-27 00:28:59,003 | INFO     | monitor loop #390: job 0:6745350739 is in state 'finished'
[2025-07-26 20:29:57] 2025-07-27 00:28:59,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:29:57] 2025-07-27 00:29:01,508 | INFO     | monitor loop #391: job 0:6745350739 is in state 'finished'
[2025-07-26 20:29:57] 2025-07-27 00:29:01,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:29:57] 2025-07-27 00:29:03,320 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 20:29:57] 2025-07-27 00:29:03,362 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3130.1179583333346
[2025-07-26 20:29:57] 2025-07-27 00:29:03,402 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745350739/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 20:29:57] 2025-07-27 00:29:03,403 | INFO     | extracted standard info from prmon json
[2025-07-26 20:29:57] 2025-07-27 00:29:03,403 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 20:29:57] 2025-07-27 00:29:03,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 20:29:57] 2025-07-27 00:29:03,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 20:29:57] 2025-07-27 00:29:03,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:29:57] 2025-07-27 00:29:03,405 | INFO     | fitting pss+swap vs Time
[2025-07-26 20:29:57] 2025-07-27 00:29:03,405 | INFO     | sum of square deviations: 197206505.45348847
[2025-07-26 20:29:57] 2025-07-27 00:29:03,406 | INFO     | sum of deviations: -9860641018.44186
[2025-07-26 20:29:57] 2025-07-27 00:29:03,406 | INFO     | mean x: 1753573354.5232558
[2025-07-26 20:29:57] 2025-07-27 00:29:03,406 | INFO     | mean y: 2245214.7209302327
[2025-07-26 20:29:57] 2025-07-27 00:29:03,406 | INFO     | -- intersect: 87683720573.23494
[2025-07-26 20:29:57] 2025-07-27 00:29:03,406 | INFO     | intersect: 87683720573.23494
[2025-07-26 20:29:57] 2025-07-27 00:29:03,407 | INFO     | chi2: 0.21019453056369167
[2025-07-26 20:29:57] 2025-07-27 00:29:03,407 | INFO     | -- intersect: 87683720573.23494
[2025-07-26 20:29:57] 2025-07-27 00:29:03,407 | INFO     | current memory leak: -50.00 B/s (using 86 data points, chi2=0.21)
[2025-07-26 20:29:57] 2025-07-27 00:29:03,407 | INFO     | could have reported an average CPU frequency of 3154 MHz (7 samples)
[2025-07-26 20:29:57] 2025-07-27 00:29:03,408 | INFO     | ..............................
[2025-07-26 20:29:57] 2025-07-27 00:29:03,408 | INFO     | . Timing measurements:
[2025-07-26 20:29:57] 2025-07-27 00:29:03,408 | INFO     | . get job = 0 s
[2025-07-26 20:29:57] 2025-07-27 00:29:03,408 | INFO     | . initial setup = 3 s
[2025-07-26 20:29:57] 2025-07-27 00:29:03,408 | INFO     | . payload setup = 16 s
[2025-07-26 20:29:57] 2025-07-27 00:29:03,408 | INFO     | . stage-in = 0 s
[2025-07-26 20:29:57] 2025-07-27 00:29:03,408 | INFO     | . payload execution = 5680 s
[2025-07-26 20:29:57] 2025-07-27 00:29:03,408 | INFO     | . stage-out = 0 s
[2025-07-26 20:29:57] 2025-07-27 00:29:03,408 | INFO     | . log creation = 0 s
[2025-07-26 20:29:57] 2025-07-27 00:29:03,409 | INFO     | ..............................
[2025-07-26 20:29:57] 2025-07-27 00:29:03,567 | INFO     | 
[2025-07-26 20:29:57] 2025-07-27 00:29:03,567 | INFO     | job summary report
[2025-07-26 20:29:57] 2025-07-27 00:29:03,568 | INFO     | --------------------------------------------------
[2025-07-26 20:29:57] 2025-07-27 00:29:03,568 | INFO     | PanDA job id: 6745350739
[2025-07-26 20:29:57] 2025-07-27 00:29:03,568 | INFO     | task id: 45743349
[2025-07-26 20:29:57] 2025-07-27 00:29:03,568 | INFO     | errors: (none)
[2025-07-26 20:29:57] 2025-07-27 00:29:03,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 20:29:57] 2025-07-27 00:29:03,568 | INFO     | pilot state: finished 
[2025-07-26 20:29:57] 2025-07-27 00:29:03,568 | INFO     | transexitcode: 0
[2025-07-26 20:29:57] 2025-07-27 00:29:03,568 | INFO     | exeerrorcode: 0
[2025-07-26 20:29:57] 2025-07-27 00:29:03,568 | INFO     | exeerrordiag: 
[2025-07-26 20:29:57] 2025-07-27 00:29:03,569 | INFO     | exitcode: 0
[2025-07-26 20:29:57] 2025-07-27 00:29:03,569 | INFO     | exitmsg: OK
[2025-07-26 20:29:57] 2025-07-27 00:29:03,569 | INFO     | cpuconsumptiontime: 37869 s
[2025-07-26 20:29:57] 2025-07-27 00:29:03,569 | INFO     | nevents: 400
[2025-07-26 20:29:57] 2025-07-27 00:29:03,569 | INFO     | neventsw: 0
[2025-07-26 20:29:57] 2025-07-27 00:29:03,569 | INFO     | pid: 3947179
[2025-07-26 20:29:57] 2025-07-27 00:29:03,569 | INFO     | pgrp: 3947179
[2025-07-26 20:29:57] 2025-07-27 00:29:03,569 | INFO     | corecount: 8
[2025-07-26 20:29:57] 2025-07-27 00:29:03,569 | INFO     | event service: False
[2025-07-26 20:29:57] 2025-07-27 00:29:03,569 | INFO     | sizes: {0: 2396647, 1: 2397503, 12: 2397793, 22: 2397793, 5701: 2424445, 5703: 2433443, 5707: 2433627, 5717: 2433821}
[2025-07-26 20:29:57] 2025-07-27 00:29:03,569 | INFO     | --------------------------------------------------
[2025-07-26 20:29:57] 2025-07-27 00:29:03,569 | INFO     | 
[2025-07-26 20:29:57] 2025-07-27 00:29:03,570 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 20:29:57] 2025-07-27 00:29:03,697 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,697 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,697 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,697 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 20:29:57] 2025-07-27 00:29:03,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,698 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 20:29:57] 2025-07-27 00:29:03,698 | INFO     | job 6745350739 has completed (purged errors)
[2025-07-26 20:29:57] 2025-07-27 00:29:03,698 | INFO     | overall cleanup function is called
[2025-07-26 20:29:57] 2025-07-27 00:29:03,753 | INFO     | PID=3918009 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 20:29:57] 2025-07-27 00:29:03,754 | INFO     | .. there are 31 such processes running
[2025-07-26 20:29:57] 2025-07-27 00:29:04,711 | INFO     | --- collectZombieJob: --- 10, [3947179]
[2025-07-26 20:29:57] 2025-07-27 00:29:04,712 | INFO     | zombie collector waiting for pid 3947179
[2025-07-26 20:29:57] 2025-07-27 00:29:04,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 20:29:57] 2025-07-27 00:29:04,712 | INFO     | collected zombie processes
[2025-07-26 20:29:57] 2025-07-27 00:29:04,712 | INFO     | will attempt to kill all subprocesses of pid=3947179
[2025-07-26 20:29:57] 2025-07-27 00:29:05,424 | INFO     | process IDs to be killed: [3947179] (in reverse order)
[2025-07-26 20:29:57] 2025-07-27 00:29:05,669 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 20:29:57] 2025-07-27 00:29:05,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 20:29:57] 2025-07-27 00:29:05,695 | INFO     | did not find any defunct processes belonging to 3947179
[2025-07-26 20:29:57] 2025-07-27 00:29:05,721 | INFO     | did not find any defunct processes belonging to 3947179
[2025-07-26 20:29:57] 2025-07-27 00:29:05,722 | INFO     | ready for new job
[2025-07-26 20:29:57] 2025-07-27 00:29:05,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 20:29:57] 2025-07-27 00:29:05,724 | INFO     | ***************************************
[2025-07-26 20:29:57] 2025-07-27 00:29:05,725 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 20:29:57] 2025-07-27 00:29:05,725 | INFO     | ***************************************
[2025-07-26 20:29:57] 2025-07-27 00:29:05,725 | INFO     | 
[2025-07-26 20:29:57] 2025-07-27 00:29:05,753 | INFO     | architecture information:
[2025-07-26 20:29:57] 2025-07-27 00:29:05,753 | INFO     | executing command: cat /etc/os-release
[2025-07-26 20:29:57] 2025-07-27 00:29:05,791 | INFO     | cat /etc/os-release:
[2025-07-26 20:29:57] NAME="CentOS Linux"
[2025-07-26 20:29:57] VERSION="7 (Core)"
[2025-07-26 20:29:57] ID="centos"
[2025-07-26 20:29:57] ID_LIKE="rhel fedora"
[2025-07-26 20:29:57] VERSION_ID="7"
[2025-07-26 20:29:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 20:29:57] ANSI_COLOR="0;31"
[2025-07-26 20:29:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 20:29:57] HOME_URL="https://www.centos.org/"
[2025-07-26 20:29:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 20:29:57] 
[2025-07-26 20:29:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 20:29:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 20:29:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 20:29:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 20:29:57] 
[2025-07-26 20:29:57] 2025-07-27 00:29:05,792 | INFO     | ***************************************
[2025-07-26 20:29:57] 2025-07-27 00:29:06,295 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 20:29:57] 2025-07-27 00:29:06,325 | INFO     | sufficient remaining disk space (76022808576 B)
[2025-07-26 20:29:57] 2025-07-27 00:29:06,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 20:29:57] 2025-07-27 00:29:06,326 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 20:29:57] 2025-07-27 00:29:06,326 | INFO     | update_server=False
[2025-07-26 20:29:57] 2025-07-27 00:29:06,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 20:29:57] 2025-07-27 00:29:06,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 20:29:57] 2025-07-27 00:29:06,539 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 20:29:57] 2025-07-27 00:29:06,540 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 20:29:57] 2025-07-27 00:29:06,540 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:29:57] 2025-07-27 00:29:06,540 | INFO     | will abort loop
[2025-07-26 20:29:57] 2025-07-27 00:29:07,088 | INFO     | all job control threads have been joined
[2025-07-26 20:29:57] 2025-07-27 00:29:07,314 | INFO     | all data control threads have been joined
[2025-07-26 20:29:57] 2025-07-27 00:29:07,337 | INFO     | [job] retrieve thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:07,498 | INFO     | [payload] failed_post thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:07,544 | INFO     | [job] job monitor thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:07,568 | INFO     | [job] validate thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:07,788 | INFO     | all payload control threads have been joined
[2025-07-26 20:29:57] 2025-07-27 00:29:08,094 | INFO     | [job] control thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:08,224 | INFO     | [data] copytool_in thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:08,321 | INFO     | [data] control thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:08,334 | INFO     | [data] copytool_out thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:08,337 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:08,410 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:08,486 | INFO     | [payload] validate_post thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:08,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:29:57] 2025-07-27 00:29:08,636 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:08,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 20:29:57] 2025-07-27 00:29:08,795 | INFO     | [payload] control thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:09,592 | INFO     | [job] queue monitor thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:12,701 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:16,957 | INFO     | job.realtimelogging is not enabled
[2025-07-26 20:29:57] 2025-07-27 00:29:17,963 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 20:29:57] 2025-07-27 00:29:18,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140661572704064)>', '<ExcThread(monitor, started 140661227505408)>']
[2025-07-26 20:29:57] 2025-07-27 00:29:23,163 | INFO     | all workflow threads have been joined
[2025-07-26 20:29:57] 2025-07-27 00:29:23,163 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 20:29:57] 2025-07-27 00:29:23,164 | INFO     | traces error code: 0
[2025-07-26 20:29:57] 2025-07-27 00:29:23,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 20:29:57] 2025-07-27 00:29:36,660 | INFO     | PID=3918009 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 20:29:57] 2025-07-27 00:29:36,661 | INFO     | .. there are 32 such processes running
[2025-07-26 20:29:57] 2025-07-27 00:29:36,661 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 20:29:57] 2025-07-27 00:29:36,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 20:29:57] 2025-07-27 00:29:36,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 20:29:57] 2025-07-27 00:29:36,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 20:29:57] 2025-07-27 00:29:36,662 | INFO     | [monitor] control thread has ended
[2025-07-26 20:29:57] 2025-07-27 00:29:37,052 [wrapper] ==== pilot stdout END ====
[2025-07-26 20:29:57] 2025-07-27 00:29:37,055 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 20:29:57] 2025-07-27 00:29:37,060 [wrapper] pilotpid: 3918009
[2025-07-26 20:29:57] 2025-07-27 00:29:37,085 [wrapper] Pilot exit status: 0
[2025-07-26 20:29:57] 2025-07-27 00:29:37,114 [wrapper] pandaids: 6745350739
[2025-07-26 20:29:57] 2025-07-27 00:29:37,250 [wrapper] cleanup supervisor_pilot 1483105 3918010
[2025-07-26 20:29:57] 2025-07-27 00:29:37,254 [wrapper] Test setup, not cleaning
[2025-07-26 20:29:57] 2025-07-27 00:29:37,258 [wrapper] apfmon messages muted
[2025-07-26 20:29:57] 2025-07-27 00:29:37,261 [wrapper] ==== wrapper stdout END ====
[2025-07-26 20:29:57] 2025-07-27 00:29:37,265 [wrapper] ==== wrapper stderr END ====
[2025-07-26 20:29:57]  *** Error codes and diagnostics ***
[2025-07-26 20:29:57]     "exeErrorCode": 0,
[2025-07-26 20:29:57]     "exeErrorDiag": "",
[2025-07-26 20:29:57]     "pilotErrorCode": 0,
[2025-07-26 20:29:57]     "pilotErrorDiag": "",
[2025-07-26 20:29:57]  *** Listing of results directory ***
[2025-07-26 20:29:57] total 396936
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 13:33 pilot3.tar.gz
[2025-07-26 20:29:57] -rwx------. 1 boincer umatlas     36292 Jul 26 13:34 runpilot2-wrapper.sh
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 13:34 queuedata.json
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas       100 Jul 26 18:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 20:29:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 18:52 run_atlas
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas       105 Jul 26 18:52 job.xml
[2025-07-26 20:29:57] -rw-r--r--. 2 boincer umatlas 187051170 Jul 26 18:52 EVNT.45743347._002351.pool.root.1
[2025-07-26 20:29:57] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 18:52 start_atlas.sh
[2025-07-26 20:29:57] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 18:52 shared
[2025-07-26 20:29:57] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 18:52 input.tar.gz
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas         0 Jul 26 18:52 boinc_lockfile
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 18:52 pandaJob.out
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas    980125 Jul 26 18:53 agis_schedconf.cvmfs.json
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas   1593052 Jul 26 18:53 agis_ddmendpoints.agis.ALL.json
[2025-07-26 20:29:57] drwx------. 4 boincer umatlas      4096 Jul 26 18:53 pilot3
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas      6931 Jul 26 20:27 init_data.xml
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas 213836932 Jul 26 20:28 HITS.45743349._041657.pool.root.1
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas       529 Jul 26 20:28 boinc_task_state.xml
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas        95 Jul 26 20:28 pilot_heartbeat.json
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas      1031 Jul 26 20:28 memory_monitor_summary.json
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas    314276 Jul 26 20:28 log.45743349._041657.job.log.tgz.1
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas      7775 Jul 26 20:29 heartbeat.json
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas       823 Jul 26 20:29 pilotlog.txt
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas    533971 Jul 26 20:29 log.45743349._041657.job.log.1
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas       357 Jul 26 20:29 output.list
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas       620 Jul 26 20:29 runtime_log
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas    870400 Jul 26 20:29 result.tar.gz
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 20:29 runtime_log.err
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas       651 Jul 26 20:29 04fMDmtxxz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZiSLDmC6eGLn.diag
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas        27 Jul 26 20:29 wrapper_checkpoint.txt
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 20:29 boinc_mmap_file
[2025-07-26 20:29:57] -rw-r--r--. 1 boincer umatlas     22398 Jul 26 20:29 stderr.txt
[2025-07-26 20:29:57] HITS file was successfully produced:
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas 213836932 Jul 26 20:28 shared/HITS.pool.root.1
[2025-07-26 20:29:57]  *** Contents of shared directory: ***
[2025-07-26 20:29:57] total 392900
[2025-07-26 20:29:57] -rw-r--r--. 2 boincer umatlas 187051170 Jul 26 18:52 ATLAS.root_0
[2025-07-26 20:29:57] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 18:52 start_atlas.sh
[2025-07-26 20:29:57] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 18:52 input.tar.gz
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas 213836932 Jul 26 20:28 HITS.pool.root.1
[2025-07-26 20:29:57] -rw-------. 1 boincer umatlas    870400 Jul 26 20:29 result.tar.gz
20:29:59 (3906910): run_atlas exited; CPU time 38019.841803
20:29:59 (3906910): called boinc_finish(0)

</stderr_txt>
]]>

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