Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:44:25 (2798397): wrapper (7.7.26015): starting
15:44:25 (2798397): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 15:44:25] Arguments: --nthreads 8
[2025-07-26 15:44:25] Threads: 8
[2025-07-26 15:44:25] Checking for CVMFS
[2025-07-26 15:44:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 15:44:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 15:44:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 15:44:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 15:44:25] 2.11.3.0 3400840 43092 200508 148792 0 106 33997006 45568001 16451 130560 0 270295986 99.767 184116743 17244 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-26 15:44:25] CVMFS is ok
[2025-07-26 15:44:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 15:44:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 15:44:25] Further information can be found at the LHC@home message board.
[2025-07-26 15:44:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 15:44:25] Checking for apptainer binary...
[2025-07-26 15:44:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 15:44:25] Running /usr/bin/apptainer --version
[2025-07-26 15:44:25] apptainer version 1.3.3-1.el9
[2025-07-26 15:44:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 15:44:26] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0005.triumf.lcg
[2025-07-26 15:44:26] apptainer works
[2025-07-26 15:44:26] Set ATHENA_PROC_NUMBER=8
[2025-07-26 15:44:26] Set ATHENA_CORE_NUMBER=8
[2025-07-26 15:44:26] Starting ATLAS job with PandaID=6745502433
[2025-07-26 15:44:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 15:50:08]  *** The last 200 lines of the pilot log: ***
[2025-07-26 15:50:08] 2025-07-26 22:49:34,523 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 15:50:08] 2025-07-26 22:49:34,523 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | WARNING  | wrong length of table data, x=[1753569981.0], y=[1864.0] (must be same and length>=4)
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | ..............................
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . Timing measurements:
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . get job = 0 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . initial setup = 3 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . payload setup = 20 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . stage-in = 0 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | . payload execution = 72 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | . stage-out = 0 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | . log creation = 0 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | ..............................
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745502433/pilotlog.txt
[2025-07-26 15:50:08] 2025-07-26 22:49:34,540 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-26 15:50:08] - Log from pilotlog.txt -
[2025-07-26 15:50:08] 2025-07-26 22:49:34,522 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745502433/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 15:50:08] 2025-07-26 22:49:34,522 | INFO     | extracted standard info from prmon json
[2025-07-26 15:50:08] 2025-07-26 22:49:34,522 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 15:50:08] 2025-07-26 22:49:34,523 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 15:50:08] 2025-07-26 22:49:34,523 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 15:50:08] 2025-07-26 22:49:34,523 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | WARNING  | wrong length of table data, x=[1753569981.0], y=[1864.0] (must be same and length>=4)
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | ..............................
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . Timing measurements:
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . get job = 0 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . initial setup = 3 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . payload setup = 20 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . stage-in = 0 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | . payload execution = 72 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | . stage-out = 0 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | . log creation = 0 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | ..............................
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745502433/pilotlog.txt
[2025-07-26 15:50:08] 2025-07-26 22:49:34,540 | WARNING  | 
[2025-07-26 15:50:08] [begin log extracts]
[2025-07-26 15:50:08] - Log from pilotlog.txt -
[2025-07-26 15:50:08] 2025-07-26 22:49:34,522 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745502433/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 15:50:08] 2025-07-26 22:49:34,522 | INFO     | extracted standard info from prmon json
[2025-07-26 15:50:08] 2025-07-26 22:49:34,522 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 15:50:08] 2025-07-26 22:49:34,523 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 15:50:08] 2025-07-26 22:49:34,523 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 15:50:08] 2025-07-26 22:49:34,523 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | WARNING  | wrong length of table data, x=[1753569981.0], y=[1864.0] (must be same and length>=4)
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | ..............................
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . Timing measurements:
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . get job = 0 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . initial setup = 3 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . payload setup = 20 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,524 | INFO     | . stage-in = 0 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | . payload execution = 72 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | . stage-out = 0 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | . log creation = 0 s
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | ..............................
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 15:50:08] 2025-07-26 22:49:34,525 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745502433/pilotlog.txt
[2025-07-26 15:50:08] [end log extracts]
[2025-07-26 15:50:08] 2025-07-26 22:49:34,541 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-26 15:50:08] 2025-07-26 22:49:34,542 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-26 15:50:08] 2025-07-26 22:49:35,015 | INFO     | 
[2025-07-26 15:50:08] 2025-07-26 22:49:35,045 | INFO     | job summary report
[2025-07-26 15:50:08] 2025-07-26 22:49:35,045 | INFO     | --------------------------------------------------
[2025-07-26 15:50:08] 2025-07-26 22:49:35,045 | INFO     | PanDA job id: 6745502433
[2025-07-26 15:50:08] 2025-07-26 22:49:35,046 | INFO     | task id: 45743349
[2025-07-26 15:50:08] 2025-07-26 22:49:35,046 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-26 15:47:06,590 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-26 15:50:08] 2025-07-26 22:49:35,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 15:50:08] 2025-07-26 22:49:35,046 | INFO     | pilot state: failed 
[2025-07-26 15:50:08] 2025-07-26 22:49:35,046 | INFO     | transexitcode: 65
[2025-07-26 15:50:08] 2025-07-26 22:49:35,046 | INFO     | exeerrorcode: 65
[2025-07-26 15:50:08] 2025-07-26 22:49:35,046 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 15:50:08] 2025-07-26 22:49:35,047 | INFO     | exitcode: 65
[2025-07-26 15:50:08] 2025-07-26 22:49:35,047 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 15:50:08] 2025-07-26 22:49:35,048 | INFO     | cpuconsumptiontime: 18 s
[2025-07-26 15:50:08] 2025-07-26 22:49:35,048 | INFO     | nevents: 0
[2025-07-26 15:50:08] 2025-07-26 22:49:35,048 | INFO     | neventsw: 0
[2025-07-26 15:50:08] 2025-07-26 22:49:35,048 | INFO     | pid: 2808375
[2025-07-26 15:50:08] 2025-07-26 22:49:35,048 | INFO     | pgrp: 2808375
[2025-07-26 15:50:08] 2025-07-26 22:49:35,048 | INFO     | corecount: 8
[2025-07-26 15:50:08] 2025-07-26 22:49:35,048 | INFO     | event service: False
[2025-07-26 15:50:08] 2025-07-26 22:49:35,048 | INFO     | sizes: {0: 2396647, 1: 2397329, 2: 2397528, 3: 2397528, 14: 2397556, 15: 2397846, 25: 2398002, 96: 2421229, 98: 2425521, 101: 2425549, 231: 2425715}
[2025-07-26 15:50:08] 2025-07-26 22:49:35,048 | INFO     | --------------------------------------------------
[2025-07-26 15:50:08] 2025-07-26 22:49:35,048 | INFO     | 
[2025-07-26 15:50:08] 2025-07-26 22:49:35,049 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-26 15:50:08] 2025-07-26 22:49:35,093 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,094 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,094 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,094 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,094 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,094 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,095 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,095 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,096 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,096 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 15:50:08] 2025-07-26 22:49:35,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,096 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 15:50:08] 2025-07-26 22:49:35,096 | INFO     | job 6745502433 has completed (purged errors)
[2025-07-26 15:50:08] 2025-07-26 22:49:35,097 | INFO     | overall cleanup function is called
[2025-07-26 15:50:08] 2025-07-26 22:49:35,271 | INFO     | PID=2801996 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 15:50:08] 2025-07-26 22:49:35,271 | INFO     | .. there are 26 such processes running
[2025-07-26 15:50:08] 2025-07-26 22:49:36,105 | INFO     | --- collectZombieJob: --- 10, [2808375]
[2025-07-26 15:50:08] 2025-07-26 22:49:36,105 | INFO     | zombie collector waiting for pid 2808375
[2025-07-26 15:50:08] 2025-07-26 22:49:36,106 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 15:50:08] 2025-07-26 22:49:36,106 | INFO     | collected zombie processes
[2025-07-26 15:50:08] 2025-07-26 22:49:36,106 | INFO     | will attempt to kill all subprocesses of pid=2808375
[2025-07-26 15:50:08] 2025-07-26 22:49:36,737 | INFO     | process IDs to be killed: [2808375] (in reverse order)
[2025-07-26 15:50:08] 2025-07-26 22:49:37,258 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 15:50:08] 2025-07-26 22:49:37,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 15:50:08] 2025-07-26 22:49:37,267 | INFO     | did not find any defunct processes belonging to 2808375
[2025-07-26 15:50:08] 2025-07-26 22:49:37,275 | INFO     | did not find any defunct processes belonging to 2808375
[2025-07-26 15:50:08] 2025-07-26 22:49:37,275 | INFO     | ready for new job
[2025-07-26 15:50:08] 2025-07-26 22:49:37,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 15:50:08] 2025-07-26 22:49:37,277 | INFO     | ***************************************
[2025-07-26 15:50:08] 2025-07-26 22:49:37,278 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 15:50:08] 2025-07-26 22:49:37,278 | INFO     | ***************************************
[2025-07-26 15:50:08] 2025-07-26 22:49:37,278 | INFO     | 
[2025-07-26 15:50:08] 2025-07-26 22:49:37,298 | INFO     | architecture information:
[2025-07-26 15:50:08] 2025-07-26 22:49:37,298 | INFO     | executing command: cat /etc/os-release
[2025-07-26 15:50:08] 2025-07-26 22:49:37,411 | INFO     | cat /etc/os-release:
[2025-07-26 15:50:08] NAME="CentOS Linux"
[2025-07-26 15:50:08] VERSION="7 (Core)"
[2025-07-26 15:50:08] ID="centos"
[2025-07-26 15:50:08] ID_LIKE="rhel fedora"
[2025-07-26 15:50:08] VERSION_ID="7"
[2025-07-26 15:50:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 15:50:08] ANSI_COLOR="0;31"
[2025-07-26 15:50:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 15:50:08] HOME_URL="https://www.centos.org/"
[2025-07-26 15:50:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 15:50:08] 
[2025-07-26 15:50:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 15:50:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 15:50:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 15:50:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 15:50:08] 
[2025-07-26 15:50:08] 2025-07-26 22:49:37,412 | INFO     | ***************************************
[2025-07-26 15:50:08] 2025-07-26 22:49:37,915 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-26 15:50:08] 2025-07-26 22:49:37,953 | INFO     | sufficient remaining disk space (1289729605632 B)
[2025-07-26 15:50:08] 2025-07-26 22:49:37,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 15:50:08] 2025-07-26 22:49:37,953 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 15:50:08] 2025-07-26 22:49:37,954 | INFO     | update_server=False
[2025-07-26 15:50:08] 2025-07-26 22:49:37,954 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 15:50:08] 2025-07-26 22:49:37,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 15:50:08] 2025-07-26 22:49:37,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 15:50:08] 2025-07-26 22:49:37,959 | INFO     | aborting loop
[2025-07-26 15:50:08] 2025-07-26 22:49:38,526 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 15:50:08] 2025-07-26 22:49:38,577 | INFO     | all data control threads have been joined
[2025-07-26 15:50:08] 2025-07-26 22:49:38,960 | INFO     | [job] retrieve thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:38,974 | INFO     | [job] job monitor thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:39,061 | INFO     | all payload control threads have been joined
[2025-07-26 15:50:08] 2025-07-26 22:49:39,258 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:39,347 | INFO     | all job control threads have been joined
[2025-07-26 15:50:08] 2025-07-26 22:49:39,411 | INFO     | [job] validate thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:39,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:39,583 | INFO     | [data] control thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:39,691 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 15:50:08] 2025-07-26 22:49:40,022 | INFO     | [payload] failed_post thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:40,067 | INFO     | [payload] control thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:40,245 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:40,246 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:40,352 | INFO     | [job] control thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:40,379 | INFO     | [data] copytool_in thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:40,505 | INFO     | [payload] validate_post thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:40,533 | INFO     | [data] copytool_out thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:40,697 | INFO     | [job] queue monitor thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:41,964 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 15:50:08] 2025-07-26 22:49:42,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127608035136)>', '<ExcThread(monitor, started 140126923515648)>']
[2025-07-26 15:50:08] 2025-07-26 22:49:47,614 | INFO     | all workflow threads have been joined
[2025-07-26 15:50:08] 2025-07-26 22:49:47,614 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 15:50:08] 2025-07-26 22:49:47,615 | INFO     | traces error code: 0
[2025-07-26 15:50:08] 2025-07-26 22:49:47,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 15:50:08] 2025-07-26 22:50:07,613 | INFO     | PID=2801996 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 15:50:08] 2025-07-26 22:50:07,614 | INFO     | .. there are 26 such processes running
[2025-07-26 15:50:08] 2025-07-26 22:50:07,615 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 15:50:08] 2025-07-26 22:50:07,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 15:50:08] 2025-07-26 22:50:07,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 15:50:08] 2025-07-26 22:50:07,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 15:50:08] 2025-07-26 22:50:07,615 | INFO     | [monitor] control thread has ended
[2025-07-26 15:50:08] 2025-07-26 22:50:07,730 [wrapper] ==== pilot stdout END ====
[2025-07-26 15:50:08] 2025-07-26 22:50:07,736 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 15:50:08] 2025-07-26 22:50:07,751 [wrapper] pilotpid: 2801996
[2025-07-26 15:50:08] 2025-07-26 22:50:07,754 [wrapper] Pilot exit status: 0
[2025-07-26 15:50:08] 2025-07-26 22:50:07,795 [wrapper] pandaids: 6745502433
[2025-07-26 15:50:08] 2025-07-26 22:50:07,945 [wrapper] cleanup supervisor_pilot 2802002 2801997
[2025-07-26 15:50:08] 2025-07-26 22:50:07,982 [wrapper] Test setup, not cleaning
[2025-07-26 15:50:08] 2025-07-26 22:50:08,037 [wrapper] apfmon messages muted
[2025-07-26 15:50:08] 2025-07-26 22:50:08,044 [wrapper] ==== wrapper stdout END ====
[2025-07-26 15:50:08] 2025-07-26 22:50:08,077 [wrapper] ==== wrapper stderr END ====
[2025-07-26 15:50:08]  *** Error codes and diagnostics ***
[2025-07-26 15:50:08]     "exeErrorCode": 65,
[2025-07-26 15:50:08]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 15:50:08]     "pilotErrorCode": 1305,
[2025-07-26 15:50:08]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 15:50:08]  *** Listing of results directory ***
[2025-07-26 15:50:08] total 147136
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc    530466 Jul 26 13:19 pilot3.tar.gz
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc      5112 Jul 26 13:27 queuedata.json
[2025-07-26 15:50:08] -rwx------. 1 boinc boinc     36292 Jul 26 13:28 runpilot2-wrapper.sh
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc       100 Jul 26 15:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 15:50:08] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 15:44 run_atlas
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc       105 Jul 26 15:44 job.xml
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc      6446 Jul 26 15:44 init_data.xml
[2025-07-26 15:50:08] -rw-r--r--. 2 boinc boinc 146582527 Jul 26 15:44 EVNT.45743347._002510.pool.root.1
[2025-07-26 15:50:08] -rw-r--r--. 2 boinc boinc     15095 Jul 26 15:44 start_atlas.sh
[2025-07-26 15:50:08] drwxrwx--x. 2 boinc boinc      4096 Jul 26 15:44 shared
[2025-07-26 15:50:08] -rw-r--r--. 2 boinc boinc    542896 Jul 26 15:44 input.tar.gz
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc         0 Jul 26 15:44 boinc_lockfile
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc      2563 Jul 26 15:44 pandaJob.out
[2025-07-26 15:50:08] -rw-------. 1 boinc boinc    980125 Jul 26 15:44 agis_schedconf.cvmfs.json
[2025-07-26 15:50:08] -rw-------. 1 boinc boinc   1593052 Jul 26 15:45 agis_ddmendpoints.agis.ALL.json
[2025-07-26 15:50:08] drwx------. 4 boinc boinc      4096 Jul 26 15:45 pilot3
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc       525 Jul 26 15:47 boinc_task_state.xml
[2025-07-26 15:50:08] -rw-------. 1 boinc boinc       958 Jul 26 15:47 memory_monitor_summary.json
[2025-07-26 15:50:08] -rw-------. 1 boinc boinc     21841 Jul 26 15:47 log.45743349._043962.job.log.tgz.1
[2025-07-26 15:50:08] -rw-------. 1 boinc boinc      8384 Jul 26 15:49 heartbeat.json
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc      8192 Jul 26 15:50 boinc_mmap_file
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc        23 Jul 26 15:50 wrapper_checkpoint.txt
[2025-07-26 15:50:08] -rw-------. 1 boinc boinc        95 Jul 26 15:50 pilot_heartbeat.json
[2025-07-26 15:50:08] -rw-------. 1 boinc boinc       823 Jul 26 15:50 pilotlog.txt
[2025-07-26 15:50:08] -rw-------. 1 boinc boinc     82209 Jul 26 15:50 log.45743349._043962.job.log.1
[2025-07-26 15:50:08] -rw-------. 1 boinc boinc       188 Jul 26 15:50 output.list
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc       620 Jul 26 15:50 runtime_log
[2025-07-26 15:50:08] -rw-------. 1 boinc boinc    122880 Jul 26 15:50 result.tar.gz
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc      8648 Jul 26 15:50 runtime_log.err
[2025-07-26 15:50:08] -rw-------. 1 boinc boinc       647 Jul 26 15:50 K7QODmLg0z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ3SLDmIqNMrn.diag
[2025-07-26 15:50:08] -rw-r--r--. 1 boinc boinc     22118 Jul 26 15:50 stderr.txt
[2025-07-26 15:50:08] No HITS result produced
[2025-07-26 15:50:08]  *** Contents of shared directory: ***
[2025-07-26 15:50:08] total 143820
[2025-07-26 15:50:08] -rw-r--r--. 2 boinc boinc 146582527 Jul 26 15:44 ATLAS.root_0
[2025-07-26 15:50:08] -rw-r--r--. 2 boinc boinc     15095 Jul 26 15:44 start_atlas.sh
[2025-07-26 15:50:08] -rw-r--r--. 2 boinc boinc    542896 Jul 26 15:44 input.tar.gz
[2025-07-26 15:50:08] -rw-------. 1 boinc boinc    122880 Jul 26 15:50 result.tar.gz
15:50:10 (2798397): run_atlas exited; CPU time 28.998485
15:50:10 (2798397): called boinc_finish(0)

</stderr_txt>
]]>

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