Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:46:21 (32036): wrapper (7.7.26015): starting
18:46:21 (32036): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 18:46:21] Arguments: --nthreads 8
[2025-07-26 18:46:21] Threads: 8
[2025-07-26 18:46:21] Checking for CVMFS
[2025-07-26 18:46:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 18:46:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 18:46:22] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 18:46:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 18:46:22] 2.11.2.0 2840 111180 109300 148792 0 59 13322739 20275201 1 130560 0 29980798 99.954 10894489 11181 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 18:46:22] CVMFS is ok
[2025-07-26 18:46:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 18:46:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 18:46:22] Further information can be found at the LHC@home message board.
[2025-07-26 18:46:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 18:46:22] Checking for apptainer binary...
[2025-07-26 18:46:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 18:46:22] Running /usr/bin/apptainer --version
[2025-07-26 18:46:22] apptainer version 1.3.2-1.el7
[2025-07-26 18:46:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 18:46:23] c-204-8.aglt2.org
[2025-07-26 18:46:23] apptainer works
[2025-07-26 18:46:23] Set ATHENA_PROC_NUMBER=8
[2025-07-26 18:46:23] Set ATHENA_CORE_NUMBER=8
[2025-07-26 18:46:23] Starting ATLAS job with PandaID=6745350649
[2025-07-26 18:46:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 21:11:55]  *** The last 200 lines of the pilot log: ***
[2025-07-26 21:11:55] 2025-07-27 01:11:20,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:11:55] 2025-07-27 01:11:20,660 | INFO     | PID=3446 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 21:11:55] 2025-07-27 01:11:22,804 | INFO     | monitor loop #642: job 0:6745350649 is in state 'finished'
[2025-07-26 21:11:55] 2025-07-27 01:11:22,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:11:55] 2025-07-27 01:11:23,489 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 21:11:55] 2025-07-27 01:11:23,492 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-07-26 21:11:55] 2025-07-27 01:11:23,494 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745350649/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:11:55] 2025-07-27 01:11:23,495 | INFO     | extracted standard info from prmon json
[2025-07-26 21:11:55] 2025-07-27 01:11:23,495 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:11:55] 2025-07-27 01:11:23,496 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:11:55] 2025-07-27 01:11:23,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:11:55] 2025-07-27 01:11:23,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:11:55] 2025-07-27 01:11:23,500 | INFO     | fitting pss+swap vs Time
[2025-07-26 21:11:55] 2025-07-27 01:11:23,500 | INFO     | sum of square deviations: 887813855.5
[2025-07-26 21:11:55] 2025-07-27 01:11:23,501 | INFO     | sum of deviations: 5349737636.999998
[2025-07-26 21:11:55] 2025-07-27 01:11:23,502 | INFO     | mean x: 1753574332.5
[2025-07-26 21:11:55] 2025-07-27 01:11:23,502 | INFO     | mean y: 2513401.1267605633
[2025-07-26 21:11:55] 2025-07-27 01:11:23,502 | INFO     | -- intersect: -10564073893.874516
[2025-07-26 21:11:55] 2025-07-27 01:11:23,502 | INFO     | intersect: -10564073893.874516
[2025-07-26 21:11:55] 2025-07-27 01:11:23,502 | INFO     | chi2: 1.5178857695616004
[2025-07-26 21:11:55] 2025-07-27 01:11:23,503 | INFO     | sum of square deviations: 797291228.0
[2025-07-26 21:11:55] 2025-07-27 01:11:23,503 | INFO     | sum of deviations: 5106028912.000004
[2025-07-26 21:11:55] 2025-07-27 01:11:23,503 | INFO     | mean x: 1753574180.0
[2025-07-26 21:11:55] 2025-07-27 01:11:23,503 | INFO     | mean y: 2512990.4890510947
[2025-07-26 21:11:55] 2025-07-27 01:11:23,504 | INFO     | -- intersect: -11227762908.666706
[2025-07-26 21:11:55] 2025-07-27 01:11:23,504 | INFO     | intersect: -11227762908.666706
[2025-07-26 21:11:55] 2025-07-27 01:11:23,504 | INFO     | chi2: 1.5189078185480924
[2025-07-26 21:11:55] 2025-07-27 01:11:23,504 | INFO     | current chi2=1.5189078185480924 (change=-0.06733372214084615 %)
[2025-07-26 21:11:55] 2025-07-27 01:11:23,504 | INFO     | right removable region: 136
[2025-07-26 21:11:55] 2025-07-27 01:11:23,505 | INFO     | sum of square deviations: 797291228.0
[2025-07-26 21:11:55] 2025-07-27 01:11:23,505 | INFO     | sum of deviations: -15182566329.999998
[2025-07-26 21:11:55] 2025-07-27 01:11:23,505 | INFO     | mean x: 1753574485.0
[2025-07-26 21:11:55] 2025-07-27 01:11:23,505 | INFO     | mean y: 2547414.2116788323
[2025-07-26 21:11:55] 2025-07-27 01:11:23,506 | INFO     | -- intersect: 33395315323.992428
[2025-07-26 21:11:55] 2025-07-27 01:11:23,506 | INFO     | intersect: 33395315323.992428
[2025-07-26 21:11:55] 2025-07-27 01:11:23,506 | INFO     | chi2: 0.12050884317695146
[2025-07-26 21:11:55] 2025-07-27 01:11:23,506 | INFO     | current chi2=0.12050884317695146 (change=92.06074359523397 %)
[2025-07-26 21:11:55] 2025-07-27 01:11:23,506 | INFO     | sum of square deviations: 713140813.0
[2025-07-26 21:11:55] 2025-07-27 01:11:23,507 | INFO     | sum of deviations: -12977608266.5
[2025-07-26 21:11:55] 2025-07-27 01:11:23,507 | INFO     | mean x: 1753574637.5
[2025-07-26 21:11:55] 2025-07-27 01:11:23,507 | INFO     | mean y: 2543342.3106060605
[2025-07-26 21:11:55] 2025-07-27 01:11:23,507 | INFO     | -- intersect: 31913779239.483616
[2025-07-26 21:11:55] 2025-07-27 01:11:23,507 | INFO     | intersect: 31913779239.483616
[2025-07-26 21:11:55] 2025-07-27 01:11:23,508 | INFO     | chi2: 0.1092670738373215
[2025-07-26 21:11:55] 2025-07-27 01:11:23,508 | INFO     | current chi2=0.1092670738373215 (change=9.328584561319616 %)
[2025-07-26 21:11:55] 2025-07-27 01:11:23,508 | INFO     | left removable region: 20
[2025-07-26 21:11:55] 2025-07-27 01:11:23,508 | INFO     | sum of square deviations: 483971865.0
[2025-07-26 21:11:55] 2025-07-27 01:11:23,509 | INFO     | sum of deviations: -4279622170.5
[2025-07-26 21:11:55] 2025-07-27 01:11:23,509 | INFO     | mean x: 1753574759.5
[2025-07-26 21:11:55] 2025-07-27 01:11:23,509 | INFO     | mean y: 2525804.2327586208
[2025-07-26 21:11:55] 2025-07-27 01:11:23,509 | INFO     | -- intersect: 15508876402.496162
[2025-07-26 21:11:55] 2025-07-27 01:11:23,509 | INFO     | intersect: 15508876402.496162
[2025-07-26 21:11:55] 2025-07-27 01:11:23,510 | INFO     | chi2: 0.06586561414512981
[2025-07-26 21:11:55] 2025-07-27 01:11:23,510 | INFO     | -- intersect: 15508876402.496162
[2025-07-26 21:11:55] 2025-07-27 01:11:23,510 | INFO     | current memory leak: -8.84 B/s (using 116 data points, chi2=0.07)
[2025-07-26 21:11:55] 2025-07-27 01:11:23,510 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2025-07-26 21:11:55] 2025-07-27 01:11:23,510 | INFO     | ..............................
[2025-07-26 21:11:55] 2025-07-27 01:11:23,511 | INFO     | . Timing measurements:
[2025-07-26 21:11:55] 2025-07-27 01:11:23,511 | INFO     | . get job = 0 s
[2025-07-26 21:11:55] 2025-07-27 01:11:23,511 | INFO     | . initial setup = 2 s
[2025-07-26 21:11:55] 2025-07-27 01:11:23,511 | INFO     | . payload setup = 11 s
[2025-07-26 21:11:55] 2025-07-27 01:11:23,511 | INFO     | . stage-in = 0 s
[2025-07-26 21:11:55] 2025-07-27 01:11:23,511 | INFO     | . payload execution = 8643 s
[2025-07-26 21:11:55] 2025-07-27 01:11:23,511 | INFO     | . stage-out = 0 s
[2025-07-26 21:11:55] 2025-07-27 01:11:23,511 | INFO     | . log creation = 0 s
[2025-07-26 21:11:55] 2025-07-27 01:11:23,511 | INFO     | ..............................
[2025-07-26 21:11:55] 2025-07-27 01:11:23,603 | INFO     | 
[2025-07-26 21:11:55] 2025-07-27 01:11:23,604 | INFO     | job summary report
[2025-07-26 21:11:55] 2025-07-27 01:11:23,604 | INFO     | --------------------------------------------------
[2025-07-26 21:11:55] 2025-07-27 01:11:23,604 | INFO     | PanDA job id: 6745350649
[2025-07-26 21:11:55] 2025-07-27 01:11:23,604 | INFO     | task id: 45743349
[2025-07-26 21:11:55] 2025-07-27 01:11:23,605 | INFO     | errors: (none)
[2025-07-26 21:11:55] 2025-07-27 01:11:23,605 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 21:11:55] 2025-07-27 01:11:23,605 | INFO     | pilot state: finished 
[2025-07-26 21:11:55] 2025-07-27 01:11:23,605 | INFO     | transexitcode: 0
[2025-07-26 21:11:55] 2025-07-27 01:11:23,605 | INFO     | exeerrorcode: 0
[2025-07-26 21:11:55] 2025-07-27 01:11:23,606 | INFO     | exeerrordiag: 
[2025-07-26 21:11:55] 2025-07-27 01:11:23,606 | INFO     | exitcode: 0
[2025-07-26 21:11:55] 2025-07-27 01:11:23,606 | INFO     | exitmsg: OK
[2025-07-26 21:11:55] 2025-07-27 01:11:23,606 | INFO     | cpuconsumptiontime: 64747 s
[2025-07-26 21:11:55] 2025-07-27 01:11:23,606 | INFO     | nevents: 400
[2025-07-26 21:11:55] 2025-07-27 01:11:23,606 | INFO     | neventsw: 0
[2025-07-26 21:11:55] 2025-07-27 01:11:23,607 | INFO     | pid: 9996
[2025-07-26 21:11:55] 2025-07-27 01:11:23,607 | INFO     | pgrp: 9996
[2025-07-26 21:11:55] 2025-07-27 01:11:23,607 | INFO     | corecount: 8
[2025-07-26 21:11:55] 2025-07-27 01:11:23,607 | INFO     | event service: False
[2025-07-26 21:11:55] 2025-07-27 01:11:23,607 | INFO     | sizes: {0: 2397475, 6: 2397737, 11: 2397765, 8659: 2425674, 8660: 2434728, 8669: 2434866}
[2025-07-26 21:11:55] 2025-07-27 01:11:23,607 | INFO     | --------------------------------------------------
[2025-07-26 21:11:55] 2025-07-27 01:11:23,608 | INFO     | 
[2025-07-26 21:11:55] 2025-07-27 01:11:23,608 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 21:11:55] 2025-07-27 01:11:23,634 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,635 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,635 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,635 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,636 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,636 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,637 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,637 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,637 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,637 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,638 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 21:11:55] 2025-07-27 01:11:23,638 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,638 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 21:11:55] 2025-07-27 01:11:23,639 | INFO     | job 6745350649 has completed (purged errors)
[2025-07-26 21:11:55] 2025-07-27 01:11:23,639 | INFO     | overall cleanup function is called
[2025-07-26 21:11:55] 2025-07-27 01:11:24,645 | INFO     | --- collectZombieJob: --- 10, [9996]
[2025-07-26 21:11:55] 2025-07-27 01:11:24,646 | INFO     | zombie collector waiting for pid 9996
[2025-07-26 21:11:55] 2025-07-27 01:11:24,658 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 21:11:55] 2025-07-27 01:11:24,658 | INFO     | collected zombie processes
[2025-07-26 21:11:55] 2025-07-27 01:11:24,658 | INFO     | will attempt to kill all subprocesses of pid=9996
[2025-07-26 21:11:55] 2025-07-27 01:11:24,745 | INFO     | process IDs to be killed: [9996] (in reverse order)
[2025-07-26 21:11:55] 2025-07-27 01:11:24,805 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 21:11:55] 2025-07-27 01:11:24,806 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 21:11:55] 2025-07-27 01:11:24,810 | INFO     | did not find any defunct processes belonging to 9996
[2025-07-26 21:11:55] 2025-07-27 01:11:24,813 | INFO     | did not find any defunct processes belonging to 9996
[2025-07-26 21:11:55] 2025-07-27 01:11:24,813 | INFO     | ready for new job
[2025-07-26 21:11:55] 2025-07-27 01:11:24,814 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 21:11:55] 2025-07-27 01:11:24,815 | INFO     | ***************************************
[2025-07-26 21:11:55] 2025-07-27 01:11:24,815 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 21:11:55] 2025-07-27 01:11:24,816 | INFO     | ***************************************
[2025-07-26 21:11:55] 2025-07-27 01:11:24,816 | INFO     | 
[2025-07-26 21:11:55] 2025-07-27 01:11:24,816 | INFO     | architecture information:
[2025-07-26 21:11:55] 2025-07-27 01:11:24,817 | INFO     | executing command: cat /etc/os-release
[2025-07-26 21:11:55] 2025-07-27 01:11:24,835 | INFO     | cat /etc/os-release:
[2025-07-26 21:11:55] NAME="CentOS Linux"
[2025-07-26 21:11:55] VERSION="7 (Core)"
[2025-07-26 21:11:55] ID="centos"
[2025-07-26 21:11:55] ID_LIKE="rhel fedora"
[2025-07-26 21:11:55] VERSION_ID="7"
[2025-07-26 21:11:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 21:11:55] ANSI_COLOR="0;31"
[2025-07-26 21:11:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 21:11:55] HOME_URL="https://www.centos.org/"
[2025-07-26 21:11:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 21:11:55] 
[2025-07-26 21:11:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 21:11:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 21:11:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 21:11:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 21:11:55] 
[2025-07-26 21:11:55] 2025-07-27 01:11:24,835 | INFO     | ***************************************
[2025-07-26 21:11:55] 2025-07-27 01:11:25,339 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 21:11:55] 2025-07-27 01:11:25,358 | INFO     | sufficient remaining disk space (18651021312 B)
[2025-07-26 21:11:55] 2025-07-27 01:11:25,359 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 21:11:55] 2025-07-27 01:11:25,359 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 21:11:55] 2025-07-27 01:11:25,359 | INFO     | update_server=False
[2025-07-26 21:11:55] 2025-07-27 01:11:25,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 21:11:55] 2025-07-27 01:11:25,360 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:11:55] 2025-07-27 01:11:25,472 | INFO     | all payload control threads have been joined
[2025-07-26 21:11:55] 2025-07-27 01:11:25,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 21:11:55] 2025-07-27 01:11:25,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 21:11:55] 2025-07-27 01:11:25,762 | INFO     | all data control threads have been joined
[2025-07-26 21:11:55] 2025-07-27 01:11:26,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:11:55] 2025-07-27 01:11:26,313 | INFO     | aborting loop
[2025-07-26 21:11:55] 2025-07-27 01:11:26,365 | INFO     | [job] retrieve thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:26,366 | INFO     | [job] queue monitor thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:26,477 | INFO     | [payload] control thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:26,756 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:26,767 | INFO     | [data] control thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:26,785 | INFO     | [job] validate thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:26,820 | INFO     | all job control threads have been joined
[2025-07-26 21:11:55] 2025-07-27 01:11:26,861 | INFO     | [payload] failed_post thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:27,055 | INFO     | [data] copytool_in thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:27,281 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:27,283 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:27,317 | INFO     | [job] job monitor thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:27,563 | INFO     | [data] copytool_out thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:27,651 | INFO     | [payload] validate_post thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:27,826 | INFO     | [job] control thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:29,646 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:35,686 | INFO     | job.realtimelogging is not enabled
[2025-07-26 21:11:55] 2025-07-27 01:11:36,692 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 21:11:55] 2025-07-27 01:11:36,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045940270912)>', '<ExcThread(monitor, started 140044899698432)>']
[2025-07-26 21:11:55] 2025-07-27 01:11:41,843 | INFO     | all workflow threads have been joined
[2025-07-26 21:11:55] 2025-07-27 01:11:41,843 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 21:11:55] 2025-07-27 01:11:41,843 | INFO     | traces error code: 0
[2025-07-26 21:11:55] 2025-07-27 01:11:41,844 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 21:11:55] 2025-07-27 01:11:54,856 | INFO     | PID=3446 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 21:11:55] 2025-07-27 01:11:54,857 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 21:11:55] 2025-07-27 01:11:54,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 21:11:55] 2025-07-27 01:11:54,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 21:11:55] 2025-07-27 01:11:54,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 21:11:55] 2025-07-27 01:11:54,857 | INFO     | [monitor] control thread has ended
[2025-07-26 21:11:55] 2025-07-27 01:11:54,959 [wrapper] ==== pilot stdout END ====
[2025-07-26 21:11:55] 2025-07-27 01:11:54,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 21:11:55] 2025-07-27 01:11:54,968 [wrapper] pilotpid: 3446
[2025-07-26 21:11:55] 2025-07-27 01:11:54,972 [wrapper] Pilot exit status: 0
[2025-07-26 21:11:55] 2025-07-27 01:11:54,991 [wrapper] pandaids: 6745350649
[2025-07-26 21:11:55] 2025-07-27 01:11:55,034 [wrapper] cleanup supervisor_pilot 11383 3447
[2025-07-26 21:11:55] 2025-07-27 01:11:55,039 [wrapper] Test setup, not cleaning
[2025-07-26 21:11:55] 2025-07-27 01:11:55,043 [wrapper] apfmon messages muted
[2025-07-26 21:11:55] 2025-07-27 01:11:55,048 [wrapper] ==== wrapper stdout END ====
[2025-07-26 21:11:55] 2025-07-27 01:11:55,052 [wrapper] ==== wrapper stderr END ====
[2025-07-26 21:11:55]  *** Error codes and diagnostics ***
[2025-07-26 21:11:55]     "exeErrorCode": 0,
[2025-07-26 21:11:55]     "exeErrorDiag": "",
[2025-07-26 21:11:55]     "pilotErrorCode": 0,
[2025-07-26 21:11:55]     "pilotErrorDiag": "",
[2025-07-26 21:11:55]  *** Listing of results directory ***
[2025-07-26 21:11:55] total 395124
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 13:17 pilot3.tar.gz
[2025-07-26 21:11:55] -rwx------ 1 boincer umatlas     36292 Jul 26 13:29 runpilot2-wrapper.sh
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 13:29 queuedata.json
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas       100 Jul 26 18:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 21:11:55] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 18:46 run_atlas
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas       105 Jul 26 18:46 job.xml
[2025-07-26 21:11:55] -rw-r--r-- 2 boincer umatlas 190537805 Jul 26 18:46 EVNT.45743347._002347.pool.root.1
[2025-07-26 21:11:55] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 18:46 start_atlas.sh
[2025-07-26 21:11:55] drwxrwx--x 2 boincer umatlas      4096 Jul 26 18:46 shared
[2025-07-26 21:11:55] -rw-r--r-- 2 boincer umatlas    542895 Jul 26 18:46 input.tar.gz
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas         0 Jul 26 18:46 boinc_lockfile
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 18:46 pandaJob.out
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas    980125 Jul 26 18:46 agis_schedconf.cvmfs.json
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas   1593052 Jul 26 18:46 agis_ddmendpoints.agis.ALL.json
[2025-07-26 21:11:55] drwx------ 4 boincer umatlas      4096 Jul 26 18:46 pilot3
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas 207934947 Jul 26 21:10 HITS.45743349._041567.pool.root.1
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas      5824 Jul 26 21:10 init_data.xml
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas       529 Jul 26 21:10 boinc_task_state.xml
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas      1049 Jul 26 21:11 memory_monitor_summary.json
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas    347055 Jul 26 21:11 log.45743349._041567.job.log.tgz.1
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas      7838 Jul 26 21:11 heartbeat.json
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 21:11 boinc_mmap_file
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas        27 Jul 26 21:11 wrapper_checkpoint.txt
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas        95 Jul 26 21:11 pilot_heartbeat.json
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas       744 Jul 26 21:11 pilotlog.txt
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas    784999 Jul 26 21:11 log.45743349._041567.job.log.1
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas       357 Jul 26 21:11 output.list
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas       620 Jul 26 21:11 runtime_log
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas   1146880 Jul 26 21:11 result.tar.gz
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas       659 Jul 26 21:11 VeRNDmqsxz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmo80KDmUj09Xo.diag
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas      8655 Jul 26 21:11 runtime_log.err
[2025-07-26 21:11:55] -rw-r--r-- 1 boincer umatlas     21202 Jul 26 21:11 stderr.txt
[2025-07-26 21:11:55] HITS file was successfully produced:
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas 207934947 Jul 26 21:10 shared/HITS.pool.root.1
[2025-07-26 21:11:55]  *** Contents of shared directory: ***
[2025-07-26 21:11:55] total 390812
[2025-07-26 21:11:55] -rw-r--r-- 2 boincer umatlas 190537805 Jul 26 18:46 ATLAS.root_0
[2025-07-26 21:11:55] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 18:46 start_atlas.sh
[2025-07-26 21:11:55] -rw-r--r-- 2 boincer umatlas    542895 Jul 26 18:46 input.tar.gz
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas 207934947 Jul 26 21:10 HITS.pool.root.1
[2025-07-26 21:11:55] -rw------- 1 boincer umatlas   1146880 Jul 26 21:11 result.tar.gz
21:11:56 (32036): run_atlas exited; CPU time 64685.214529
21:11:56 (32036): called boinc_finish(0)

</stderr_txt>
]]>

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