Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
18:28:31 (1751420): wrapper (7.7.26015): starting
18:28:31 (1751420): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 18:28:31] Arguments: --nthreads 12
[2025-07-27 18:28:31] Threads: 12
[2025-07-27 18:28:31] Checking for CVMFS
[2025-07-27 18:28:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 18:28:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 18:28:31] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 18:28:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 18:28:31] 2.13.1.0 50093 7992 74844 148821 0 57 3454625 4096001 1002 130560 0 15963193 99.996 292765 287 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-27 18:28:31] CVMFS is ok
[2025-07-27 18:28:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 18:28:31] Checking for apptainer binary...
[2025-07-27 18:28:31] apptainer is not installed, using version from CVMFS
[2025-07-27 18:28:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 18:28:32] ryzen7
[2025-07-27 18:28:32] apptainer works
[2025-07-27 18:28:32] Set ATHENA_PROC_NUMBER=12
[2025-07-27 18:28:32] Set ATHENA_CORE_NUMBER=12
[2025-07-27 18:28:32] Starting ATLAS job with PandaID=6745388719
[2025-07-27 18:28:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:58:29]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:58:30] 2025-07-27 19:57:19,590 | INFO     | monitor loop #396: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:19,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:22,102 | INFO     | monitor loop #397: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:22,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:24,614 | INFO     | monitor loop #398: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:24,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:27,126 | INFO     | monitor loop #399: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:27,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:29,590 | INFO     | PID=1755901 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:58:30] 2025-07-27 19:57:29,590 | INFO     | .. there are 3 such processes running
[2025-07-27 19:58:30] 2025-07-27 19:57:29,634 | INFO     | monitor loop #400: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:29,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:32,146 | INFO     | monitor loop #401: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:32,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:34,658 | INFO     | monitor loop #402: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:34,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:37,170 | INFO     | monitor loop #403: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:37,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:39,682 | INFO     | monitor loop #404: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:39,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:42,194 | INFO     | monitor loop #405: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:42,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:44,706 | INFO     | monitor loop #406: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:44,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:47,218 | INFO     | monitor loop #407: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:47,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:49,730 | INFO     | monitor loop #408: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:49,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:51,884 | INFO     | PID=1755901 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:58:30] 2025-07-27 19:57:51,884 | INFO     | .. there are 3 such processes running
[2025-07-27 19:58:30] 2025-07-27 19:57:52,242 | INFO     | monitor loop #409: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:52,242 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:52,886 | INFO     | 5356s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 19:58:30] 2025-07-27 19:57:54,754 | INFO     | monitor loop #410: job 0:6745388719 is in state 'finished'
[2025-07-27 19:58:30] 2025-07-27 19:57:54,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 19:58:30] 2025-07-27 19:57:56,222 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 19:58:30] 2025-07-27 19:57:56,224 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4137.514125000001
[2025-07-27 19:58:30] 2025-07-27 19:57:56,230 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6745388719/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 19:58:30] 2025-07-27 19:57:56,231 | INFO     | extracted standard info from prmon json
[2025-07-27 19:58:30] 2025-07-27 19:57:56,231 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 19:58:30] 2025-07-27 19:57:56,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 19:58:30] 2025-07-27 19:57:56,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:58:30] 2025-07-27 19:57:56,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:58:30] 2025-07-27 19:57:56,232 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:58:30] 2025-07-27 19:57:56,233 | INFO     | sum of square deviations: 158737860.0
[2025-07-27 19:58:30] 2025-07-27 19:57:56,233 | INFO     | sum of deviations: -5736307752.0
[2025-07-27 19:58:30] 2025-07-27 19:57:56,233 | INFO     | mean x: 1753643651.5
[2025-07-27 19:58:30] 2025-07-27 19:57:56,233 | INFO     | mean y: 2749765.475
[2025-07-27 19:58:30] 2025-07-27 19:57:56,233 | INFO     | -- intersect: 63374145047.89241
[2025-07-27 19:58:30] 2025-07-27 19:57:56,233 | INFO     | intersect: 63374145047.89241
[2025-07-27 19:58:30] 2025-07-27 19:57:56,233 | INFO     | chi2: 0.016244831006696006
[2025-07-27 19:58:30] 2025-07-27 19:57:56,233 | INFO     | -- intersect: 63374145047.89241
[2025-07-27 19:58:30] 2025-07-27 19:57:56,233 | INFO     | current memory leak: -36.14 B/s (using 80 data points, chi2=0.02)
[2025-07-27 19:58:30] 2025-07-27 19:57:56,234 | INFO     | could have reported an average CPU frequency of 4100 MHz (6 samples)
[2025-07-27 19:58:30] 2025-07-27 19:57:56,234 | INFO     | ..............................
[2025-07-27 19:58:30] 2025-07-27 19:57:56,234 | INFO     | . Timing measurements:
[2025-07-27 19:58:30] 2025-07-27 19:57:56,234 | INFO     | . get job = 0 s
[2025-07-27 19:58:30] 2025-07-27 19:57:56,234 | INFO     | . initial setup = 1 s
[2025-07-27 19:58:30] 2025-07-27 19:57:56,234 | INFO     | . payload setup = 3 s
[2025-07-27 19:58:30] 2025-07-27 19:57:56,234 | INFO     | . stage-in = 0 s
[2025-07-27 19:58:30] 2025-07-27 19:57:56,234 | INFO     | . payload execution = 5290 s
[2025-07-27 19:58:30] 2025-07-27 19:57:56,234 | INFO     | . stage-out = 1 s
[2025-07-27 19:58:30] 2025-07-27 19:57:56,234 | INFO     | . log creation = 0 s
[2025-07-27 19:58:30] 2025-07-27 19:57:56,234 | INFO     | ..............................
[2025-07-27 19:58:30] 2025-07-27 19:57:56,366 | INFO     | 
[2025-07-27 19:58:30] 2025-07-27 19:57:56,366 | INFO     | job summary report
[2025-07-27 19:58:30] 2025-07-27 19:57:56,366 | INFO     | --------------------------------------------------
[2025-07-27 19:58:30] 2025-07-27 19:57:56,366 | INFO     | PanDA job id: 6745388719
[2025-07-27 19:58:30] 2025-07-27 19:57:56,366 | INFO     | task id: 45743349
[2025-07-27 19:58:30] 2025-07-27 19:57:56,366 | INFO     | errors: (none)
[2025-07-27 19:58:30] 2025-07-27 19:57:56,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:58:30] 2025-07-27 19:57:56,366 | INFO     | pilot state: finished 
[2025-07-27 19:58:30] 2025-07-27 19:57:56,366 | INFO     | transexitcode: 0
[2025-07-27 19:58:30] 2025-07-27 19:57:56,366 | INFO     | exeerrorcode: 0
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | exeerrordiag: 
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | exitcode: 0
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | exitmsg: OK
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | cpuconsumptiontime: 27018 s
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | nevents: 400
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | neventsw: 0
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | pid: 1763744
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | pgrp: 1763744
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | corecount: 12
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | event service: False
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | sizes: {0: 2397498, 1: 2397760, 10: 2397788, 5297: 2424393, 5299: 2433493, 5346: 2433631}
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | --------------------------------------------------
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | 
[2025-07-27 19:58:30] 2025-07-27 19:57:56,367 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-27 19:58:30] 2025-07-27 19:57:56,438 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,438 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,438 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,438 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,438 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | job 6745388719 has completed (purged errors)
[2025-07-27 19:58:30] 2025-07-27 19:57:56,439 | INFO     | overall cleanup function is called
[2025-07-27 19:58:30] 2025-07-27 19:57:57,446 | INFO     | --- collectZombieJob: --- 10, [1763744]
[2025-07-27 19:58:30] 2025-07-27 19:57:57,446 | INFO     | zombie collector waiting for pid 1763744
[2025-07-27 19:58:30] 2025-07-27 19:57:57,446 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:58:30] 2025-07-27 19:57:57,446 | INFO     | collected zombie processes
[2025-07-27 19:58:30] 2025-07-27 19:57:57,446 | INFO     | will attempt to kill all subprocesses of pid=1763744
[2025-07-27 19:58:30] 2025-07-27 19:57:57,569 | INFO     | process IDs to be killed: [1763744] (in reverse order)
[2025-07-27 19:58:30] 2025-07-27 19:57:57,646 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:58:30] 2025-07-27 19:57:57,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:58:30] 2025-07-27 19:57:57,648 | INFO     | did not find any defunct processes belonging to 1763744
[2025-07-27 19:58:30] 2025-07-27 19:57:57,650 | INFO     | did not find any defunct processes belonging to 1763744
[2025-07-27 19:58:30] 2025-07-27 19:57:57,650 | INFO     | ready for new job
[2025-07-27 19:58:30] 2025-07-27 19:57:57,650 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:58:30] 2025-07-27 19:57:57,651 | INFO     | ***************************************
[2025-07-27 19:58:30] 2025-07-27 19:57:57,651 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:58:30] 2025-07-27 19:57:57,651 | INFO     | ***************************************
[2025-07-27 19:58:30] 2025-07-27 19:57:57,651 | INFO     | 
[2025-07-27 19:58:30] 2025-07-27 19:57:57,671 | INFO     | architecture information:
[2025-07-27 19:58:30] 2025-07-27 19:57:57,674 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:58:30] 2025-07-27 19:57:57,710 | INFO     | cat /etc/os-release:
[2025-07-27 19:58:30] NAME="CentOS Linux"
[2025-07-27 19:58:30] VERSION="7 (Core)"
[2025-07-27 19:58:30] ID="centos"
[2025-07-27 19:58:30] ID_LIKE="rhel fedora"
[2025-07-27 19:58:30] VERSION_ID="7"
[2025-07-27 19:58:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:58:30] ANSI_COLOR="0;31"
[2025-07-27 19:58:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:58:30] HOME_URL="https://www.centos.org/"
[2025-07-27 19:58:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:58:30] 
[2025-07-27 19:58:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:58:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:58:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:58:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:58:30] 
[2025-07-27 19:58:30] 2025-07-27 19:57:57,710 | INFO     | ***************************************
[2025-07-27 19:58:30] 2025-07-27 19:57:58,214 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-27 19:58:30] 2025-07-27 19:57:58,258 | INFO     | sufficient remaining disk space (150061711360 B)
[2025-07-27 19:58:30] 2025-07-27 19:57:58,258 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:58:30] 2025-07-27 19:57:58,258 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:58:30] 2025-07-27 19:57:58,259 | INFO     | update_server=False
[2025-07-27 19:58:30] 2025-07-27 19:57:58,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:58:30] 2025-07-27 19:57:58,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:58:30] 2025-07-27 19:57:58,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:58:30] 2025-07-27 19:57:58,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:58:30] 2025-07-27 19:57:58,274 | INFO     | aborting loop
[2025-07-27 19:58:30] 2025-07-27 19:57:58,306 | INFO     | all data control threads have been joined
[2025-07-27 19:58:30] 2025-07-27 19:57:58,714 | INFO     | all payload control threads have been joined
[2025-07-27 19:58:30] 2025-07-27 19:57:59,162 | INFO     | all job control threads have been joined
[2025-07-27 19:58:30] 2025-07-27 19:57:59,270 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:57:59,270 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:57:59,282 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:57:59,310 | INFO     | [data] control thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:57:59,346 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:57:59,694 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:57:59,722 | INFO     | [payload] control thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:58:00,038 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:58:00,170 | INFO     | [job] control thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:58:00,234 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:58:00,262 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:58:00,270 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:58:00,284 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:58:00,290 | INFO     | [job] validate thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:58:00,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:58:30] 2025-07-27 19:58:04,750 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:58:09,262 | INFO     | job.realtimelogging is not enabled
[2025-07-27 19:58:30] 2025-07-27 19:58:10,270 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:58:30] 2025-07-27 19:58:11,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521554794304)>', '<ExcThread(monitor, started 140520978372352)>']
[2025-07-27 19:58:30] 2025-07-27 19:58:16,682 | INFO     | all workflow threads have been joined
[2025-07-27 19:58:30] 2025-07-27 19:58:16,682 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:58:30] 2025-07-27 19:58:16,682 | INFO     | traces error code: 0
[2025-07-27 19:58:30] 2025-07-27 19:58:16,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:58:30] 2025-07-27 19:58:28,125 | INFO     | PID=1755901 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 19:58:30] 2025-07-27 19:58:28,126 | INFO     | .. there are 3 such processes running
[2025-07-27 19:58:30] 2025-07-27 19:58:28,126 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:58:30] 2025-07-27 19:58:28,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:58:30] 2025-07-27 19:58:28,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:58:30] 2025-07-27 19:58:28,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:58:30] 2025-07-27 19:58:28,130 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 19:58:30] 2025-07-27 19:58:28,130 | INFO     | [monitor] control thread has ended
[2025-07-27 19:58:30] 2025-07-27 19:58:28,336 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:58:30] 2025-07-27 19:58:28,378 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:58:30] 2025-07-27 19:58:28,406 [wrapper] pilotpid: 1755901
[2025-07-27 19:58:30] 2025-07-27 19:58:28,423 [wrapper] Pilot exit status: 0
[2025-07-27 19:58:30] 2025-07-27 19:58:28,572 [wrapper] pandaids: 6745388719
[2025-07-27 19:58:30] 2025-07-27 19:58:28,954 [wrapper] cleanup supervisor_pilot 1823462 1755902
[2025-07-27 19:58:30] 2025-07-27 19:58:28,982 [wrapper] Test setup, not cleaning
[2025-07-27 19:58:30] 2025-07-27 19:58:29,006 [wrapper] apfmon messages muted
[2025-07-27 19:58:30] 2025-07-27 19:58:29,034 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:58:30] 2025-07-27 19:58:29,086 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:58:30]  *** Error codes and diagnostics ***
[2025-07-27 19:58:30]     "exeErrorCode": 0,
[2025-07-27 19:58:30]     "exeErrorDiag": "",
[2025-07-27 19:58:30]     "pilotErrorCode": 0,
[2025-07-27 19:58:30]     "pilotErrorDiag": "",
[2025-07-27 19:58:30]  *** Listing of results directory ***
[2025-07-27 19:58:30] total 345228
[2025-07-27 19:58:30] -rw-r--r-- 1 boinc boinc    530466 Jul 26 20:08 pilot3.tar.gz
[2025-07-27 19:58:30] -rwx------ 1 boinc boinc     36292 Jul 26 20:14 runpilot2-wrapper.sh
[2025-07-27 19:58:30] -rw-r--r-- 1 boinc boinc      5112 Jul 26 20:14 queuedata.json
[2025-07-27 19:58:30] -rw-rw-r-- 1 boinc boinc       100 Jul 27 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:58:30] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 18:28 run_atlas
[2025-07-27 19:58:30] -rw-rw-r-- 1 boinc boinc       105 Jul 27 18:28 job.xml
[2025-07-27 19:58:30] -rw-r--r-- 2 boinc boinc     15095 Jul 27 18:28 start_atlas.sh
[2025-07-27 19:58:30] drwxrwx--x 2 boinc boinc      4096 Jul 27 18:28 shared
[2025-07-27 19:58:30] -rw-r--r-- 2 boinc boinc    542890 Jul 27 18:28 input.tar.gz
[2025-07-27 19:58:30] -rw-rw-r-- 1 boinc boinc      9702 Jul 27 18:28 init_data.xml
[2025-07-27 19:58:30] -rw-r--r-- 2 boinc boinc 144600782 Jul 27 18:28 EVNT.45743347._002501.pool.root.1
[2025-07-27 19:58:30] -rw-rw-r-- 1 boinc boinc         0 Jul 27 18:28 boinc_lockfile
[2025-07-27 19:58:30] -rw-rw-r-- 1 boinc boinc      2563 Jul 27 18:28 pandaJob.out
[2025-07-27 19:58:30] -rw------- 1 boinc boinc    980125 Jul 27 18:28 agis_schedconf.cvmfs.json
[2025-07-27 19:58:30] -rw------- 1 boinc boinc   1593052 Jul 27 18:28 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:58:30] drwx------ 4 boinc boinc      4096 Jul 27 18:28 pilot3
[2025-07-27 19:58:30] -rw------- 1 boinc boinc 203230734 Jul 27 19:56 HITS.45743349._043748.pool.root.1
[2025-07-27 19:58:30] -rw-rw-r-- 1 boinc boinc       529 Jul 27 19:56 boinc_task_state.xml
[2025-07-27 19:58:30] -rw------- 1 boinc boinc      1022 Jul 27 19:57 memory_monitor_summary.json
[2025-07-27 19:58:30] -rw------- 1 boinc boinc    363989 Jul 27 19:57 log.45743349._043748.job.log.tgz.1
[2025-07-27 19:58:30] -rw------- 1 boinc boinc        95 Jul 27 19:57 pilot_heartbeat.json
[2025-07-27 19:58:30] -rw------- 1 boinc boinc      7738 Jul 27 19:57 heartbeat.json
[2025-07-27 19:58:30] -rw-rw-r-- 1 boinc boinc      8192 Jul 27 19:58 boinc_mmap_file
[2025-07-27 19:58:30] -rw-rw-r-- 1 boinc boinc        27 Jul 27 19:58 wrapper_checkpoint.txt
[2025-07-27 19:58:30] -rw------- 1 boinc boinc       892 Jul 27 19:58 pilotlog.txt
[2025-07-27 19:58:30] -rw------- 1 boinc boinc    539518 Jul 27 19:58 log.45743349._043748.job.log.1
[2025-07-27 19:58:30] -rw------- 1 boinc boinc       357 Jul 27 19:58 output.list
[2025-07-27 19:58:30] -rw-rw-r-- 1 boinc boinc       620 Jul 27 19:58 runtime_log
[2025-07-27 19:58:30] -rw------- 1 boinc boinc    921600 Jul 27 19:58 result.tar.gz
[2025-07-27 19:58:30] -rw-rw-r-- 1 boinc boinc      8954 Jul 27 19:58 runtime_log.err
[2025-07-27 19:58:30] -rw------- 1 boinc boinc       648 Jul 27 19:58 nCwLDmQT0z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDml0SLDmOUuJ1m.diag
[2025-07-27 19:58:30] -rw-rw-r-- 1 boinc boinc     22204 Jul 27 19:58 stderr.txt
[2025-07-27 19:58:30] HITS file was successfully produced:
[2025-07-27 19:58:30] -rw------- 1 boinc boinc 203230734 Jul 27 19:56 shared/HITS.pool.root.1
[2025-07-27 19:58:30]  *** Contents of shared directory: ***
[2025-07-27 19:58:30] total 341136
[2025-07-27 19:58:30] -rw-r--r-- 2 boinc boinc     15095 Jul 27 18:28 start_atlas.sh
[2025-07-27 19:58:30] -rw-r--r-- 2 boinc boinc    542890 Jul 27 18:28 input.tar.gz
[2025-07-27 19:58:30] -rw-r--r-- 2 boinc boinc 144600782 Jul 27 18:28 ATLAS.root_0
[2025-07-27 19:58:30] -rw------- 1 boinc boinc 203230734 Jul 27 19:56 HITS.pool.root.1
[2025-07-27 19:58:30] -rw------- 1 boinc boinc    921600 Jul 27 19:58 result.tar.gz
19:58:31 (1751420): run_atlas exited; CPU time 27036.557657
19:58:31 (1751420): called boinc_finish(0)

</stderr_txt>
]]>

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