Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:34:20 (1355868): wrapper (7.7.26015): starting
18:34:20 (1355868): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 18:34:20] Arguments: --nthreads 8
[2025-07-26 18:34:20] Threads: 8
[2025-07-26 18:34:20] Checking for CVMFS
[2025-07-26 18:34:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 18:34:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 18:34:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 18:34:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 18:34:21] 2.13.0.0 1923533 18831 299972 148792 0 404 18709826 32935936 17547 16776704 0 88635262 99.552 142196942 19393 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 18:34:21] CVMFS is ok
[2025-07-26 18:34:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 18:34:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 18:34:21] Further information can be found at the LHC@home message board.
[2025-07-26 18:34:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 18:34:21] Checking for apptainer binary...
[2025-07-26 18:34:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 18:34:21] Running /usr/bin/apptainer --version
[2025-07-26 18:34:21] apptainer version 1.4.1-1.el9
[2025-07-26 18:34:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 18:34:21] c7-3-17.aglt2.org
[2025-07-26 18:34:21] apptainer works
[2025-07-26 18:34:21] Set ATHENA_PROC_NUMBER=8
[2025-07-26 18:34:21] Set ATHENA_CORE_NUMBER=8
[2025-07-26 18:34:21] Starting ATLAS job with PandaID=6745350647
[2025-07-26 18:34:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 20:34:53]  *** The last 200 lines of the pilot log: ***
[2025-07-26 20:34:53] 2025-07-27 00:34:18,019 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745350647/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 20:34:53] 2025-07-27 00:34:18,020 | INFO     | extracted standard info from prmon json
[2025-07-26 20:34:53] 2025-07-27 00:34:18,020 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 20:34:53] 2025-07-27 00:34:18,021 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 20:34:53] 2025-07-27 00:34:18,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 20:34:53] 2025-07-27 00:34:18,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:34:53] 2025-07-27 00:34:18,026 | INFO     | fitting pss+swap vs Time
[2025-07-26 20:34:53] 2025-07-27 00:34:18,028 | INFO     | sum of square deviations: 496597218.0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,030 | INFO     | sum of deviations: -10351162041.0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,032 | INFO     | mean x: 1753572857.0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,032 | INFO     | mean y: 2248697.153846154
[2025-07-26 20:34:53] 2025-07-27 00:34:18,033 | INFO     | -- intersect: 36554037824.386375
[2025-07-26 20:34:53] 2025-07-27 00:34:18,033 | INFO     | intersect: 36554037824.386375
[2025-07-26 20:34:53] 2025-07-27 00:34:18,033 | INFO     | chi2: 1.8105895032637314
[2025-07-26 20:34:53] 2025-07-27 00:34:18,033 | INFO     | sum of square deviations: 435610028.0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,034 | INFO     | sum of deviations: -8189835203.500001
[2025-07-26 20:34:53] 2025-07-27 00:34:18,034 | INFO     | mean x: 1753572704.5
[2025-07-26 20:34:53] 2025-07-27 00:34:18,034 | INFO     | mean y: 2254053.9553571427
[2025-07-26 20:34:53] 2025-07-27 00:34:18,034 | INFO     | -- intersect: 32970896977.87538
[2025-07-26 20:34:53] 2025-07-27 00:34:18,034 | INFO     | intersect: 32970896977.87538
[2025-07-26 20:34:53] 2025-07-27 00:34:18,034 | INFO     | chi2: 1.810633201242749
[2025-07-26 20:34:53] 2025-07-27 00:34:18,034 | INFO     | current chi2=1.810633201242749 (change=-0.0024134669365386448 %)
[2025-07-26 20:34:53] 2025-07-27 00:34:18,034 | INFO     | right removable region: 111
[2025-07-26 20:34:53] 2025-07-27 00:34:18,035 | INFO     | sum of square deviations: 435610028.0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,035 | INFO     | sum of deviations: -26512963872.000008
[2025-07-26 20:34:53] 2025-07-27 00:34:18,035 | INFO     | mean x: 1753573009.5
[2025-07-26 20:34:53] 2025-07-27 00:34:18,036 | INFO     | mean y: 2288421.4464285714
[2025-07-26 20:34:53] 2025-07-27 00:34:18,036 | INFO     | -- intersect: 106731736458.3677
[2025-07-26 20:34:53] 2025-07-27 00:34:18,036 | INFO     | intersect: 106731736458.3677
[2025-07-26 20:34:53] 2025-07-27 00:34:18,036 | INFO     | chi2: 0.27050348200312485
[2025-07-26 20:34:53] 2025-07-27 00:34:18,036 | INFO     | current chi2=0.27050348200312485 (change=85.05992211290737 %)
[2025-07-26 20:34:53] 2025-07-27 00:34:18,036 | INFO     | sum of square deviations: 379832238.0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,037 | INFO     | sum of deviations: -24945753153.0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,037 | INFO     | mean x: 1753573162.0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,037 | INFO     | mean y: 2283998.6822429905
[2025-07-26 20:34:53] 2025-07-27 00:34:18,037 | INFO     | -- intersect: 115169452181.4358
[2025-07-26 20:34:53] 2025-07-27 00:34:18,037 | INFO     | intersect: 115169452181.4358
[2025-07-26 20:34:53] 2025-07-27 00:34:18,037 | INFO     | chi2: 0.24141421599528037
[2025-07-26 20:34:53] 2025-07-27 00:34:18,037 | INFO     | current chi2=0.24141421599528037 (change=10.753749191113346 %)
[2025-07-26 20:34:53] 2025-07-27 00:34:18,038 | INFO     | left removable region: 20
[2025-07-26 20:34:53] 2025-07-27 00:34:18,038 | INFO     | sum of square deviations: 233641590.0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,038 | INFO     | sum of deviations: -15230806106.0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,038 | INFO     | mean x: 1753573284.0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,038 | INFO     | mean y: 2267747.846153846
[2025-07-26 20:34:53] 2025-07-27 00:34:18,038 | INFO     | -- intersect: 114315539975.04541
[2025-07-26 20:34:53] 2025-07-27 00:34:18,038 | INFO     | intersect: 114315539975.04541
[2025-07-26 20:34:53] 2025-07-27 00:34:18,039 | INFO     | chi2: 0.22842764059660564
[2025-07-26 20:34:53] 2025-07-27 00:34:18,039 | INFO     | -- intersect: 114315539975.04541
[2025-07-26 20:34:53] 2025-07-27 00:34:18,039 | INFO     | current memory leak: -65.19 B/s (using 91 data points, chi2=0.23)
[2025-07-26 20:34:53] 2025-07-27 00:34:18,043 | INFO     | could have reported an average CPU frequency of 2948 MHz (7 samples)
[2025-07-26 20:34:53] 2025-07-27 00:34:18,043 | INFO     | ..............................
[2025-07-26 20:34:53] 2025-07-27 00:34:18,044 | INFO     | . Timing measurements:
[2025-07-26 20:34:53] 2025-07-27 00:34:18,044 | INFO     | . get job = 0 s
[2025-07-26 20:34:53] 2025-07-27 00:34:18,044 | INFO     | . initial setup = 3 s
[2025-07-26 20:34:53] 2025-07-27 00:34:18,044 | INFO     | . payload setup = 11 s
[2025-07-26 20:34:53] 2025-07-27 00:34:18,044 | INFO     | . stage-in = 0 s
[2025-07-26 20:34:53] 2025-07-27 00:34:18,044 | INFO     | . payload execution = 7129 s
[2025-07-26 20:34:53] 2025-07-27 00:34:18,044 | INFO     | . stage-out = 1 s
[2025-07-26 20:34:53] 2025-07-27 00:34:18,044 | INFO     | . log creation = 0 s
[2025-07-26 20:34:53] 2025-07-27 00:34:18,044 | INFO     | ..............................
[2025-07-26 20:34:53] 2025-07-27 00:34:18,165 | INFO     | 
[2025-07-26 20:34:53] 2025-07-27 00:34:18,165 | INFO     | job summary report
[2025-07-26 20:34:53] 2025-07-27 00:34:18,165 | INFO     | --------------------------------------------------
[2025-07-26 20:34:53] 2025-07-27 00:34:18,165 | INFO     | PanDA job id: 6745350647
[2025-07-26 20:34:53] 2025-07-27 00:34:18,166 | INFO     | task id: 45743349
[2025-07-26 20:34:53] 2025-07-27 00:34:18,166 | INFO     | errors: (none)
[2025-07-26 20:34:53] 2025-07-27 00:34:18,166 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 20:34:53] 2025-07-27 00:34:18,166 | INFO     | pilot state: finished 
[2025-07-26 20:34:53] 2025-07-27 00:34:18,166 | INFO     | transexitcode: 0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,166 | INFO     | exeerrorcode: 0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,166 | INFO     | exeerrordiag: 
[2025-07-26 20:34:53] 2025-07-27 00:34:18,171 | INFO     | exitcode: 0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,171 | INFO     | exitmsg: OK
[2025-07-26 20:34:53] 2025-07-27 00:34:18,171 | INFO     | cpuconsumptiontime: 39399 s
[2025-07-26 20:34:53] 2025-07-27 00:34:18,171 | INFO     | nevents: 400
[2025-07-26 20:34:53] 2025-07-27 00:34:18,172 | INFO     | neventsw: 0
[2025-07-26 20:34:53] 2025-07-27 00:34:18,172 | INFO     | pid: 1367732
[2025-07-26 20:34:53] 2025-07-27 00:34:18,172 | INFO     | pgrp: 1367732
[2025-07-26 20:34:53] 2025-07-27 00:34:18,172 | INFO     | corecount: 8
[2025-07-26 20:34:53] 2025-07-27 00:34:18,172 | INFO     | event service: False
[2025-07-26 20:34:53] 2025-07-27 00:34:18,172 | INFO     | sizes: {0: 2397475, 8: 2397737, 11: 2397765, 7145: 2424965, 7147: 2433991, 7150: 2434047, 7159: 2434369}
[2025-07-26 20:34:53] 2025-07-27 00:34:18,172 | INFO     | --------------------------------------------------
[2025-07-26 20:34:53] 2025-07-27 00:34:18,172 | INFO     | 
[2025-07-26 20:34:53] 2025-07-27 00:34:18,172 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 20:34:53] 2025-07-27 00:34:18,217 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,218 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,218 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,218 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,219 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 20:34:53] 2025-07-27 00:34:18,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,219 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 20:34:53] 2025-07-27 00:34:18,220 | INFO     | job 6745350647 has completed (purged errors)
[2025-07-26 20:34:53] 2025-07-27 00:34:18,220 | INFO     | overall cleanup function is called
[2025-07-26 20:34:53] 2025-07-27 00:34:19,232 | INFO     | --- collectZombieJob: --- 10, [1367732]
[2025-07-26 20:34:53] 2025-07-27 00:34:19,236 | INFO     | zombie collector waiting for pid 1367732
[2025-07-26 20:34:53] 2025-07-27 00:34:19,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 20:34:53] 2025-07-27 00:34:19,239 | INFO     | collected zombie processes
[2025-07-26 20:34:53] 2025-07-27 00:34:19,242 | INFO     | will attempt to kill all subprocesses of pid=1367732
[2025-07-26 20:34:53] 2025-07-27 00:34:19,861 | INFO     | PID=1359479 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 20:34:53] 2025-07-27 00:34:19,863 | INFO     | .. there are 19 such processes running
[2025-07-26 20:34:53] 2025-07-27 00:34:20,106 | INFO     | process IDs to be killed: [1367732] (in reverse order)
[2025-07-26 20:34:53] 2025-07-27 00:34:20,283 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 20:34:53] 2025-07-27 00:34:20,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 20:34:53] 2025-07-27 00:34:20,302 | INFO     | did not find any defunct processes belonging to 1367732
[2025-07-26 20:34:53] 2025-07-27 00:34:20,320 | INFO     | did not find any defunct processes belonging to 1367732
[2025-07-26 20:34:53] 2025-07-27 00:34:20,320 | INFO     | ready for new job
[2025-07-26 20:34:53] 2025-07-27 00:34:20,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 20:34:53] 2025-07-27 00:34:20,323 | INFO     | ***************************************
[2025-07-26 20:34:53] 2025-07-27 00:34:20,323 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 20:34:53] 2025-07-27 00:34:20,323 | INFO     | ***************************************
[2025-07-26 20:34:53] 2025-07-27 00:34:20,323 | INFO     | 
[2025-07-26 20:34:53] 2025-07-27 00:34:20,346 | INFO     | architecture information:
[2025-07-26 20:34:53] 2025-07-27 00:34:20,348 | INFO     | executing command: cat /etc/os-release
[2025-07-26 20:34:53] 2025-07-27 00:34:20,376 | INFO     | cat /etc/os-release:
[2025-07-26 20:34:53] NAME="CentOS Linux"
[2025-07-26 20:34:53] VERSION="7 (Core)"
[2025-07-26 20:34:53] ID="centos"
[2025-07-26 20:34:53] ID_LIKE="rhel fedora"
[2025-07-26 20:34:53] VERSION_ID="7"
[2025-07-26 20:34:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 20:34:53] ANSI_COLOR="0;31"
[2025-07-26 20:34:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 20:34:53] HOME_URL="https://www.centos.org/"
[2025-07-26 20:34:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 20:34:53] 
[2025-07-26 20:34:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 20:34:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 20:34:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 20:34:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 20:34:53] 
[2025-07-26 20:34:53] 2025-07-27 00:34:20,377 | INFO     | ***************************************
[2025-07-26 20:34:53] 2025-07-27 00:34:20,880 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 20:34:53] 2025-07-27 00:34:20,936 | INFO     | sufficient remaining disk space (75958845440 B)
[2025-07-26 20:34:53] 2025-07-27 00:34:20,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 20:34:53] 2025-07-27 00:34:20,936 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 20:34:53] 2025-07-27 00:34:20,936 | INFO     | update_server=False
[2025-07-26 20:34:53] 2025-07-27 00:34:20,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 20:34:53] 2025-07-27 00:34:21,004 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 20:34:53] 2025-07-27 00:34:21,005 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 20:34:53] 2025-07-27 00:34:21,005 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:34:53] 2025-07-27 00:34:21,005 | INFO     | will abort loop
[2025-07-26 20:34:53] 2025-07-27 00:34:21,221 | INFO     | all job control threads have been joined
[2025-07-26 20:34:53] 2025-07-27 00:34:21,297 | INFO     | all data control threads have been joined
[2025-07-26 20:34:53] 2025-07-27 00:34:21,442 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 20:34:53] 2025-07-27 00:34:21,942 | INFO     | [job] retrieve thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:22,019 | INFO     | [job] job monitor thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:22,184 | INFO     | all payload control threads have been joined
[2025-07-26 20:34:53] 2025-07-27 00:34:22,227 | INFO     | [job] control thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:22,304 | INFO     | [data] control thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:22,448 | INFO     | [job] validate thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:22,491 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:22,799 | INFO     | [data] copytool_in thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:22,845 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:22,865 | INFO     | [payload] failed_post thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:22,933 | INFO     | [payload] validate_post thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:23,180 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:23,187 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:34:53] 2025-07-27 00:34:23,190 | INFO     | [payload] control thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:23,449 | INFO     | [data] copytool_out thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:24,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 20:34:53] 2025-07-27 00:34:24,193 | INFO     | [job] queue monitor thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:28,060 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:31,665 | INFO     | job.realtimelogging is not enabled
[2025-07-26 20:34:53] 2025-07-27 00:34:32,677 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 20:34:53] 2025-07-27 00:34:34,476 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375266817856)>', '<ExcThread(monitor, started 140374924306176)>']
[2025-07-26 20:34:53] 2025-07-27 00:34:35,526 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-07-26 20:34:53] 2025-07-27 00:34:39,505 | INFO     | all workflow threads have been joined
[2025-07-26 20:34:53] 2025-07-27 00:34:39,506 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 20:34:53] 2025-07-27 00:34:39,506 | INFO     | traces error code: 0
[2025-07-26 20:34:53] 2025-07-27 00:34:39,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 20:34:53] 2025-07-27 00:34:53,091 | INFO     | PID=1359479 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 20:34:53] 2025-07-27 00:34:53,092 | INFO     | .. there are 19 such processes running
[2025-07-26 20:34:53] 2025-07-27 00:34:53,092 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 20:34:53] 2025-07-27 00:34:53,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 20:34:53] 2025-07-27 00:34:53,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 20:34:53] 2025-07-27 00:34:53,092 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 20:34:53] 2025-07-27 00:34:53,092 | INFO     | [monitor] control thread has ended
[2025-07-26 20:34:53] 2025-07-27 00:34:53,232 [wrapper] ==== pilot stdout END ====
[2025-07-26 20:34:53] 2025-07-27 00:34:53,238 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 20:34:53] 2025-07-27 00:34:53,247 [wrapper] pilotpid: 1359479
[2025-07-26 20:34:53] 2025-07-27 00:34:53,252 [wrapper] Pilot exit status: 0
[2025-07-26 20:34:53] 2025-07-27 00:34:53,276 [wrapper] pandaids: 6745350647
[2025-07-26 20:34:53] 2025-07-27 00:34:53,390 [wrapper] cleanup supervisor_pilot 1796011 1359480
[2025-07-26 20:34:53] 2025-07-27 00:34:53,393 [wrapper] Test setup, not cleaning
[2025-07-26 20:34:53] 2025-07-27 00:34:53,395 [wrapper] apfmon messages muted
[2025-07-26 20:34:53] 2025-07-27 00:34:53,400 [wrapper] ==== wrapper stdout END ====
[2025-07-26 20:34:53] 2025-07-27 00:34:53,405 [wrapper] ==== wrapper stderr END ====
[2025-07-26 20:34:53]  *** Error codes and diagnostics ***
[2025-07-26 20:34:53]     "exeErrorCode": 0,
[2025-07-26 20:34:53]     "exeErrorDiag": "",
[2025-07-26 20:34:53]     "pilotErrorCode": 0,
[2025-07-26 20:34:53]     "pilotErrorDiag": "",
[2025-07-26 20:34:53]  *** Listing of results directory ***
[2025-07-26 20:34:53] total 394756
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 13:17 pilot3.tar.gz
[2025-07-26 20:34:53] -rwx------. 1 boincer umatlas     36292 Jul 26 13:29 runpilot2-wrapper.sh
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 13:29 queuedata.json
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas       100 Jul 26 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 20:34:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 18:34 run_atlas
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas       105 Jul 26 18:34 job.xml
[2025-07-26 20:34:53] -rw-r--r--. 2 boincer umatlas 190537805 Jul 26 18:34 EVNT.45743347._002347.pool.root.1
[2025-07-26 20:34:53] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 18:34 shared
[2025-07-26 20:34:53] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 18:34 input.tar.gz
[2025-07-26 20:34:53] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 18:34 start_atlas.sh
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas         0 Jul 26 18:34 boinc_lockfile
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 18:34 pandaJob.out
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas    980125 Jul 26 18:34 agis_schedconf.cvmfs.json
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas   1593052 Jul 26 18:34 agis_ddmendpoints.agis.ALL.json
[2025-07-26 20:34:53] drwx------. 4 boincer umatlas      4096 Jul 26 18:34 pilot3
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas      6931 Jul 26 20:28 init_data.xml
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas       530 Jul 26 20:33 boinc_task_state.xml
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas 207830505 Jul 26 20:33 HITS.45743349._041565.pool.root.1
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas        95 Jul 26 20:33 pilot_heartbeat.json
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas      1038 Jul 26 20:34 memory_monitor_summary.json
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas    329810 Jul 26 20:34 log.45743349._041565.job.log.tgz.1
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas      7789 Jul 26 20:34 heartbeat.json
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 20:34 boinc_mmap_file
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas        27 Jul 26 20:34 wrapper_checkpoint.txt
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas       823 Jul 26 20:34 pilotlog.txt
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas    673527 Jul 26 20:34 log.45743349._041565.job.log.1
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas       357 Jul 26 20:34 output.list
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas       620 Jul 26 20:34 runtime_log
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas   1024000 Jul 26 20:34 result.tar.gz
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 20:34 runtime_log.err
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas       654 Jul 26 20:34 E8NNDmqsxz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmm80KDm0TD4Gn.diag
[2025-07-26 20:34:53] -rw-r--r--. 1 boincer umatlas      2144 Jul 26 20:34 stderr.txt
[2025-07-26 20:34:53] HITS file was successfully produced:
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas 207830505 Jul 26 20:33 shared/HITS.pool.root.1
[2025-07-26 20:34:53]  *** Contents of shared directory: ***
[2025-07-26 20:34:53] total 390588
[2025-07-26 20:34:53] -rw-r--r--. 2 boincer umatlas 190537805 Jul 26 18:34 ATLAS.root_0
[2025-07-26 20:34:53] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 18:34 input.tar.gz
[2025-07-26 20:34:53] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 18:34 start_atlas.sh
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas 207830505 Jul 26 20:33 HITS.pool.root.1
[2025-07-26 20:34:53] -rw-------. 1 boincer umatlas   1024000 Jul 26 20:34 result.tar.gz
20:34:55 (1355868): run_atlas exited; CPU time 39671.439542
20:34:55 (1355868): called boinc_finish(0)

</stderr_txt>
]]>

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