Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:42:49 (3451114): wrapper (7.7.26015): starting
14:42:49 (3451114): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 14:42:49] Arguments: --nthreads 4
[2025-07-28 14:42:49] Threads: 4
[2025-07-28 14:42:49] Checking for CVMFS
[2025-07-28 14:42:49] No cvmfs_config command found, will try listing directly
[2025-07-28 14:42:49] CVMFS is ok
[2025-07-28 14:42:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 14:42:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 14:42:49] Further information can be found at the LHC@home message board.
[2025-07-28 14:42:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 14:42:49] Checking for apptainer binary...
[2025-07-28 14:42:49] which: no apptainer in ((null))
[2025-07-28 14:42:49] apptainer is not installed, using version from CVMFS
[2025-07-28 14:42:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 14:42:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-07-28 14:42:49] apptainer works
[2025-07-28 14:42:49] Set ATHENA_PROC_NUMBER=4
[2025-07-28 14:42:49] Set ATHENA_CORE_NUMBER=4
[2025-07-28 14:42:49] Starting ATLAS job with PandaID=6745350549
[2025-07-28 14:42:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 17:31:09]  *** The last 200 lines of the pilot log: ***
[2025-07-28 17:31:09] 2025-07-28 15:30:32,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:31:09] 2025-07-28 15:30:35,390 | INFO     | monitor loop #706: job 0:6745350549 is in state 'finished'
[2025-07-28 17:31:09] 2025-07-28 15:30:35,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 17:31:09] 2025-07-28 15:30:35,817 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 17:31:09] 2025-07-28 15:30:35,834 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3162.0920859375
[2025-07-28 17:31:09] 2025-07-28 15:30:35,854 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6745350549/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 17:31:09] 2025-07-28 15:30:35,854 | INFO     | extracted standard info from prmon json
[2025-07-28 17:31:09] 2025-07-28 15:30:35,854 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 17:31:09] 2025-07-28 15:30:35,855 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 17:31:09] 2025-07-28 15:30:35,855 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 17:31:09] 2025-07-28 15:30:35,855 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 17:31:09] 2025-07-28 15:30:35,857 | INFO     | fitting pss+swap vs Time
[2025-07-28 17:31:09] 2025-07-28 15:30:35,858 | INFO     | sum of square deviations: 1367709365.0
[2025-07-28 17:31:09] 2025-07-28 15:30:35,859 | INFO     | sum of deviations: 23676933419.5
[2025-07-28 17:31:09] 2025-07-28 15:30:35,859 | INFO     | mean x: 1753711618.5
[2025-07-28 17:31:09] 2025-07-28 15:30:35,859 | INFO     | mean y: 2314231.4817073173
[2025-07-28 17:31:09] 2025-07-28 15:30:35,859 | INFO     | -- intersect: -30356849996.53254
[2025-07-28 17:31:09] 2025-07-28 15:30:35,859 | INFO     | intersect: -30356849996.53254
[2025-07-28 17:31:09] 2025-07-28 15:30:35,859 | INFO     | chi2: 1.5352803273633815
[2025-07-28 17:31:09] 2025-07-28 15:30:35,859 | INFO     | sum of square deviations: 1246386160.0
[2025-07-28 17:31:09] 2025-07-28 15:30:35,860 | INFO     | sum of deviations: 22858767899.999996
[2025-07-28 17:31:09] 2025-07-28 15:30:35,860 | INFO     | mean x: 1753711466.0
[2025-07-28 17:31:09] 2025-07-28 15:30:35,860 | INFO     | mean y: 2313202.823899371
[2025-07-28 17:31:09] 2025-07-28 15:30:35,860 | INFO     | -- intersect: -32160819421.22797
[2025-07-28 17:31:09] 2025-07-28 15:30:35,860 | INFO     | intersect: -32160819421.22797
[2025-07-28 17:31:09] 2025-07-28 15:30:35,861 | INFO     | chi2: 1.536647547588713
[2025-07-28 17:31:09] 2025-07-28 15:30:35,861 | INFO     | current chi2=1.536647547588713 (change=-0.0890534582488543 %)
[2025-07-28 17:31:09] 2025-07-28 15:30:35,861 | INFO     | right removable region: 158
[2025-07-28 17:31:09] 2025-07-28 15:30:35,861 | INFO     | sum of square deviations: 1246386160.0
[2025-07-28 17:31:09] 2025-07-28 15:30:35,862 | INFO     | sum of deviations: -735946212.0
[2025-07-28 17:31:09] 2025-07-28 15:30:35,862 | INFO     | mean x: 1753711771.0
[2025-07-28 17:31:09] 2025-07-28 15:30:35,862 | INFO     | mean y: 2344510.3584905663
[2025-07-28 17:31:09] 2025-07-28 15:30:35,862 | INFO     | -- intersect: 1037848254.0836787
[2025-07-28 17:31:09] 2025-07-28 15:30:35,862 | INFO     | intersect: 1037848254.0836787
[2025-07-28 17:31:09] 2025-07-28 15:30:35,862 | INFO     | chi2: 0.004220781222159106
[2025-07-28 17:31:09] 2025-07-28 15:30:35,862 | INFO     | current chi2=0.004220781222159106 (change=99.7250807460415 %)
[2025-07-28 17:31:09] 2025-07-28 15:30:35,863 | INFO     | sum of square deviations: 1132458442.5
[2025-07-28 17:31:09] 2025-07-28 15:30:35,863 | INFO     | sum of deviations: -690707087.0000001
[2025-07-28 17:31:09] 2025-07-28 15:30:35,863 | INFO     | mean x: 1753711923.5
[2025-07-28 17:31:09] 2025-07-28 15:30:35,863 | INFO     | mean y: 2344444.038961039
[2025-07-28 17:31:09] 2025-07-28 15:30:35,864 | INFO     | -- intersect: 1071965375.508905
[2025-07-28 17:31:09] 2025-07-28 15:30:35,864 | INFO     | intersect: 1071965375.508905
[2025-07-28 17:31:09] 2025-07-28 15:30:35,864 | INFO     | chi2: 0.004104473440097533
[2025-07-28 17:31:09] 2025-07-28 15:30:35,864 | INFO     | current chi2=0.004104473440097533 (change=2.7555984529820456 %)
[2025-07-28 17:31:09] 2025-07-28 15:30:35,864 | INFO     | left removable region: 20
[2025-07-28 17:31:09] 2025-07-28 15:30:35,864 | INFO     | sum of square deviations: 814878534.5
[2025-07-28 17:31:09] 2025-07-28 15:30:35,865 | INFO     | sum of deviations: 210634738.4999998
[2025-07-28 17:31:09] 2025-07-28 15:30:35,865 | INFO     | mean x: 1753712045.5
[2025-07-28 17:31:09] 2025-07-28 15:30:35,865 | INFO     | mean y: 2342760.586956522
[2025-07-28 17:31:09] 2025-07-28 15:30:35,865 | INFO     | -- intersect: -450967349.4098019
[2025-07-28 17:31:09] 2025-07-28 15:30:35,865 | INFO     | intersect: -450967349.4098019
[2025-07-28 17:31:09] 2025-07-28 15:30:35,865 | INFO     | chi2: 0.003135052059741309
[2025-07-28 17:31:09] 2025-07-28 15:30:35,865 | INFO     | -- intersect: -450967349.4098019
[2025-07-28 17:31:09] 2025-07-28 15:30:35,865 | INFO     | current memory leak: 0.26 B/s (using 138 data points, chi2=0.00)
[2025-07-28 17:31:09] 2025-07-28 15:30:35,866 | INFO     | could have reported an average CPU frequency of 3147 MHz (9 samples)
[2025-07-28 17:31:09] 2025-07-28 15:30:35,866 | INFO     | ..............................
[2025-07-28 17:31:09] 2025-07-28 15:30:35,866 | INFO     | . Timing measurements:
[2025-07-28 17:31:09] 2025-07-28 15:30:35,866 | INFO     | . get job = 0 s
[2025-07-28 17:31:09] 2025-07-28 15:30:35,866 | INFO     | . initial setup = 1 s
[2025-07-28 17:31:09] 2025-07-28 15:30:35,866 | INFO     | . payload setup = 13 s
[2025-07-28 17:31:09] 2025-07-28 15:30:35,866 | INFO     | . stage-in = 0 s
[2025-07-28 17:31:09] 2025-07-28 15:30:35,866 | INFO     | . payload execution = 9988 s
[2025-07-28 17:31:09] 2025-07-28 15:30:35,866 | INFO     | . stage-out = 0 s
[2025-07-28 17:31:09] 2025-07-28 15:30:35,866 | INFO     | . log creation = 0 s
[2025-07-28 17:31:09] 2025-07-28 15:30:35,866 | INFO     | ..............................
[2025-07-28 17:31:09] 2025-07-28 15:30:36,049 | INFO     | 
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | job summary report
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | --------------------------------------------------
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | PanDA job id: 6745350549
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | task id: 45743349
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | errors: (none)
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | pilot state: finished 
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | transexitcode: 0
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | exeerrorcode: 0
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | exeerrordiag: 
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | exitcode: 0
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | exitmsg: OK
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | cpuconsumptiontime: 38006 s
[2025-07-28 17:31:09] 2025-07-28 15:30:36,050 | INFO     | nevents: 400
[2025-07-28 17:31:09] 2025-07-28 15:30:36,051 | INFO     | neventsw: 0
[2025-07-28 17:31:09] 2025-07-28 15:30:36,051 | INFO     | pid: 3462832
[2025-07-28 17:31:09] 2025-07-28 15:30:36,051 | INFO     | pgrp: 3462832
[2025-07-28 17:31:09] 2025-07-28 15:30:36,051 | INFO     | corecount: 4
[2025-07-28 17:31:09] 2025-07-28 15:30:36,051 | INFO     | event service: False
[2025-07-28 17:31:09] 2025-07-28 15:30:36,051 | INFO     | sizes: {0: 2397486, 11: 2397486, 12: 2397776, 22: 2397804, 10006: 2435739, 10008: 2435739, 10014: 2436125}
[2025-07-28 17:31:09] 2025-07-28 15:30:36,051 | INFO     | --------------------------------------------------
[2025-07-28 17:31:09] 2025-07-28 15:30:36,051 | INFO     | 
[2025-07-28 17:31:09] 2025-07-28 15:30:36,051 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-07-28 17:31:09] 2025-07-28 15:30:36,075 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,075 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,075 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,075 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | job 6745350549 has completed (purged errors)
[2025-07-28 17:31:09] 2025-07-28 15:30:36,076 | INFO     | overall cleanup function is called
[2025-07-28 17:31:09] 2025-07-28 15:30:37,084 | INFO     | --- collectZombieJob: --- 10, [3462832]
[2025-07-28 17:31:09] 2025-07-28 15:30:37,085 | INFO     | zombie collector waiting for pid 3462832
[2025-07-28 17:31:09] 2025-07-28 15:30:37,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 17:31:09] 2025-07-28 15:30:37,085 | INFO     | collected zombie processes
[2025-07-28 17:31:09] 2025-07-28 15:30:37,085 | INFO     | will attempt to kill all subprocesses of pid=3462832
[2025-07-28 17:31:09] 2025-07-28 15:30:37,662 | INFO     | process IDs to be killed: [3462832] (in reverse order)
[2025-07-28 17:31:09] 2025-07-28 15:30:37,858 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 17:31:09] 2025-07-28 15:30:37,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 17:31:09] 2025-07-28 15:30:37,882 | INFO     | did not find any defunct processes belonging to 3462832
[2025-07-28 17:31:09] 2025-07-28 15:30:37,901 | INFO     | did not find any defunct processes belonging to 3462832
[2025-07-28 17:31:09] 2025-07-28 15:30:37,901 | INFO     | ready for new job
[2025-07-28 17:31:09] 2025-07-28 15:30:37,901 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 17:31:09] 2025-07-28 15:30:37,903 | INFO     | ***************************************
[2025-07-28 17:31:09] 2025-07-28 15:30:37,903 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 17:31:09] 2025-07-28 15:30:37,903 | INFO     | ***************************************
[2025-07-28 17:31:09] 2025-07-28 15:30:37,903 | INFO     | 
[2025-07-28 17:31:09] 2025-07-28 15:30:37,910 | INFO     | architecture information:
[2025-07-28 17:31:09] 2025-07-28 15:30:37,911 | INFO     | executing command: cat /etc/os-release
[2025-07-28 17:31:09] 2025-07-28 15:30:37,930 | INFO     | cat /etc/os-release:
[2025-07-28 17:31:09] NAME="CentOS Linux"
[2025-07-28 17:31:09] VERSION="7 (Core)"
[2025-07-28 17:31:09] ID="centos"
[2025-07-28 17:31:09] ID_LIKE="rhel fedora"
[2025-07-28 17:31:09] VERSION_ID="7"
[2025-07-28 17:31:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 17:31:09] ANSI_COLOR="0;31"
[2025-07-28 17:31:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 17:31:09] HOME_URL="https://www.centos.org/"
[2025-07-28 17:31:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 17:31:09] 
[2025-07-28 17:31:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 17:31:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 17:31:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 17:31:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 17:31:09] 
[2025-07-28 17:31:09] 2025-07-28 15:30:37,930 | INFO     | ***************************************
[2025-07-28 17:31:09] 2025-07-28 15:30:38,432 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-07-28 17:31:09] 2025-07-28 15:30:38,458 | INFO     | sufficient remaining disk space (3261397467136 B)
[2025-07-28 17:31:09] 2025-07-28 15:30:38,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 17:31:09] 2025-07-28 15:30:38,459 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 17:31:09] 2025-07-28 15:30:38,459 | INFO     | update_server=False
[2025-07-28 17:31:09] 2025-07-28 15:30:38,459 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 17:31:09] 2025-07-28 15:30:38,678 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 17:31:09] 2025-07-28 15:30:38,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:31:09] 2025-07-28 15:30:38,898 | INFO     | aborting loop
[2025-07-28 17:31:09] 2025-07-28 15:30:38,928 | INFO     | all payload control threads have been joined
[2025-07-28 17:31:09] 2025-07-28 15:30:39,004 | INFO     | all data control threads have been joined
[2025-07-28 17:31:09] 2025-07-28 15:30:39,444 | INFO     | all job control threads have been joined
[2025-07-28 17:31:09] 2025-07-28 15:30:39,464 | INFO     | [job] retrieve thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:39,659 | INFO     | [payload] validate_post thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:39,841 | INFO     | [data] copytool_in thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:39,903 | INFO     | [job] job monitor thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:39,934 | INFO     | [payload] control thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:40,010 | INFO     | [data] control thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:40,073 | INFO     | [job] validate thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:40,104 | INFO     | [payload] failed_post thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:40,307 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:40,354 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:40,444 | INFO     | [job] control thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:40,512 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:40,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 17:31:09] 2025-07-28 15:30:40,683 | INFO     | [data] copytool_out thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:40,707 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:40,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:31:09] 2025-07-28 15:30:41,956 | INFO     | [job] queue monitor thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:44,568 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 17:31:09] 2025-07-28 15:30:45,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22737473283904)>', '<ExcThread(monitor, started 22737231767296)>']
[2025-07-28 17:31:09] 2025-07-28 15:30:50,867 | INFO     | all workflow threads have been joined
[2025-07-28 17:31:09] 2025-07-28 15:30:50,868 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 17:31:09] 2025-07-28 15:30:50,868 | INFO     | traces error code: 0
[2025-07-28 17:31:09] 2025-07-28 15:30:50,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 17:31:09] 2025-07-28 15:31:08,961 | INFO     | PID=3455044 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 17:31:09] 2025-07-28 15:31:08,964 | INFO     | .. there are 11 such processes running
[2025-07-28 17:31:09] 2025-07-28 15:31:08,964 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 17:31:09] 2025-07-28 15:31:08,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 17:31:09] 2025-07-28 15:31:08,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 17:31:09] 2025-07-28 15:31:08,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 17:31:09] 2025-07-28 15:31:08,964 | CRITICAL | thread 'MainThread' is not alive
[2025-07-28 17:31:09] 2025-07-28 15:31:08,964 | INFO     | [monitor] control thread has ended
[2025-07-28 17:31:09] 2025-07-28 15:31:09,074 [wrapper] ==== pilot stdout END ====
[2025-07-28 17:31:09] 2025-07-28 15:31:09,077 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 17:31:09] 2025-07-28 15:31:09,080 [wrapper] pilotpid: 3455044
[2025-07-28 17:31:09] 2025-07-28 15:31:09,083 [wrapper] Pilot exit status: 0
[2025-07-28 17:31:09] 2025-07-28 15:31:09,095 [wrapper] pandaids: 6745350549
[2025-07-28 17:31:09] 2025-07-28 15:31:09,220 [wrapper] cleanup supervisor_pilot 4131376 3455045
[2025-07-28 17:31:09] 2025-07-28 15:31:09,224 [wrapper] Test setup, not cleaning
[2025-07-28 17:31:09] 2025-07-28 15:31:09,227 [wrapper] apfmon messages muted
[2025-07-28 17:31:09] 2025-07-28 15:31:09,230 [wrapper] ==== wrapper stdout END ====
[2025-07-28 17:31:09] 2025-07-28 15:31:09,233 [wrapper] ==== wrapper stderr END ====
[2025-07-28 17:31:09]  *** Error codes and diagnostics ***
[2025-07-28 17:31:09]     "exeErrorCode": 0,
[2025-07-28 17:31:09]     "exeErrorDiag": "",
[2025-07-28 17:31:09]     "pilotErrorCode": 0,
[2025-07-28 17:31:09]     "pilotErrorDiag": "",
[2025-07-28 17:31:09]  *** Listing of results directory ***
[2025-07-28 17:31:09] total 355840
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc    530466 Jul 26 19:01 pilot3.tar.gz
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc      5112 Jul 26 19:15 queuedata.json
[2025-07-28 17:31:09] -rwx------ 1 boinc boinc     36292 Jul 26 19:16 runpilot2-wrapper.sh
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc       100 Jul 28 14:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 17:31:09] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 14:42 run_atlas
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc       105 Jul 28 14:42 job.xml
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc      6685 Jul 28 14:42 init_data.xml
[2025-07-28 17:31:09] -rw-r--r-- 2 boinc boinc 144810739 Jul 28 14:42 EVNT.45743347._002461.pool.root.1
[2025-07-28 17:31:09] -rw-r--r-- 2 boinc boinc     15095 Jul 28 14:42 start_atlas.sh
[2025-07-28 17:31:09] drwxrwx--x 2 boinc boinc      4096 Jul 28 14:42 shared
[2025-07-28 17:31:09] -rw-r--r-- 2 boinc boinc    542892 Jul 28 14:42 input.tar.gz
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc         0 Jul 28 14:42 boinc_lockfile
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc      2562 Jul 28 14:42 pandaJob.out
[2025-07-28 17:31:09] -rw------- 1 boinc boinc    977006 Jul 28 14:43 agis_schedconf.cvmfs.json
[2025-07-28 17:31:09] -rw------- 1 boinc boinc   1593052 Jul 28 14:43 agis_ddmendpoints.agis.ALL.json
[2025-07-28 17:31:09] drwx------ 4 boinc boinc      4096 Jul 28 14:43 pilot3
[2025-07-28 17:31:09] -rw------- 1 boinc boinc 213242594 Jul 28 17:29 HITS.45743349._041467.pool.root.1
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc       529 Jul 28 17:30 boinc_task_state.xml
[2025-07-28 17:31:09] -rw------- 1 boinc boinc      1032 Jul 28 17:30 memory_monitor_summary.json
[2025-07-28 17:31:09] -rw------- 1 boinc boinc    288636 Jul 28 17:30 log.45743349._041467.job.log.tgz.1
[2025-07-28 17:31:09] -rw------- 1 boinc boinc      7783 Jul 28 17:30 heartbeat.json
[2025-07-28 17:31:09] -rw------- 1 boinc boinc        95 Jul 28 17:30 pilot_heartbeat.json
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc      8192 Jul 28 17:30 boinc_mmap_file
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc        27 Jul 28 17:30 wrapper_checkpoint.txt
[2025-07-28 17:31:09] -rw------- 1 boinc boinc       893 Jul 28 17:31 pilotlog.txt
[2025-07-28 17:31:09] -rw------- 1 boinc boinc    936511 Jul 28 17:31 log.45743349._041467.job.log.1
[2025-07-28 17:31:09] -rw------- 1 boinc boinc       357 Jul 28 17:31 output.list
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc       620 Jul 28 17:31 runtime_log
[2025-07-28 17:31:09] -rw------- 1 boinc boinc   1249280 Jul 28 17:31 result.tar.gz
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc      9042 Jul 28 17:31 runtime_log.err
[2025-07-28 17:31:09] -rw------- 1 boinc boinc       665 Jul 28 17:31 rY7NDmvgxz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7gSLDmPWXdnm.diag
[2025-07-28 17:31:09] -rw-r--r-- 1 boinc boinc     20733 Jul 28 17:31 stderr.txt
[2025-07-28 17:31:09] HITS file was successfully produced:
[2025-07-28 17:31:09] -rw------- 1 boinc boinc 213242594 Jul 28 17:29 shared/HITS.pool.root.1
[2025-07-28 17:31:09]  *** Contents of shared directory: ***
[2025-07-28 17:31:09] total 351440
[2025-07-28 17:31:09] -rw-r--r-- 2 boinc boinc 144810739 Jul 28 14:42 ATLAS.root_0
[2025-07-28 17:31:09] -rw-r--r-- 2 boinc boinc     15095 Jul 28 14:42 start_atlas.sh
[2025-07-28 17:31:09] -rw-r--r-- 2 boinc boinc    542892 Jul 28 14:42 input.tar.gz
[2025-07-28 17:31:09] -rw------- 1 boinc boinc 213242594 Jul 28 17:29 HITS.pool.root.1
[2025-07-28 17:31:09] -rw------- 1 boinc boinc   1249280 Jul 28 17:31 result.tar.gz
17:31:10 (3451114): run_atlas exited; CPU time 38501.335403
17:31:10 (3451114): called boinc_finish(0)

</stderr_txt>
]]>

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