Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:24:17 (1718375): wrapper (7.7.26015): starting
18:24:17 (1718375): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 18:24:17] Arguments: --nthreads 8
[2025-07-26 18:24:17] Threads: 8
[2025-07-26 18:24:17] Checking for CVMFS
[2025-07-26 18:24:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 18:24:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 18:24:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 18:24:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 18:24:19] 2.13.0.0 1041320 17519 177400 148792 0 66 23299382 32503809 28819 16776704 1 178789099 99.566 221002609 30178 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 18:24:19] CVMFS is ok
[2025-07-26 18:24:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 18:24:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 18:24:19] Further information can be found at the LHC@home message board.
[2025-07-26 18:24:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 18:24:19] Checking for apptainer binary...
[2025-07-26 18:24:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 18:24:19] Running /usr/bin/apptainer --version
[2025-07-26 18:24:19] apptainer version 1.4.1-1.el9
[2025-07-26 18:24:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 18:24:19] c8-7-1.aglt2.org
[2025-07-26 18:24:19] apptainer works
[2025-07-26 18:24:19] Set ATHENA_PROC_NUMBER=8
[2025-07-26 18:24:19] Set ATHENA_CORE_NUMBER=8
[2025-07-26 18:24:19] Starting ATLAS job with PandaID=6745229219
[2025-07-26 18:24:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 19:59:13]  *** The last 200 lines of the pilot log: ***
[2025-07-26 19:59:13] 2025-07-26 23:58:05,278 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 19:59:13] 2025-07-26 23:58:05,278 | INFO     | log transfer has been attempted: DONE
[2025-07-26 19:59:13] 2025-07-26 23:58:05,278 | INFO     | job 6745229219 has finished - writing final server update
[2025-07-26 19:59:13] 2025-07-26 23:58:05,278 | INFO     | total number of processed events: 400 (read)
[2025-07-26 19:59:13] 2025-07-26 23:58:05,320 | INFO     | executing command: lscpu
[2025-07-26 19:59:13] 2025-07-26 23:58:05,449 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 19:59:13] 2025-07-26 23:58:07,565 | INFO     | monitor loop #367: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:07,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:10,072 | INFO     | monitor loop #368: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:10,072 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:12,606 | INFO     | monitor loop #369: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:12,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:12,876 | INFO     | PID=1745721 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 19:59:13] 2025-07-26 23:58:12,876 | INFO     | .. there are 27 such processes running
[2025-07-26 19:59:13] 2025-07-26 23:58:15,111 | INFO     | monitor loop #370: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:15,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:17,620 | INFO     | monitor loop #371: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:17,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:20,145 | INFO     | monitor loop #372: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:20,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:22,649 | INFO     | monitor loop #373: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:22,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:25,154 | INFO     | monitor loop #374: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:25,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:27,659 | INFO     | monitor loop #375: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:27,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:30,164 | INFO     | monitor loop #376: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:30,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:32,669 | INFO     | monitor loop #377: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:32,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:35,179 | INFO     | monitor loop #378: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:35,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:36,289 | INFO     | PID=1745721 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 19:59:13] 2025-07-26 23:58:36,290 | INFO     | .. there are 27 such processes running
[2025-07-26 19:59:13] 2025-07-26 23:58:37,684 | INFO     | monitor loop #379: job 0:6745229219 is in state 'finished'
[2025-07-26 19:59:13] 2025-07-26 23:58:37,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:59:13] 2025-07-26 23:58:38,192 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 19:59:13] 2025-07-26 23:58:38,198 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3585.989890624998
[2025-07-26 19:59:13] 2025-07-26 23:58:38,215 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6745229219/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 19:59:13] 2025-07-26 23:58:38,216 | INFO     | extracted standard info from prmon json
[2025-07-26 19:59:13] 2025-07-26 23:58:38,216 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 19:59:13] 2025-07-26 23:58:38,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 19:59:13] 2025-07-26 23:58:38,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 19:59:13] 2025-07-26 23:58:38,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 19:59:13] 2025-07-26 23:58:38,217 | INFO     | fitting pss+swap vs Time
[2025-07-26 19:59:13] 2025-07-26 23:58:38,217 | INFO     | sum of square deviations: 170944600.5
[2025-07-26 19:59:13] 2025-07-26 23:58:38,218 | INFO     | sum of deviations: -9642970188.499998
[2025-07-26 19:59:13] 2025-07-26 23:58:38,218 | INFO     | mean x: 1753571641.5
[2025-07-26 19:59:13] 2025-07-26 23:58:38,218 | INFO     | mean y: 2503216.426829268
[2025-07-26 19:59:13] 2025-07-26 23:58:38,218 | INFO     | -- intersect: 98921328455.27084
[2025-07-26 19:59:13] 2025-07-26 23:58:38,218 | INFO     | intersect: 98921328455.27084
[2025-07-26 19:59:13] 2025-07-26 23:58:38,218 | INFO     | chi2: 0.054684539917939985
[2025-07-26 19:59:13] 2025-07-26 23:58:38,218 | INFO     | -- intersect: 98921328455.27084
[2025-07-26 19:59:13] 2025-07-26 23:58:38,218 | INFO     | current memory leak: -56.41 B/s (using 82 data points, chi2=0.05)
[2025-07-26 19:59:13] 2025-07-26 23:58:38,218 | INFO     | could have reported an average CPU frequency of 3638 MHz (7 samples)
[2025-07-26 19:59:13] 2025-07-26 23:58:38,219 | INFO     | ..............................
[2025-07-26 19:59:13] 2025-07-26 23:58:38,219 | INFO     | . Timing measurements:
[2025-07-26 19:59:13] 2025-07-26 23:58:38,219 | INFO     | . get job = 0 s
[2025-07-26 19:59:13] 2025-07-26 23:58:38,219 | INFO     | . initial setup = 7 s
[2025-07-26 19:59:13] 2025-07-26 23:58:38,219 | INFO     | . payload setup = 46 s
[2025-07-26 19:59:13] 2025-07-26 23:58:38,219 | INFO     | . stage-in = 0 s
[2025-07-26 19:59:13] 2025-07-26 23:58:38,219 | INFO     | . payload execution = 5441 s
[2025-07-26 19:59:13] 2025-07-26 23:58:38,219 | INFO     | . stage-out = 2 s
[2025-07-26 19:59:13] 2025-07-26 23:58:38,219 | INFO     | . log creation = 0 s
[2025-07-26 19:59:13] 2025-07-26 23:58:38,219 | INFO     | ..............................
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | 
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | job summary report
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | --------------------------------------------------
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | PanDA job id: 6745229219
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | task id: 45743349
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | errors: (none)
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | pilot state: finished 
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | transexitcode: 0
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | exeerrorcode: 0
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | exeerrordiag: 
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | exitcode: 0
[2025-07-26 19:59:13] 2025-07-26 23:58:38,371 | INFO     | exitmsg: OK
[2025-07-26 19:59:13] 2025-07-26 23:58:38,372 | INFO     | cpuconsumptiontime: 28970 s
[2025-07-26 19:59:13] 2025-07-26 23:58:38,372 | INFO     | nevents: 400
[2025-07-26 19:59:13] 2025-07-26 23:58:38,372 | INFO     | neventsw: 0
[2025-07-26 19:59:13] 2025-07-26 23:58:38,372 | INFO     | pid: 1796513
[2025-07-26 19:59:13] 2025-07-26 23:58:38,372 | INFO     | pgrp: 1796513
[2025-07-26 19:59:13] 2025-07-26 23:58:38,372 | INFO     | corecount: 8
[2025-07-26 19:59:13] 2025-07-26 23:58:38,372 | INFO     | event service: False
[2025-07-26 19:59:13] 2025-07-26 23:58:38,372 | INFO     | sizes: {0: 2397304, 1: 2397503, 2: 2397503, 13: 2397531, 24: 2397587, 30: 2397877, 34: 2398033, 5491: 2424623, 5493: 2433621, 5495: 2433677, 5528: 2433871}
[2025-07-26 19:59:13] 2025-07-26 23:58:38,372 | INFO     | --------------------------------------------------
[2025-07-26 19:59:13] 2025-07-26 23:58:38,372 | INFO     | 
[2025-07-26 19:59:13] 2025-07-26 23:58:38,372 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-26 19:59:13] 2025-07-26 23:58:38,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | job 6745229219 has completed (purged errors)
[2025-07-26 19:59:13] 2025-07-26 23:58:38,490 | INFO     | overall cleanup function is called
[2025-07-26 19:59:13] 2025-07-26 23:58:39,498 | INFO     | --- collectZombieJob: --- 10, [1796513]
[2025-07-26 19:59:13] 2025-07-26 23:58:39,498 | INFO     | zombie collector waiting for pid 1796513
[2025-07-26 19:59:13] 2025-07-26 23:58:39,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 19:59:13] 2025-07-26 23:58:39,498 | INFO     | collected zombie processes
[2025-07-26 19:59:13] 2025-07-26 23:58:39,498 | INFO     | will attempt to kill all subprocesses of pid=1796513
[2025-07-26 19:59:13] 2025-07-26 23:58:40,642 | INFO     | process IDs to be killed: [1796513] (in reverse order)
[2025-07-26 19:59:13] 2025-07-26 23:58:40,953 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 19:59:13] 2025-07-26 23:58:40,954 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 19:59:13] 2025-07-26 23:58:41,002 | INFO     | did not find any defunct processes belonging to 1796513
[2025-07-26 19:59:13] 2025-07-26 23:58:41,055 | INFO     | did not find any defunct processes belonging to 1796513
[2025-07-26 19:59:13] 2025-07-26 23:58:41,056 | INFO     | ready for new job
[2025-07-26 19:59:13] 2025-07-26 23:58:41,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 19:59:13] 2025-07-26 23:58:41,059 | INFO     | ***************************************
[2025-07-26 19:59:13] 2025-07-26 23:58:41,060 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 19:59:13] 2025-07-26 23:58:41,060 | INFO     | ***************************************
[2025-07-26 19:59:13] 2025-07-26 23:58:41,060 | INFO     | 
[2025-07-26 19:59:13] 2025-07-26 23:58:41,083 | INFO     | architecture information:
[2025-07-26 19:59:13] 2025-07-26 23:58:41,087 | INFO     | executing command: cat /etc/os-release
[2025-07-26 19:59:13] 2025-07-26 23:58:41,159 | INFO     | cat /etc/os-release:
[2025-07-26 19:59:13] NAME="CentOS Linux"
[2025-07-26 19:59:13] VERSION="7 (Core)"
[2025-07-26 19:59:13] ID="centos"
[2025-07-26 19:59:13] ID_LIKE="rhel fedora"
[2025-07-26 19:59:13] VERSION_ID="7"
[2025-07-26 19:59:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 19:59:13] ANSI_COLOR="0;31"
[2025-07-26 19:59:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 19:59:13] HOME_URL="https://www.centos.org/"
[2025-07-26 19:59:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 19:59:13] 
[2025-07-26 19:59:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 19:59:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 19:59:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 19:59:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 19:59:13] 
[2025-07-26 19:59:13] 2025-07-26 23:58:41,159 | INFO     | ***************************************
[2025-07-26 19:59:13] 2025-07-26 23:58:41,663 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-26 19:59:13] 2025-07-26 23:58:41,776 | INFO     | sufficient remaining disk space (95254740992 B)
[2025-07-26 19:59:13] 2025-07-26 23:58:41,776 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 19:59:13] 2025-07-26 23:58:41,776 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 19:59:13] 2025-07-26 23:58:41,776 | INFO     | update_server=False
[2025-07-26 19:59:13] 2025-07-26 23:58:41,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 19:59:13] 2025-07-26 23:58:41,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:59:13] 2025-07-26 23:58:41,776 | INFO     | aborting loop
[2025-07-26 19:59:13] 2025-07-26 23:58:41,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 19:59:13] 2025-07-26 23:58:42,023 | INFO     | all job control threads have been joined
[2025-07-26 19:59:13] 2025-07-26 23:58:42,078 | INFO     | all data control threads have been joined
[2025-07-26 19:59:13] 2025-07-26 23:58:42,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 19:59:13] 2025-07-26 23:58:42,782 | INFO     | [job] retrieve thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:42,782 | INFO     | [job] job monitor thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:42,923 | INFO     | all payload control threads have been joined
[2025-07-26 19:59:13] 2025-07-26 23:58:43,029 | INFO     | [job] control thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:43,084 | INFO     | [data] control thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:43,154 | INFO     | [payload] failed_post thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:43,197 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:43,250 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:43,297 | INFO     | [job] validate thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:43,379 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:59:13] 2025-07-26 23:58:43,733 | INFO     | [data] copytool_in thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:43,784 | INFO     | [data] copytool_out thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:43,941 | INFO     | [payload] control thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:44,217 | INFO     | [payload] validate_post thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:44,290 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:44,386 | INFO     | [job] queue monitor thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:46,685 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:52,392 | INFO     | job.realtimelogging is not enabled
[2025-07-26 19:59:13] 2025-07-26 23:58:53,398 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 19:59:13] 2025-07-26 23:58:54,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298473609024)>', '<ExcThread(monitor, started 140297824614144)>']
[2025-07-26 19:59:13] 2025-07-26 23:59:00,018 | INFO     | all workflow threads have been joined
[2025-07-26 19:59:13] 2025-07-26 23:59:00,018 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 19:59:13] 2025-07-26 23:59:00,018 | INFO     | traces error code: 0
[2025-07-26 19:59:13] 2025-07-26 23:59:00,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 19:59:13] 2025-07-26 23:59:11,490 | INFO     | PID=1745721 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 19:59:13] 2025-07-26 23:59:11,490 | INFO     | .. there are 27 such processes running
[2025-07-26 19:59:13] 2025-07-26 23:59:11,490 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 19:59:13] 2025-07-26 23:59:11,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 19:59:13] 2025-07-26 23:59:11,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 19:59:13] 2025-07-26 23:59:11,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 19:59:13] 2025-07-26 23:59:11,491 | INFO     | [monitor] control thread has ended
[2025-07-26 19:59:13] 2025-07-26 23:59:11,627 [wrapper] ==== pilot stdout END ====
[2025-07-26 19:59:13] 2025-07-26 23:59:11,647 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 19:59:13] 2025-07-26 23:59:11,669 [wrapper] pilotpid: 1745721
[2025-07-26 19:59:13] 2025-07-26 23:59:11,684 [wrapper] Pilot exit status: 0
[2025-07-26 19:59:13] 2025-07-26 23:59:11,781 [wrapper] pandaids: 6745229219
[2025-07-26 19:59:13] 2025-07-26 23:59:12,271 [wrapper] cleanup supervisor_pilot 2386925 1745722
[2025-07-26 19:59:13] 2025-07-26 23:59:12,314 [wrapper] Test setup, not cleaning
[2025-07-26 19:59:13] 2025-07-26 23:59:12,337 [wrapper] apfmon messages muted
[2025-07-26 19:59:13] 2025-07-26 23:59:12,348 [wrapper] ==== wrapper stdout END ====
[2025-07-26 19:59:13] 2025-07-26 23:59:12,372 [wrapper] ==== wrapper stderr END ====
[2025-07-26 19:59:13]  *** Error codes and diagnostics ***
[2025-07-26 19:59:13]     "exeErrorCode": 0,
[2025-07-26 19:59:13]     "exeErrorDiag": "",
[2025-07-26 19:59:13]     "pilotErrorCode": 0,
[2025-07-26 19:59:13]     "pilotErrorDiag": "",
[2025-07-26 19:59:13]  *** Listing of results directory ***
[2025-07-26 19:59:13] total 428936
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 10:04 pilot3.tar.gz
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 10:20 queuedata.json
[2025-07-26 19:59:13] -rwx------. 1 boincer umatlas     36292 Jul 26 10:20 runpilot2-wrapper.sh
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas       100 Jul 26 18:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 19:59:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 18:24 run_atlas
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas       105 Jul 26 18:24 job.xml
[2025-07-26 19:59:13] -rw-r--r--. 2 boincer umatlas 230346101 Jul 26 18:24 EVNT.45743347._002243.pool.root.1
[2025-07-26 19:59:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 18:24 start_atlas.sh
[2025-07-26 19:59:13] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 18:24 shared
[2025-07-26 19:59:13] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 18:24 input.tar.gz
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas         0 Jul 26 18:24 boinc_lockfile
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 18:24 pandaJob.out
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas    980125 Jul 26 18:25 agis_schedconf.cvmfs.json
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas   1593052 Jul 26 18:25 agis_ddmendpoints.agis.ALL.json
[2025-07-26 19:59:13] drwx------. 4 boincer umatlas      4096 Jul 26 18:25 pilot3
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas 203351752 Jul 26 19:57 HITS.45743349._039290.pool.root.1
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas       530 Jul 26 19:57 boinc_task_state.xml
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas      7160 Jul 26 19:57 init_data.xml
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas      1045 Jul 26 19:57 memory_monitor_summary.json
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas    324627 Jul 26 19:58 log.45743349._039290.job.log.tgz.1
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas        95 Jul 26 19:58 pilot_heartbeat.json
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas      7801 Jul 26 19:58 heartbeat.json
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas       823 Jul 26 19:59 pilotlog.txt
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas        27 Jul 26 19:59 wrapper_checkpoint.txt
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 19:59 boinc_mmap_file
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas    501522 Jul 26 19:59 log.45743349._039290.job.log.1
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas       357 Jul 26 19:59 output.list
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas       620 Jul 26 19:59 runtime_log
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas    849920 Jul 26 19:59 result.tar.gz
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas       655 Jul 26 19:59 8xgMDmbwuz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2t0KDmMC8uon.diag
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas      8650 Jul 26 19:59 runtime_log.err
[2025-07-26 19:59:13] -rw-r--r--. 1 boincer umatlas     22517 Jul 26 19:59 stderr.txt
[2025-07-26 19:59:13] HITS file was successfully produced:
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas 203351752 Jul 26 19:57 shared/HITS.pool.root.1
[2025-07-26 19:59:13]  *** Contents of shared directory: ***
[2025-07-26 19:59:13] total 424920
[2025-07-26 19:59:13] -rw-r--r--. 2 boincer umatlas 230346101 Jul 26 18:24 ATLAS.root_0
[2025-07-26 19:59:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 18:24 start_atlas.sh
[2025-07-26 19:59:13] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 18:24 input.tar.gz
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas 203351752 Jul 26 19:57 HITS.pool.root.1
[2025-07-26 19:59:13] -rw-------. 1 boincer umatlas    849920 Jul 26 19:59 result.tar.gz
19:59:14 (1718375): run_atlas exited; CPU time 29112.242875
19:59:14 (1718375): called boinc_finish(0)

</stderr_txt>
]]>

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