Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:37:42 (2085688): wrapper (7.7.26015): starting
19:37:42 (2085688): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 19:37:42] Arguments: --nthreads 12
[2025-07-26 19:37:42] Threads: 12
[2025-07-26 19:37:42] Checking for CVMFS
[2025-07-26 19:37:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 19:37:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 19:37:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 19:37:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 19:37:42] 2.13.0.0 842134 17594 364912 148793 1 371 32827006 32935936 9187 16776704 0 39826484 99.702 70568816 32675 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 19:37:42] CVMFS is ok
[2025-07-26 19:37:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 19:37:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 19:37:42] Further information can be found at the LHC@home message board.
[2025-07-26 19:37:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 19:37:42] Checking for apptainer binary...
[2025-07-26 19:37:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 19:37:42] Running /usr/bin/apptainer --version
[2025-07-26 19:37:42] apptainer version 1.4.1-1.el9
[2025-07-26 19:37:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 19:37:42] c6-5-37-2.aglt2.org
[2025-07-26 19:37:42] apptainer works
[2025-07-26 19:37:42] Set ATHENA_PROC_NUMBER=12
[2025-07-26 19:37:42] Set ATHENA_CORE_NUMBER=12
[2025-07-26 19:37:42] Starting ATLAS job with PandaID=6745264002
[2025-07-26 19:37:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 21:08:59]  *** The last 200 lines of the pilot log: ***
[2025-07-26 21:08:59]  is_tar=False
[2025-07-26 21:08:59]  lfn=log.45743349._041403.job.log.tgz.1
[2025-07-26 21:08:59]  mtime=0
[2025-07-26 21:08:59]  protocol_id=None
[2025-07-26 21:08:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 21:08:59]  replicas=None
[2025-07-26 21:08:59]  scope=mc23_13p6TeV
[2025-07-26 21:08:59]  status=None
[2025-07-26 21:08:59]  status_code=0
[2025-07-26 21:08:59]  storage_token=
[2025-07-26 21:08:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745264002/log.45743349._041403.job.log.tgz.1
[2025-07-26 21:08:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/84/log.45743349._041403.job.log.tgz.1
[2025-07-26 21:08:59]  workdir=None
[2025-07-26 21:08:59] ]
[2025-07-26 21:08:59] 2025-07-27 01:08:18,571 | INFO     | transferring file log.45743349._041403.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745264002/log.45743349._041403.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 21:08:59] 2025-07-27 01:08:18,571 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745264002/log.45743349._041403.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._041403.job
[2025-07-26 21:08:59] 2025-07-27 01:08:18,593 | INFO     | adding to output.list: log.45743349._041403.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/84/log.45743349._041403.job.log.tg
[2025-07-26 21:08:59] 2025-07-27 01:08:18,594 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 21:08:59] 2025-07-27 01:08:18,594 | INFO     | summary of transferred files:
[2025-07-26 21:08:59] 2025-07-27 01:08:18,594 | INFO     |  -- lfn=log.45743349._041403.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 21:08:59] 2025-07-27 01:08:18,594 | INFO     | stage-out finished correctly
[2025-07-26 21:08:59] 2025-07-27 01:08:18,713 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 21:08:59] 2025-07-27 01:08:19,492 | INFO     | job 6745264002 has state=finished
[2025-07-26 21:08:59] 2025-07-27 01:08:19,492 | INFO     | preparing for final server update for job 6745264002 in state='finished'
[2025-07-26 21:08:59] 2025-07-27 01:08:19,493 | INFO     | this job has now completed (state=finished)
[2025-07-26 21:08:59] 2025-07-27 01:08:19,493 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 21:08:59] 2025-07-27 01:08:19,494 | INFO     | log transfer has been attempted: DONE
[2025-07-26 21:08:59] 2025-07-27 01:08:19,494 | INFO     | job 6745264002 has finished - writing final server update
[2025-07-26 21:08:59] 2025-07-27 01:08:19,494 | INFO     | total number of processed events: 400 (read)
[2025-07-26 21:08:59] 2025-07-27 01:08:19,495 | INFO     | executing command: lscpu
[2025-07-26 21:08:59] 2025-07-27 01:08:19,557 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 21:08:59] 2025-07-27 01:08:20,340 | INFO     | monitor loop #356: job 0:6745264002 is in state 'finished'
[2025-07-26 21:08:59] 2025-07-27 01:08:20,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:08:59] 2025-07-27 01:08:22,844 | INFO     | monitor loop #357: job 0:6745264002 is in state 'finished'
[2025-07-26 21:08:59] 2025-07-27 01:08:22,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:08:59] 2025-07-27 01:08:25,348 | INFO     | monitor loop #358: job 0:6745264002 is in state 'finished'
[2025-07-26 21:08:59] 2025-07-27 01:08:25,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:08:59] 2025-07-27 01:08:26,213 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 21:08:59] 2025-07-27 01:08:26,229 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2671.5067142857147
[2025-07-26 21:08:59] 2025-07-27 01:08:26,235 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745264002/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:08:59] 2025-07-27 01:08:26,237 | INFO     | extracted standard info from prmon json
[2025-07-26 21:08:59] 2025-07-27 01:08:26,237 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:08:59] 2025-07-27 01:08:26,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:08:59] 2025-07-27 01:08:26,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:08:59] 2025-07-27 01:08:26,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:08:59] 2025-07-27 01:08:26,240 | INFO     | fitting pss+swap vs Time
[2025-07-26 21:08:59] 2025-07-27 01:08:26,240 | INFO     | sum of square deviations: 170986283.21951243
[2025-07-26 21:08:59] 2025-07-27 01:08:26,241 | INFO     | sum of deviations: -17325143155.048782
[2025-07-26 21:08:59] 2025-07-27 01:08:26,241 | INFO     | mean x: 1753575877.902439
[2025-07-26 21:08:59] 2025-07-27 01:08:26,241 | INFO     | mean y: 2548054.7439024393
[2025-07-26 21:08:59] 2025-07-27 01:08:26,241 | INFO     | -- intersect: 177683193226.12872
[2025-07-26 21:08:59] 2025-07-27 01:08:26,241 | INFO     | intersect: 177683193226.12872
[2025-07-26 21:08:59] 2025-07-27 01:08:26,241 | INFO     | chi2: 0.1860223595020345
[2025-07-26 21:08:59] 2025-07-27 01:08:26,242 | INFO     | -- intersect: 177683193226.12872
[2025-07-26 21:08:59] 2025-07-27 01:08:26,242 | INFO     | current memory leak: -101.32 B/s (using 82 data points, chi2=0.19)
[2025-07-26 21:08:59] 2025-07-27 01:08:26,242 | INFO     | could have reported an average CPU frequency of 2671 MHz (6 samples)
[2025-07-26 21:08:59] 2025-07-27 01:08:26,242 | INFO     | ..............................
[2025-07-26 21:08:59] 2025-07-27 01:08:26,243 | INFO     | . Timing measurements:
[2025-07-26 21:08:59] 2025-07-27 01:08:26,243 | INFO     | . get job = 0 s
[2025-07-26 21:08:59] 2025-07-27 01:08:26,243 | INFO     | . initial setup = 2 s
[2025-07-26 21:08:59] 2025-07-27 01:08:26,243 | INFO     | . payload setup = 7 s
[2025-07-26 21:08:59] 2025-07-27 01:08:26,243 | INFO     | . stage-in = 0 s
[2025-07-26 21:08:59] 2025-07-27 01:08:26,243 | INFO     | . payload execution = 5397 s
[2025-07-26 21:08:59] 2025-07-27 01:08:26,243 | INFO     | . stage-out = 0 s
[2025-07-26 21:08:59] 2025-07-27 01:08:26,243 | INFO     | . log creation = 0 s
[2025-07-26 21:08:59] 2025-07-27 01:08:26,243 | INFO     | ..............................
[2025-07-26 21:08:59] 2025-07-27 01:08:26,335 | INFO     | 
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | job summary report
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | --------------------------------------------------
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | PanDA job id: 6745264002
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | task id: 45743349
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | errors: (none)
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | pilot state: finished 
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | transexitcode: 0
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | exeerrorcode: 0
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | exeerrordiag: 
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | exitcode: 0
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | exitmsg: OK
[2025-07-26 21:08:59] 2025-07-27 01:08:26,336 | INFO     | cpuconsumptiontime: 46979 s
[2025-07-26 21:08:59] 2025-07-27 01:08:26,337 | INFO     | nevents: 400
[2025-07-26 21:08:59] 2025-07-27 01:08:26,337 | INFO     | neventsw: 0
[2025-07-26 21:08:59] 2025-07-27 01:08:26,337 | INFO     | pid: 2096255
[2025-07-26 21:08:59] 2025-07-27 01:08:26,337 | INFO     | pgrp: 2096255
[2025-07-26 21:08:59] 2025-07-27 01:08:26,337 | INFO     | corecount: 12
[2025-07-26 21:08:59] 2025-07-27 01:08:26,337 | INFO     | event service: False
[2025-07-26 21:08:59] 2025-07-27 01:08:26,337 | INFO     | sizes: {0: 2397474, 5: 2397736, 11: 2397792, 5408: 2424218, 5409: 2433272, 5416: 2433410}
[2025-07-26 21:08:59] 2025-07-27 01:08:26,337 | INFO     | --------------------------------------------------
[2025-07-26 21:08:59] 2025-07-27 01:08:26,337 | INFO     | 
[2025-07-26 21:08:59] 2025-07-27 01:08:26,337 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 21:08:59] 2025-07-27 01:08:26,360 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,361 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,361 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,361 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,361 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,361 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,361 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,361 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,362 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,362 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,362 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,362 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,362 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,362 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,362 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,363 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 21:08:59] 2025-07-27 01:08:26,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,363 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 21:08:59] 2025-07-27 01:08:26,363 | INFO     | job 6745264002 has completed (purged errors)
[2025-07-26 21:08:59] 2025-07-27 01:08:26,364 | INFO     | overall cleanup function is called
[2025-07-26 21:08:59] 2025-07-27 01:08:27,373 | INFO     | --- collectZombieJob: --- 10, [2096255]
[2025-07-26 21:08:59] 2025-07-27 01:08:27,373 | INFO     | zombie collector waiting for pid 2096255
[2025-07-26 21:08:59] 2025-07-27 01:08:27,373 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 21:08:59] 2025-07-27 01:08:27,373 | INFO     | collected zombie processes
[2025-07-26 21:08:59] 2025-07-27 01:08:27,373 | INFO     | will attempt to kill all subprocesses of pid=2096255
[2025-07-26 21:08:59] 2025-07-27 01:08:27,609 | INFO     | process IDs to be killed: [2096255] (in reverse order)
[2025-07-26 21:08:59] 2025-07-27 01:08:27,718 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 21:08:59] 2025-07-27 01:08:27,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 21:08:59] 2025-07-27 01:08:27,730 | INFO     | did not find any defunct processes belonging to 2096255
[2025-07-26 21:08:59] 2025-07-27 01:08:27,740 | INFO     | did not find any defunct processes belonging to 2096255
[2025-07-26 21:08:59] 2025-07-27 01:08:27,740 | INFO     | ready for new job
[2025-07-26 21:08:59] 2025-07-27 01:08:27,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 21:08:59] 2025-07-27 01:08:27,742 | INFO     | ***************************************
[2025-07-26 21:08:59] 2025-07-27 01:08:27,742 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 21:08:59] 2025-07-27 01:08:27,742 | INFO     | ***************************************
[2025-07-26 21:08:59] 2025-07-27 01:08:27,742 | INFO     | 
[2025-07-26 21:08:59] 2025-07-27 01:08:27,758 | INFO     | architecture information:
[2025-07-26 21:08:59] 2025-07-27 01:08:27,758 | INFO     | executing command: cat /etc/os-release
[2025-07-26 21:08:59] 2025-07-27 01:08:27,776 | INFO     | cat /etc/os-release:
[2025-07-26 21:08:59] NAME="CentOS Linux"
[2025-07-26 21:08:59] VERSION="7 (Core)"
[2025-07-26 21:08:59] ID="centos"
[2025-07-26 21:08:59] ID_LIKE="rhel fedora"
[2025-07-26 21:08:59] VERSION_ID="7"
[2025-07-26 21:08:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 21:08:59] ANSI_COLOR="0;31"
[2025-07-26 21:08:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 21:08:59] HOME_URL="https://www.centos.org/"
[2025-07-26 21:08:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 21:08:59] 
[2025-07-26 21:08:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 21:08:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 21:08:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 21:08:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 21:08:59] 
[2025-07-26 21:08:59] 2025-07-27 01:08:27,777 | INFO     | ***************************************
[2025-07-26 21:08:59] 2025-07-27 01:08:28,279 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 21:08:59] 2025-07-27 01:08:28,302 | INFO     | sufficient remaining disk space (76530319360 B)
[2025-07-26 21:08:59] 2025-07-27 01:08:28,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 21:08:59] 2025-07-27 01:08:28,302 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 21:08:59] 2025-07-27 01:08:28,302 | INFO     | update_server=False
[2025-07-26 21:08:59] 2025-07-27 01:08:28,302 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 21:08:59] 2025-07-27 01:08:28,303 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:08:59] 2025-07-27 01:08:28,497 | INFO     | all job control threads have been joined
[2025-07-26 21:08:59] 2025-07-27 01:08:28,857 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:08:59] 2025-07-27 01:08:28,857 | INFO     | aborting loop
[2025-07-26 21:08:59] 2025-07-27 01:08:28,978 | INFO     | all payload control threads have been joined
[2025-07-26 21:08:59] 2025-07-27 01:08:29,233 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 21:08:59] 2025-07-27 01:08:29,280 | INFO     | all data control threads have been joined
[2025-07-26 21:08:59] 2025-07-27 01:08:29,307 | INFO     | [job] retrieve thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:29,308 | INFO     | [job] queue monitor thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:29,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 21:08:59] 2025-07-27 01:08:29,347 | INFO     | [job] validate thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:29,502 | INFO     | [job] control thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:29,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:29,863 | INFO     | [job] job monitor thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:29,970 | INFO     | [payload] validate_post thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:29,983 | INFO     | [payload] control thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:30,020 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:30,023 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:30,285 | INFO     | [data] control thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:30,451 | INFO     | [data] copytool_in thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:30,682 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:30,835 | INFO     | [payload] failed_post thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:31,240 | INFO     | [data] copytool_out thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:33,346 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 21:08:59] 2025-07-27 01:08:33,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364371441472)>', '<ExcThread(monitor, started 140363733911296)>']
[2025-07-26 21:08:59] 2025-07-27 01:08:38,527 | INFO     | all workflow threads have been joined
[2025-07-26 21:08:59] 2025-07-27 01:08:38,528 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 21:08:59] 2025-07-27 01:08:38,529 | INFO     | traces error code: 0
[2025-07-26 21:08:59] 2025-07-27 01:08:38,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 21:08:59] 2025-07-27 01:08:58,964 | INFO     | PID=2089268 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 21:08:59] 2025-07-27 01:08:58,964 | INFO     | .. there are 15 such processes running
[2025-07-26 21:08:59] 2025-07-27 01:08:58,965 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 21:08:59] 2025-07-27 01:08:58,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 21:08:59] 2025-07-27 01:08:58,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 21:08:59] 2025-07-27 01:08:58,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 21:08:59] 2025-07-27 01:08:58,965 | INFO     | [monitor] control thread has ended
[2025-07-26 21:08:59] 2025-07-27 01:08:59,172 [wrapper] ==== pilot stdout END ====
[2025-07-26 21:08:59] 2025-07-27 01:08:59,177 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 21:08:59] 2025-07-27 01:08:59,182 [wrapper] pilotpid: 2089268
[2025-07-26 21:08:59] 2025-07-27 01:08:59,185 [wrapper] Pilot exit status: 0
[2025-07-26 21:08:59] 2025-07-27 01:08:59,202 [wrapper] pandaids: 6745264002
[2025-07-26 21:08:59] 2025-07-27 01:08:59,283 [wrapper] cleanup supervisor_pilot 2357472 2089269
[2025-07-26 21:08:59] 2025-07-27 01:08:59,288 [wrapper] Test setup, not cleaning
[2025-07-26 21:08:59] 2025-07-27 01:08:59,293 [wrapper] apfmon messages muted
[2025-07-26 21:08:59] 2025-07-27 01:08:59,300 [wrapper] ==== wrapper stdout END ====
[2025-07-26 21:08:59] 2025-07-27 01:08:59,306 [wrapper] ==== wrapper stderr END ====
[2025-07-26 21:08:59]  *** Error codes and diagnostics ***
[2025-07-26 21:08:59]     "exeErrorCode": 0,
[2025-07-26 21:08:59]     "exeErrorDiag": "",
[2025-07-26 21:08:59]     "pilotErrorCode": 0,
[2025-07-26 21:08:59]     "pilotErrorDiag": "",
[2025-07-26 21:08:59]  *** Listing of results directory ***
[2025-07-26 21:08:59] total 358100
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 13:01 pilot3.tar.gz
[2025-07-26 21:08:59] -rwx------. 1 boincer umatlas     36292 Jul 26 13:04 runpilot2-wrapper.sh
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 13:04 queuedata.json
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas       100 Jul 26 19:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 21:08:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 19:37 run_atlas
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas       105 Jul 26 19:37 job.xml
[2025-07-26 21:08:59] -rw-r--r--. 2 boincer umatlas 147774295 Jul 26 19:37 EVNT.45743347._002458.pool.root.1
[2025-07-26 21:08:59] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 19:37 shared
[2025-07-26 21:08:59] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 19:37 input.tar.gz
[2025-07-26 21:08:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 19:37 start_atlas.sh
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas         0 Jul 26 19:37 boinc_lockfile
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 19:37 pandaJob.out
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas    980117 Jul 26 19:37 agis_schedconf.cvmfs.json
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas   1593052 Jul 26 19:37 agis_ddmendpoints.agis.ALL.json
[2025-07-26 21:08:59] drwx------. 4 boincer umatlas      4096 Jul 26 19:37 pilot3
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas      6843 Jul 26 21:03 init_data.xml
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas       529 Jul 26 21:07 boinc_task_state.xml
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas 213338004 Jul 26 21:07 HITS.45743349._041403.pool.root.1
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas      1038 Jul 26 21:08 memory_monitor_summary.json
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas    366941 Jul 26 21:08 log.45743349._041403.job.log.tgz.1
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas      7825 Jul 26 21:08 heartbeat.json
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 21:08 boinc_mmap_file
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas        27 Jul 26 21:08 wrapper_checkpoint.txt
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas        95 Jul 26 21:08 pilot_heartbeat.json
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas       823 Jul 26 21:08 pilotlog.txt
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas    489063 Jul 26 21:08 log.45743349._041403.job.log.1
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas       357 Jul 26 21:08 output.list
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas       620 Jul 26 21:08 runtime_log
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas    870400 Jul 26 21:08 result.tar.gz
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas      8667 Jul 26 21:08 runtime_log.err
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas       653 Jul 26 21:08 DfTMDmoUxz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmn60KDmi9mNPm.diag
[2025-07-26 21:08:59] -rw-r--r--. 1 boincer umatlas     21608 Jul 26 21:08 stderr.txt
[2025-07-26 21:08:59] HITS file was successfully produced:
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas 213338004 Jul 26 21:07 shared/HITS.pool.root.1
[2025-07-26 21:08:59]  *** Contents of shared directory: ***
[2025-07-26 21:08:59] total 354056
[2025-07-26 21:08:59] -rw-r--r--. 2 boincer umatlas 147774295 Jul 26 19:37 ATLAS.root_0
[2025-07-26 21:08:59] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 19:37 input.tar.gz
[2025-07-26 21:08:59] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 19:37 start_atlas.sh
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas 213338004 Jul 26 21:07 HITS.pool.root.1
[2025-07-26 21:08:59] -rw-------. 1 boincer umatlas    870400 Jul 26 21:08 result.tar.gz
21:09:00 (2085688): run_atlas exited; CPU time 47066.014382
21:09:00 (2085688): called boinc_finish(0)

</stderr_txt>
]]>

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