Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:11:51 (26421): wrapper (7.7.26015): starting
18:11:51 (26421): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 18:11:51] Arguments: --nthreads 8
[2025-07-26 18:11:51] Threads: 8
[2025-07-26 18:11:51] Checking for CVMFS
[2025-07-26 18:11:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 18:11:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 18:11:51] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 18:11:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 18:11:51] 2.11.2.0 3213 516082 243336 148790 0 188 19911593 20275201 917 130560 0 178579173 99.988 22506172 19701 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 18:11:51] CVMFS is ok
[2025-07-26 18:11:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 18:11:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 18:11:51] Further information can be found at the LHC@home message board.
[2025-07-26 18:11:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 18:11:51] Checking for apptainer binary...
[2025-07-26 18:11:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 18:11:51] Running /usr/bin/apptainer --version
[2025-07-26 18:11:51] apptainer version 1.3.2-1.el7
[2025-07-26 18:11:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 18:11:51] c-205-38.aglt2.org
[2025-07-26 18:11:51] apptainer works
[2025-07-26 18:11:51] Set ATHENA_PROC_NUMBER=8
[2025-07-26 18:11:51] Set ATHENA_CORE_NUMBER=8
[2025-07-26 18:11:51] Starting ATLAS job with PandaID=6745350602
[2025-07-26 18:11:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 19:15:01]  *** The last 200 lines of the pilot log: ***
[2025-07-26 19:15:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-26 19:15:01]  is_altstaged=None
[2025-07-26 19:15:01]  is_tar=False
[2025-07-26 19:15:01]  lfn=log.45743349._041520.job.log.tgz.1
[2025-07-26 19:15:01]  mtime=0
[2025-07-26 19:15:01]  protocol_id=None
[2025-07-26 19:15:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 19:15:01]  replicas=None
[2025-07-26 19:15:01]  scope=mc23_13p6TeV
[2025-07-26 19:15:01]  status=None
[2025-07-26 19:15:01]  status_code=0
[2025-07-26 19:15:01]  storage_token=
[2025-07-26 19:15:01]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745350602/log.45743349._041520.job.log.tgz.1
[2025-07-26 19:15:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/62/log.45743349._041520.job.log.tgz.1
[2025-07-26 19:15:01]  workdir=None
[2025-07-26 19:15:01] ]
[2025-07-26 19:15:01] 2025-07-26 23:14:25,925 | INFO     | transferring file log.45743349._041520.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745350602/log.45743349._041520.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 19:15:01] 2025-07-26 23:14:25,925 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745350602/log.45743349._041520.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._041520.job
[2025-07-26 19:15:01] 2025-07-26 23:14:25,942 | INFO     | adding to output.list: log.45743349._041520.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/62/log.45743349._041520.job.log.tg
[2025-07-26 19:15:01] 2025-07-26 23:14:25,943 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 19:15:01] 2025-07-26 23:14:25,944 | INFO     | summary of transferred files:
[2025-07-26 19:15:01] 2025-07-26 23:14:25,944 | INFO     |  -- lfn=log.45743349._041520.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 19:15:01] 2025-07-26 23:14:25,944 | INFO     | stage-out finished correctly
[2025-07-26 19:15:01] 2025-07-26 23:14:26,482 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 19:15:01] 2025-07-26 23:14:26,567 | INFO     | job 6745350602 has state=finished
[2025-07-26 19:15:01] 2025-07-26 23:14:26,567 | INFO     | preparing for final server update for job 6745350602 in state='finished'
[2025-07-26 19:15:01] 2025-07-26 23:14:26,568 | INFO     | this job has now completed (state=finished)
[2025-07-26 19:15:01] 2025-07-26 23:14:26,568 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 19:15:01] 2025-07-26 23:14:26,568 | INFO     | log transfer has been attempted: DONE
[2025-07-26 19:15:01] 2025-07-26 23:14:26,568 | INFO     | job 6745350602 has finished - writing final server update
[2025-07-26 19:15:01] 2025-07-26 23:14:26,568 | INFO     | total number of processed events: 400 (read)
[2025-07-26 19:15:01] 2025-07-26 23:14:26,569 | INFO     | executing command: lscpu
[2025-07-26 19:15:01] 2025-07-26 23:14:26,593 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 19:15:01] 2025-07-26 23:14:28,037 | INFO     | monitor loop #285: job 0:6745350602 is in state 'finished'
[2025-07-26 19:15:01] 2025-07-26 23:14:28,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:15:01] 2025-07-26 23:14:28,661 | INFO     | PID=30011 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 19:15:01] 2025-07-26 23:14:28,661 | INFO     | .. there are 2 such processes running
[2025-07-26 19:15:01] 2025-07-26 23:14:28,817 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 19:15:01] 2025-07-26 23:14:28,818 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2811.1570624999995
[2025-07-26 19:15:01] 2025-07-26 23:14:28,820 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745350602/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 19:15:01] 2025-07-26 23:14:28,820 | INFO     | extracted standard info from prmon json
[2025-07-26 19:15:01] 2025-07-26 23:14:28,820 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 19:15:01] 2025-07-26 23:14:28,820 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 19:15:01] 2025-07-26 23:14:28,821 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 19:15:01] 2025-07-26 23:14:28,821 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 19:15:01] 2025-07-26 23:14:28,822 | INFO     | fitting pss+swap vs Time
[2025-07-26 19:15:01] 2025-07-26 23:14:28,822 | INFO     | sum of square deviations: 51573060.0
[2025-07-26 19:15:01] 2025-07-26 23:14:28,822 | INFO     | sum of deviations: 640014013.0
[2025-07-26 19:15:01] 2025-07-26 23:14:28,822 | INFO     | mean x: 1753569892.0
[2025-07-26 19:15:01] 2025-07-26 23:14:28,822 | INFO     | mean y: 2514443.8727272726
[2025-07-26 19:15:01] 2025-07-26 23:14:28,822 | INFO     | -- intersect: -21759027408.693256
[2025-07-26 19:15:01] 2025-07-26 23:14:28,822 | INFO     | intersect: -21759027408.693256
[2025-07-26 19:15:01] 2025-07-26 23:14:28,822 | INFO     | chi2: 0.0004550249293999773
[2025-07-26 19:15:01] 2025-07-26 23:14:28,822 | INFO     | -- intersect: -21759027408.693256
[2025-07-26 19:15:01] 2025-07-26 23:14:28,822 | INFO     | current memory leak: 12.41 B/s (using 55 data points, chi2=0.00)
[2025-07-26 19:15:01] 2025-07-26 23:14:28,822 | INFO     | could have reported an average CPU frequency of 3046 MHz (6 samples)
[2025-07-26 19:15:01] 2025-07-26 23:14:28,823 | INFO     | ..............................
[2025-07-26 19:15:01] 2025-07-26 23:14:28,823 | INFO     | . Timing measurements:
[2025-07-26 19:15:01] 2025-07-26 23:14:28,823 | INFO     | . get job = 0 s
[2025-07-26 19:15:01] 2025-07-26 23:14:28,823 | INFO     | . initial setup = 2 s
[2025-07-26 19:15:01] 2025-07-26 23:14:28,823 | INFO     | . payload setup = 4 s
[2025-07-26 19:15:01] 2025-07-26 23:14:28,823 | INFO     | . stage-in = 0 s
[2025-07-26 19:15:01] 2025-07-26 23:14:28,823 | INFO     | . payload execution = 3724 s
[2025-07-26 19:15:01] 2025-07-26 23:14:28,823 | INFO     | . stage-out = 0 s
[2025-07-26 19:15:01] 2025-07-26 23:14:28,823 | INFO     | . log creation = 0 s
[2025-07-26 19:15:01] 2025-07-26 23:14:28,823 | INFO     | ..............................
[2025-07-26 19:15:01] 2025-07-26 23:14:28,868 | INFO     | 
[2025-07-26 19:15:01] 2025-07-26 23:14:28,869 | INFO     | job summary report
[2025-07-26 19:15:01] 2025-07-26 23:14:28,869 | INFO     | --------------------------------------------------
[2025-07-26 19:15:01] 2025-07-26 23:14:28,869 | INFO     | PanDA job id: 6745350602
[2025-07-26 19:15:01] 2025-07-26 23:14:28,869 | INFO     | task id: 45743349
[2025-07-26 19:15:01] 2025-07-26 23:14:28,869 | INFO     | errors: (none)
[2025-07-26 19:15:01] 2025-07-26 23:14:28,869 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 19:15:01] 2025-07-26 23:14:28,870 | INFO     | pilot state: finished 
[2025-07-26 19:15:01] 2025-07-26 23:14:28,870 | INFO     | transexitcode: 0
[2025-07-26 19:15:01] 2025-07-26 23:14:28,870 | INFO     | exeerrorcode: 0
[2025-07-26 19:15:01] 2025-07-26 23:14:28,870 | INFO     | exeerrordiag: 
[2025-07-26 19:15:01] 2025-07-26 23:14:28,870 | INFO     | exitcode: 0
[2025-07-26 19:15:01] 2025-07-26 23:14:28,870 | INFO     | exitmsg: OK
[2025-07-26 19:15:01] 2025-07-26 23:14:28,870 | INFO     | cpuconsumptiontime: 27749 s
[2025-07-26 19:15:01] 2025-07-26 23:14:28,870 | INFO     | nevents: 400
[2025-07-26 19:15:01] 2025-07-26 23:14:28,870 | INFO     | neventsw: 0
[2025-07-26 19:15:01] 2025-07-26 23:14:28,870 | INFO     | pid: 4203
[2025-07-26 19:15:01] 2025-07-26 23:14:28,871 | INFO     | pgrp: 4203
[2025-07-26 19:15:01] 2025-07-26 23:14:28,871 | INFO     | corecount: 8
[2025-07-26 19:15:01] 2025-07-26 23:14:28,871 | INFO     | event service: False
[2025-07-26 19:15:01] 2025-07-26 23:14:28,871 | INFO     | sizes: {0: 2397475, 2: 2397737, 11: 2397765, 3732: 2423631, 3734: 2432685, 3736: 2432823}
[2025-07-26 19:15:01] 2025-07-26 23:14:28,871 | INFO     | --------------------------------------------------
[2025-07-26 19:15:01] 2025-07-26 23:14:28,871 | INFO     | 
[2025-07-26 19:15:01] 2025-07-26 23:14:28,871 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 19:15:01] 2025-07-26 23:14:28,886 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,886 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,888 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 19:15:01] 2025-07-26 23:14:28,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,888 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 19:15:01] 2025-07-26 23:14:28,889 | INFO     | job 6745350602 has completed (purged errors)
[2025-07-26 19:15:01] 2025-07-26 23:14:28,889 | INFO     | overall cleanup function is called
[2025-07-26 19:15:01] 2025-07-26 23:14:29,893 | INFO     | --- collectZombieJob: --- 10, [4203]
[2025-07-26 19:15:01] 2025-07-26 23:14:29,894 | INFO     | zombie collector waiting for pid 4203
[2025-07-26 19:15:01] 2025-07-26 23:14:29,894 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 19:15:01] 2025-07-26 23:14:29,894 | INFO     | collected zombie processes
[2025-07-26 19:15:01] 2025-07-26 23:14:29,894 | INFO     | will attempt to kill all subprocesses of pid=4203
[2025-07-26 19:15:01] 2025-07-26 23:14:29,997 | INFO     | process IDs to be killed: [4203] (in reverse order)
[2025-07-26 19:15:01] 2025-07-26 23:14:30,038 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 19:15:01] 2025-07-26 23:14:30,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 19:15:01] 2025-07-26 23:14:30,040 | INFO     | did not find any defunct processes belonging to 4203
[2025-07-26 19:15:01] 2025-07-26 23:14:30,041 | INFO     | did not find any defunct processes belonging to 4203
[2025-07-26 19:15:01] 2025-07-26 23:14:30,042 | INFO     | ready for new job
[2025-07-26 19:15:01] 2025-07-26 23:14:30,042 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 19:15:01] 2025-07-26 23:14:30,043 | INFO     | ***************************************
[2025-07-26 19:15:01] 2025-07-26 23:14:30,043 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 19:15:01] 2025-07-26 23:14:30,043 | INFO     | ***************************************
[2025-07-26 19:15:01] 2025-07-26 23:14:30,043 | INFO     | 
[2025-07-26 19:15:01] 2025-07-26 23:14:30,044 | INFO     | architecture information:
[2025-07-26 19:15:01] 2025-07-26 23:14:30,044 | INFO     | executing command: cat /etc/os-release
[2025-07-26 19:15:01] 2025-07-26 23:14:30,055 | INFO     | cat /etc/os-release:
[2025-07-26 19:15:01] NAME="CentOS Linux"
[2025-07-26 19:15:01] VERSION="7 (Core)"
[2025-07-26 19:15:01] ID="centos"
[2025-07-26 19:15:01] ID_LIKE="rhel fedora"
[2025-07-26 19:15:01] VERSION_ID="7"
[2025-07-26 19:15:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 19:15:01] ANSI_COLOR="0;31"
[2025-07-26 19:15:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 19:15:01] HOME_URL="https://www.centos.org/"
[2025-07-26 19:15:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 19:15:01] 
[2025-07-26 19:15:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 19:15:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 19:15:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 19:15:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 19:15:01] 
[2025-07-26 19:15:01] 2025-07-26 23:14:30,055 | INFO     | ***************************************
[2025-07-26 19:15:01] 2025-07-26 23:14:30,557 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 19:15:01] 2025-07-26 23:14:30,574 | INFO     | sufficient remaining disk space (32903266304 B)
[2025-07-26 19:15:01] 2025-07-26 23:14:30,574 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 19:15:01] 2025-07-26 23:14:30,575 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 19:15:01] 2025-07-26 23:14:30,575 | INFO     | update_server=False
[2025-07-26 19:15:01] 2025-07-26 23:14:30,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 19:15:01] 2025-07-26 23:14:30,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:15:01] 2025-07-26 23:14:30,807 | INFO     | all data control threads have been joined
[2025-07-26 19:15:01] 2025-07-26 23:14:31,467 | INFO     | all payload control threads have been joined
[2025-07-26 19:15:01] 2025-07-26 23:14:31,541 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 19:15:01] 2025-07-26 23:14:31,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:15:01] 2025-07-26 23:14:31,544 | INFO     | aborting loop
[2025-07-26 19:15:01] 2025-07-26 23:14:31,575 | INFO     | [job] retrieve thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:31,581 | INFO     | [job] queue monitor thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:31,726 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:31,812 | INFO     | [data] control thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:31,846 | INFO     | [payload] validate_post thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:32,083 | INFO     | all job control threads have been joined
[2025-07-26 19:15:01] 2025-07-26 23:14:32,473 | INFO     | [payload] control thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:32,547 | INFO     | [job] job monitor thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:32,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 19:15:01] 2025-07-26 23:14:32,603 | INFO     | [payload] failed_post thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:32,607 | INFO     | [data] copytool_in thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:32,856 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:32,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:32,974 | INFO     | [job] validate thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:33,069 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:33,088 | INFO     | [job] control thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:33,547 | INFO     | [data] copytool_out thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:36,579 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 19:15:01] 2025-07-26 23:14:37,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594079553344)>', '<ExcThread(monitor, started 140593623701248)>']
[2025-07-26 19:15:01] 2025-07-26 23:14:42,823 | INFO     | all workflow threads have been joined
[2025-07-26 19:15:01] 2025-07-26 23:14:42,823 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 19:15:01] 2025-07-26 23:14:42,824 | INFO     | traces error code: 0
[2025-07-26 19:15:01] 2025-07-26 23:14:42,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 19:15:01] 2025-07-26 23:15:00,853 | INFO     | PID=30011 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 19:15:01] 2025-07-26 23:15:00,853 | INFO     | .. there are 2 such processes running
[2025-07-26 19:15:01] 2025-07-26 23:15:00,854 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 19:15:01] 2025-07-26 23:15:00,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 19:15:01] 2025-07-26 23:15:00,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 19:15:01] 2025-07-26 23:15:00,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 19:15:01] 2025-07-26 23:15:00,854 | INFO     | [monitor] control thread has ended
[2025-07-26 19:15:01] 2025-07-26 23:15:00,944 [wrapper] ==== pilot stdout END ====
[2025-07-26 19:15:01] 2025-07-26 23:15:00,947 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 19:15:01] 2025-07-26 23:15:00,950 [wrapper] pilotpid: 30011
[2025-07-26 19:15:01] 2025-07-26 23:15:00,953 [wrapper] Pilot exit status: 0
[2025-07-26 19:15:01] 2025-07-26 23:15:00,964 [wrapper] pandaids: 6745350602
[2025-07-26 19:15:01] 2025-07-26 23:15:00,993 [wrapper] cleanup supervisor_pilot 15667 30012
[2025-07-26 19:15:01] 2025-07-26 23:15:00,995 [wrapper] Test setup, not cleaning
[2025-07-26 19:15:01] 2025-07-26 23:15:00,998 [wrapper] apfmon messages muted
[2025-07-26 19:15:01] 2025-07-26 23:15:01,001 [wrapper] ==== wrapper stdout END ====
[2025-07-26 19:15:01] 2025-07-26 23:15:01,003 [wrapper] ==== wrapper stderr END ====
[2025-07-26 19:15:01]  *** Error codes and diagnostics ***
[2025-07-26 19:15:01]     "exeErrorCode": 0,
[2025-07-26 19:15:01]     "exeErrorDiag": "",
[2025-07-26 19:15:01]     "pilotErrorCode": 0,
[2025-07-26 19:15:01]     "pilotErrorDiag": "",
[2025-07-26 19:15:01]  *** Listing of results directory ***
[2025-07-26 19:15:01] total 351484
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 13:17 pilot3.tar.gz
[2025-07-26 19:15:01] -rwx------ 1 boincer umatlas     36292 Jul 26 13:21 runpilot2-wrapper.sh
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 13:21 queuedata.json
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas       100 Jul 26 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 19:15:01] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 18:11 run_atlas
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas       105 Jul 26 18:11 job.xml
[2025-07-26 19:15:01] -rw-r--r-- 2 boincer umatlas 144984899 Jul 26 18:11 EVNT.45743347._002344.pool.root.1
[2025-07-26 19:15:01] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 18:11 start_atlas.sh
[2025-07-26 19:15:01] drwxrwx--x 2 boincer umatlas      4096 Jul 26 18:11 shared
[2025-07-26 19:15:01] -rw-r--r-- 2 boincer umatlas    542894 Jul 26 18:11 input.tar.gz
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas         0 Jul 26 18:11 boinc_lockfile
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 18:11 pandaJob.out
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas    980125 Jul 26 18:11 agis_schedconf.cvmfs.json
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas   1593052 Jul 26 18:11 agis_ddmendpoints.agis.ALL.json
[2025-07-26 19:15:01] drwx------ 4 boincer umatlas      4096 Jul 26 18:11 pilot3
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas      6050 Jul 26 19:13 init_data.xml
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas 209685949 Jul 26 19:13 HITS.45743349._041520.pool.root.1
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas       529 Jul 26 19:14 boinc_task_state.xml
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas      1047 Jul 26 19:14 memory_monitor_summary.json
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas    299754 Jul 26 19:14 log.45743349._041520.job.log.tgz.1
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas      7831 Jul 26 19:14 heartbeat.json
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 19:14 boinc_mmap_file
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas        27 Jul 26 19:14 wrapper_checkpoint.txt
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas        95 Jul 26 19:15 pilot_heartbeat.json
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas       820 Jul 26 19:15 pilotlog.txt
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas    386240 Jul 26 19:15 log.45743349._041520.job.log.1
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas       357 Jul 26 19:15 output.list
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas       620 Jul 26 19:15 runtime_log
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas    706560 Jul 26 19:15 result.tar.gz
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas      8660 Jul 26 19:15 runtime_log.err
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas       657 Jul 26 19:15 1ciLDmzlxz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmj70KDmHxHEvm.diag
[2025-07-26 19:15:01] -rw-r--r-- 1 boincer umatlas     21466 Jul 26 19:15 stderr.txt
[2025-07-26 19:15:01] HITS file was successfully produced:
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas 209685949 Jul 26 19:13 shared/HITS.pool.root.1
[2025-07-26 19:15:01]  *** Contents of shared directory: ***
[2025-07-26 19:15:01] total 347604
[2025-07-26 19:15:01] -rw-r--r-- 2 boincer umatlas 144984899 Jul 26 18:11 ATLAS.root_0
[2025-07-26 19:15:01] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 18:11 start_atlas.sh
[2025-07-26 19:15:01] -rw-r--r-- 2 boincer umatlas    542894 Jul 26 18:11 input.tar.gz
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas 209685949 Jul 26 19:13 HITS.pool.root.1
[2025-07-26 19:15:01] -rw------- 1 boincer umatlas    706560 Jul 26 19:15 result.tar.gz
19:15:02 (26421): run_atlas exited; CPU time 27723.544779
19:15:02 (26421): called boinc_finish(0)

</stderr_txt>
]]>

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