Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:53:57 (1092223): wrapper (7.7.26015): starting
17:53:57 (1092223): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 17:53:57] Arguments: --nthreads 8
[2025-07-26 17:53:57] Threads: 8
[2025-07-26 17:53:57] Checking for CVMFS
[2025-07-26 17:53:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 17:53:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 17:53:58] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 17:53:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 17:53:58] 2.13.1.0 1173468 12062 213864 148790 2 65 35810673 40960001 10083 16776704 0 48372464 99.869 24023454 40880 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 17:53:58] CVMFS is ok
[2025-07-26 17:53:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 17:53:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 17:53:58] Further information can be found at the LHC@home message board.
[2025-07-26 17:53:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 17:53:58] Checking for apptainer binary...
[2025-07-26 17:53:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 17:53:58] Running /usr/bin/apptainer --version
[2025-07-26 17:53:58] apptainer version 1.4.1-1.el9
[2025-07-26 17:53:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 17:53:58] c-212-20.aglt2.org
[2025-07-26 17:53:58] apptainer works
[2025-07-26 17:53:58] Set ATHENA_PROC_NUMBER=8
[2025-07-26 17:53:58] Set ATHENA_CORE_NUMBER=8
[2025-07-26 17:53:58] Starting ATLAS job with PandaID=6745263672
[2025-07-26 17:53:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 19:03:46]  *** The last 200 lines of the pilot log: ***
[2025-07-26 19:03:46]  lfn=log.45743349._041117.job.log.tgz.1
[2025-07-26 19:03:46]  mtime=0
[2025-07-26 19:03:46]  protocol_id=None
[2025-07-26 19:03:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 19:03:46]  replicas=None
[2025-07-26 19:03:46]  scope=mc23_13p6TeV
[2025-07-26 19:03:46]  status=None
[2025-07-26 19:03:46]  status_code=0
[2025-07-26 19:03:46]  storage_token=
[2025-07-26 19:03:46]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745263672/log.45743349._041117.job.log.tgz.1
[2025-07-26 19:03:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/3f/log.45743349._041117.job.log.tgz.1
[2025-07-26 19:03:46]  workdir=None
[2025-07-26 19:03:46] ]
[2025-07-26 19:03:46] 2025-07-26 23:03:08,123 | INFO     | transferring file log.45743349._041117.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745263672/log.45743349._041117.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 19:03:46] 2025-07-26 23:03:08,123 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745263672/log.45743349._041117.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._041117.job
[2025-07-26 19:03:46] 2025-07-26 23:03:08,139 | INFO     | adding to output.list: log.45743349._041117.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/3f/log.45743349._041117.job.log.tg
[2025-07-26 19:03:46] 2025-07-26 23:03:08,139 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 19:03:46] 2025-07-26 23:03:08,139 | INFO     | summary of transferred files:
[2025-07-26 19:03:46] 2025-07-26 23:03:08,139 | INFO     |  -- lfn=log.45743349._041117.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 19:03:46] 2025-07-26 23:03:08,140 | INFO     | stage-out finished correctly
[2025-07-26 19:03:46] 2025-07-26 23:03:08,151 | INFO     | monitor loop #307: job 0:6745263672 is in state 'finished'
[2025-07-26 19:03:46] 2025-07-26 23:03:08,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:03:46] 2025-07-26 23:03:10,234 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 19:03:46] 2025-07-26 23:03:10,315 | INFO     | job 6745263672 has state=finished
[2025-07-26 19:03:46] 2025-07-26 23:03:10,315 | INFO     | preparing for final server update for job 6745263672 in state='finished'
[2025-07-26 19:03:46] 2025-07-26 23:03:10,315 | INFO     | this job has now completed (state=finished)
[2025-07-26 19:03:46] 2025-07-26 23:03:10,316 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 19:03:46] 2025-07-26 23:03:10,316 | INFO     | log transfer has been attempted: DONE
[2025-07-26 19:03:46] 2025-07-26 23:03:10,316 | INFO     | job 6745263672 has finished - writing final server update
[2025-07-26 19:03:46] 2025-07-26 23:03:10,316 | INFO     | total number of processed events: 400 (read)
[2025-07-26 19:03:46] 2025-07-26 23:03:10,316 | INFO     | executing command: lscpu
[2025-07-26 19:03:46] 2025-07-26 23:03:10,368 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 19:03:46] 2025-07-26 23:03:10,680 | INFO     | monitor loop #308: job 0:6745263672 is in state 'finished'
[2025-07-26 19:03:46] 2025-07-26 23:03:10,680 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:03:46] 2025-07-26 23:03:13,185 | INFO     | monitor loop #309: job 0:6745263672 is in state 'finished'
[2025-07-26 19:03:46] 2025-07-26 23:03:13,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:03:46] 2025-07-26 23:03:14,066 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 19:03:46] 2025-07-26 23:03:14,076 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3192.690822916667
[2025-07-26 19:03:46] 2025-07-26 23:03:14,088 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745263672/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 19:03:46] 2025-07-26 23:03:14,090 | INFO     | extracted standard info from prmon json
[2025-07-26 19:03:46] 2025-07-26 23:03:14,090 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 19:03:46] 2025-07-26 23:03:14,090 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 19:03:46] 2025-07-26 23:03:14,091 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 19:03:46] 2025-07-26 23:03:14,091 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 19:03:46] 2025-07-26 23:03:14,092 | INFO     | fitting pss+swap vs Time
[2025-07-26 19:03:46] 2025-07-26 23:03:14,092 | INFO     | sum of square deviations: 70364110.0
[2025-07-26 19:03:46] 2025-07-26 23:03:14,092 | INFO     | sum of deviations: -3465998284.0
[2025-07-26 19:03:46] 2025-07-26 23:03:14,093 | INFO     | mean x: 1753569012.0
[2025-07-26 19:03:46] 2025-07-26 23:03:14,093 | INFO     | mean y: 2582217.0
[2025-07-26 19:03:46] 2025-07-26 23:03:14,093 | INFO     | -- intersect: 86379958218.31055
[2025-07-26 19:03:46] 2025-07-26 23:03:14,093 | INFO     | intersect: 86379958218.31055
[2025-07-26 19:03:46] 2025-07-26 23:03:14,093 | INFO     | chi2: 0.03150999918927537
[2025-07-26 19:03:46] 2025-07-26 23:03:14,093 | INFO     | -- intersect: 86379958218.31055
[2025-07-26 19:03:46] 2025-07-26 23:03:14,093 | INFO     | current memory leak: -49.26 B/s (using 61 data points, chi2=0.03)
[2025-07-26 19:03:46] 2025-07-26 23:03:14,093 | INFO     | could have reported an average CPU frequency of 3183 MHz (6 samples)
[2025-07-26 19:03:46] 2025-07-26 23:03:14,093 | INFO     | ..............................
[2025-07-26 19:03:46] 2025-07-26 23:03:14,094 | INFO     | . Timing measurements:
[2025-07-26 19:03:46] 2025-07-26 23:03:14,094 | INFO     | . get job = 0 s
[2025-07-26 19:03:46] 2025-07-26 23:03:14,094 | INFO     | . initial setup = 2 s
[2025-07-26 19:03:46] 2025-07-26 23:03:14,094 | INFO     | . payload setup = 7 s
[2025-07-26 19:03:46] 2025-07-26 23:03:14,094 | INFO     | . stage-in = 0 s
[2025-07-26 19:03:46] 2025-07-26 23:03:14,094 | INFO     | . payload execution = 4111 s
[2025-07-26 19:03:46] 2025-07-26 23:03:14,094 | INFO     | . stage-out = 0 s
[2025-07-26 19:03:46] 2025-07-26 23:03:14,094 | INFO     | . log creation = 0 s
[2025-07-26 19:03:46] 2025-07-26 23:03:14,094 | INFO     | ..............................
[2025-07-26 19:03:46] 2025-07-26 23:03:14,148 | INFO     | 
[2025-07-26 19:03:46] 2025-07-26 23:03:14,148 | INFO     | job summary report
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | --------------------------------------------------
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | PanDA job id: 6745263672
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | task id: 45743349
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | errors: (none)
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | pilot state: finished 
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | transexitcode: 0
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | exeerrorcode: 0
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | exeerrordiag: 
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | exitcode: 0
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | exitmsg: OK
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | cpuconsumptiontime: 30530 s
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | nevents: 400
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | neventsw: 0
[2025-07-26 19:03:46] 2025-07-26 23:03:14,149 | INFO     | pid: 1103161
[2025-07-26 19:03:46] 2025-07-26 23:03:14,150 | INFO     | pgrp: 1103161
[2025-07-26 19:03:46] 2025-07-26 23:03:14,150 | INFO     | corecount: 8
[2025-07-26 19:03:46] 2025-07-26 23:03:14,150 | INFO     | event service: False
[2025-07-26 19:03:46] 2025-07-26 23:03:14,150 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 4123: 2432584, 4125: 2432584, 4129: 2432778}
[2025-07-26 19:03:46] 2025-07-26 23:03:14,150 | INFO     | --------------------------------------------------
[2025-07-26 19:03:46] 2025-07-26 23:03:14,150 | INFO     | 
[2025-07-26 19:03:46] 2025-07-26 23:03:14,150 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 19:03:46] 2025-07-26 23:03:14,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,167 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | job 6745263672 has completed (purged errors)
[2025-07-26 19:03:46] 2025-07-26 23:03:14,168 | INFO     | overall cleanup function is called
[2025-07-26 19:03:46] 2025-07-26 23:03:15,176 | INFO     | --- collectZombieJob: --- 10, [1103161]
[2025-07-26 19:03:46] 2025-07-26 23:03:15,176 | INFO     | zombie collector waiting for pid 1103161
[2025-07-26 19:03:46] 2025-07-26 23:03:15,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 19:03:46] 2025-07-26 23:03:15,176 | INFO     | collected zombie processes
[2025-07-26 19:03:46] 2025-07-26 23:03:15,176 | INFO     | will attempt to kill all subprocesses of pid=1103161
[2025-07-26 19:03:46] 2025-07-26 23:03:15,448 | INFO     | process IDs to be killed: [1103161] (in reverse order)
[2025-07-26 19:03:46] 2025-07-26 23:03:15,538 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 19:03:46] 2025-07-26 23:03:15,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 19:03:46] 2025-07-26 23:03:15,548 | INFO     | did not find any defunct processes belonging to 1103161
[2025-07-26 19:03:46] 2025-07-26 23:03:15,556 | INFO     | did not find any defunct processes belonging to 1103161
[2025-07-26 19:03:46] 2025-07-26 23:03:15,556 | INFO     | ready for new job
[2025-07-26 19:03:46] 2025-07-26 23:03:15,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 19:03:46] 2025-07-26 23:03:15,558 | INFO     | ***************************************
[2025-07-26 19:03:46] 2025-07-26 23:03:15,558 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 19:03:46] 2025-07-26 23:03:15,558 | INFO     | ***************************************
[2025-07-26 19:03:46] 2025-07-26 23:03:15,558 | INFO     | 
[2025-07-26 19:03:46] 2025-07-26 23:03:15,562 | INFO     | architecture information:
[2025-07-26 19:03:46] 2025-07-26 23:03:15,563 | INFO     | executing command: cat /etc/os-release
[2025-07-26 19:03:46] 2025-07-26 23:03:15,576 | INFO     | cat /etc/os-release:
[2025-07-26 19:03:46] NAME="CentOS Linux"
[2025-07-26 19:03:46] VERSION="7 (Core)"
[2025-07-26 19:03:46] ID="centos"
[2025-07-26 19:03:46] ID_LIKE="rhel fedora"
[2025-07-26 19:03:46] VERSION_ID="7"
[2025-07-26 19:03:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 19:03:46] ANSI_COLOR="0;31"
[2025-07-26 19:03:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 19:03:46] HOME_URL="https://www.centos.org/"
[2025-07-26 19:03:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 19:03:46] 
[2025-07-26 19:03:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 19:03:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 19:03:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 19:03:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 19:03:46] 
[2025-07-26 19:03:46] 2025-07-26 23:03:15,576 | INFO     | ***************************************
[2025-07-26 19:03:46] 2025-07-26 23:03:16,079 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 19:03:46] 2025-07-26 23:03:16,098 | INFO     | sufficient remaining disk space (128845873152 B)
[2025-07-26 19:03:46] 2025-07-26 23:03:16,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 19:03:46] 2025-07-26 23:03:16,098 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 19:03:46] 2025-07-26 23:03:16,098 | INFO     | update_server=False
[2025-07-26 19:03:46] 2025-07-26 23:03:16,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 19:03:46] 2025-07-26 23:03:16,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:03:46] 2025-07-26 23:03:16,200 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 19:03:46] 2025-07-26 23:03:16,291 | INFO     | all data control threads have been joined
[2025-07-26 19:03:46] 2025-07-26 23:03:16,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 19:03:46] 2025-07-26 23:03:16,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:03:46] 2025-07-26 23:03:16,693 | INFO     | aborting loop
[2025-07-26 19:03:46] 2025-07-26 23:03:17,103 | INFO     | [job] retrieve thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:17,103 | INFO     | [job] queue monitor thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:17,189 | INFO     | all job control threads have been joined
[2025-07-26 19:03:46] 2025-07-26 23:03:17,271 | INFO     | [payload] failed_post thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:17,296 | INFO     | [data] control thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:17,303 | INFO     | [job] validate thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:17,507 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:17,597 | INFO     | all payload control threads have been joined
[2025-07-26 19:03:46] 2025-07-26 23:03:17,617 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:17,698 | INFO     | [job] job monitor thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:17,702 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:17,989 | INFO     | [data] copytool_in thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:18,194 | INFO     | [job] control thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:18,205 | INFO     | [data] copytool_out thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:18,271 | INFO     | [payload] validate_post thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:18,602 | INFO     | [payload] control thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:20,326 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:26,774 | INFO     | job.realtimelogging is not enabled
[2025-07-26 19:03:46] 2025-07-26 23:03:27,779 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 19:03:46] 2025-07-26 23:03:29,869 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140261038954304)>', '<ExcThread(monitor, started 140260260435712)>']
[2025-07-26 19:03:46] 2025-07-26 23:03:34,894 | INFO     | all workflow threads have been joined
[2025-07-26 19:03:46] 2025-07-26 23:03:34,894 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 19:03:46] 2025-07-26 23:03:34,894 | INFO     | traces error code: 0
[2025-07-26 19:03:46] 2025-07-26 23:03:34,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 19:03:46] 2025-07-26 23:03:46,540 | INFO     | PID=1095887 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 19:03:46] 2025-07-26 23:03:46,540 | INFO     | .. there are 15 such processes running
[2025-07-26 19:03:46] 2025-07-26 23:03:46,541 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 19:03:46] 2025-07-26 23:03:46,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 19:03:46] 2025-07-26 23:03:46,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 19:03:46] 2025-07-26 23:03:46,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 19:03:46] 2025-07-26 23:03:46,541 | INFO     | [monitor] control thread has ended
[2025-07-26 19:03:46] 2025-07-26 23:03:46,631 [wrapper] ==== pilot stdout END ====
[2025-07-26 19:03:46] 2025-07-26 23:03:46,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 19:03:46] 2025-07-26 23:03:46,637 [wrapper] pilotpid: 1095887
[2025-07-26 19:03:46] 2025-07-26 23:03:46,639 [wrapper] Pilot exit status: 0
[2025-07-26 19:03:46] 2025-07-26 23:03:46,651 [wrapper] pandaids: 6745263672
[2025-07-26 19:03:46] 2025-07-26 23:03:46,714 [wrapper] cleanup supervisor_pilot 1196843 1095888
[2025-07-26 19:03:46] 2025-07-26 23:03:46,717 [wrapper] Test setup, not cleaning
[2025-07-26 19:03:46] 2025-07-26 23:03:46,720 [wrapper] apfmon messages muted
[2025-07-26 19:03:46] 2025-07-26 23:03:46,722 [wrapper] ==== wrapper stdout END ====
[2025-07-26 19:03:46] 2025-07-26 23:03:46,725 [wrapper] ==== wrapper stderr END ====
[2025-07-26 19:03:46]  *** Error codes and diagnostics ***
[2025-07-26 19:03:46]     "exeErrorCode": 0,
[2025-07-26 19:03:46]     "exeErrorDiag": "",
[2025-07-26 19:03:46]     "pilotErrorCode": 0,
[2025-07-26 19:03:46]     "pilotErrorDiag": "",
[2025-07-26 19:03:46]  *** Listing of results directory ***
[2025-07-26 19:03:46] total 431172
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 11:50 pilot3.tar.gz
[2025-07-26 19:03:46] -rwx------. 1 boincer umatlas     36292 Jul 26 12:40 runpilot2-wrapper.sh
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 12:40 queuedata.json
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas       100 Jul 26 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 19:03:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 17:53 run_atlas
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas       105 Jul 26 17:53 job.xml
[2025-07-26 19:03:46] -rw-r--r--. 2 boincer umatlas 233479822 Jul 26 17:53 EVNT.45743347._002443.pool.root.1
[2025-07-26 19:03:46] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 17:53 start_atlas.sh
[2025-07-26 19:03:46] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 17:53 shared
[2025-07-26 19:03:46] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 17:53 input.tar.gz
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas         0 Jul 26 17:53 boinc_lockfile
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 17:53 pandaJob.out
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas    980125 Jul 26 17:54 agis_schedconf.cvmfs.json
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas   1593052 Jul 26 17:54 agis_ddmendpoints.agis.ALL.json
[2025-07-26 19:03:46] drwx------. 4 boincer umatlas      4096 Jul 26 17:54 pilot3
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas      6944 Jul 26 19:00 init_data.xml
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas 202706930 Jul 26 19:02 HITS.45743349._041117.pool.root.1
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas       530 Jul 26 19:02 boinc_task_state.xml
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas      1024 Jul 26 19:03 memory_monitor_summary.json
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas    314139 Jul 26 19:03 log.45743349._041117.job.log.tgz.1
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas      7766 Jul 26 19:03 heartbeat.json
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas        27 Jul 26 19:03 wrapper_checkpoint.txt
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 19:03 boinc_mmap_file
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas       823 Jul 26 19:03 pilotlog.txt
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas        95 Jul 26 19:03 pilot_heartbeat.json
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas    416656 Jul 26 19:03 log.45743349._041117.job.log.1
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas       357 Jul 26 19:03 output.list
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas       620 Jul 26 19:03 runtime_log
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas    747520 Jul 26 19:03 result.tar.gz
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 19:03 runtime_log.err
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas       652 Jul 26 19:03 0bQKDmn7wz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMdSLDmUWxjmm.diag
[2025-07-26 19:03:46] -rw-r--r--. 1 boincer umatlas     21629 Jul 26 19:03 stderr.txt
[2025-07-26 19:03:46] HITS file was successfully produced:
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas 202706930 Jul 26 19:02 shared/HITS.pool.root.1
[2025-07-26 19:03:46]  *** Contents of shared directory: ***
[2025-07-26 19:03:46] total 427252
[2025-07-26 19:03:46] -rw-r--r--. 2 boincer umatlas 233479822 Jul 26 17:53 ATLAS.root_0
[2025-07-26 19:03:46] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 17:53 start_atlas.sh
[2025-07-26 19:03:46] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 17:53 input.tar.gz
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas 202706930 Jul 26 19:02 HITS.pool.root.1
[2025-07-26 19:03:46] -rw-------. 1 boincer umatlas    747520 Jul 26 19:03 result.tar.gz
19:03:48 (1092223): run_atlas exited; CPU time 30619.754547
19:03:48 (1092223): called boinc_finish(0)

</stderr_txt>
]]>

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