Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:44:51 (12410): wrapper (7.7.26015): starting
14:44:51 (12410): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 14:44:51] Arguments: --nthreads 8
[2025-07-27 14:44:51] Threads: 8
[2025-07-27 14:44:51] Checking for CVMFS
[2025-07-27 14:44:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 14:44:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 14:44:51] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 14:44:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 14:44:51] 2.11.2.0 25755 109726 136596 148812 1 155 17183355 25165825 4053 130560 0 87442276 99.875 50661827 4007 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 14:44:51] CVMFS is ok
[2025-07-27 14:44:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:44:51] Checking for apptainer binary...
[2025-07-27 14:44:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 14:44:51] Running /usr/bin/apptainer --version
[2025-07-27 14:44:51] apptainer version 1.3.2-1.el7
[2025-07-27 14:44:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:44:53] cg-vwn458.simple-grid.lan
[2025-07-27 14:44:53] apptainer works
[2025-07-27 14:44:53] Set ATHENA_PROC_NUMBER=8
[2025-07-27 14:44:53] Set ATHENA_CORE_NUMBER=8
[2025-07-27 14:44:53] Starting ATLAS job with PandaID=6745228796
[2025-07-27 14:44:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 19:43:08]  *** The last 200 lines of the pilot log: ***
[2025-07-27 19:43:08] 2025-07-27 16:57:03,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 19:43:08] 2025-07-27 16:57:03,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 19:43:08] 2025-07-27 16:57:03,049 | INFO     | fitting pss+swap vs Time
[2025-07-27 19:43:08] 2025-07-27 16:57:03,050 | INFO     | sum of square deviations: 4560048290.0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,052 | INFO     | sum of deviations: -635805744.9999943
[2025-07-27 19:43:08] 2025-07-27 16:57:03,052 | INFO     | mean x: 1753627849.0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,053 | INFO     | mean y: 2490538.9918367346
[2025-07-27 19:43:08] 2025-07-27 16:57:03,053 | INFO     | -- intersect: 246998182.34975004
[2025-07-27 19:43:08] 2025-07-27 16:57:03,053 | INFO     | intersect: 246998182.34975004
[2025-07-27 19:43:08] 2025-07-27 16:57:03,053 | INFO     | chi2: 2.6393123501315454
[2025-07-27 19:43:08] 2025-07-27 16:57:03,054 | INFO     | sum of square deviations: 4286517580.0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,055 | INFO     | sum of deviations: 15486558091.5
[2025-07-27 19:43:08] 2025-07-27 16:57:03,056 | INFO     | mean x: 1753627696.5
[2025-07-27 19:43:08] 2025-07-27 16:57:03,056 | INFO     | mean y: 2499378.129166667
[2025-07-27 19:43:08] 2025-07-27 16:57:03,056 | INFO     | -- intersect: -6333099785.028956
[2025-07-27 19:43:08] 2025-07-27 16:57:03,056 | INFO     | intersect: -6333099785.028956
[2025-07-27 19:43:08] 2025-07-27 16:57:03,056 | INFO     | chi2: 1.8753697603642896
[2025-07-27 19:43:08] 2025-07-27 16:57:03,056 | INFO     | current chi2=1.8753697603642896 (change=28.94475865007718 %)
[2025-07-27 19:43:08] 2025-07-27 16:57:03,057 | INFO     | sum of square deviations: 4024149870.0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,058 | INFO     | sum of deviations: 15124914497.999994
[2025-07-27 19:43:08] 2025-07-27 16:57:03,059 | INFO     | mean x: 1753627544.0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,059 | INFO     | mean y: 2499167.8978723404
[2025-07-27 19:43:08] 2025-07-27 16:57:03,059 | INFO     | -- intersect: -6588574107.496248
[2025-07-27 19:43:08] 2025-07-27 16:57:03,059 | INFO     | intersect: -6588574107.496248
[2025-07-27 19:43:08] 2025-07-27 16:57:03,059 | INFO     | chi2: 1.8761567900997211
[2025-07-27 19:43:08] 2025-07-27 16:57:03,059 | INFO     | current chi2=1.8761567900997211 (change=-0.04196664316900703 %)
[2025-07-27 19:43:08] 2025-07-27 16:57:03,060 | INFO     | right removable region: 234
[2025-07-27 19:43:08] 2025-07-27 16:57:03,060 | INFO     | sum of square deviations: 4286517580.0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,062 | INFO     | sum of deviations: -44550170046.5
[2025-07-27 19:43:08] 2025-07-27 16:57:03,062 | INFO     | mean x: 1753628001.5
[2025-07-27 19:43:08] 2025-07-27 16:57:03,062 | INFO     | mean y: 2514836.3125
[2025-07-27 19:43:08] 2025-07-27 16:57:03,062 | INFO     | -- intersect: 18228131366.999622
[2025-07-27 19:43:08] 2025-07-27 16:57:03,062 | INFO     | intersect: 18228131366.999622
[2025-07-27 19:43:08] 2025-07-27 16:57:03,063 | INFO     | chi2: 0.9460193303766283
[2025-07-27 19:43:08] 2025-07-27 16:57:03,063 | INFO     | current chi2=0.9460193303766283 (change=64.15659820144144 %)
[2025-07-27 19:43:08] 2025-07-27 16:57:03,063 | INFO     | sum of square deviations: 4024149870.0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,065 | INFO     | sum of deviations: -39902787782.0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,065 | INFO     | mean x: 1753628154.0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,065 | INFO     | mean y: 2512112.5617021276
[2025-07-27 19:43:08] 2025-07-27 16:57:03,065 | INFO     | -- intersect: 17391191545.020916
[2025-07-27 19:43:08] 2025-07-27 16:57:03,065 | INFO     | intersect: 17391191545.020916
[2025-07-27 19:43:08] 2025-07-27 16:57:03,066 | INFO     | chi2: 0.9325756643261084
[2025-07-27 19:43:08] 2025-07-27 16:57:03,066 | INFO     | current chi2=0.9325756643261084 (change=1.421077309822809 %)
[2025-07-27 19:43:08] 2025-07-27 16:57:03,066 | INFO     | left removable region: 20
[2025-07-27 19:43:08] 2025-07-27 16:57:03,066 | INFO     | sum of square deviations: 3038856977.5
[2025-07-27 19:43:08] 2025-07-27 16:57:03,068 | INFO     | sum of deviations: -7725548282.5
[2025-07-27 19:43:08] 2025-07-27 16:57:03,068 | INFO     | mean x: 1753628123.5
[2025-07-27 19:43:08] 2025-07-27 16:57:03,068 | INFO     | mean y: 2511592.4813084113
[2025-07-27 19:43:08] 2025-07-27 16:57:03,068 | INFO     | -- intersect: 4460680844.261807
[2025-07-27 19:43:08] 2025-07-27 16:57:03,068 | INFO     | intersect: 4460680844.261807
[2025-07-27 19:43:08] 2025-07-27 16:57:03,069 | INFO     | chi2: 0.08532481847755871
[2025-07-27 19:43:08] 2025-07-27 16:57:03,069 | INFO     | -- intersect: 4460680844.261807
[2025-07-27 19:43:08] 2025-07-27 16:57:03,069 | INFO     | current memory leak: -2.54 B/s (using 214 data points, chi2=0.09)
[2025-07-27 19:43:08] 2025-07-27 16:57:03,070 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2025-07-27 19:43:08] 2025-07-27 16:57:03,070 | INFO     | ..............................
[2025-07-27 19:43:08] 2025-07-27 16:57:03,070 | INFO     | . Timing measurements:
[2025-07-27 19:43:08] 2025-07-27 16:57:03,070 | INFO     | . get job = 0 s
[2025-07-27 19:43:08] 2025-07-27 16:57:03,070 | INFO     | . initial setup = 3 s
[2025-07-27 19:43:08] 2025-07-27 16:57:03,070 | INFO     | . payload setup = 14 s
[2025-07-27 19:43:08] 2025-07-27 16:57:03,070 | INFO     | . stage-in = 0 s
[2025-07-27 19:43:08] 2025-07-27 16:57:03,071 | INFO     | . payload execution = 14934 s
[2025-07-27 19:43:08] 2025-07-27 16:57:03,071 | INFO     | . stage-out = 3 s
[2025-07-27 19:43:08] 2025-07-27 16:57:03,071 | INFO     | . log creation = 1 s
[2025-07-27 19:43:08] 2025-07-27 16:57:03,071 | INFO     | ..............................
[2025-07-27 19:43:08] 2025-07-27 16:57:03,185 | INFO     | 
[2025-07-27 19:43:08] 2025-07-27 16:57:03,186 | INFO     | job summary report
[2025-07-27 19:43:08] 2025-07-27 16:57:03,186 | INFO     | --------------------------------------------------
[2025-07-27 19:43:08] 2025-07-27 16:57:03,186 | INFO     | PanDA job id: 6745228796
[2025-07-27 19:43:08] 2025-07-27 16:57:03,186 | INFO     | task id: 45743349
[2025-07-27 19:43:08] 2025-07-27 16:57:03,186 | INFO     | errors: (none)
[2025-07-27 19:43:08] 2025-07-27 16:57:03,186 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 19:43:08] 2025-07-27 16:57:03,186 | INFO     | pilot state: finished 
[2025-07-27 19:43:08] 2025-07-27 16:57:03,186 | INFO     | transexitcode: 0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,186 | INFO     | exeerrorcode: 0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,186 | INFO     | exeerrordiag: 
[2025-07-27 19:43:08] 2025-07-27 16:57:03,186 | INFO     | exitcode: 0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,187 | INFO     | exitmsg: OK
[2025-07-27 19:43:08] 2025-07-27 16:57:03,187 | INFO     | cpuconsumptiontime: 56692 s
[2025-07-27 19:43:08] 2025-07-27 16:57:03,187 | INFO     | nevents: 400
[2025-07-27 19:43:08] 2025-07-27 16:57:03,187 | INFO     | neventsw: 0
[2025-07-27 19:43:08] 2025-07-27 16:57:03,187 | INFO     | pid: 32114
[2025-07-27 19:43:08] 2025-07-27 16:57:03,187 | INFO     | pgrp: 32114
[2025-07-27 19:43:08] 2025-07-27 16:57:03,187 | INFO     | corecount: 8
[2025-07-27 19:43:08] 2025-07-27 16:57:03,187 | INFO     | event service: False
[2025-07-27 19:43:08] 2025-07-27 16:57:03,187 | INFO     | sizes: {0: 2397303, 1: 2397502, 12: 2397502, 23: 2397530, 26: 2397820, 33: 2397848, 14953: 2428362, 14954: 2428361, 14958: 2437417, 14959: 2437473, 15058: 2437667}
[2025-07-27 19:43:08] 2025-07-27 16:57:03,187 | INFO     | --------------------------------------------------
[2025-07-27 19:43:08] 2025-07-27 16:57:03,187 | INFO     | 
[2025-07-27 19:43:08] 2025-07-27 16:57:03,188 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-07-27 19:43:08] 2025-07-27 16:57:03,781 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,781 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,781 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,781 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,781 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,782 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,782 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,782 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,782 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,782 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,782 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,783 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,783 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 19:43:08] 2025-07-27 16:57:03,783 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,783 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 19:43:08] 2025-07-27 16:57:03,783 | INFO     | job 6745228796 has completed (purged errors)
[2025-07-27 19:43:08] 2025-07-27 16:57:03,783 | INFO     | overall cleanup function is called
[2025-07-27 19:43:08] 2025-07-27 16:57:04,792 | INFO     | --- collectZombieJob: --- 10, [32114]
[2025-07-27 19:43:08] 2025-07-27 16:57:04,792 | INFO     | zombie collector waiting for pid 32114
[2025-07-27 19:43:08] 2025-07-27 16:57:04,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 19:43:08] 2025-07-27 16:57:04,793 | INFO     | collected zombie processes
[2025-07-27 19:43:08] 2025-07-27 16:57:04,793 | INFO     | will attempt to kill all subprocesses of pid=32114
[2025-07-27 19:43:08] 2025-07-27 16:57:04,894 | INFO     | process IDs to be killed: [32114] (in reverse order)
[2025-07-27 19:43:08] 2025-07-27 16:57:05,843 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 19:43:08] 2025-07-27 16:57:05,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 19:43:08] 2025-07-27 16:57:05,846 | INFO     | did not find any defunct processes belonging to 32114
[2025-07-27 19:43:08] 2025-07-27 16:57:05,849 | INFO     | did not find any defunct processes belonging to 32114
[2025-07-27 19:43:08] 2025-07-27 16:57:05,849 | INFO     | ready for new job
[2025-07-27 19:43:08] 2025-07-27 16:57:05,849 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 19:43:08] 2025-07-27 16:57:05,851 | INFO     | ***************************************
[2025-07-27 19:43:08] 2025-07-27 16:57:05,851 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 19:43:08] 2025-07-27 16:57:05,852 | INFO     | ***************************************
[2025-07-27 19:43:08] 2025-07-27 16:57:05,852 | INFO     | 
[2025-07-27 19:43:08] 2025-07-27 16:57:05,855 | INFO     | pilot is running in a VM
[2025-07-27 19:43:08] 2025-07-27 16:57:05,855 | INFO     | architecture information:
[2025-07-27 19:43:08] 2025-07-27 16:57:05,868 | INFO     | executing command: cat /etc/os-release
[2025-07-27 19:43:08] 2025-07-27 16:57:06,147 | INFO     | cat /etc/os-release:
[2025-07-27 19:43:08] NAME="CentOS Linux"
[2025-07-27 19:43:08] VERSION="7 (Core)"
[2025-07-27 19:43:08] ID="centos"
[2025-07-27 19:43:08] ID_LIKE="rhel fedora"
[2025-07-27 19:43:08] VERSION_ID="7"
[2025-07-27 19:43:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 19:43:08] ANSI_COLOR="0;31"
[2025-07-27 19:43:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 19:43:08] HOME_URL="https://www.centos.org/"
[2025-07-27 19:43:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 19:43:08] 
[2025-07-27 19:43:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 19:43:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 19:43:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 19:43:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 19:43:08] 
[2025-07-27 19:43:08] 2025-07-27 16:57:06,147 | INFO     | ***************************************
[2025-07-27 19:43:08] 2025-07-27 16:57:06,650 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-07-27 19:43:08] 2025-07-27 16:57:06,886 | INFO     | sufficient remaining disk space (496932749312 B)
[2025-07-27 19:43:08] 2025-07-27 16:57:06,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 19:43:08] 2025-07-27 16:57:06,886 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 19:43:08] 2025-07-27 16:57:06,886 | INFO     | update_server=False
[2025-07-27 19:43:08] 2025-07-27 16:57:06,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 19:43:08] 2025-07-27 16:57:06,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 19:43:08] 2025-07-27 16:57:06,928 | INFO     | all data control threads have been joined
[2025-07-27 19:43:08] 2025-07-27 16:57:07,234 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:43:08] 2025-07-27 16:57:07,235 | INFO     | aborting loop
[2025-07-27 19:43:08] 2025-07-27 16:57:07,747 | INFO     | all payload control threads have been joined
[2025-07-27 19:43:08] 2025-07-27 16:57:07,892 | INFO     | [job] retrieve thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:07,934 | INFO     | [data] control thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:07,954 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:08,039 | INFO     | [data] copytool_in thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:08,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 19:43:08] 2025-07-27 16:57:08,205 | INFO     | [payload] failed_post thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:08,240 | INFO     | [job] job monitor thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:08,248 | INFO     | all job control threads have been joined
[2025-07-27 19:43:08] 2025-07-27 16:57:08,508 | INFO     | [job] validate thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:08,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 19:43:08] 2025-07-27 16:57:08,628 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:08,749 | INFO     | [payload] validate_post thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:08,755 | INFO     | [payload] control thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:08,894 | INFO     | [data] copytool_out thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:09,132 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:09,158 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:09,206 | INFO     | [job] queue monitor thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:09,254 | INFO     | [job] control thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:12,626 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 19:43:08] 2025-07-27 16:57:13,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375149983552)>', '<ExcThread(monitor, started 140374496507648)>']
[2025-07-27 19:43:08] 2025-07-27 16:57:19,000 | INFO     | all workflow threads have been joined
[2025-07-27 19:43:08] 2025-07-27 16:57:19,000 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 19:43:08] 2025-07-27 16:57:19,001 | INFO     | traces error code: 0
[2025-07-27 19:43:08] 2025-07-27 16:57:19,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 19:43:08] 2025-07-27 16:57:35,171 | INFO     | PID=18151 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 19:43:08] 2025-07-27 16:57:35,171 | INFO     | .. there are 9 such processes running
[2025-07-27 19:43:08] 2025-07-27 16:57:35,172 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 19:43:08] 2025-07-27 16:57:35,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 19:43:08] 2025-07-27 16:57:35,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 19:43:08] 2025-07-27 16:57:35,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 19:43:08] 2025-07-27 16:57:35,172 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 19:43:08] 2025-07-27 16:57:35,173 | INFO     | [monitor] control thread has ended
[2025-07-27 19:43:08] 2025-07-27 16:57:35,429 [wrapper] ==== pilot stdout END ====
[2025-07-27 19:43:08] 2025-07-27 16:57:35,456 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 19:43:08] 2025-07-27 16:57:35,488 [wrapper] pilotpid: 18151
[2025-07-27 19:43:08] 2025-07-27 16:57:35,535 [wrapper] Pilot exit status: 0
[2025-07-27 19:43:08] 2025-07-27 16:57:35,999 [wrapper] pandaids: 6745228796
[2025-07-27 19:43:08] 2025-07-27 16:57:36,989 [wrapper] cleanup supervisor_pilot 12931 18152
[2025-07-27 19:43:08] 2025-07-27 16:57:37,108 [wrapper] Test setup, not cleaning
[2025-07-27 19:43:08] 2025-07-27 16:57:37,214 [wrapper] apfmon messages muted
[2025-07-27 19:43:08] 2025-07-27 16:57:37,302 [wrapper] ==== wrapper stdout END ====
[2025-07-27 19:43:08] 2025-07-27 16:57:37,393 [wrapper] ==== wrapper stderr END ====
[2025-07-27 19:43:08]  *** Error codes and diagnostics ***
[2025-07-27 19:43:08]     "exeErrorCode": 0,
[2025-07-27 19:43:08]     "exeErrorDiag": "",
[2025-07-27 19:43:08]     "pilotErrorCode": 0,
[2025-07-27 19:43:08]     "pilotErrorDiag": "",
[2025-07-27 19:43:08]  *** Listing of results directory ***
[2025-07-27 19:43:08] total 389800
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc    530466 Jul 26 15:41 pilot3.tar.gz
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc      5112 Jul 26 15:51 queuedata.json
[2025-07-27 19:43:08] -rwx------. 1 boinc boinc     36292 Jul 26 15:52 runpilot2-wrapper.sh
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc       100 Jul 27 14:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 19:43:08] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 14:44 run_atlas
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc       105 Jul 27 14:44 job.xml
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc      6392 Jul 27 14:44 init_data.xml
[2025-07-27 19:43:08] -rw-r--r--. 2 boinc boinc 186895305 Jul 27 14:44 EVNT.45743347._002218.pool.root.1
[2025-07-27 19:43:08] -rw-r--r--. 2 boinc boinc     15095 Jul 27 14:44 start_atlas.sh
[2025-07-27 19:43:08] drwxrwx--x. 2 boinc boinc        68 Jul 27 14:44 shared
[2025-07-27 19:43:08] -rw-r--r--. 2 boinc boinc    542891 Jul 27 14:44 input.tar.gz
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc         0 Jul 27 14:44 boinc_lockfile
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc      2562 Jul 27 14:44 pandaJob.out
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc    980117 Jul 27 14:45 agis_schedconf.cvmfs.json
[2025-07-27 19:43:08] drwx------. 4 boinc boinc      4096 Jul 27 14:45 pilot3
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc 205014649 Jul 27 18:54 HITS.45743349._038882.pool.root.1
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc       530 Jul 27 18:54 boinc_task_state.xml
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc      1020 Jul 27 18:55 memory_monitor_summary.json
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc   1593052 Jul 27 18:55 agis_ddmendpoints.agis.ALL.json
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc    382808 Jul 27 18:55 log.45743349._038882.job.log.tgz.1
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc      7776 Jul 27 18:57 heartbeat.json
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc        95 Jul 27 18:57 pilot_heartbeat.json
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc       890 Jul 27 18:57 pilotlog.txt
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc   1307602 Jul 27 18:57 log.45743349._038882.job.log.1
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc       357 Jul 27 18:57 output.list
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc       620 Jul 27 18:57 runtime_log
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc   1710080 Jul 27 18:57 result.tar.gz
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc       656 Jul 27 18:57 xDPODmVVuz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFISLDm8hWmOm.diag
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc      8674 Jul 27 18:57 runtime_log.err
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc      8192 Jul 27 19:43 boinc_mmap_file
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc        28 Jul 27 19:43 wrapper_checkpoint.txt
[2025-07-27 19:43:08] -rw-r--r--. 1 boinc boinc     20603 Jul 27 19:43 stderr.txt
[2025-07-27 19:43:08] HITS file was successfully produced:
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc 205014649 Jul 27 18:54 shared/HITS.pool.root.1
[2025-07-27 19:43:08]  *** Contents of shared directory: ***
[2025-07-27 19:43:08] total 384948
[2025-07-27 19:43:08] -rw-r--r--. 2 boinc boinc 186895305 Jul 27 14:44 ATLAS.root_0
[2025-07-27 19:43:08] -rw-r--r--. 2 boinc boinc     15095 Jul 27 14:44 start_atlas.sh
[2025-07-27 19:43:08] -rw-r--r--. 2 boinc boinc    542891 Jul 27 14:44 input.tar.gz
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc 205014649 Jul 27 18:54 HITS.pool.root.1
[2025-07-27 19:43:08] -rw-------. 1 boinc boinc   1710080 Jul 27 18:57 result.tar.gz
19:43:10 (12410): run_atlas exited; CPU time 56872.253572
19:43:10 (12410): called boinc_finish(0)

</stderr_txt>
]]>

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