Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-28 05:27:38 (6924): Detected: vboxwrapper 26206
2025-07-28 05:27:38 (6924): Detected: BOINC client v8.0.2
2025-07-28 05:27:40 (6924): Detected: VirtualBox VboxManage Interface (Version: 6.1.8)
2025-07-28 05:27:40 (6924): Successfully copied 'init_data.xml' to the shared directory.
2025-07-28 05:27:40 (6924): Create VM. (boinc_5069745b57f2fa70, slot#7)
2025-07-28 05:27:41 (6924): Setting Memory Size for VM. (4700MB)
2025-07-28 05:27:41 (6924): Setting CPU Count for VM. (7)
2025-07-28 05:27:42 (6924): Setting Chipset Options for VM.
2025-07-28 05:27:42 (6924): Setting Graphics Controller Options for VM.
2025-07-28 05:27:42 (6924): Setting Boot Options for VM.
2025-07-28 05:27:42 (6924): Setting Network Configuration for NAT.
2025-07-28 05:27:43 (6924): Enabling VM Network Access.
2025-07-28 05:27:43 (6924): Disabling USB Support for VM.
2025-07-28 05:27:43 (6924): Disabling COM Port Support for VM.
2025-07-28 05:27:43 (6924): Disabling LPT Port Support for VM.
2025-07-28 05:27:44 (6924): Disabling Audio Support for VM.
2025-07-28 05:27:44 (6924): Disabling Clipboard Support for VM.
2025-07-28 05:27:44 (6924): Disabling Drag and Drop Support for VM.
2025-07-28 05:27:44 (6924): Adding storage controller(s) to VM.
2025-07-28 05:27:45 (6924): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-28 05:27:46 (6924): Adding VirtualBox Guest Additions to VM.
2025-07-28 05:27:46 (6924): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-28 05:27:46 (6924): forwarding host port 56139 to guest port 80
2025-07-28 05:27:47 (6924): Enabling remote desktop for VM.
2025-07-28 05:27:47 (6924): Enabling shared directory for VM.
2025-07-28 05:27:48 (6924): Starting VM using VBoxManage interface. (boinc_5069745b57f2fa70, slot#7)
2025-07-28 05:27:54 (6924): Successfully started VM. (PID = '2968')
2025-07-28 05:27:54 (6924): Reporting VM Process ID to BOINC.
2025-07-28 05:27:54 (6924): Guest Log: BIOS: VirtualBox 6.1.8
2025-07-28 05:27:54 (6924): Guest Log: CPUID EDX: 0x178bfbff
2025-07-28 05:27:54 (6924): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-28 05:27:54 (6924): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-28 05:27:54 (6924): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-28 05:27:54 (6924): Detected: Web Application Enabled (http://localhost:56139)
2025-07-28 05:27:54 (6924): Detected: Remote Desktop Enabled (localhost:56140)
2025-07-28 05:27:54 (6924): Preference change detected
2025-07-28 05:27:54 (6924): Setting CPU throttle for VM. (80%)
2025-07-28 05:27:54 (6924): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-28 05:27:56 (6924): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-28 05:27:56 (6924): Guest Log: BIOS: Booting from Hard Disk...
2025-07-28 05:27:59 (6924): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-28 05:27:59 (6924): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-28 05:27:59 (6924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-28 05:28:11 (6924): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-28 05:28:11 (6924): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-28 05:28:24 (6924): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-28 05:28:24 (6924): Guest Log: 00:00:00.000288 main     Log opened 2025-07-28T05:28:22.932065000Z
2025-07-28 05:28:24 (6924): Guest Log: 00:00:00.000440 main     OS Product: Linux
2025-07-28 05:28:24 (6924): Guest Log: 00:00:00.000504 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-28 05:28:24 (6924): Guest Log: 00:00:00.000559 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-28 05:28:24 (6924): Guest Log: 00:00:00.000613 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-28 05:28:24 (6924): Guest Log: 00:00:00.000614 main     Process ID: 1354
2025-07-28 05:28:24 (6924): Guest Log: 00:00:00.000616 main     Package type: LINUX_64BITS_GENERIC
2025-07-28 05:28:24 (6924): Guest Log: 00:00:00.003505 main     5.2.32 r132073 started. Verbose level = 0
2025-07-28 05:28:24 (6924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-28 05:28:24 (6924): Guest Log: [INFO] Mounting shared directory
2025-07-28 05:28:25 (6924): Guest Log: [INFO] Checking for init_data.xml
2025-07-28 05:28:29 (6924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-28 05:28:29 (6924): Guest Log: [INFO] Detected branch: prod
2025-07-28 05:28:29 (6924): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-28 05:28:29 (6924): Guest Log: Copying input files
2025-07-28 05:28:31 (6924): Guest Log: Copied input files into RunAtlas.
2025-07-28 05:28:31 (6924): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-28 05:28:31 (6924): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-28 05:28:31 (6924): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-28 05:28:31 (6924): Guest Log: Further information can be found at the LHC@home message board.
2025-07-28 05:28:34 (6924): Guest Log: 00:00:10.018471 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 743 168 000ns (GuestNow=1 753 673 314 195 513 000 ns GuestLast=1 753 680 502 938 681 000 ns fSetTimeLastLoop=true )
2025-07-28 05:28:41 (6924): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-28 05:28:43 (6924): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-28 05:28:43 (6924): Guest Log: 2.6.3.0 1630 0 32040 148834 3 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-28 05:28:44 (6924): Guest Log: copied the webapp to /var/www
2025-07-28 05:28:44 (6924): Guest Log: ATHENA_PROC_NUMBER=7
2025-07-28 05:28:44 (6924): Guest Log: ATHENA_CORE_NUMBER=7
2025-07-28 05:28:44 (6924): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-28 05:28:45 (6924): Guest Log:  *** Starting ATLAS job. (PandaID=6745262249 taskID=45743349) ***
2025-07-28 07:08:00 (6924): Status Report: Elapsed Time: '6000.000000'
2025-07-28 07:08:00 (6924): Status Report: CPU Time: '22361.125000'
2025-07-28 08:48:08 (6924): Status Report: Elapsed Time: '12000.000000'
2025-07-28 08:48:08 (6924): Status Report: CPU Time: '32882.687500'
2025-07-28 10:28:16 (6924): Status Report: Elapsed Time: '18000.000000'
2025-07-28 10:28:16 (6924): Status Report: CPU Time: '43566.828125'
2025-07-28 12:08:29 (6924): Status Report: Elapsed Time: '24000.000000'
2025-07-28 12:08:29 (6924): Status Report: CPU Time: '58043.843750'
2025-07-28 13:48:44 (6924): Status Report: Elapsed Time: '30000.000000'
2025-07-28 13:48:44 (6924): Status Report: CPU Time: '75206.312500'
2025-07-28 15:28:59 (6924): Status Report: Elapsed Time: '36000.000000'
2025-07-28 15:28:59 (6924): Status Report: CPU Time: '94154.187500'
2025-07-28 17:09:18 (6924): Status Report: Elapsed Time: '42000.000000'
2025-07-28 17:09:19 (6924): Status Report: CPU Time: '111092.203125'
2025-07-28 18:36:22 (6924): Guest Log:  *** Job finished ***
2025-07-28 18:36:22 (6924): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-28 18:36:22 (6924): Guest Log: 2025-07-28 16:35:57,705 | INFO     | all workflow threads have been joined
2025-07-28 18:36:22 (6924): Guest Log: 2025-07-28 16:35:57,705 | INFO     | end of generic workflow (traces error code: 0)
2025-07-28 18:36:22 (6924): Guest Log: 2025-07-28 16:35:57,706 | INFO     | traces error code: 0
2025-07-28 18:36:22 (6924): Guest Log: 2025-07-28 16:35:57,707 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:18,565 | INFO     | PID=5973 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:18,567 | INFO     | found 0 job(s) in 20 queues
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:18,567 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:18,567 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:18,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:18,568 | INFO     | [monitor] control thread has ended
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:18,916 [wrapper] ==== pilot stdout END ====
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:18,956 [wrapper] ==== wrapper stdout RESUME ====
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:19,001 [wrapper] pilotpid: 5973
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:19,034 [wrapper] Pilot exit status: 0
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:19,183 [wrapper] pandaids: 6745262249
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:19,364 [wrapper] cleanup supervisor_pilot 26573 5974
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:19,391 [wrapper] Test setup, not cleaning
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:19,408 [wrapper] apfmon messages muted
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:19,440 [wrapper] ==== wrapper stdout END ====
2025-07-28 18:36:23 (6924): Guest Log: 2025-07-28 16:36:19,461 [wrapper] ==== wrapper stderr END ====
2025-07-28 18:36:23 (6924): Guest Log:  *** Error codes and diagnostics ***
2025-07-28 18:36:23 (6924): Guest Log:     "exeErrorCode": 0,
2025-07-28 18:36:23 (6924): Guest Log:     "exeErrorDiag": "",
2025-07-28 18:36:23 (6924): Guest Log:     "pilotErrorCode": 0,
2025-07-28 18:36:23 (6924): Guest Log:     "pilotErrorDiag": "",
2025-07-28 18:36:23 (6924): Guest Log:  *** Listing of results directory ***
2025-07-28 18:36:23 (6924): Guest Log: total 215312
2025-07-28 18:36:23 (6924): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 26 15:50 pilot3.tar.gz
2025-07-28 18:36:23 (6924): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 26 16:19 queuedata.json
2025-07-28 18:36:23 (6924): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 26 16:20 runpilot2-wrapper.sh
2025-07-28 18:36:23 (6924): Guest Log: -rwxr-xr-x. 1 atlas atlas     11337 Jul 28 03:28 init_data.xml
2025-07-28 18:36:23 (6924): Guest Log: -rwxr-xr-x. 1 atlas atlas    542885 Jul 28 03:28 input.tar.gz
2025-07-28 18:36:23 (6924): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 28 03:28 start_atlas.sh
2025-07-28 18:36:23 (6924): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 28 03:28 EVNT.45743347._002329.pool.root.1 -> /data/./ATLAS.root_0
2025-07-28 18:36:23 (6924): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 28 03:28 pandaJob.out
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas    980117 Jul 28 03:29 agis_schedconf.cvmfs.json
2025-07-28 18:36:23 (6924): Guest Log: drwx------. 4 atlas atlas      4096 Jul 28 03:29 pilot3
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas 208786237 Jul 28 16:32 HITS.45743349._040755.pool.root.1
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas      1033 Jul 28 16:34 memory_monitor_summary.json
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas   1589827 Jul 28 16:34 agis_ddmendpoints.agis.ALL.json
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas    617661 Jul 28 16:34 log.45743349._040755.job.log.tgz.1
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas        95 Jul 28 16:35 pilot_heartbeat.json
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas      7838 Jul 28 16:35 heartbeat.json
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas       744 Jul 28 16:36 pilotlog.txt
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas   3320927 Jul 28 16:36 log.45743349._040755.job.log.1
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas       357 Jul 28 16:36 output.list
2025-07-28 18:36:23 (6924): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 28 16:36 runtime_log
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas   3962880 Jul 28 16:36 result.tar.gz
2025-07-28 18:36:23 (6924): Guest Log: -rw-r--r--. 1 atlas atlas      8588 Jul 28 16:36 runtime_log.err
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas       660 Jul 28 16:36 QnqLDmgowz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJZSLDmNTVTsm.diag
2025-07-28 18:36:23 (6924): Guest Log: Looking for outputfile HITS.45743349._040755.pool.root.1
2025-07-28 18:36:23 (6924): Guest Log: HITS file was successfully produced
2025-07-28 18:36:23 (6924): Guest Log: -rw-------. 1 atlas atlas 208786237 Jul 28 16:32 /home/atlas/RunAtlas/HITS.45743349._040755.pool.root.1
2025-07-28 18:36:27 (6924): Guest Log: Successfully finished the ATLAS job!
2025-07-28 18:36:28 (6924): Guest Log: Copying the results back to the shared directory!
2025-07-28 18:36:28 (6924): Guest Log:  *** Contents of shared directory: ***
2025-07-28 18:36:28 (6924): Guest Log: total 354252
2025-07-28 18:36:28 (6924): Guest Log: -rwxrwxrwx. 1 root root 149422331 Jul 28 03:27 ATLAS.root_0
2025-07-28 18:36:28 (6924): Guest Log: -rwxrwxrwx. 1 root root 208786237 Jul 28 16:36 HITS.pool.root.1
2025-07-28 18:36:28 (6924): Guest Log: -rwxrwxrwx. 1 root root     11337 Jul 28 03:27 init_data.xml
2025-07-28 18:36:28 (6924): Guest Log: -rwxrwxrwx. 1 root root    542885 Jul 26 21:46 input.tar.gz
2025-07-28 18:36:28 (6924): Guest Log: -rwxrwxrwx. 1 root root   3962880 Jul 28 16:36 result.tar.gz
2025-07-28 18:36:28 (6924): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 26 21:46 start_atlas.sh
2025-07-28 18:36:28 (6924): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-28 18:36:28 (6924): VM Completion File Detected.
2025-07-28 18:36:28 (6924): Powering off VM.
2025-07-28 18:36:30 (6924): Successfully stopped VM.
2025-07-28 18:36:30 (6924): Deregistering VM. (boinc_5069745b57f2fa70, slot#7)
2025-07-28 18:36:30 (6924): Removing network bandwidth throttle group from VM.
2025-07-28 18:36:31 (6924): Removing VM from VirtualBox.
18:36:36 (6924): called boinc_finish(0)

</stderr_txt>
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