Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:47:02 (1578762): wrapper (7.7.26015): starting
17:47:02 (1578762): wrapper: running run_atlas (--nthreads 10)
[2025-07-26 17:47:02] Arguments: --nthreads 10
[2025-07-26 17:47:02] Threads: 10
[2025-07-26 17:47:02] Checking for CVMFS
[2025-07-26 17:47:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 17:47:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 17:47:02] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 17:47:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 17:47:03] 2.13.0.0 215257 17846 292816 148790 3 319 20589687 32935937 10981 16776704 0 49299257 99.543 63430992 25261 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 17:47:03] CVMFS is ok
[2025-07-26 17:47:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 17:47:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 17:47:03] Further information can be found at the LHC@home message board.
[2025-07-26 17:47:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 17:47:03] Checking for apptainer binary...
[2025-07-26 17:47:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 17:47:03] Running /usr/bin/apptainer --version
[2025-07-26 17:47:03] apptainer version 1.4.1-1.el9
[2025-07-26 17:47:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 17:47:03] c-5-1.aglt2.org
[2025-07-26 17:47:03] apptainer works
[2025-07-26 17:47:03] Set ATHENA_PROC_NUMBER=10
[2025-07-26 17:47:03] Set ATHENA_CORE_NUMBER=10
[2025-07-26 17:47:03] Starting ATLAS job with PandaID=6745262244
[2025-07-26 17:47:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 19:28:05]  *** The last 200 lines of the pilot log: ***
[2025-07-26 19:28:05]  status=None
[2025-07-26 19:28:05]  status_code=0
[2025-07-26 19:28:05]  storage_token=
[2025-07-26 19:28:05]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745262244/log.45743349._040750.job.log.tgz.1
[2025-07-26 19:28:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/ac/log.45743349._040750.job.log.tgz.1
[2025-07-26 19:28:05]  workdir=None
[2025-07-26 19:28:05] ]
[2025-07-26 19:28:05] 2025-07-26 23:27:23,416 | INFO     | transferring file log.45743349._040750.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745262244/log.45743349._040750.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 19:28:05] 2025-07-26 23:27:23,417 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745262244/log.45743349._040750.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._040750.job
[2025-07-26 19:28:05] 2025-07-26 23:27:23,433 | INFO     | adding to output.list: log.45743349._040750.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/ac/log.45743349._040750.job.log.tg
[2025-07-26 19:28:05] 2025-07-26 23:27:23,434 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 19:28:05] 2025-07-26 23:27:23,434 | INFO     | summary of transferred files:
[2025-07-26 19:28:05] 2025-07-26 23:27:23,434 | INFO     |  -- lfn=log.45743349._040750.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 19:28:05] 2025-07-26 23:27:23,434 | INFO     | stage-out finished correctly
[2025-07-26 19:28:05] 2025-07-26 23:27:24,043 | INFO     | monitor loop #438: job 0:6745262244 is in state 'finished'
[2025-07-26 19:28:05] 2025-07-26 23:27:24,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:28:05] 2025-07-26 23:27:26,130 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 19:28:05] 2025-07-26 23:27:26,546 | INFO     | monitor loop #439: job 0:6745262244 is in state 'finished'
[2025-07-26 19:28:05] 2025-07-26 23:27:26,547 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:28:05] 2025-07-26 23:27:26,601 | INFO     | PID=1582338 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 19:28:05] 2025-07-26 23:27:26,602 | INFO     | .. there are 18 such processes running
[2025-07-26 19:28:05] 2025-07-26 23:27:27,790 | INFO     | job 6745262244 has state=finished
[2025-07-26 19:28:05] 2025-07-26 23:27:27,790 | INFO     | preparing for final server update for job 6745262244 in state='finished'
[2025-07-26 19:28:05] 2025-07-26 23:27:27,791 | INFO     | this job has now completed (state=finished)
[2025-07-26 19:28:05] 2025-07-26 23:27:27,791 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 19:28:05] 2025-07-26 23:27:27,791 | INFO     | log transfer has been attempted: DONE
[2025-07-26 19:28:05] 2025-07-26 23:27:27,791 | INFO     | job 6745262244 has finished - writing final server update
[2025-07-26 19:28:05] 2025-07-26 23:27:27,792 | INFO     | total number of processed events: 400 (read)
[2025-07-26 19:28:05] 2025-07-26 23:27:27,792 | INFO     | executing command: lscpu
[2025-07-26 19:28:05] 2025-07-26 23:27:27,844 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 19:28:05] 2025-07-26 23:27:29,050 | INFO     | monitor loop #440: job 0:6745262244 is in state 'finished'
[2025-07-26 19:28:05] 2025-07-26 23:27:29,051 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:28:05] 2025-07-26 23:27:31,557 | INFO     | monitor loop #441: job 0:6745262244 is in state 'finished'
[2025-07-26 19:28:05] 2025-07-26 23:27:31,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:28:05] 2025-07-26 23:27:31,765 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 19:28:05] 2025-07-26 23:27:31,773 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2720.1531499999983
[2025-07-26 19:28:05] 2025-07-26 23:27:31,779 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745262244/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 19:28:05] 2025-07-26 23:27:31,780 | INFO     | extracted standard info from prmon json
[2025-07-26 19:28:05] 2025-07-26 23:27:31,780 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 19:28:05] 2025-07-26 23:27:31,780 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 19:28:05] 2025-07-26 23:27:31,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 19:28:05] 2025-07-26 23:27:31,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 19:28:05] 2025-07-26 23:27:31,784 | INFO     | fitting pss+swap vs Time
[2025-07-26 19:28:05] 2025-07-26 23:27:31,784 | INFO     | sum of square deviations: 233641590.0
[2025-07-26 19:28:05] 2025-07-26 23:27:31,785 | INFO     | sum of deviations: -12074926087.999998
[2025-07-26 19:28:05] 2025-07-26 23:27:31,785 | INFO     | mean x: 1753569515.0
[2025-07-26 19:28:05] 2025-07-26 23:27:31,785 | INFO     | mean y: 2365052.3736263737
[2025-07-26 19:28:05] 2025-07-26 23:27:31,785 | INFO     | -- intersect: 90629304732.91168
[2025-07-26 19:28:05] 2025-07-26 23:27:31,785 | INFO     | intersect: 90629304732.91168
[2025-07-26 19:28:05] 2025-07-26 23:27:31,785 | INFO     | chi2: 0.24554831591327195
[2025-07-26 19:28:05] 2025-07-26 23:27:31,785 | INFO     | -- intersect: 90629304732.91168
[2025-07-26 19:28:05] 2025-07-26 23:27:31,785 | INFO     | current memory leak: -51.68 B/s (using 91 data points, chi2=0.25)
[2025-07-26 19:28:05] 2025-07-26 23:27:31,786 | INFO     | could have reported an average CPU frequency of 2683 MHz (7 samples)
[2025-07-26 19:28:05] 2025-07-26 23:27:31,786 | INFO     | ..............................
[2025-07-26 19:28:05] 2025-07-26 23:27:31,786 | INFO     | . Timing measurements:
[2025-07-26 19:28:05] 2025-07-26 23:27:31,786 | INFO     | . get job = 0 s
[2025-07-26 19:28:05] 2025-07-26 23:27:31,786 | INFO     | . initial setup = 2 s
[2025-07-26 19:28:05] 2025-07-26 23:27:31,786 | INFO     | . payload setup = 7 s
[2025-07-26 19:28:05] 2025-07-26 23:27:31,786 | INFO     | . stage-in = 0 s
[2025-07-26 19:28:05] 2025-07-26 23:27:31,786 | INFO     | . payload execution = 5978 s
[2025-07-26 19:28:05] 2025-07-26 23:27:31,786 | INFO     | . stage-out = 0 s
[2025-07-26 19:28:05] 2025-07-26 23:27:31,786 | INFO     | . log creation = 0 s
[2025-07-26 19:28:05] 2025-07-26 23:27:31,786 | INFO     | ..............................
[2025-07-26 19:28:05] 2025-07-26 23:27:31,892 | INFO     | 
[2025-07-26 19:28:05] 2025-07-26 23:27:31,892 | INFO     | job summary report
[2025-07-26 19:28:05] 2025-07-26 23:27:31,892 | INFO     | --------------------------------------------------
[2025-07-26 19:28:05] 2025-07-26 23:27:31,892 | INFO     | PanDA job id: 6745262244
[2025-07-26 19:28:05] 2025-07-26 23:27:31,892 | INFO     | task id: 45743349
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | errors: (none)
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | pilot state: finished 
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | transexitcode: 0
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | exeerrorcode: 0
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | exeerrordiag: 
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | exitcode: 0
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | exitmsg: OK
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | cpuconsumptiontime: 54992 s
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | nevents: 400
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | neventsw: 0
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | pid: 1590276
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | pgrp: 1590276
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | corecount: 10
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | event service: False
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 5990: 2424437, 5991: 2433435, 5994: 2433491, 6000: 2433813}
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | --------------------------------------------------
[2025-07-26 19:28:05] 2025-07-26 23:27:31,893 | INFO     | 
[2025-07-26 19:28:05] 2025-07-26 23:27:31,894 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 19:28:05] 2025-07-26 23:27:31,914 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,915 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,915 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,915 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,916 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,916 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,916 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,916 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,917 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 19:28:05] 2025-07-26 23:27:31,917 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,917 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 19:28:05] 2025-07-26 23:27:31,917 | INFO     | job 6745262244 has completed (purged errors)
[2025-07-26 19:28:05] 2025-07-26 23:27:31,917 | INFO     | overall cleanup function is called
[2025-07-26 19:28:05] 2025-07-26 23:27:32,925 | INFO     | --- collectZombieJob: --- 10, [1590276]
[2025-07-26 19:28:05] 2025-07-26 23:27:32,926 | INFO     | zombie collector waiting for pid 1590276
[2025-07-26 19:28:05] 2025-07-26 23:27:32,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 19:28:05] 2025-07-26 23:27:32,926 | INFO     | collected zombie processes
[2025-07-26 19:28:05] 2025-07-26 23:27:32,926 | INFO     | will attempt to kill all subprocesses of pid=1590276
[2025-07-26 19:28:05] 2025-07-26 23:27:33,287 | INFO     | process IDs to be killed: [1590276] (in reverse order)
[2025-07-26 19:28:05] 2025-07-26 23:27:33,383 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 19:28:05] 2025-07-26 23:27:33,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 19:28:05] 2025-07-26 23:27:33,396 | INFO     | did not find any defunct processes belonging to 1590276
[2025-07-26 19:28:05] 2025-07-26 23:27:33,410 | INFO     | did not find any defunct processes belonging to 1590276
[2025-07-26 19:28:05] 2025-07-26 23:27:33,411 | INFO     | ready for new job
[2025-07-26 19:28:05] 2025-07-26 23:27:33,411 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 19:28:05] 2025-07-26 23:27:33,414 | INFO     | ***************************************
[2025-07-26 19:28:05] 2025-07-26 23:27:33,414 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 19:28:05] 2025-07-26 23:27:33,414 | INFO     | ***************************************
[2025-07-26 19:28:05] 2025-07-26 23:27:33,414 | INFO     | 
[2025-07-26 19:28:05] 2025-07-26 23:27:33,428 | INFO     | architecture information:
[2025-07-26 19:28:05] 2025-07-26 23:27:33,429 | INFO     | executing command: cat /etc/os-release
[2025-07-26 19:28:05] 2025-07-26 23:27:33,444 | INFO     | cat /etc/os-release:
[2025-07-26 19:28:05] NAME="CentOS Linux"
[2025-07-26 19:28:05] VERSION="7 (Core)"
[2025-07-26 19:28:05] ID="centos"
[2025-07-26 19:28:05] ID_LIKE="rhel fedora"
[2025-07-26 19:28:05] VERSION_ID="7"
[2025-07-26 19:28:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 19:28:05] ANSI_COLOR="0;31"
[2025-07-26 19:28:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 19:28:05] HOME_URL="https://www.centos.org/"
[2025-07-26 19:28:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 19:28:05] 
[2025-07-26 19:28:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 19:28:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 19:28:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 19:28:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 19:28:05] 
[2025-07-26 19:28:05] 2025-07-26 23:27:33,445 | INFO     | ***************************************
[2025-07-26 19:28:05] 2025-07-26 23:27:33,948 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 19:28:05] 2025-07-26 23:27:33,965 | INFO     | sufficient remaining disk space (76688654336 B)
[2025-07-26 19:28:05] 2025-07-26 23:27:33,966 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 19:28:05] 2025-07-26 23:27:33,966 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 19:28:05] 2025-07-26 23:27:33,966 | INFO     | update_server=False
[2025-07-26 19:28:05] 2025-07-26 23:27:33,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 19:28:05] 2025-07-26 23:27:34,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 19:28:05] 2025-07-26 23:27:34,060 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 19:28:05] 2025-07-26 23:27:34,061 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 19:28:05] 2025-07-26 23:27:34,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:28:05] 2025-07-26 23:27:34,061 | INFO     | will abort loop
[2025-07-26 19:28:05] 2025-07-26 23:27:34,700 | INFO     | all data control threads have been joined
[2025-07-26 19:28:05] 2025-07-26 23:27:34,972 | INFO     | [job] retrieve thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:35,035 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:35,065 | INFO     | [job] job monitor thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:35,105 | INFO     | all payload control threads have been joined
[2025-07-26 19:28:05] 2025-07-26 23:27:35,151 | INFO     | all job control threads have been joined
[2025-07-26 19:28:05] 2025-07-26 23:27:35,261 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:35,678 | INFO     | [data] copytool_in thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:35,706 | INFO     | [data] control thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:36,023 | INFO     | [data] copytool_out thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:36,070 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:36,111 | INFO     | [payload] control thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:36,156 | INFO     | [job] control thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:36,200 | INFO     | [job] validate thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:36,276 | INFO     | [payload] failed_post thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:36,313 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:36,454 | INFO     | [payload] validate_post thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:36,740 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 19:28:05] 2025-07-26 23:27:36,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:28:05] 2025-07-26 23:27:37,906 | INFO     | [job] queue monitor thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:40,746 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 19:28:05] 2025-07-26 23:27:41,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139638896154432)>', '<ExcThread(monitor, started 139638043834112)>']
[2025-07-26 19:28:05] 2025-07-26 23:27:46,152 | INFO     | all workflow threads have been joined
[2025-07-26 19:28:05] 2025-07-26 23:27:46,152 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 19:28:05] 2025-07-26 23:27:46,153 | INFO     | traces error code: 0
[2025-07-26 19:28:05] 2025-07-26 23:27:46,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 19:28:05] 2025-07-26 23:28:05,130 | INFO     | PID=1582338 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 19:28:05] 2025-07-26 23:28:05,130 | INFO     | .. there are 18 such processes running
[2025-07-26 19:28:05] 2025-07-26 23:28:05,131 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 19:28:05] 2025-07-26 23:28:05,131 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 19:28:05] 2025-07-26 23:28:05,131 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 19:28:05] 2025-07-26 23:28:05,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 19:28:05] 2025-07-26 23:28:05,131 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 19:28:05] 2025-07-26 23:28:05,131 | INFO     | [monitor] control thread has ended
[2025-07-26 19:28:05] 2025-07-26 23:28:05,294 [wrapper] ==== pilot stdout END ====
[2025-07-26 19:28:05] 2025-07-26 23:28:05,298 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 19:28:05] 2025-07-26 23:28:05,300 [wrapper] pilotpid: 1582338
[2025-07-26 19:28:05] 2025-07-26 23:28:05,303 [wrapper] Pilot exit status: 0
[2025-07-26 19:28:05] 2025-07-26 23:28:05,313 [wrapper] pandaids: 6745262244
[2025-07-26 19:28:05] 2025-07-26 23:28:05,374 [wrapper] cleanup supervisor_pilot 1815413 1582339
[2025-07-26 19:28:05] 2025-07-26 23:28:05,377 [wrapper] Test setup, not cleaning
[2025-07-26 19:28:05] 2025-07-26 23:28:05,380 [wrapper] apfmon messages muted
[2025-07-26 19:28:05] 2025-07-26 23:28:05,383 [wrapper] ==== wrapper stdout END ====
[2025-07-26 19:28:05] 2025-07-26 23:28:05,386 [wrapper] ==== wrapper stderr END ====
[2025-07-26 19:28:05]  *** Error codes and diagnostics ***
[2025-07-26 19:28:05]     "exeErrorCode": 0,
[2025-07-26 19:28:05]     "exeErrorDiag": "",
[2025-07-26 19:28:05]     "pilotErrorCode": 0,
[2025-07-26 19:28:05]     "pilotErrorDiag": "",
[2025-07-26 19:28:05]  *** Listing of results directory ***
[2025-07-26 19:28:05] total 361276
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 11:50 pilot3.tar.gz
[2025-07-26 19:28:05] -rwx------. 1 boincer umatlas     36292 Jul 26 12:19 runpilot2-wrapper.sh
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 12:19 queuedata.json
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas       100 Jul 26 17:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 19:28:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 17:47 run_atlas
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas       105 Jul 26 17:47 job.xml
[2025-07-26 19:28:05] -rw-r--r--. 2 boincer umatlas 149422331 Jul 26 17:47 EVNT.45743347._002329.pool.root.1
[2025-07-26 19:28:05] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 17:47 start_atlas.sh
[2025-07-26 19:28:05] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 17:47 shared
[2025-07-26 19:28:05] -rw-r--r--. 2 boincer umatlas    542886 Jul 26 17:47 input.tar.gz
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas         0 Jul 26 17:47 boinc_lockfile
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 17:47 pandaJob.out
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas    980125 Jul 26 17:47 agis_schedconf.cvmfs.json
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas   1593052 Jul 26 17:47 agis_ddmendpoints.agis.ALL.json
[2025-07-26 19:28:05] drwx------. 4 boincer umatlas      4096 Jul 26 17:47 pilot3
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas      6657 Jul 26 19:20 init_data.xml
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas 214803096 Jul 26 19:26 HITS.45743349._040750.pool.root.1
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas       530 Jul 26 19:26 boinc_task_state.xml
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas      1039 Jul 26 19:27 memory_monitor_summary.json
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas    344593 Jul 26 19:27 log.45743349._040750.job.log.tgz.1
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas        95 Jul 26 19:27 pilot_heartbeat.json
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas      7815 Jul 26 19:27 heartbeat.json
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 19:27 boinc_mmap_file
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas        27 Jul 26 19:27 wrapper_checkpoint.txt
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas       893 Jul 26 19:28 pilotlog.txt
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas    577316 Jul 26 19:28 log.45743349._040750.job.log.1
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas       357 Jul 26 19:28 output.list
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas       620 Jul 26 19:28 runtime_log
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas    942080 Jul 26 19:28 result.tar.gz
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas      8647 Jul 26 19:28 runtime_log.err
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas       650 Jul 26 19:28 qDlNDmrnwz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFZSLDmQODU4n.diag
[2025-07-26 19:28:05] -rw-r--r--. 1 boincer umatlas     22106 Jul 26 19:28 stderr.txt
[2025-07-26 19:28:05] HITS file was successfully produced:
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas 214803096 Jul 26 19:26 shared/HITS.pool.root.1
[2025-07-26 19:28:05]  *** Contents of shared directory: ***
[2025-07-26 19:28:05] total 357168
[2025-07-26 19:28:05] -rw-r--r--. 2 boincer umatlas 149422331 Jul 26 17:47 ATLAS.root_0
[2025-07-26 19:28:05] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 17:47 start_atlas.sh
[2025-07-26 19:28:05] -rw-r--r--. 2 boincer umatlas    542886 Jul 26 17:47 input.tar.gz
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas 214803096 Jul 26 19:26 HITS.pool.root.1
[2025-07-26 19:28:05] -rw-------. 1 boincer umatlas    942080 Jul 26 19:28 result.tar.gz
19:28:06 (1578762): run_atlas exited; CPU time 55159.356767
19:28:06 (1578762): called boinc_finish(0)

</stderr_txt>
]]>

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