Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:34:14 (5154): wrapper (7.7.26015): starting
08:34:14 (5154): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 08:34:14] Arguments: --nthreads 8
[2025-07-27 08:34:14] Threads: 8
[2025-07-27 08:34:14] Checking for CVMFS
[2025-07-27 08:34:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 08:34:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 08:34:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 08:34:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 08:34:15] 2.11.2.0 25395 109193 137596 148803 2 109 17989776 25165824 4353 130560 0 83718313 99.867 49127019 3566 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 08:34:15] CVMFS is ok
[2025-07-27 08:34:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 08:34:15] Checking for apptainer binary...
[2025-07-27 08:34:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 08:34:15] Running /usr/bin/apptainer --version
[2025-07-27 08:34:16] apptainer version 1.3.2-1.el7
[2025-07-27 08:34:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 08:34:17] cg-vwn454.simple-grid.lan
[2025-07-27 08:34:17] apptainer works
[2025-07-27 08:34:17] Set ATHENA_PROC_NUMBER=8
[2025-07-27 08:34:17] Set ATHENA_CORE_NUMBER=8
[2025-07-27 08:34:17] Starting ATLAS job with PandaID=6745262230
[2025-07-27 08:34:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:18:18]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:18:18] 2025-07-27 10:59:27,501 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:18:18] 2025-07-27 10:59:27,501 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:18:18] 2025-07-27 10:59:27,506 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:18:18] 2025-07-27 10:59:27,507 | INFO     | sum of square deviations: 5325139844.5
[2025-07-27 15:18:18] 2025-07-27 10:59:27,509 | INFO     | sum of deviations: -19355275234.0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,509 | INFO     | mean x: 1753605977.5
[2025-07-27 15:18:18] 2025-07-27 10:59:27,509 | INFO     | mean y: 2509848.3720930233
[2025-07-27 15:18:18] 2025-07-27 10:59:27,509 | INFO     | -- intersect: 6376338017.702926
[2025-07-27 15:18:18] 2025-07-27 10:59:27,509 | INFO     | intersect: 6376338017.702926
[2025-07-27 15:18:18] 2025-07-27 10:59:27,531 | INFO     | chi2: 2.581243057970326
[2025-07-27 15:18:18] 2025-07-27 10:59:27,531 | INFO     | sum of square deviations: 5021496942.0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,533 | INFO     | sum of deviations: -1903668113.9999938
[2025-07-27 15:18:18] 2025-07-27 10:59:27,534 | INFO     | mean x: 1753605825.0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,534 | INFO     | mean y: 2518477.517786561
[2025-07-27 15:18:18] 2025-07-27 10:59:27,534 | INFO     | -- intersect: 667316949.3948909
[2025-07-27 15:18:18] 2025-07-27 10:59:27,534 | INFO     | intersect: 667316949.3948909
[2025-07-27 15:18:18] 2025-07-27 10:59:27,534 | INFO     | chi2: 1.8108737390973693
[2025-07-27 15:18:18] 2025-07-27 10:59:27,534 | INFO     | current chi2=1.8108737390973693 (change=29.84489649257249 %)
[2025-07-27 15:18:18] 2025-07-27 10:59:27,535 | INFO     | sum of square deviations: 4729621702.0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,537 | INFO     | sum of deviations: -1934737457.499993
[2025-07-27 15:18:18] 2025-07-27 10:59:27,537 | INFO     | mean x: 1753605672.5
[2025-07-27 15:18:18] 2025-07-27 10:59:27,537 | INFO     | mean y: 2518461.294354839
[2025-07-27 15:18:18] 2025-07-27 10:59:27,537 | INFO     | -- intersect: 719862636.7990314
[2025-07-27 15:18:18] 2025-07-27 10:59:27,537 | INFO     | intersect: 719862636.7990314
[2025-07-27 15:18:18] 2025-07-27 10:59:27,538 | INFO     | chi2: 1.8106575179640971
[2025-07-27 15:18:18] 2025-07-27 10:59:27,538 | INFO     | current chi2=1.8106575179640971 (change=0.011940155108765756 %)
[2025-07-27 15:18:18] 2025-07-27 10:59:27,538 | INFO     | right removable region: 247
[2025-07-27 15:18:18] 2025-07-27 10:59:27,538 | INFO     | sum of square deviations: 5021496942.0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,540 | INFO     | sum of deviations: -62695081786.0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,540 | INFO     | mean x: 1753606130.0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,540 | INFO     | mean y: 2531447.4980237153
[2025-07-27 15:18:18] 2025-07-27 10:59:27,541 | INFO     | -- intersect: 21896895022.872864
[2025-07-27 15:18:18] 2025-07-27 10:59:27,541 | INFO     | intersect: 21896895022.872864
[2025-07-27 15:18:18] 2025-07-27 10:59:27,541 | INFO     | chi2: 1.0195375555767545
[2025-07-27 15:18:18] 2025-07-27 10:59:27,541 | INFO     | current chi2=1.0195375555767545 (change=60.50207079768638 %)
[2025-07-27 15:18:18] 2025-07-27 10:59:27,542 | INFO     | sum of square deviations: 4729621702.0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,544 | INFO     | sum of deviations: -64927067577.00001
[2025-07-27 15:18:18] 2025-07-27 10:59:27,544 | INFO     | mean x: 1753606282.5
[2025-07-27 15:18:18] 2025-07-27 10:59:27,544 | INFO     | mean y: 2532596.35483871
[2025-07-27 15:18:18] 2025-07-27 10:59:27,544 | INFO     | -- intersect: 24075602448.682167
[2025-07-27 15:18:18] 2025-07-27 10:59:27,544 | INFO     | intersect: 24075602448.682167
[2025-07-27 15:18:18] 2025-07-27 10:59:27,544 | INFO     | chi2: 0.996286981259188
[2025-07-27 15:18:18] 2025-07-27 10:59:27,544 | INFO     | current chi2=0.996286981259188 (change=2.2805019972426224 %)
[2025-07-27 15:18:18] 2025-07-27 10:59:27,544 | INFO     | left removable region: 20
[2025-07-27 15:18:18] 2025-07-27 10:59:27,545 | INFO     | sum of square deviations: 3627000098.0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,546 | INFO     | sum of deviations: -31982377591.999996
[2025-07-27 15:18:18] 2025-07-27 10:59:27,547 | INFO     | mean x: 1753606252.0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,547 | INFO     | mean y: 2533901.193832599
[2025-07-27 15:18:18] 2025-07-27 10:59:27,547 | INFO     | -- intersect: 15465587605.019758
[2025-07-27 15:18:18] 2025-07-27 10:59:27,547 | INFO     | intersect: 15465587605.019758
[2025-07-27 15:18:18] 2025-07-27 10:59:27,547 | INFO     | chi2: 0.17643983556003787
[2025-07-27 15:18:18] 2025-07-27 10:59:27,547 | INFO     | -- intersect: 15465587605.019758
[2025-07-27 15:18:18] 2025-07-27 10:59:27,547 | INFO     | current memory leak: -8.82 B/s (using 227 data points, chi2=0.18)
[2025-07-27 15:18:18] 2025-07-27 10:59:27,548 | INFO     | could have reported an average CPU frequency of 2250 MHz (12 samples)
[2025-07-27 15:18:18] 2025-07-27 10:59:27,548 | INFO     | ..............................
[2025-07-27 15:18:18] 2025-07-27 10:59:27,548 | INFO     | . Timing measurements:
[2025-07-27 15:18:18] 2025-07-27 10:59:27,549 | INFO     | . get job = 0 s
[2025-07-27 15:18:18] 2025-07-27 10:59:27,549 | INFO     | . initial setup = 2 s
[2025-07-27 15:18:18] 2025-07-27 10:59:27,549 | INFO     | . payload setup = 15 s
[2025-07-27 15:18:18] 2025-07-27 10:59:27,549 | INFO     | . stage-in = 0 s
[2025-07-27 15:18:18] 2025-07-27 10:59:27,549 | INFO     | . payload execution = 15752 s
[2025-07-27 15:18:18] 2025-07-27 10:59:27,549 | INFO     | . stage-out = 3 s
[2025-07-27 15:18:18] 2025-07-27 10:59:27,549 | INFO     | . log creation = 1 s
[2025-07-27 15:18:18] 2025-07-27 10:59:27,549 | INFO     | ..............................
[2025-07-27 15:18:18] 2025-07-27 10:59:27,675 | INFO     | 
[2025-07-27 15:18:18] 2025-07-27 10:59:27,675 | INFO     | job summary report
[2025-07-27 15:18:18] 2025-07-27 10:59:27,675 | INFO     | --------------------------------------------------
[2025-07-27 15:18:18] 2025-07-27 10:59:27,675 | INFO     | PanDA job id: 6745262230
[2025-07-27 15:18:18] 2025-07-27 10:59:27,675 | INFO     | task id: 45743349
[2025-07-27 15:18:18] 2025-07-27 10:59:27,675 | INFO     | errors: (none)
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | pilot state: finished 
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | transexitcode: 0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | exeerrorcode: 0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | exeerrordiag: 
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | exitcode: 0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | exitmsg: OK
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | cpuconsumptiontime: 60505 s
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | nevents: 400
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | neventsw: 0
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | pid: 15720
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | pgrp: 15720
[2025-07-27 15:18:18] 2025-07-27 10:59:27,676 | INFO     | corecount: 8
[2025-07-27 15:18:18] 2025-07-27 10:59:27,677 | INFO     | event service: False
[2025-07-27 15:18:18] 2025-07-27 10:59:27,677 | INFO     | sizes: {0: 2397248, 1: 2397503, 2: 2397503, 10: 2397793, 12: 2397821, 15771: 2428854, 15775: 2437908, 15868: 2438046}
[2025-07-27 15:18:18] 2025-07-27 10:59:27,677 | INFO     | --------------------------------------------------
[2025-07-27 15:18:18] 2025-07-27 10:59:27,677 | INFO     | 
[2025-07-27 15:18:18] 2025-07-27 10:59:27,677 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-27 15:18:18] 2025-07-27 10:59:28,089 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,090 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,091 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,091 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:18:18] 2025-07-27 10:59:28,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,091 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:18:18] 2025-07-27 10:59:28,091 | INFO     | job 6745262230 has completed (purged errors)
[2025-07-27 15:18:18] 2025-07-27 10:59:28,092 | INFO     | overall cleanup function is called
[2025-07-27 15:18:18] 2025-07-27 10:59:29,101 | INFO     | --- collectZombieJob: --- 10, [15720]
[2025-07-27 15:18:18] 2025-07-27 10:59:29,101 | INFO     | zombie collector waiting for pid 15720
[2025-07-27 15:18:18] 2025-07-27 10:59:29,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:18:18] 2025-07-27 10:59:29,101 | INFO     | collected zombie processes
[2025-07-27 15:18:18] 2025-07-27 10:59:29,101 | INFO     | will attempt to kill all subprocesses of pid=15720
[2025-07-27 15:18:18] 2025-07-27 10:59:29,214 | INFO     | process IDs to be killed: [15720] (in reverse order)
[2025-07-27 15:18:18] 2025-07-27 10:59:30,024 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:18:18] 2025-07-27 10:59:30,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:18:18] 2025-07-27 10:59:30,028 | INFO     | did not find any defunct processes belonging to 15720
[2025-07-27 15:18:18] 2025-07-27 10:59:30,037 | INFO     | did not find any defunct processes belonging to 15720
[2025-07-27 15:18:18] 2025-07-27 10:59:30,037 | INFO     | ready for new job
[2025-07-27 15:18:18] 2025-07-27 10:59:30,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:18:18] 2025-07-27 10:59:30,039 | INFO     | ***************************************
[2025-07-27 15:18:18] 2025-07-27 10:59:30,040 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:18:18] 2025-07-27 10:59:30,040 | INFO     | ***************************************
[2025-07-27 15:18:18] 2025-07-27 10:59:30,040 | INFO     | 
[2025-07-27 15:18:18] 2025-07-27 10:59:30,040 | INFO     | pilot is running in a VM
[2025-07-27 15:18:18] 2025-07-27 10:59:30,040 | INFO     | architecture information:
[2025-07-27 15:18:18] 2025-07-27 10:59:30,054 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:18:18] 2025-07-27 10:59:30,282 | INFO     | cat /etc/os-release:
[2025-07-27 15:18:18] NAME="CentOS Linux"
[2025-07-27 15:18:18] VERSION="7 (Core)"
[2025-07-27 15:18:18] ID="centos"
[2025-07-27 15:18:18] ID_LIKE="rhel fedora"
[2025-07-27 15:18:18] VERSION_ID="7"
[2025-07-27 15:18:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:18:18] ANSI_COLOR="0;31"
[2025-07-27 15:18:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:18:18] HOME_URL="https://www.centos.org/"
[2025-07-27 15:18:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:18:18] 
[2025-07-27 15:18:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:18:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:18:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:18:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:18:18] 
[2025-07-27 15:18:18] 2025-07-27 10:59:30,283 | INFO     | ***************************************
[2025-07-27 15:18:18] 2025-07-27 10:59:30,787 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-27 15:18:18] 2025-07-27 10:59:31,094 | INFO     | sufficient remaining disk space (496887660544 B)
[2025-07-27 15:18:18] 2025-07-27 10:59:31,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:18:18] 2025-07-27 10:59:31,095 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:18:18] 2025-07-27 10:59:31,095 | INFO     | update_server=False
[2025-07-27 15:18:18] 2025-07-27 10:59:31,095 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:18:18] 2025-07-27 10:59:31,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:18:18] 2025-07-27 10:59:31,102 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:18:18] 2025-07-27 10:59:31,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:18:18] 2025-07-27 10:59:31,104 | INFO     | aborting loop
[2025-07-27 15:18:18] 2025-07-27 10:59:31,116 | INFO     | all job control threads have been joined
[2025-07-27 15:18:18] 2025-07-27 10:59:31,528 | INFO     | all payload control threads have been joined
[2025-07-27 15:18:18] 2025-07-27 10:59:31,677 | INFO     | all data control threads have been joined
[2025-07-27 15:18:18] 2025-07-27 10:59:32,101 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:32,110 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:32,122 | INFO     | [job] control thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:32,349 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:32,536 | INFO     | [payload] control thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:32,550 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:32,675 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:32,683 | INFO     | [data] control thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:32,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:18:18] 2025-07-27 10:59:33,069 | INFO     | [job] validate thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:33,109 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:33,258 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:33,276 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:33,313 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:33,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:33,698 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:35,105 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:18:18] 2025-07-27 10:59:36,389 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731681359680)>', '<ExcThread(monitor, started 139731224475392)>']
[2025-07-27 15:18:18] 2025-07-27 10:59:41,415 | INFO     | all workflow threads have been joined
[2025-07-27 15:18:18] 2025-07-27 10:59:41,415 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:18:18] 2025-07-27 10:59:41,415 | INFO     | traces error code: 0
[2025-07-27 15:18:18] 2025-07-27 10:59:41,416 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:18:18] 2025-07-27 10:59:59,870 | INFO     | PID=9183 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 15:18:18] 2025-07-27 10:59:59,871 | INFO     | .. there are 9 such processes running
[2025-07-27 15:18:18] 2025-07-27 10:59:59,872 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:18:18] 2025-07-27 10:59:59,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:18:18] 2025-07-27 10:59:59,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:18:18] 2025-07-27 10:59:59,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:18:18] 2025-07-27 10:59:59,872 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 15:18:18] 2025-07-27 10:59:59,872 | INFO     | [monitor] control thread has ended
[2025-07-27 15:18:18] 2025-07-27 11:00:00,139 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:18:18] 2025-07-27 11:00:00,177 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:18:18] 2025-07-27 11:00:00,226 [wrapper] pilotpid: 9183
[2025-07-27 15:18:18] 2025-07-27 11:00:00,273 [wrapper] Pilot exit status: 0
[2025-07-27 15:18:18] 2025-07-27 11:00:00,748 [wrapper] pandaids: 6745262230
[2025-07-27 15:18:18] 2025-07-27 11:00:01,642 [wrapper] cleanup supervisor_pilot 25376 9184
[2025-07-27 15:18:18] 2025-07-27 11:00:01,751 [wrapper] Test setup, not cleaning
[2025-07-27 15:18:18] 2025-07-27 11:00:01,808 [wrapper] apfmon messages muted
[2025-07-27 15:18:18] 2025-07-27 11:00:01,860 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:18:18] 2025-07-27 11:00:01,910 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:18:18]  *** Error codes and diagnostics ***
[2025-07-27 15:18:18]     "exeErrorCode": 0,
[2025-07-27 15:18:18]     "exeErrorDiag": "",
[2025-07-27 15:18:18]     "pilotErrorCode": 0,
[2025-07-27 15:18:18]     "pilotErrorDiag": "",
[2025-07-27 15:18:18]  *** Listing of results directory ***
[2025-07-27 15:18:18] total 361648
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc    530466 Jul 26 17:50 pilot3.tar.gz
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc      5112 Jul 26 18:17 queuedata.json
[2025-07-27 15:18:18] -rwx------. 1 boinc boinc     36292 Jul 26 18:18 runpilot2-wrapper.sh
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc       100 Jul 27 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:18:18] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 08:34 run_atlas
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc       105 Jul 27 08:34 job.xml
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc      6391 Jul 27 08:34 init_data.xml
[2025-07-27 15:18:18] -rw-r--r--. 2 boinc boinc 143152656 Jul 27 08:34 EVNT.45743347._002328.pool.root.1
[2025-07-27 15:18:18] -rw-r--r--. 2 boinc boinc     15095 Jul 27 08:34 start_atlas.sh
[2025-07-27 15:18:18] drwxrwx--x. 2 boinc boinc        68 Jul 27 08:34 shared
[2025-07-27 15:18:18] -rw-r--r--. 2 boinc boinc    542891 Jul 27 08:34 input.tar.gz
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc         0 Jul 27 08:34 boinc_lockfile
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc      2563 Jul 27 08:34 pandaJob.out
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc    980125 Jul 27 08:34 agis_schedconf.cvmfs.json
[2025-07-27 15:18:18] drwx------. 4 boinc boinc      4096 Jul 27 08:34 pilot3
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc 219789651 Jul 27 12:56 HITS.45743349._040736.pool.root.1
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc       530 Jul 27 12:56 boinc_task_state.xml
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc      1016 Jul 27 12:57 memory_monitor_summary.json
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc   1593052 Jul 27 12:57 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc    395582 Jul 27 12:57 log.45743349._040736.job.log.tgz.1
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc      7772 Jul 27 12:59 heartbeat.json
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc        95 Jul 27 12:59 pilot_heartbeat.json
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc       889 Jul 27 12:59 pilotlog.txt
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc   1366823 Jul 27 13:00 log.45743349._040736.job.log.1
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc       357 Jul 27 13:00 output.list
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc       620 Jul 27 13:00 runtime_log
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc   1781760 Jul 27 13:00 result.tar.gz
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc       657 Jul 27 13:00 sUFLDmymwz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnYSLDmTuvion.diag
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc      8660 Jul 27 13:00 runtime_log.err
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc      8192 Jul 27 15:18 boinc_mmap_file
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc        28 Jul 27 15:18 wrapper_checkpoint.txt
[2025-07-27 15:18:18] -rw-r--r--. 1 boinc boinc     20559 Jul 27 15:18 stderr.txt
[2025-07-27 15:18:18] HITS file was successfully produced:
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc 219789651 Jul 27 12:56 shared/HITS.pool.root.1
[2025-07-27 15:18:18]  *** Contents of shared directory: ***
[2025-07-27 15:18:18] total 356728
[2025-07-27 15:18:18] -rw-r--r--. 2 boinc boinc 143152656 Jul 27 08:34 ATLAS.root_0
[2025-07-27 15:18:18] -rw-r--r--. 2 boinc boinc     15095 Jul 27 08:34 start_atlas.sh
[2025-07-27 15:18:18] -rw-r--r--. 2 boinc boinc    542891 Jul 27 08:34 input.tar.gz
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc 219789651 Jul 27 12:56 HITS.pool.root.1
[2025-07-27 15:18:18] -rw-------. 1 boinc boinc   1781760 Jul 27 13:00 result.tar.gz
15:18:20 (5154): run_atlas exited; CPU time 60694.900128
15:18:20 (5154): called boinc_finish(0)

</stderr_txt>
]]>

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