Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:31:24 (32721): wrapper (7.7.26015): starting
17:31:24 (32721): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 17:31:24] Arguments: --nthreads 8
[2025-07-26 17:31:24] Threads: 8
[2025-07-26 17:31:24] Checking for CVMFS
[2025-07-26 17:31:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 17:31:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 17:31:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 17:31:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 17:31:24] 2.11.2.0 2936 83956 79484 148790 2 56 11112734 20275200 1 130560 0 18841161 99.947 4939290 37312 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 17:31:24] CVMFS is ok
[2025-07-26 17:31:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 17:31:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 17:31:24] Further information can be found at the LHC@home message board.
[2025-07-26 17:31:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 17:31:24] Checking for apptainer binary...
[2025-07-26 17:31:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 17:31:24] Running /usr/bin/apptainer --version
[2025-07-26 17:31:25] apptainer version 1.3.2-1.el7
[2025-07-26 17:31:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 17:31:26] c-204-13.aglt2.org
[2025-07-26 17:31:26] apptainer works
[2025-07-26 17:31:26] Set ATHENA_PROC_NUMBER=8
[2025-07-26 17:31:26] Set ATHENA_CORE_NUMBER=8
[2025-07-26 17:31:26] Starting ATLAS job with PandaID=6745262215
[2025-07-26 17:31:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 20:01:26]  *** The last 200 lines of the pilot log: ***
[2025-07-26 20:01:26] 2025-07-27 00:00:49,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:01:26] 2025-07-27 00:00:51,985 | INFO     | monitor loop #662: job 0:6745262215 is in state 'finished'
[2025-07-26 20:01:26] 2025-07-27 00:00:51,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:01:26] 2025-07-27 00:00:52,134 | INFO     | PID=4022 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 20:01:26] 2025-07-27 00:00:53,588 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 20:01:26] 2025-07-27 00:00:53,592 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-07-26 20:01:26] 2025-07-27 00:00:53,594 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745262215/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 20:01:26] 2025-07-27 00:00:53,594 | INFO     | extracted standard info from prmon json
[2025-07-26 20:01:26] 2025-07-27 00:00:53,595 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 20:01:26] 2025-07-27 00:00:53,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 20:01:26] 2025-07-27 00:00:53,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 20:01:26] 2025-07-27 00:00:53,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:01:26] 2025-07-27 00:00:53,598 | INFO     | fitting pss+swap vs Time
[2025-07-26 20:01:26] 2025-07-27 00:00:53,598 | INFO     | sum of square deviations: 964976232.5
[2025-07-26 20:01:26] 2025-07-27 00:00:53,599 | INFO     | sum of deviations: -743436096.9999905
[2025-07-26 20:01:26] 2025-07-27 00:00:53,599 | INFO     | mean x: 1753569959.5
[2025-07-26 20:01:26] 2025-07-27 00:00:53,599 | INFO     | mean y: 2537372.1232876712
[2025-07-26 20:01:26] 2025-07-27 00:00:53,599 | INFO     | -- intersect: 1353521119.2873518
[2025-07-26 20:01:26] 2025-07-27 00:00:53,599 | INFO     | intersect: 1353521119.2873518
[2025-07-26 20:01:26] 2025-07-27 00:00:53,600 | INFO     | chi2: 1.6617115767233768
[2025-07-26 20:01:26] 2025-07-27 00:00:53,600 | INFO     | sum of square deviations: 869188390.0
[2025-07-26 20:01:26] 2025-07-27 00:00:53,601 | INFO     | sum of deviations: -486199218.99998426
[2025-07-26 20:01:26] 2025-07-27 00:00:53,601 | INFO     | mean x: 1753569807.0
[2025-07-26 20:01:26] 2025-07-27 00:00:53,601 | INFO     | mean y: 2537781.8085106383
[2025-07-26 20:01:26] 2025-07-27 00:00:53,601 | INFO     | -- intersect: 983434766.2072014
[2025-07-26 20:01:26] 2025-07-27 00:00:53,602 | INFO     | intersect: 983434766.2072014
[2025-07-26 20:01:26] 2025-07-27 00:00:53,602 | INFO     | chi2: 1.662373957718819
[2025-07-26 20:01:26] 2025-07-27 00:00:53,602 | INFO     | current chi2=1.662373957718819 (change=-0.039861369729899426 %)
[2025-07-26 20:01:26] 2025-07-27 00:00:53,602 | INFO     | right removable region: 140
[2025-07-26 20:01:26] 2025-07-27 00:00:53,602 | INFO     | sum of square deviations: 869188390.0
[2025-07-26 20:01:26] 2025-07-27 00:00:53,603 | INFO     | sum of deviations: -23121413709.0
[2025-07-26 20:01:26] 2025-07-27 00:00:53,603 | INFO     | mean x: 1753570112.0
[2025-07-26 20:01:26] 2025-07-27 00:00:53,603 | INFO     | mean y: 2572438.503546099
[2025-07-26 20:01:26] 2025-07-27 00:00:53,603 | INFO     | -- intersect: 46649560011.92185
[2025-07-26 20:01:26] 2025-07-27 00:00:53,603 | INFO     | intersect: 46649560011.92185
[2025-07-26 20:01:26] 2025-07-27 00:00:53,604 | INFO     | chi2: 0.1600983390999961
[2025-07-26 20:01:26] 2025-07-27 00:00:53,604 | INFO     | current chi2=0.1600983390999961 (change=90.36545563366154 %)
[2025-07-26 20:01:26] 2025-07-27 00:00:53,604 | INFO     | sum of square deviations: 779958810.0
[2025-07-26 20:01:26] 2025-07-27 00:00:53,605 | INFO     | sum of deviations: -23063807474.5
[2025-07-26 20:01:26] 2025-07-27 00:00:53,605 | INFO     | mean x: 1753570264.5
[2025-07-26 20:01:26] 2025-07-27 00:00:53,605 | INFO     | mean y: 2572243.845588235
[2025-07-26 20:01:26] 2025-07-27 00:00:53,605 | INFO     | -- intersect: 51856601527.05356
[2025-07-26 20:01:26] 2025-07-27 00:00:53,605 | INFO     | intersect: 51856601527.05356
[2025-07-26 20:01:26] 2025-07-27 00:00:53,606 | INFO     | chi2: 0.13772772511847203
[2025-07-26 20:01:26] 2025-07-27 00:00:53,606 | INFO     | current chi2=0.13772772511847203 (change=13.973045633878542 %)
[2025-07-26 20:01:26] 2025-07-27 00:00:53,606 | INFO     | left removable region: 20
[2025-07-26 20:01:26] 2025-07-27 00:00:53,606 | INFO     | sum of square deviations: 535786790.0
[2025-07-26 20:01:26] 2025-07-27 00:00:53,607 | INFO     | sum of deviations: -13940862560.499998
[2025-07-26 20:01:26] 2025-07-27 00:00:53,607 | INFO     | mean x: 1753570386.5
[2025-07-26 20:01:26] 2025-07-27 00:00:53,607 | INFO     | mean y: 2557571.5416666665
[2025-07-26 20:01:26] 2025-07-27 00:00:53,607 | INFO     | -- intersect: 45629445364.64937
[2025-07-26 20:01:26] 2025-07-27 00:00:53,607 | INFO     | intersect: 45629445364.64937
[2025-07-26 20:01:26] 2025-07-27 00:00:53,607 | INFO     | chi2: 0.11849962559784431
[2025-07-26 20:01:26] 2025-07-27 00:00:53,608 | INFO     | -- intersect: 45629445364.64937
[2025-07-26 20:01:26] 2025-07-27 00:00:53,608 | INFO     | current memory leak: -26.02 B/s (using 120 data points, chi2=0.12)
[2025-07-26 20:01:26] 2025-07-27 00:00:53,608 | INFO     | could have reported an average CPU frequency of 2012 MHz (8 samples)
[2025-07-26 20:01:26] 2025-07-27 00:00:53,608 | INFO     | ..............................
[2025-07-26 20:01:26] 2025-07-27 00:00:53,608 | INFO     | . Timing measurements:
[2025-07-26 20:01:26] 2025-07-27 00:00:53,609 | INFO     | . get job = 0 s
[2025-07-26 20:01:26] 2025-07-27 00:00:53,609 | INFO     | . initial setup = 2 s
[2025-07-26 20:01:26] 2025-07-27 00:00:53,609 | INFO     | . payload setup = 11 s
[2025-07-26 20:01:26] 2025-07-27 00:00:53,609 | INFO     | . stage-in = 0 s
[2025-07-26 20:01:26] 2025-07-27 00:00:53,609 | INFO     | . payload execution = 8905 s
[2025-07-26 20:01:26] 2025-07-27 00:00:53,609 | INFO     | . stage-out = 1 s
[2025-07-26 20:01:26] 2025-07-27 00:00:53,609 | INFO     | . log creation = 0 s
[2025-07-26 20:01:26] 2025-07-27 00:00:53,609 | INFO     | ..............................
[2025-07-26 20:01:26] 2025-07-27 00:00:53,704 | INFO     | 
[2025-07-26 20:01:26] 2025-07-27 00:00:53,704 | INFO     | job summary report
[2025-07-26 20:01:26] 2025-07-27 00:00:53,704 | INFO     | --------------------------------------------------
[2025-07-26 20:01:26] 2025-07-27 00:00:53,704 | INFO     | PanDA job id: 6745262215
[2025-07-26 20:01:26] 2025-07-27 00:00:53,705 | INFO     | task id: 45743349
[2025-07-26 20:01:26] 2025-07-27 00:00:53,705 | INFO     | errors: (none)
[2025-07-26 20:01:26] 2025-07-27 00:00:53,705 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 20:01:26] 2025-07-27 00:00:53,705 | INFO     | pilot state: finished 
[2025-07-26 20:01:26] 2025-07-27 00:00:53,705 | INFO     | transexitcode: 0
[2025-07-26 20:01:26] 2025-07-27 00:00:53,705 | INFO     | exeerrorcode: 0
[2025-07-26 20:01:26] 2025-07-27 00:00:53,705 | INFO     | exeerrordiag: 
[2025-07-26 20:01:26] 2025-07-27 00:00:53,705 | INFO     | exitcode: 0
[2025-07-26 20:01:26] 2025-07-27 00:00:53,705 | INFO     | exitmsg: OK
[2025-07-26 20:01:26] 2025-07-27 00:00:53,706 | INFO     | cpuconsumptiontime: 65693 s
[2025-07-26 20:01:26] 2025-07-27 00:00:53,706 | INFO     | nevents: 400
[2025-07-26 20:01:26] 2025-07-27 00:00:53,706 | INFO     | neventsw: 0
[2025-07-26 20:01:26] 2025-07-27 00:00:53,706 | INFO     | pid: 10571
[2025-07-26 20:01:26] 2025-07-27 00:00:53,706 | INFO     | pgrp: 10571
[2025-07-26 20:01:26] 2025-07-27 00:00:53,706 | INFO     | corecount: 8
[2025-07-26 20:01:26] 2025-07-27 00:00:53,706 | INFO     | event service: False
[2025-07-26 20:01:26] 2025-07-27 00:00:53,706 | INFO     | sizes: {0: 2397475, 1: 2397475, 6: 2397765, 11: 2397793, 8921: 2426004, 8922: 2435002, 8925: 2435186, 8934: 2435380}
[2025-07-26 20:01:26] 2025-07-27 00:00:53,707 | INFO     | --------------------------------------------------
[2025-07-26 20:01:26] 2025-07-27 00:00:53,707 | INFO     | 
[2025-07-26 20:01:26] 2025-07-27 00:00:53,707 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 20:01:26] 2025-07-27 00:00:53,732 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,733 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,733 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,733 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,733 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,733 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,734 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,734 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,734 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,734 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,734 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,735 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 20:01:26] 2025-07-27 00:00:53,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 20:01:26] 2025-07-27 00:00:53,736 | INFO     | job 6745262215 has completed (purged errors)
[2025-07-26 20:01:26] 2025-07-27 00:00:53,736 | INFO     | overall cleanup function is called
[2025-07-26 20:01:26] 2025-07-27 00:00:54,745 | INFO     | --- collectZombieJob: --- 10, [10571]
[2025-07-26 20:01:26] 2025-07-27 00:00:54,745 | INFO     | zombie collector waiting for pid 10571
[2025-07-26 20:01:26] 2025-07-27 00:00:54,745 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 20:01:26] 2025-07-27 00:00:54,745 | INFO     | collected zombie processes
[2025-07-26 20:01:26] 2025-07-27 00:00:54,745 | INFO     | will attempt to kill all subprocesses of pid=10571
[2025-07-26 20:01:26] 2025-07-27 00:00:54,844 | INFO     | process IDs to be killed: [10571] (in reverse order)
[2025-07-26 20:01:26] 2025-07-27 00:00:54,907 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 20:01:26] 2025-07-27 00:00:54,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 20:01:26] 2025-07-27 00:00:54,912 | INFO     | did not find any defunct processes belonging to 10571
[2025-07-26 20:01:26] 2025-07-27 00:00:54,916 | INFO     | did not find any defunct processes belonging to 10571
[2025-07-26 20:01:26] 2025-07-27 00:00:54,916 | INFO     | ready for new job
[2025-07-26 20:01:26] 2025-07-27 00:00:54,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 20:01:26] 2025-07-27 00:00:54,918 | INFO     | ***************************************
[2025-07-26 20:01:26] 2025-07-27 00:00:54,918 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 20:01:26] 2025-07-27 00:00:54,918 | INFO     | ***************************************
[2025-07-26 20:01:26] 2025-07-27 00:00:54,918 | INFO     | 
[2025-07-26 20:01:26] 2025-07-27 00:00:54,919 | INFO     | architecture information:
[2025-07-26 20:01:26] 2025-07-27 00:00:54,920 | INFO     | executing command: cat /etc/os-release
[2025-07-26 20:01:26] 2025-07-27 00:00:54,937 | INFO     | cat /etc/os-release:
[2025-07-26 20:01:26] NAME="CentOS Linux"
[2025-07-26 20:01:26] VERSION="7 (Core)"
[2025-07-26 20:01:26] ID="centos"
[2025-07-26 20:01:26] ID_LIKE="rhel fedora"
[2025-07-26 20:01:26] VERSION_ID="7"
[2025-07-26 20:01:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 20:01:26] ANSI_COLOR="0;31"
[2025-07-26 20:01:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 20:01:26] HOME_URL="https://www.centos.org/"
[2025-07-26 20:01:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 20:01:26] 
[2025-07-26 20:01:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 20:01:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 20:01:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 20:01:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 20:01:26] 
[2025-07-26 20:01:26] 2025-07-27 00:00:54,938 | INFO     | ***************************************
[2025-07-26 20:01:26] 2025-07-27 00:00:55,441 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 20:01:26] 2025-07-27 00:00:55,461 | INFO     | sufficient remaining disk space (18741198848 B)
[2025-07-26 20:01:26] 2025-07-27 00:00:55,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 20:01:26] 2025-07-27 00:00:55,462 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 20:01:26] 2025-07-27 00:00:55,462 | INFO     | update_server=False
[2025-07-26 20:01:26] 2025-07-27 00:00:55,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 20:01:26] 2025-07-27 00:00:55,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 20:01:26] 2025-07-27 00:00:55,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:01:26] 2025-07-27 00:00:55,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 20:01:26] 2025-07-27 00:00:55,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:01:26] 2025-07-27 00:00:55,494 | INFO     | aborting loop
[2025-07-26 20:01:26] 2025-07-27 00:00:56,086 | INFO     | all data control threads have been joined
[2025-07-26 20:01:26] 2025-07-27 00:00:56,136 | INFO     | all payload control threads have been joined
[2025-07-26 20:01:26] 2025-07-27 00:00:56,468 | INFO     | [job] retrieve thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:56,469 | INFO     | [job] queue monitor thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:56,500 | INFO     | [job] job monitor thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:56,560 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:56,975 | INFO     | [job] validate thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:57,052 | INFO     | all job control threads have been joined
[2025-07-26 20:01:26] 2025-07-27 00:00:57,091 | INFO     | [data] control thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:57,142 | INFO     | [payload] control thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:57,469 | INFO     | [data] copytool_out thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:57,580 | INFO     | [payload] failed_post thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:57,693 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:57,708 | INFO     | [data] copytool_in thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:57,853 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:57,873 | INFO     | [payload] validate_post thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:58,057 | INFO     | [job] control thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:00:59,470 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:01:05,536 | INFO     | job.realtimelogging is not enabled
[2025-07-26 20:01:26] 2025-07-27 00:01:06,542 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 20:01:26] 2025-07-27 00:01:06,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058327390016)>', '<ExcThread(monitor, started 140057071580928)>']
[2025-07-26 20:01:26] 2025-07-27 00:01:11,665 | INFO     | all workflow threads have been joined
[2025-07-26 20:01:26] 2025-07-27 00:01:11,665 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 20:01:26] 2025-07-27 00:01:11,666 | INFO     | traces error code: 0
[2025-07-26 20:01:26] 2025-07-27 00:01:11,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 20:01:26] 2025-07-27 00:01:26,366 | INFO     | PID=4022 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 20:01:26] 2025-07-27 00:01:26,366 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 20:01:26] 2025-07-27 00:01:26,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 20:01:26] 2025-07-27 00:01:26,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 20:01:26] 2025-07-27 00:01:26,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 20:01:26] 2025-07-27 00:01:26,366 | INFO     | [monitor] control thread has ended
[2025-07-26 20:01:26] 2025-07-27 00:01:26,488 [wrapper] ==== pilot stdout END ====
[2025-07-26 20:01:26] 2025-07-27 00:01:26,493 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 20:01:26] 2025-07-27 00:01:26,499 [wrapper] pilotpid: 4022
[2025-07-26 20:01:26] 2025-07-27 00:01:26,504 [wrapper] Pilot exit status: 0
[2025-07-26 20:01:26] 2025-07-27 00:01:26,524 [wrapper] pandaids: 6745262215
[2025-07-26 20:01:26] 2025-07-27 00:01:26,569 [wrapper] cleanup supervisor_pilot 12055 4023
[2025-07-26 20:01:26] 2025-07-27 00:01:26,573 [wrapper] Test setup, not cleaning
[2025-07-26 20:01:26] 2025-07-27 00:01:26,577 [wrapper] apfmon messages muted
[2025-07-26 20:01:26] 2025-07-27 00:01:26,582 [wrapper] ==== wrapper stdout END ====
[2025-07-26 20:01:26] 2025-07-27 00:01:26,586 [wrapper] ==== wrapper stderr END ====
[2025-07-26 20:01:26]  *** Error codes and diagnostics ***
[2025-07-26 20:01:26]     "exeErrorCode": 0,
[2025-07-26 20:01:26]     "exeErrorDiag": "",
[2025-07-26 20:01:26]     "pilotErrorCode": 0,
[2025-07-26 20:01:26]     "pilotErrorDiag": "",
[2025-07-26 20:01:26]  *** Listing of results directory ***
[2025-07-26 20:01:26] total 354832
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 11:50 pilot3.tar.gz
[2025-07-26 20:01:26] -rwx------ 1 boincer umatlas     36292 Jul 26 12:17 runpilot2-wrapper.sh
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 12:17 queuedata.json
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas       100 Jul 26 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 20:01:26] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 17:31 run_atlas
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas       105 Jul 26 17:31 job.xml
[2025-07-26 20:01:26] -rw-r--r-- 2 boincer umatlas 144228038 Jul 26 17:31 EVNT.45743347._002327.pool.root.1
[2025-07-26 20:01:26] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 17:31 start_atlas.sh
[2025-07-26 20:01:26] drwxrwx--x 2 boincer umatlas      4096 Jul 26 17:31 shared
[2025-07-26 20:01:26] -rw-r--r-- 2 boincer umatlas    542890 Jul 26 17:31 input.tar.gz
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas         0 Jul 26 17:31 boinc_lockfile
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 17:31 pandaJob.out
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas    980125 Jul 26 17:31 agis_schedconf.cvmfs.json
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas   1593052 Jul 26 17:31 agis_ddmendpoints.agis.ALL.json
[2025-07-26 20:01:26] drwx------ 4 boincer umatlas      4096 Jul 26 17:31 pilot3
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas      5825 Jul 26 19:57 init_data.xml
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas 212952475 Jul 26 20:00 HITS.45743349._040721.pool.root.1
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas       530 Jul 26 20:00 boinc_task_state.xml
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas      1074 Jul 26 20:00 memory_monitor_summary.json
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas    337563 Jul 26 20:00 log.45743349._040721.job.log.tgz.1
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas        95 Jul 26 20:00 pilot_heartbeat.json
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas      7845 Jul 26 20:00 heartbeat.json
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 20:00 boinc_mmap_file
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas        27 Jul 26 20:01 wrapper_checkpoint.txt
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas       744 Jul 26 20:01 pilotlog.txt
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas    809192 Jul 26 20:01 log.45743349._040721.job.log.1
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas       357 Jul 26 20:01 output.list
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas       620 Jul 26 20:01 runtime_log
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas   1167360 Jul 26 20:01 result.tar.gz
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas      8660 Jul 26 20:01 runtime_log.err
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas       660 Jul 26 20:01 NIfKDmllwz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYYSLDmwHDlnn.diag
[2025-07-26 20:01:26] -rw-r--r-- 1 boincer umatlas     21226 Jul 26 20:01 stderr.txt
[2025-07-26 20:01:26] HITS file was successfully produced:
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas 212952475 Jul 26 20:00 shared/HITS.pool.root.1
[2025-07-26 20:01:26]  *** Contents of shared directory: ***
[2025-07-26 20:01:26] total 350504
[2025-07-26 20:01:26] -rw-r--r-- 2 boincer umatlas 144228038 Jul 26 17:31 ATLAS.root_0
[2025-07-26 20:01:26] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 17:31 start_atlas.sh
[2025-07-26 20:01:26] -rw-r--r-- 2 boincer umatlas    542890 Jul 26 17:31 input.tar.gz
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas 212952475 Jul 26 20:00 HITS.pool.root.1
[2025-07-26 20:01:26] -rw------- 1 boincer umatlas   1167360 Jul 26 20:01 result.tar.gz
20:01:27 (32721): run_atlas exited; CPU time 65628.277301
20:01:27 (32721): called boinc_finish(0)

</stderr_txt>
]]>

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