Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:49:03 (14176): wrapper (7.7.26015): starting
08:49:03 (14176): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 08:49:03] Arguments: --nthreads 8
[2025-07-27 08:49:03] Threads: 8
[2025-07-27 08:49:03] Checking for CVMFS
[2025-07-27 08:49:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 08:49:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 08:49:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 08:49:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 08:49:05] 2.11.2.0 16765 109204 136344 148803 0 155 24045437 25165824 4097 130560 0 82939721 99.863 48060058 3354 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 08:49:05] CVMFS is ok
[2025-07-27 08:49:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 08:49:05] Checking for apptainer binary...
[2025-07-27 08:49:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 08:49:05] Running /usr/bin/apptainer --version
[2025-07-27 08:49:05] apptainer version 1.3.2-1.el7
[2025-07-27 08:49:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 08:49:06] cg-vwn404.simple-grid.lan
[2025-07-27 08:49:06] apptainer works
[2025-07-27 08:49:06] Set ATHENA_PROC_NUMBER=8
[2025-07-27 08:49:06] Set ATHENA_CORE_NUMBER=8
[2025-07-27 08:49:06] Starting ATLAS job with PandaID=6745354726
[2025-07-27 08:49:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:40:38]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:40:38] 2025-07-27 11:38:23,219 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:40:38] 2025-07-27 11:38:23,226 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:40:38] 2025-07-27 11:38:23,227 | INFO     | sum of square deviations: 6880054580.0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,229 | INFO     | sum of deviations: 15658400489.999996
[2025-07-27 13:40:38] 2025-07-27 11:38:23,230 | INFO     | mean x: 1753607601.0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,230 | INFO     | mean y: 2501612.71886121
[2025-07-27 13:40:38] 2025-07-27 11:38:23,230 | INFO     | -- intersect: -3988555405.7221346
[2025-07-27 13:40:38] 2025-07-27 11:38:23,230 | INFO     | intersect: -3988555405.7221346
[2025-07-27 13:40:38] 2025-07-27 11:38:23,231 | INFO     | chi2: 2.6725035309584837
[2025-07-27 13:40:38] 2025-07-27 11:38:23,231 | INFO     | sum of square deviations: 6519285025.0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,234 | INFO     | sum of deviations: 34536294725.99999
[2025-07-27 13:40:38] 2025-07-27 11:38:23,234 | INFO     | mean x: 1753607448.5
[2025-07-27 13:40:38] 2025-07-27 11:38:23,234 | INFO     | mean y: 2509473.7536231885
[2025-07-27 13:40:38] 2025-07-27 11:38:23,234 | INFO     | -- intersect: -9287328820.30146
[2025-07-27 13:40:38] 2025-07-27 11:38:23,234 | INFO     | intersect: -9287328820.30146
[2025-07-27 13:40:38] 2025-07-27 11:38:23,235 | INFO     | chi2: 1.8454745494792135
[2025-07-27 13:40:38] 2025-07-27 11:38:23,235 | INFO     | current chi2=1.8454745494792135 (change=30.94585177901184 %)
[2025-07-27 13:40:38] 2025-07-27 11:38:23,235 | INFO     | sum of square deviations: 6171352920.0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,238 | INFO     | sum of deviations: 33608571834.00006
[2025-07-27 13:40:38] 2025-07-27 11:38:23,238 | INFO     | mean x: 1753607296.0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,238 | INFO     | mean y: 2509067.0885608857
[2025-07-27 13:40:38] 2025-07-27 11:38:23,238 | INFO     | -- intersect: -9547461180.965672
[2025-07-27 13:40:38] 2025-07-27 11:38:23,238 | INFO     | intersect: -9547461180.965672
[2025-07-27 13:40:38] 2025-07-27 11:38:23,239 | INFO     | chi2: 1.8462290067216793
[2025-07-27 13:40:38] 2025-07-27 11:38:23,239 | INFO     | current chi2=1.8462290067216793 (change=-0.04088147640284265 %)
[2025-07-27 13:40:38] 2025-07-27 11:38:23,239 | INFO     | right removable region: 270
[2025-07-27 13:40:38] 2025-07-27 11:38:23,240 | INFO     | sum of square deviations: 6519285025.0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,242 | INFO     | sum of deviations: -35751916390.0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,243 | INFO     | mean x: 1753607753.5
[2025-07-27 13:40:38] 2025-07-27 11:38:23,243 | INFO     | mean y: 2523204.920289855
[2025-07-27 13:40:38] 2025-07-27 11:38:23,243 | INFO     | -- intersect: 9619350440.355932
[2025-07-27 13:40:38] 2025-07-27 11:38:23,243 | INFO     | intersect: 9619350440.355932
[2025-07-27 13:40:38] 2025-07-27 11:38:23,243 | INFO     | chi2: 0.9840823465200292
[2025-07-27 13:40:38] 2025-07-27 11:38:23,244 | INFO     | current chi2=0.9840823465200292 (change=63.177509959468914 %)
[2025-07-27 13:40:38] 2025-07-27 11:38:23,244 | INFO     | sum of square deviations: 6171352920.0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,247 | INFO     | sum of deviations: -35760387155.0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,247 | INFO     | mean x: 1753607906.0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,247 | INFO     | mean y: 2523186.2878228785
[2025-07-27 13:40:38] 2025-07-27 11:38:23,247 | INFO     | -- intersect: 10163941346.866598
[2025-07-27 13:40:38] 2025-07-27 11:38:23,247 | INFO     | intersect: 10163941346.866598
[2025-07-27 13:40:38] 2025-07-27 11:38:23,248 | INFO     | chi2: 0.9695241663724268
[2025-07-27 13:40:38] 2025-07-27 11:38:23,248 | INFO     | current chi2=0.9695241663724268 (change=1.4793660509289663 %)
[2025-07-27 13:40:38] 2025-07-27 11:38:23,248 | INFO     | left removable region: 20
[2025-07-27 13:40:38] 2025-07-27 11:38:23,249 | INFO     | sum of square deviations: 4844974562.5
[2025-07-27 13:40:38] 2025-07-27 11:38:23,251 | INFO     | sum of deviations: -568466441.9999981
[2025-07-27 13:40:38] 2025-07-27 11:38:23,251 | INFO     | mean x: 1753607875.5
[2025-07-27 13:40:38] 2025-07-27 11:38:23,251 | INFO     | mean y: 2523633.912
[2025-07-27 13:40:38] 2025-07-27 11:38:23,251 | INFO     | -- intersect: 208276464.3529257
[2025-07-27 13:40:38] 2025-07-27 11:38:23,251 | INFO     | intersect: 208276464.3529257
[2025-07-27 13:40:38] 2025-07-27 11:38:23,252 | INFO     | chi2: 0.0643516048713122
[2025-07-27 13:40:38] 2025-07-27 11:38:23,252 | INFO     | -- intersect: 208276464.3529257
[2025-07-27 13:40:38] 2025-07-27 11:38:23,252 | INFO     | current memory leak: -0.12 B/s (using 250 data points, chi2=0.06)
[2025-07-27 13:40:38] 2025-07-27 11:38:23,253 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 13:40:38] 2025-07-27 11:38:23,253 | INFO     | ..............................
[2025-07-27 13:40:38] 2025-07-27 11:38:23,253 | INFO     | . Timing measurements:
[2025-07-27 13:40:38] 2025-07-27 11:38:23,253 | INFO     | . get job = 0 s
[2025-07-27 13:40:38] 2025-07-27 11:38:23,253 | INFO     | . initial setup = 2 s
[2025-07-27 13:40:38] 2025-07-27 11:38:23,253 | INFO     | . payload setup = 14 s
[2025-07-27 13:40:38] 2025-07-27 11:38:23,253 | INFO     | . stage-in = 0 s
[2025-07-27 13:40:38] 2025-07-27 11:38:23,253 | INFO     | . payload execution = 17181 s
[2025-07-27 13:40:38] 2025-07-27 11:38:23,253 | INFO     | . stage-out = 4 s
[2025-07-27 13:40:38] 2025-07-27 11:38:23,254 | INFO     | . log creation = 1 s
[2025-07-27 13:40:38] 2025-07-27 11:38:23,254 | INFO     | ..............................
[2025-07-27 13:40:38] 2025-07-27 11:38:23,521 | INFO     | 
[2025-07-27 13:40:38] 2025-07-27 11:38:23,521 | INFO     | job summary report
[2025-07-27 13:40:38] 2025-07-27 11:38:23,521 | INFO     | --------------------------------------------------
[2025-07-27 13:40:38] 2025-07-27 11:38:23,521 | INFO     | PanDA job id: 6745354726
[2025-07-27 13:40:38] 2025-07-27 11:38:23,522 | INFO     | task id: 45743349
[2025-07-27 13:40:38] 2025-07-27 11:38:23,522 | INFO     | errors: (none)
[2025-07-27 13:40:38] 2025-07-27 11:38:23,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:40:38] 2025-07-27 11:38:23,522 | INFO     | pilot state: finished 
[2025-07-27 13:40:38] 2025-07-27 11:38:23,522 | INFO     | transexitcode: 0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,522 | INFO     | exeerrorcode: 0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,522 | INFO     | exeerrordiag: 
[2025-07-27 13:40:38] 2025-07-27 11:38:23,522 | INFO     | exitcode: 0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,522 | INFO     | exitmsg: OK
[2025-07-27 13:40:38] 2025-07-27 11:38:23,522 | INFO     | cpuconsumptiontime: 65681 s
[2025-07-27 13:40:38] 2025-07-27 11:38:23,522 | INFO     | nevents: 400
[2025-07-27 13:40:38] 2025-07-27 11:38:23,523 | INFO     | neventsw: 0
[2025-07-27 13:40:38] 2025-07-27 11:38:23,523 | INFO     | pid: 24744
[2025-07-27 13:40:38] 2025-07-27 11:38:23,523 | INFO     | pgrp: 24744
[2025-07-27 13:40:38] 2025-07-27 11:38:23,523 | INFO     | corecount: 8
[2025-07-27 13:40:38] 2025-07-27 11:38:23,523 | INFO     | event service: False
[2025-07-27 13:40:38] 2025-07-27 11:38:23,523 | INFO     | sizes: {0: 2397304, 1: 2397503, 12: 2397503, 19: 2397793, 23: 2397821, 17199: 2429358, 17204: 2438412, 17299: 2438550}
[2025-07-27 13:40:38] 2025-07-27 11:38:23,523 | INFO     | --------------------------------------------------
[2025-07-27 13:40:38] 2025-07-27 11:38:23,523 | INFO     | 
[2025-07-27 13:40:38] 2025-07-27 11:38:23,523 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-07-27 13:40:38] 2025-07-27 11:38:24,086 | INFO     | PID=18175 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 13:40:38] 2025-07-27 11:38:24,087 | INFO     | .. there are 9 such processes running
[2025-07-27 13:40:38] 2025-07-27 11:38:24,142 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,143 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,143 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,143 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,143 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,143 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,143 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,143 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,143 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,143 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,144 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,144 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,144 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,144 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,144 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,144 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,144 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,144 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:40:38] 2025-07-27 11:38:24,144 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,144 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:40:38] 2025-07-27 11:38:24,145 | INFO     | job 6745354726 has completed (purged errors)
[2025-07-27 13:40:38] 2025-07-27 11:38:24,145 | INFO     | overall cleanup function is called
[2025-07-27 13:40:38] 2025-07-27 11:38:25,154 | INFO     | --- collectZombieJob: --- 10, [24744]
[2025-07-27 13:40:38] 2025-07-27 11:38:25,154 | INFO     | zombie collector waiting for pid 24744
[2025-07-27 13:40:38] 2025-07-27 11:38:25,154 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:40:38] 2025-07-27 11:38:25,155 | INFO     | collected zombie processes
[2025-07-27 13:40:38] 2025-07-27 11:38:25,155 | INFO     | will attempt to kill all subprocesses of pid=24744
[2025-07-27 13:40:38] 2025-07-27 11:38:25,258 | INFO     | process IDs to be killed: [24744] (in reverse order)
[2025-07-27 13:40:38] 2025-07-27 11:38:26,234 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:40:38] 2025-07-27 11:38:26,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:40:38] 2025-07-27 11:38:26,238 | INFO     | did not find any defunct processes belonging to 24744
[2025-07-27 13:40:38] 2025-07-27 11:38:26,241 | INFO     | did not find any defunct processes belonging to 24744
[2025-07-27 13:40:38] 2025-07-27 11:38:26,241 | INFO     | ready for new job
[2025-07-27 13:40:38] 2025-07-27 11:38:26,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:40:38] 2025-07-27 11:38:26,243 | INFO     | ***************************************
[2025-07-27 13:40:38] 2025-07-27 11:38:26,243 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:40:38] 2025-07-27 11:38:26,243 | INFO     | ***************************************
[2025-07-27 13:40:38] 2025-07-27 11:38:26,243 | INFO     | 
[2025-07-27 13:40:38] 2025-07-27 11:38:26,244 | INFO     | pilot is running in a VM
[2025-07-27 13:40:38] 2025-07-27 11:38:26,244 | INFO     | architecture information:
[2025-07-27 13:40:38] 2025-07-27 11:38:26,256 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:40:38] 2025-07-27 11:38:26,515 | INFO     | cat /etc/os-release:
[2025-07-27 13:40:38] NAME="CentOS Linux"
[2025-07-27 13:40:38] VERSION="7 (Core)"
[2025-07-27 13:40:38] ID="centos"
[2025-07-27 13:40:38] ID_LIKE="rhel fedora"
[2025-07-27 13:40:38] VERSION_ID="7"
[2025-07-27 13:40:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:40:38] ANSI_COLOR="0;31"
[2025-07-27 13:40:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:40:38] HOME_URL="https://www.centos.org/"
[2025-07-27 13:40:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:40:38] 
[2025-07-27 13:40:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:40:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:40:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:40:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:40:38] 
[2025-07-27 13:40:38] 2025-07-27 11:38:26,516 | INFO     | ***************************************
[2025-07-27 13:40:38] 2025-07-27 11:38:27,019 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-07-27 13:40:38] 2025-07-27 11:38:27,283 | INFO     | sufficient remaining disk space (496871931904 B)
[2025-07-27 13:40:38] 2025-07-27 11:38:27,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:40:38] 2025-07-27 11:38:27,283 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:40:38] 2025-07-27 11:38:27,283 | INFO     | update_server=False
[2025-07-27 13:40:38] 2025-07-27 11:38:27,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:40:38] 2025-07-27 11:38:27,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:40:38] 2025-07-27 11:38:27,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:40:38] 2025-07-27 11:38:27,285 | INFO     | aborting loop
[2025-07-27 13:40:38] 2025-07-27 11:38:27,664 | INFO     | all job control threads have been joined
[2025-07-27 13:40:38] 2025-07-27 11:38:27,749 | INFO     | all payload control threads have been joined
[2025-07-27 13:40:38] 2025-07-27 11:38:28,289 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:28,290 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:28,369 | INFO     | all data control threads have been joined
[2025-07-27 13:40:38] 2025-07-27 11:38:28,399 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:40:38] 2025-07-27 11:38:28,410 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:28,511 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:28,670 | INFO     | [job] control thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:28,690 | INFO     | [job] validate thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:28,755 | INFO     | [payload] control thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:28,930 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:28,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:40:38] 2025-07-27 11:38:29,291 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:29,375 | INFO     | [data] control thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:29,383 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:29,405 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:29,554 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:29,735 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:29,781 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:32,984 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:40:38] 2025-07-27 11:38:33,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648351016768)>', '<ExcThread(monitor, started 139647170639616)>']
[2025-07-27 13:40:38] 2025-07-27 11:38:38,960 | INFO     | all workflow threads have been joined
[2025-07-27 13:40:38] 2025-07-27 11:38:38,960 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:40:38] 2025-07-27 11:38:38,961 | INFO     | traces error code: 0
[2025-07-27 13:40:38] 2025-07-27 11:38:38,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:40:38] 2025-07-27 11:38:56,278 | INFO     | PID=18175 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 13:40:38] 2025-07-27 11:38:56,278 | INFO     | .. there are 9 such processes running
[2025-07-27 13:40:38] 2025-07-27 11:38:56,279 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:40:38] 2025-07-27 11:38:56,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:40:38] 2025-07-27 11:38:56,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:40:38] 2025-07-27 11:38:56,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:40:38] 2025-07-27 11:38:56,280 | INFO     | [monitor] control thread has ended
[2025-07-27 13:40:38] 2025-07-27 11:38:56,623 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:40:38] 2025-07-27 11:38:56,647 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:40:38] 2025-07-27 11:38:56,709 [wrapper] pilotpid: 18175
[2025-07-27 13:40:38] 2025-07-27 11:38:56,747 [wrapper] Pilot exit status: 0
[2025-07-27 13:40:38] 2025-07-27 11:38:57,009 [wrapper] pandaids: 6745354726
[2025-07-27 13:40:38] 2025-07-27 11:38:57,349 [wrapper] cleanup supervisor_pilot 20049 18176
[2025-07-27 13:40:38] 2025-07-27 11:38:57,375 [wrapper] Test setup, not cleaning
[2025-07-27 13:40:38] 2025-07-27 11:38:57,402 [wrapper] apfmon messages muted
[2025-07-27 13:40:38] 2025-07-27 11:38:57,423 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:40:38] 2025-07-27 11:38:57,451 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:40:38]  *** Error codes and diagnostics ***
[2025-07-27 13:40:38]     "exeErrorCode": 0,
[2025-07-27 13:40:38]     "exeErrorDiag": "",
[2025-07-27 13:40:38]     "pilotErrorCode": 0,
[2025-07-27 13:40:38]     "pilotErrorDiag": "",
[2025-07-27 13:40:38]  *** Listing of results directory ***
[2025-07-27 13:40:38] total 358160
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc    530466 Jul 26 20:40 pilot3.tar.gz
[2025-07-27 13:40:38] -rwx------. 1 boinc boinc     36292 Jul 26 21:04 runpilot2-wrapper.sh
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc      5112 Jul 26 21:04 queuedata.json
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc       100 Jul 27 08:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:40:38] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 08:49 run_atlas
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc       105 Jul 27 08:49 job.xml
[2025-07-27 13:40:38] -rw-r--r--. 2 boinc boinc 143748187 Jul 27 08:49 EVNT.45743347._002424.pool.root.1
[2025-07-27 13:40:38] drwxrwx--x. 2 boinc boinc        68 Jul 27 08:49 shared
[2025-07-27 13:40:38] -rw-r--r--. 2 boinc boinc    542897 Jul 27 08:49 input.tar.gz
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc      6392 Jul 27 08:49 init_data.xml
[2025-07-27 13:40:38] -rw-r--r--. 2 boinc boinc     15095 Jul 27 08:49 start_atlas.sh
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc         0 Jul 27 08:49 boinc_lockfile
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc      2563 Jul 27 08:49 pandaJob.out
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc    980125 Jul 27 08:49 agis_schedconf.cvmfs.json
[2025-07-27 13:40:38] drwx------. 4 boinc boinc      4096 Jul 27 08:49 pilot3
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc 215351729 Jul 27 13:35 HITS.45743349._042900.pool.root.1
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc       530 Jul 27 13:35 boinc_task_state.xml
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc      1016 Jul 27 13:36 memory_monitor_summary.json
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc   1593052 Jul 27 13:36 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc    410909 Jul 27 13:36 log.45743349._042900.job.log.tgz.1
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc      7777 Jul 27 13:38 heartbeat.json
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc       820 Jul 27 13:38 pilotlog.txt
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc        95 Jul 27 13:38 pilot_heartbeat.json
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc   1483841 Jul 27 13:38 log.45743349._042900.job.log.1
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc       357 Jul 27 13:38 output.list
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc       620 Jul 27 13:38 runtime_log
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc   1914880 Jul 27 13:38 result.tar.gz
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc      8660 Jul 27 13:38 runtime_log.err
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc       656 Jul 27 13:38 D5jNDmrMzz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmvH1KDmpxHeWn.diag
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc      8192 Jul 27 13:40 boinc_mmap_file
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc        28 Jul 27 13:40 wrapper_checkpoint.txt
[2025-07-27 13:40:38] -rw-r--r--. 1 boinc boinc     20686 Jul 27 13:40 stderr.txt
[2025-07-27 13:40:38] HITS file was successfully produced:
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc 215351729 Jul 27 13:35 shared/HITS.pool.root.1
[2025-07-27 13:40:38]  *** Contents of shared directory: ***
[2025-07-27 13:40:38] total 353108
[2025-07-27 13:40:38] -rw-r--r--. 2 boinc boinc 143748187 Jul 27 08:49 ATLAS.root_0
[2025-07-27 13:40:38] -rw-r--r--. 2 boinc boinc    542897 Jul 27 08:49 input.tar.gz
[2025-07-27 13:40:38] -rw-r--r--. 2 boinc boinc     15095 Jul 27 08:49 start_atlas.sh
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc 215351729 Jul 27 13:35 HITS.pool.root.1
[2025-07-27 13:40:38] -rw-------. 1 boinc boinc   1914880 Jul 27 13:38 result.tar.gz
13:40:40 (14176): run_atlas exited; CPU time 65906.301929
13:40:40 (14176): called boinc_finish(0)

</stderr_txt>
]]>

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