Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:26:39 (3358804): wrapper (7.7.26015): starting
17:26:39 (3358804): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 17:26:39] Arguments: --nthreads 8
[2025-07-26 17:26:39] Threads: 8
[2025-07-26 17:26:39] Checking for CVMFS
[2025-07-26 17:26:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 17:26:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 17:26:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 17:26:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 17:26:41] 2.13.0.0 97685 26333 420792 148790 0 72 29619095 32935937 17727 16776704 0 62263766 99.614 98532063 29632 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 17:26:41] CVMFS is ok
[2025-07-26 17:26:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 17:26:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 17:26:41] Further information can be found at the LHC@home message board.
[2025-07-26 17:26:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 17:26:41] Checking for apptainer binary...
[2025-07-26 17:26:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 17:26:41] Running /usr/bin/apptainer --version
[2025-07-26 17:26:41] apptainer version 1.4.1-1.el9
[2025-07-26 17:26:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 17:26:42] c6-4-5-1.aglt2.org
[2025-07-26 17:26:42] apptainer works
[2025-07-26 17:26:42] Set ATHENA_PROC_NUMBER=8
[2025-07-26 17:26:42] Set ATHENA_CORE_NUMBER=8
[2025-07-26 17:26:42] Starting ATLAS job with PandaID=6745230480
[2025-07-26 17:26:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:40:28]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:40:28] 2025-07-27 03:39:50,848 | INFO     | monitor loop #1240: job 0:6745230480 is in state 'finished'
[2025-07-26 23:40:28] 2025-07-27 03:39:50,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:40:28] 2025-07-27 03:39:53,352 | INFO     | monitor loop #1241: job 0:6745230480 is in state 'finished'
[2025-07-26 23:40:28] 2025-07-27 03:39:53,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:40:28] 2025-07-27 03:39:55,251 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 23:40:28] 2025-07-27 03:39:55,256 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2755.145484375
[2025-07-26 23:40:28] 2025-07-27 03:39:55,269 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745230480/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:40:28] 2025-07-27 03:39:55,270 | INFO     | extracted standard info from prmon json
[2025-07-26 23:40:28] 2025-07-27 03:39:55,270 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:40:28] 2025-07-27 03:39:55,270 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:40:28] 2025-07-27 03:39:55,271 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:40:28] 2025-07-27 03:39:55,271 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:40:28] 2025-07-27 03:39:55,278 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:40:28] 2025-07-27 03:39:55,279 | INFO     | sum of square deviations: 14954378146.93132
[2025-07-26 23:40:28] 2025-07-27 03:39:55,283 | INFO     | sum of deviations: 24332508725.05497
[2025-07-26 23:40:28] 2025-07-27 03:39:55,284 | INFO     | mean x: 1753576473.0137362
[2025-07-26 23:40:28] 2025-07-27 03:39:55,284 | INFO     | mean y: 2151957.989010989
[2025-07-26 23:40:28] 2025-07-27 03:39:55,284 | INFO     | -- intersect: -2851120469.0168314
[2025-07-26 23:40:28] 2025-07-27 03:39:55,284 | INFO     | intersect: -2851120469.0168314
[2025-07-26 23:40:28] 2025-07-27 03:39:55,285 | INFO     | chi2: 3.249325894095311
[2025-07-26 23:40:28] 2025-07-27 03:39:55,285 | INFO     | sum of square deviations: 14346547183.66581
[2025-07-26 23:40:28] 2025-07-27 03:39:55,289 | INFO     | sum of deviations: 44187738546.39554
[2025-07-26 23:40:28] 2025-07-27 03:39:55,289 | INFO     | mean x: 1753576320.5153203
[2025-07-26 23:40:28] 2025-07-27 03:39:55,290 | INFO     | mean y: 2156885.4735376043
[2025-07-26 23:40:28] 2025-07-27 03:39:55,290 | INFO     | -- intersect: -5398903800.4246855
[2025-07-26 23:40:28] 2025-07-27 03:39:55,290 | INFO     | intersect: -5398903800.4246855
[2025-07-26 23:40:28] 2025-07-27 03:39:55,290 | INFO     | chi2: 2.5867984794596084
[2025-07-26 23:40:28] 2025-07-27 03:39:55,290 | INFO     | current chi2=2.5867984794596084 (change=20.389688083908425 %)
[2025-07-26 23:40:28] 2025-07-27 03:39:55,291 | INFO     | right removable region: 358
[2025-07-26 23:40:28] 2025-07-27 03:39:55,291 | INFO     | sum of square deviations: 14346477155.593273
[2025-07-26 23:40:28] 2025-07-27 03:39:55,295 | INFO     | sum of deviations: -36961889817.682495
[2025-07-26 23:40:28] 2025-07-27 03:39:55,295 | INFO     | mean x: 1753576625.5208914
[2025-07-26 23:40:28] 2025-07-27 03:39:55,295 | INFO     | mean y: 2167273.7576601673
[2025-07-26 23:40:28] 2025-07-27 03:39:55,296 | INFO     | -- intersect: 4520036386.600947
[2025-07-26 23:40:28] 2025-07-27 03:39:55,296 | INFO     | intersect: 4520036386.600947
[2025-07-26 23:40:28] 2025-07-27 03:39:55,296 | INFO     | chi2: 1.4748511244857854
[2025-07-26 23:40:28] 2025-07-27 03:39:55,296 | INFO     | current chi2=1.4748511244857854 (change=54.610550847919214 %)
[2025-07-26 23:40:28] 2025-07-27 03:39:55,297 | INFO     | sum of square deviations: 13755317949.819279
[2025-07-26 23:40:28] 2025-07-27 03:39:55,301 | INFO     | sum of deviations: -45004297111.0622
[2025-07-26 23:40:28] 2025-07-27 03:39:55,301 | INFO     | mean x: 1753576778.022599
[2025-07-26 23:40:28] 2025-07-27 03:39:55,301 | INFO     | mean y: 2169341.1327683614
[2025-07-26 23:40:28] 2025-07-27 03:39:55,301 | INFO     | -- intersect: 5739476949.222269
[2025-07-26 23:40:28] 2025-07-27 03:39:55,301 | INFO     | intersect: 5739476949.222269
[2025-07-26 23:40:28] 2025-07-27 03:39:55,302 | INFO     | chi2: 1.4263292403586108
[2025-07-26 23:40:28] 2025-07-27 03:39:55,302 | INFO     | current chi2=1.4263292403586108 (change=3.289951326042622 %)
[2025-07-26 23:40:28] 2025-07-27 03:39:55,302 | INFO     | left removable region: 20
[2025-07-26 23:40:28] 2025-07-27 03:39:55,303 | INFO     | sum of square deviations: 11973213982.925936
[2025-07-26 23:40:28] 2025-07-27 03:39:55,306 | INFO     | sum of deviations: -3934178098.2189593
[2025-07-26 23:40:28] 2025-07-27 03:39:55,306 | INFO     | mean x: 1753576900.014793
[2025-07-26 23:40:28] 2025-07-27 03:39:55,307 | INFO     | mean y: 2168591.4437869824
[2025-07-26 23:40:28] 2025-07-27 03:39:55,307 | INFO     | -- intersect: 578361737.5296128
[2025-07-26 23:40:28] 2025-07-27 03:39:55,307 | INFO     | intersect: 578361737.5296128
[2025-07-26 23:40:28] 2025-07-27 03:39:55,307 | INFO     | chi2: 0.6417653361612335
[2025-07-26 23:40:28] 2025-07-27 03:39:55,308 | INFO     | -- intersect: 578361737.5296128
[2025-07-26 23:40:28] 2025-07-27 03:39:55,308 | INFO     | current memory leak: -0.33 B/s (using 338 data points, chi2=0.64)
[2025-07-26 23:40:28] 2025-07-27 03:39:55,309 | INFO     | could have reported an average CPU frequency of 2720 MHz (16 samples)
[2025-07-26 23:40:28] 2025-07-27 03:39:55,309 | INFO     | ..............................
[2025-07-26 23:40:28] 2025-07-27 03:39:55,309 | INFO     | . Timing measurements:
[2025-07-26 23:40:28] 2025-07-27 03:39:55,309 | INFO     | . get job = 0 s
[2025-07-26 23:40:28] 2025-07-27 03:39:55,309 | INFO     | . initial setup = 5 s
[2025-07-26 23:40:28] 2025-07-27 03:39:55,309 | INFO     | . payload setup = 28 s
[2025-07-26 23:40:28] 2025-07-27 03:39:55,309 | INFO     | . stage-in = 0 s
[2025-07-26 23:40:28] 2025-07-27 03:39:55,309 | INFO     | . payload execution = 22197 s
[2025-07-26 23:40:28] 2025-07-27 03:39:55,309 | INFO     | . stage-out = 3 s
[2025-07-26 23:40:28] 2025-07-27 03:39:55,309 | INFO     | . log creation = 0 s
[2025-07-26 23:40:28] 2025-07-27 03:39:55,310 | INFO     | ..............................
[2025-07-26 23:40:28] 2025-07-27 03:39:55,406 | INFO     | 
[2025-07-26 23:40:28] 2025-07-27 03:39:55,406 | INFO     | job summary report
[2025-07-26 23:40:28] 2025-07-27 03:39:55,406 | INFO     | --------------------------------------------------
[2025-07-26 23:40:28] 2025-07-27 03:39:55,406 | INFO     | PanDA job id: 6745230480
[2025-07-26 23:40:28] 2025-07-27 03:39:55,406 | INFO     | task id: 45743349
[2025-07-26 23:40:28] 2025-07-27 03:39:55,406 | INFO     | errors: (none)
[2025-07-26 23:40:28] 2025-07-27 03:39:55,406 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:40:28] 2025-07-27 03:39:55,406 | INFO     | pilot state: finished 
[2025-07-26 23:40:28] 2025-07-27 03:39:55,406 | INFO     | transexitcode: 0
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | exeerrorcode: 0
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | exeerrordiag: 
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | exitcode: 0
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | exitmsg: OK
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | cpuconsumptiontime: 54762 s
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | nevents: 400
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | neventsw: 0
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | pid: 3381863
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | pgrp: 3381863
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | corecount: 8
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | event service: False
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | sizes: {0: 2397248, 1: 2397304, 2: 2397332, 3: 2397559, 15: 2397559, 26: 2397587, 37: 2398005, 49: 2398033, 22229: 2432053, 22230: 2432052, 22233: 2441106, 22234: 
[2025-07-26 23:40:28] 2025-07-27 03:39:55,407 | INFO     | --------------------------------------------------
[2025-07-26 23:40:28] 2025-07-27 03:39:55,408 | INFO     | 
[2025-07-26 23:40:28] 2025-07-27 03:39:55,408 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 23:40:28] 2025-07-27 03:39:55,528 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,529 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,531 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:40:28] 2025-07-27 03:39:55,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,531 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:40:28] 2025-07-27 03:39:55,531 | INFO     | job 6745230480 has completed (purged errors)
[2025-07-26 23:40:28] 2025-07-27 03:39:55,531 | INFO     | overall cleanup function is called
[2025-07-26 23:40:28] 2025-07-27 03:39:56,567 | INFO     | --- collectZombieJob: --- 10, [3381863]
[2025-07-26 23:40:28] 2025-07-27 03:39:56,567 | INFO     | zombie collector waiting for pid 3381863
[2025-07-26 23:40:28] 2025-07-27 03:39:56,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:40:28] 2025-07-27 03:39:56,567 | INFO     | collected zombie processes
[2025-07-26 23:40:28] 2025-07-27 03:39:56,567 | INFO     | will attempt to kill all subprocesses of pid=3381863
[2025-07-26 23:40:28] 2025-07-27 03:39:56,930 | INFO     | process IDs to be killed: [3381863] (in reverse order)
[2025-07-26 23:40:28] 2025-07-27 03:39:57,043 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:40:28] 2025-07-27 03:39:57,044 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:40:28] 2025-07-27 03:39:57,058 | INFO     | did not find any defunct processes belonging to 3381863
[2025-07-26 23:40:28] 2025-07-27 03:39:57,071 | INFO     | did not find any defunct processes belonging to 3381863
[2025-07-26 23:40:28] 2025-07-27 03:39:57,071 | INFO     | ready for new job
[2025-07-26 23:40:28] 2025-07-27 03:39:57,071 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:40:28] 2025-07-27 03:39:57,073 | INFO     | ***************************************
[2025-07-26 23:40:28] 2025-07-27 03:39:57,073 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:40:28] 2025-07-27 03:39:57,073 | INFO     | ***************************************
[2025-07-26 23:40:28] 2025-07-27 03:39:57,074 | INFO     | 
[2025-07-26 23:40:28] 2025-07-27 03:39:57,095 | INFO     | architecture information:
[2025-07-26 23:40:28] 2025-07-27 03:39:57,096 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:40:28] 2025-07-27 03:39:57,116 | INFO     | cat /etc/os-release:
[2025-07-26 23:40:28] NAME="CentOS Linux"
[2025-07-26 23:40:28] VERSION="7 (Core)"
[2025-07-26 23:40:28] ID="centos"
[2025-07-26 23:40:28] ID_LIKE="rhel fedora"
[2025-07-26 23:40:28] VERSION_ID="7"
[2025-07-26 23:40:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:40:28] ANSI_COLOR="0;31"
[2025-07-26 23:40:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:40:28] HOME_URL="https://www.centos.org/"
[2025-07-26 23:40:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:40:28] 
[2025-07-26 23:40:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:40:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:40:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:40:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:40:28] 
[2025-07-26 23:40:28] 2025-07-27 03:39:57,116 | INFO     | ***************************************
[2025-07-26 23:40:28] 2025-07-27 03:39:57,638 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 23:40:28] 2025-07-27 03:39:57,710 | INFO     | sufficient remaining disk space (76272369664 B)
[2025-07-26 23:40:28] 2025-07-27 03:39:57,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:40:28] 2025-07-27 03:39:57,711 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:40:28] 2025-07-27 03:39:57,711 | INFO     | update_server=False
[2025-07-26 23:40:28] 2025-07-27 03:39:57,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:40:28] 2025-07-27 03:39:57,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:40:28] 2025-07-27 03:39:57,711 | INFO     | aborting loop
[2025-07-26 23:40:28] 2025-07-27 03:39:57,746 | INFO     | all job control threads have been joined
[2025-07-26 23:40:28] 2025-07-27 03:39:57,897 | INFO     | all data control threads have been joined
[2025-07-26 23:40:28] 2025-07-27 03:39:58,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:40:28] 2025-07-27 03:39:58,717 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:39:58,717 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:39:58,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:40:28] 2025-07-27 03:39:58,752 | INFO     | [job] control thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:39:58,903 | INFO     | [data] control thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:39:59,030 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:39:59,059 | INFO     | all payload control threads have been joined
[2025-07-26 23:40:28] 2025-07-27 03:39:59,191 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:39:59,464 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:39:59,591 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:39:59,606 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:39:59,679 | INFO     | [job] validate thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:39:59,762 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:40:00,065 | INFO     | [payload] control thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:40:00,208 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:40:00,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:40:28] 2025-07-27 03:40:00,738 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:40:01,426 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:40:02,456 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:40:28] 2025-07-27 03:40:03,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139721785169728)>', '<ExcThread(monitor, started 139721275578112)>']
[2025-07-26 23:40:28] 2025-07-27 03:40:08,241 | INFO     | all workflow threads have been joined
[2025-07-26 23:40:28] 2025-07-27 03:40:08,241 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:40:28] 2025-07-27 03:40:08,241 | INFO     | traces error code: 0
[2025-07-26 23:40:28] 2025-07-27 03:40:08,242 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:40:28] 2025-07-27 03:40:28,004 | INFO     | PID=3368061 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 23:40:28] 2025-07-27 03:40:28,004 | INFO     | .. there are 23 such processes running
[2025-07-26 23:40:28] 2025-07-27 03:40:28,004 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:40:28] 2025-07-27 03:40:28,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:40:28] 2025-07-27 03:40:28,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:40:28] 2025-07-27 03:40:28,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:40:28] 2025-07-27 03:40:28,004 | INFO     | [monitor] control thread has ended
[2025-07-26 23:40:28] 2025-07-27 03:40:28,340 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:40:28] 2025-07-27 03:40:28,362 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:40:28] 2025-07-27 03:40:28,377 [wrapper] pilotpid: 3368061
[2025-07-26 23:40:28] 2025-07-27 03:40:28,381 [wrapper] Pilot exit status: 0
[2025-07-26 23:40:28] 2025-07-27 03:40:28,422 [wrapper] pandaids: 6745230480
[2025-07-26 23:40:28] 2025-07-27 03:40:28,524 [wrapper] cleanup supervisor_pilot  868532 3368062
[2025-07-26 23:40:28] 2025-07-27 03:40:28,537 [wrapper] Test setup, not cleaning
[2025-07-26 23:40:28] 2025-07-27 03:40:28,542 [wrapper] apfmon messages muted
[2025-07-26 23:40:28] 2025-07-27 03:40:28,547 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:40:28] 2025-07-27 03:40:28,553 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:40:28]  *** Error codes and diagnostics ***
[2025-07-26 23:40:28]     "exeErrorCode": 0,
[2025-07-26 23:40:28]     "exeErrorDiag": "",
[2025-07-26 23:40:28]     "pilotErrorCode": 0,
[2025-07-26 23:40:28]     "pilotErrorDiag": "",
[2025-07-26 23:40:28]  *** Listing of results directory ***
[2025-07-26 23:40:28] total 356824
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 11:29 pilot3.tar.gz
[2025-07-26 23:40:28] -rwx------. 1 boincer umatlas     36292 Jul 26 11:46 runpilot2-wrapper.sh
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 11:46 queuedata.json
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas       100 Jul 26 17:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:40:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 17:26 run_atlas
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas       105 Jul 26 17:26 job.xml
[2025-07-26 23:40:28] -rw-r--r--. 2 boincer umatlas 143123831 Jul 26 17:26 EVNT.45743347._002305.pool.root.1
[2025-07-26 23:40:28] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 17:26 start_atlas.sh
[2025-07-26 23:40:28] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 17:26 shared
[2025-07-26 23:40:28] -rw-r--r--. 2 boincer umatlas    542891 Jul 26 17:26 input.tar.gz
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas         0 Jul 26 17:26 boinc_lockfile
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 17:26 pandaJob.out
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas    980125 Jul 26 17:27 agis_schedconf.cvmfs.json
[2025-07-26 23:40:28] drwx------. 4 boincer umatlas      4096 Jul 26 17:27 pilot3
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas      6856 Jul 26 23:36 init_data.xml
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas 214101575 Jul 26 23:38 HITS.45743349._040377.pool.root.1
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas       531 Jul 26 23:38 boinc_task_state.xml
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas      1041 Jul 26 23:39 memory_monitor_summary.json
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas   1593052 Jul 26 23:39 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas    451477 Jul 26 23:39 log.45743349._040377.job.log.tgz.1
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas        95 Jul 26 23:39 pilot_heartbeat.json
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas      7821 Jul 26 23:39 heartbeat.json
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas        28 Jul 26 23:40 wrapper_checkpoint.txt
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:40 boinc_mmap_file
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas       823 Jul 26 23:40 pilotlog.txt
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas   1693027 Jul 26 23:40 log.45743349._040377.job.log.1
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas       357 Jul 26 23:40 output.list
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:40 runtime_log
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas   2160640 Jul 26 23:40 result.tar.gz
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas      8661 Jul 26 23:40 runtime_log.err
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas       657 Jul 26 23:40 RNMODmJHwz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmc20KDmJL0oQm.diag
[2025-07-26 23:40:28] -rw-r--r--. 1 boincer umatlas     21291 Jul 26 23:40 stderr.txt
[2025-07-26 23:40:28] HITS file was successfully produced:
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas 214101575 Jul 26 23:38 shared/HITS.pool.root.1
[2025-07-26 23:40:28]  *** Contents of shared directory: ***
[2025-07-26 23:40:28] total 351520
[2025-07-26 23:40:28] -rw-r--r--. 2 boincer umatlas 143123831 Jul 26 17:26 ATLAS.root_0
[2025-07-26 23:40:28] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 17:26 start_atlas.sh
[2025-07-26 23:40:28] -rw-r--r--. 2 boincer umatlas    542891 Jul 26 17:26 input.tar.gz
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas 214101575 Jul 26 23:38 HITS.pool.root.1
[2025-07-26 23:40:28] -rw-------. 1 boincer umatlas   2160640 Jul 26 23:40 result.tar.gz
23:40:30 (3358804): run_atlas exited; CPU time 55583.050157
23:40:30 (3358804): called boinc_finish(0)

</stderr_txt>
]]>

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