Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:08:04 (32631): wrapper (7.7.26015): starting
17:08:04 (32631): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 17:08:04] Arguments: --nthreads 8
[2025-07-26 17:08:04] Threads: 8
[2025-07-26 17:08:04] Checking for CVMFS
[2025-07-26 17:08:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 17:08:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 17:08:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 17:08:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 17:08:04] 2.11.2.0 3213 516018 245040 148788 3 188 19903904 20275201 917 130560 0 178420673 99.988 22503475 19699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 17:08:04] CVMFS is ok
[2025-07-26 17:08:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 17:08:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 17:08:04] Further information can be found at the LHC@home message board.
[2025-07-26 17:08:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 17:08:04] Checking for apptainer binary...
[2025-07-26 17:08:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 17:08:04] Running /usr/bin/apptainer --version
[2025-07-26 17:08:04] apptainer version 1.3.2-1.el7
[2025-07-26 17:08:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 17:08:04] c-205-38.aglt2.org
[2025-07-26 17:08:04] apptainer works
[2025-07-26 17:08:04] Set ATHENA_PROC_NUMBER=8
[2025-07-26 17:08:04] Set ATHENA_CORE_NUMBER=8
[2025-07-26 17:08:05] Starting ATLAS job with PandaID=6745245562
[2025-07-26 17:08:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 18:11:29]  *** The last 200 lines of the pilot log: ***
[2025-07-26 18:11:29]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745245562/log.45743349._040545.job.log.tgz.1
[2025-07-26 18:11:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/ec/log.45743349._040545.job.log.tgz.1
[2025-07-26 18:11:29]  workdir=None
[2025-07-26 18:11:29] ]
[2025-07-26 18:11:29] 2025-07-26 22:10:53,905 | INFO     | transferring file log.45743349._040545.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745245562/log.45743349._040545.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 18:11:29] 2025-07-26 22:10:53,905 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745245562/log.45743349._040545.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._040545.job
[2025-07-26 18:11:29] 2025-07-26 22:10:53,920 | INFO     | adding to output.list: log.45743349._040545.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/ec/log.45743349._040545.job.log.tg
[2025-07-26 18:11:29] 2025-07-26 22:10:53,921 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 18:11:29] 2025-07-26 22:10:53,921 | INFO     | summary of transferred files:
[2025-07-26 18:11:29] 2025-07-26 22:10:53,921 | INFO     |  -- lfn=log.45743349._040545.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 18:11:29] 2025-07-26 22:10:53,921 | INFO     | stage-out finished correctly
[2025-07-26 18:11:29] 2025-07-26 22:10:54,000 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 18:11:29] 2025-07-26 22:10:54,965 | INFO     | job 6745245562 has state=finished
[2025-07-26 18:11:29] 2025-07-26 22:10:54,965 | INFO     | preparing for final server update for job 6745245562 in state='finished'
[2025-07-26 18:11:29] 2025-07-26 22:10:54,966 | INFO     | this job has now completed (state=finished)
[2025-07-26 18:11:29] 2025-07-26 22:10:54,966 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 18:11:29] 2025-07-26 22:10:54,966 | INFO     | log transfer has been attempted: DONE
[2025-07-26 18:11:29] 2025-07-26 22:10:54,966 | INFO     | job 6745245562 has finished - writing final server update
[2025-07-26 18:11:29] 2025-07-26 22:10:54,966 | INFO     | total number of processed events: 400 (read)
[2025-07-26 18:11:29] 2025-07-26 22:10:54,967 | INFO     | executing command: lscpu
[2025-07-26 18:11:29] 2025-07-26 22:10:54,995 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 18:11:29] 2025-07-26 22:10:55,185 | WARNING  | process 10351 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 18:11:29] 2025-07-26 22:10:55,186 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745245562/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 18:11:29] 2025-07-26 22:10:55,186 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745245562/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 18:11:29] 2025-07-26 22:10:55,187 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3300446 B
[2025-07-26 18:11:29] 2025-07-26 22:10:55,187 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16255 B
[2025-07-26 18:11:29] 2025-07-26 22:10:55,187 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 18:11:29] 2025-07-26 22:10:57,258 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 18:11:29] 2025-07-26 22:10:57,266 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2530.212125
[2025-07-26 18:11:29] 2025-07-26 22:10:57,270 | INFO     | sufficient remaining disk space (32720814080 B)
[2025-07-26 18:11:29] 2025-07-26 22:10:57,270 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-26 18:11:29] 2025-07-26 22:10:57,271 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745245562/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 18:11:29] 2025-07-26 22:10:57,271 | INFO     | extracted standard info from prmon json
[2025-07-26 18:11:29] 2025-07-26 22:10:57,271 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 18:11:29] 2025-07-26 22:10:57,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 18:11:29] 2025-07-26 22:10:57,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 18:11:29] 2025-07-26 22:10:57,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 18:11:29] 2025-07-26 22:10:57,273 | INFO     | fitting pss+swap vs Time
[2025-07-26 18:11:29] 2025-07-26 22:10:57,273 | INFO     | sum of square deviations: 51573060.0
[2025-07-26 18:11:29] 2025-07-26 22:10:57,273 | INFO     | sum of deviations: -76705120.99999991
[2025-07-26 18:11:29] 2025-07-26 22:10:57,273 | INFO     | mean x: 1753566065.0
[2025-07-26 18:11:29] 2025-07-26 22:10:57,273 | INFO     | mean y: 2529041.4909090907
[2025-07-26 18:11:29] 2025-07-26 22:10:57,273 | INFO     | -- intersect: 2610625152.0827317
[2025-07-26 18:11:29] 2025-07-26 22:10:57,273 | INFO     | intersect: 2610625152.0827317
[2025-07-26 18:11:29] 2025-07-26 22:10:57,274 | INFO     | chi2: 0.006215574293889573
[2025-07-26 18:11:29] 2025-07-26 22:10:57,274 | INFO     | -- intersect: 2610625152.0827317
[2025-07-26 18:11:29] 2025-07-26 22:10:57,274 | INFO     | current memory leak: -1.49 B/s (using 55 data points, chi2=0.01)
[2025-07-26 18:11:29] 2025-07-26 22:10:57,274 | INFO     | could have reported an average CPU frequency of 3022 MHz (6 samples)
[2025-07-26 18:11:29] 2025-07-26 22:10:57,274 | INFO     | ..............................
[2025-07-26 18:11:29] 2025-07-26 22:10:57,274 | INFO     | . Timing measurements:
[2025-07-26 18:11:29] 2025-07-26 22:10:57,274 | INFO     | . get job = 0 s
[2025-07-26 18:11:29] 2025-07-26 22:10:57,274 | INFO     | . initial setup = 2 s
[2025-07-26 18:11:29] 2025-07-26 22:10:57,274 | INFO     | . payload setup = 4 s
[2025-07-26 18:11:29] 2025-07-26 22:10:57,274 | INFO     | . stage-in = 0 s
[2025-07-26 18:11:29] 2025-07-26 22:10:57,274 | INFO     | . payload execution = 3739 s
[2025-07-26 18:11:29] 2025-07-26 22:10:57,275 | INFO     | . stage-out = 0 s
[2025-07-26 18:11:29] 2025-07-26 22:10:57,275 | INFO     | . log creation = 0 s
[2025-07-26 18:11:29] 2025-07-26 22:10:57,275 | INFO     | ..............................
[2025-07-26 18:11:29] 2025-07-26 22:10:57,319 | INFO     | 
[2025-07-26 18:11:29] 2025-07-26 22:10:57,319 | INFO     | job summary report
[2025-07-26 18:11:29] 2025-07-26 22:10:57,319 | INFO     | --------------------------------------------------
[2025-07-26 18:11:29] 2025-07-26 22:10:57,320 | INFO     | PanDA job id: 6745245562
[2025-07-26 18:11:29] 2025-07-26 22:10:57,320 | INFO     | task id: 45743349
[2025-07-26 18:11:29] 2025-07-26 22:10:57,320 | INFO     | errors: (none)
[2025-07-26 18:11:29] 2025-07-26 22:10:57,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 18:11:29] 2025-07-26 22:10:57,320 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6745245562: 3594706 B (within 2537553920 B limit)
[2025-07-26 18:11:29] 2025-07-26 22:10:57,321 | INFO     | pilot state: finished 
[2025-07-26 18:11:29] 2025-07-26 22:10:57,321 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6745245562/HITS.45743349._040545.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-26 18:11:29] 2025-07-26 22:10:57,321 | INFO     | transexitcode: 0
[2025-07-26 18:11:29] 2025-07-26 22:10:57,321 | INFO     | total size of present files: 0 B (workdir size: 3594706 B)
[2025-07-26 18:11:29] 2025-07-26 22:10:57,321 | INFO     | exeerrorcode: 0
[2025-07-26 18:11:29] 2025-07-26 22:10:57,322 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6745245562/HITS.45743349._040545.pool.root.1 since it does not exist
[2025-07-26 18:11:29] 2025-07-26 22:10:57,322 | INFO     | exeerrordiag: 
[2025-07-26 18:11:29] 2025-07-26 22:10:57,322 | INFO     | exitcode: 0
[2025-07-26 18:11:29] 2025-07-26 22:10:57,323 | INFO     | exitmsg: OK
[2025-07-26 18:11:29] 2025-07-26 22:10:57,323 | INFO     | cpuconsumptiontime: 27764 s
[2025-07-26 18:11:29] 2025-07-26 22:10:57,323 | INFO     | nevents: 400
[2025-07-26 18:11:29] 2025-07-26 22:10:57,323 | INFO     | neventsw: 0
[2025-07-26 18:11:29] 2025-07-26 22:10:57,323 | INFO     | pid: 10351
[2025-07-26 18:11:29] 2025-07-26 22:10:57,323 | INFO     | pgrp: 10351
[2025-07-26 18:11:29] 2025-07-26 22:10:57,324 | INFO     | corecount: 8
[2025-07-26 18:11:29] 2025-07-26 22:10:57,324 | INFO     | event service: False
[2025-07-26 18:11:29] 2025-07-26 22:10:57,324 | INFO     | sizes: {0: 2397418, 3: 2397680, 11: 2397708, 3747: 2423573, 3748: 2423572, 3749: 2432810, 3752: 2432948}
[2025-07-26 18:11:29] 2025-07-26 22:10:57,324 | INFO     | --------------------------------------------------
[2025-07-26 18:11:29] 2025-07-26 22:10:57,324 | INFO     | 
[2025-07-26 18:11:29] 2025-07-26 22:10:57,325 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 18:11:29] 2025-07-26 22:10:57,341 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,341 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,341 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,342 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 18:11:29] 2025-07-26 22:10:57,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 18:11:29] 2025-07-26 22:10:57,345 | INFO     | job 6745245562 has completed (purged errors)
[2025-07-26 18:11:29] 2025-07-26 22:10:57,345 | INFO     | overall cleanup function is called
[2025-07-26 18:11:29] 2025-07-26 22:10:57,412 | INFO     | number of running child processes to parent process 10351: 1
[2025-07-26 18:11:29] 2025-07-26 22:10:57,412 | INFO     | maximum number of monitored processes: 6
[2025-07-26 18:11:29] 2025-07-26 22:10:57,412 | INFO     | aborting job monitoring since job object (job id=6745245562) has expired
[2025-07-26 18:11:29] 2025-07-26 22:10:58,353 | INFO     | --- collectZombieJob: --- 10, [10351]
[2025-07-26 18:11:29] 2025-07-26 22:10:58,354 | INFO     | zombie collector waiting for pid 10351
[2025-07-26 18:11:29] 2025-07-26 22:10:58,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 18:11:29] 2025-07-26 22:10:58,354 | INFO     | collected zombie processes
[2025-07-26 18:11:29] 2025-07-26 22:10:58,354 | INFO     | will attempt to kill all subprocesses of pid=10351
[2025-07-26 18:11:29] 2025-07-26 22:10:58,446 | INFO     | process IDs to be killed: [10351] (in reverse order)
[2025-07-26 18:11:29] 2025-07-26 22:10:58,495 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 18:11:29] 2025-07-26 22:10:58,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 18:11:29] 2025-07-26 22:10:58,498 | INFO     | did not find any defunct processes belonging to 10351
[2025-07-26 18:11:29] 2025-07-26 22:10:58,500 | INFO     | did not find any defunct processes belonging to 10351
[2025-07-26 18:11:29] 2025-07-26 22:10:58,500 | INFO     | ready for new job
[2025-07-26 18:11:29] 2025-07-26 22:10:58,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 18:11:29] 2025-07-26 22:10:58,502 | INFO     | ***************************************
[2025-07-26 18:11:29] 2025-07-26 22:10:58,502 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 18:11:29] 2025-07-26 22:10:58,502 | INFO     | ***************************************
[2025-07-26 18:11:29] 2025-07-26 22:10:58,502 | INFO     | 
[2025-07-26 18:11:29] 2025-07-26 22:10:58,503 | INFO     | architecture information:
[2025-07-26 18:11:29] 2025-07-26 22:10:58,503 | INFO     | executing command: cat /etc/os-release
[2025-07-26 18:11:29] 2025-07-26 22:10:58,517 | INFO     | cat /etc/os-release:
[2025-07-26 18:11:29] NAME="CentOS Linux"
[2025-07-26 18:11:29] VERSION="7 (Core)"
[2025-07-26 18:11:29] ID="centos"
[2025-07-26 18:11:29] ID_LIKE="rhel fedora"
[2025-07-26 18:11:29] VERSION_ID="7"
[2025-07-26 18:11:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 18:11:29] ANSI_COLOR="0;31"
[2025-07-26 18:11:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 18:11:29] HOME_URL="https://www.centos.org/"
[2025-07-26 18:11:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 18:11:29] 
[2025-07-26 18:11:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 18:11:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 18:11:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 18:11:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 18:11:29] 
[2025-07-26 18:11:29] 2025-07-26 22:10:58,517 | INFO     | ***************************************
[2025-07-26 18:11:29] 2025-07-26 22:10:59,020 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 18:11:29] 2025-07-26 22:10:59,038 | INFO     | sufficient remaining disk space (32725008384 B)
[2025-07-26 18:11:29] 2025-07-26 22:10:59,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 18:11:29] 2025-07-26 22:10:59,039 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 18:11:29] 2025-07-26 22:10:59,039 | INFO     | update_server=False
[2025-07-26 18:11:29] 2025-07-26 22:10:59,039 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 18:11:29] 2025-07-26 22:10:59,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:11:29] 2025-07-26 22:10:59,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:11:29] 2025-07-26 22:10:59,040 | INFO     | aborting loop
[2025-07-26 18:11:29] 2025-07-26 22:10:59,194 | INFO     | all data control threads have been joined
[2025-07-26 18:11:29] 2025-07-26 22:10:59,382 | INFO     | all payload control threads have been joined
[2025-07-26 18:11:29] 2025-07-26 22:10:59,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 18:11:29] 2025-07-26 22:11:00,041 | INFO     | [job] retrieve thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:00,045 | INFO     | [job] queue monitor thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:00,046 | INFO     | [job] job monitor thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:00,080 | INFO     | all job control threads have been joined
[2025-07-26 18:11:29] 2025-07-26 22:11:00,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 18:11:29] 2025-07-26 22:11:00,200 | INFO     | [data] control thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:00,387 | INFO     | [payload] control thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:00,516 | INFO     | [payload] validate_post thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:00,847 | INFO     | [data] copytool_in thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:00,910 | INFO     | [job] validate thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:01,006 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:01,084 | INFO     | [job] control thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:01,202 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:01,219 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:01,505 | INFO     | [payload] failed_post thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:01,510 | INFO     | [data] copytool_out thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:04,090 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:10,047 | INFO     | job.realtimelogging is not enabled
[2025-07-26 18:11:29] 2025-07-26 22:11:11,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 18:11:29] 2025-07-26 22:11:11,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140302967035712)>', '<ExcThread(monitor, started 140302530627328)>']
[2025-07-26 18:11:29] 2025-07-26 22:11:16,355 | INFO     | all workflow threads have been joined
[2025-07-26 18:11:29] 2025-07-26 22:11:16,355 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 18:11:29] 2025-07-26 22:11:16,356 | INFO     | traces error code: 0
[2025-07-26 18:11:29] 2025-07-26 22:11:16,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 18:11:29] 2025-07-26 22:11:29,137 | INFO     | PID=3908 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 18:11:29] 2025-07-26 22:11:29,137 | INFO     | .. there are 2 such processes running
[2025-07-26 18:11:29] 2025-07-26 22:11:29,137 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 18:11:29] 2025-07-26 22:11:29,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 18:11:29] 2025-07-26 22:11:29,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 18:11:29] 2025-07-26 22:11:29,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 18:11:29] 2025-07-26 22:11:29,138 | INFO     | [monitor] control thread has ended
[2025-07-26 18:11:29] 2025-07-26 22:11:29,197 [wrapper] ==== pilot stdout END ====
[2025-07-26 18:11:29] 2025-07-26 22:11:29,200 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 18:11:29] 2025-07-26 22:11:29,204 [wrapper] pilotpid: 3908
[2025-07-26 18:11:29] 2025-07-26 22:11:29,206 [wrapper] Pilot exit status: 0
[2025-07-26 18:11:29] 2025-07-26 22:11:29,216 [wrapper] pandaids: 6745245562
[2025-07-26 18:11:29] 2025-07-26 22:11:29,244 [wrapper] cleanup supervisor_pilot 21716 3909
[2025-07-26 18:11:29] 2025-07-26 22:11:29,247 [wrapper] Test setup, not cleaning
[2025-07-26 18:11:29] 2025-07-26 22:11:29,250 [wrapper] apfmon messages muted
[2025-07-26 18:11:29] 2025-07-26 22:11:29,252 [wrapper] ==== wrapper stdout END ====
[2025-07-26 18:11:29] 2025-07-26 22:11:29,254 [wrapper] ==== wrapper stderr END ====
[2025-07-26 18:11:29]  *** Error codes and diagnostics ***
[2025-07-26 18:11:29]     "exeErrorCode": 0,
[2025-07-26 18:11:29]     "exeErrorDiag": "",
[2025-07-26 18:11:29]     "pilotErrorCode": 0,
[2025-07-26 18:11:29]     "pilotErrorDiag": "",
[2025-07-26 18:11:29]  *** Listing of results directory ***
[2025-07-26 18:11:29] total 443996
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 11:50 pilot3.tar.gz
[2025-07-26 18:11:29] -rwx------ 1 boincer umatlas     36292 Jul 26 12:04 runpilot2-wrapper.sh
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 12:04 queuedata.json
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas       100 Jul 26 17:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 18:11:29] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 17:08 run_atlas
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas       105 Jul 26 17:08 job.xml
[2025-07-26 18:11:29] -rw-r--r-- 2 boincer umatlas 230148052 Jul 26 17:08 EVNT.45743347._000147.pool.root.1
[2025-07-26 18:11:29] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 17:08 start_atlas.sh
[2025-07-26 18:11:29] drwxrwx--x 2 boincer umatlas      4096 Jul 26 17:08 shared
[2025-07-26 18:11:29] -rw-r--r-- 2 boincer umatlas    542883 Jul 26 17:08 input.tar.gz
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas         0 Jul 26 17:08 boinc_lockfile
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas      2559 Jul 26 17:08 pandaJob.out
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas    980125 Jul 26 17:08 agis_schedconf.cvmfs.json
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas   1593052 Jul 26 17:08 agis_ddmendpoints.agis.ALL.json
[2025-07-26 18:11:29] drwx------ 4 boincer umatlas      4096 Jul 26 17:08 pilot3
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas      6050 Jul 26 18:09 init_data.xml
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas 219252450 Jul 26 18:10 HITS.45743349._040545.pool.root.1
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas        95 Jul 26 18:10 pilot_heartbeat.json
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas      1055 Jul 26 18:10 memory_monitor_summary.json
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas    299097 Jul 26 18:10 log.45743349._040545.job.log.tgz.1
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas       529 Jul 26 18:10 boinc_task_state.xml
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas      7821 Jul 26 18:10 heartbeat.json
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 18:11 boinc_mmap_file
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas        27 Jul 26 18:11 wrapper_checkpoint.txt
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas       819 Jul 26 18:11 pilotlog.txt
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas    388580 Jul 26 18:11 log.45743349._040545.job.log.1
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas       357 Jul 26 18:11 output.list
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas       620 Jul 26 18:11 runtime_log
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas    706560 Jul 26 18:11 result.tar.gz
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas      8660 Jul 26 18:11 runtime_log.err
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas       656 Jul 26 18:11 bFHNDmwYwz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmf30KDmpM1JGo.diag
[2025-07-26 18:11:29] -rw-r--r-- 1 boincer umatlas     22516 Jul 26 18:11 stderr.txt
[2025-07-26 18:11:29] HITS file was successfully produced:
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas 219252450 Jul 26 18:10 shared/HITS.pool.root.1
[2025-07-26 18:11:29]  *** Contents of shared directory: ***
[2025-07-26 18:11:29] total 440116
[2025-07-26 18:11:29] -rw-r--r-- 2 boincer umatlas 230148052 Jul 26 17:08 ATLAS.root_0
[2025-07-26 18:11:29] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 17:08 start_atlas.sh
[2025-07-26 18:11:29] -rw-r--r-- 2 boincer umatlas    542883 Jul 26 17:08 input.tar.gz
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas 219252450 Jul 26 18:10 HITS.pool.root.1
[2025-07-26 18:11:29] -rw------- 1 boincer umatlas    706560 Jul 26 18:11 result.tar.gz
18:11:30 (32631): run_atlas exited; CPU time 27733.477744
18:11:30 (32631): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN