Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:00:41 (3982244): wrapper (7.7.26015): starting
10:00:41 (3982244): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 10:00:41] Arguments: --nthreads 4
[2025-07-27 10:00:41] Threads: 4
[2025-07-27 10:00:41] Checking for CVMFS
[2025-07-27 10:00:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 10:00:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 10:00:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 10:00:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 10:00:41] 2.9.2.0 2645308 3825 93868 148804 3 57 35103695 36864000 0 130560 0 3537011 99.992 135715 2288 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 10:00:41] CVMFS is ok
[2025-07-27 10:00:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 10:00:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 10:00:41] Further information can be found at the LHC@home message board.
[2025-07-27 10:00:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 10:00:41] Checking for apptainer binary...
[2025-07-27 10:00:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 10:00:41] Running /usr/bin/apptainer --version
[2025-07-27 10:00:41] apptainer version 1.4.1-1.1
[2025-07-27 10:00:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 10:00:41] thA350
[2025-07-27 10:00:41] apptainer works
[2025-07-27 10:00:41] Set ATHENA_PROC_NUMBER=4
[2025-07-27 10:00:41] Set ATHENA_CORE_NUMBER=4
[2025-07-27 10:00:41] Starting ATLAS job with PandaID=6745230289
[2025-07-27 10:00:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 11:13:55]  *** The last 200 lines of the pilot log: ***
[2025-07-27 11:13:55]  is_tar=False
[2025-07-27 11:13:55]  lfn=log.45743349._040186.job.log.tgz.1
[2025-07-27 11:13:55]  mtime=0
[2025-07-27 11:13:55]  protocol_id=None
[2025-07-27 11:13:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 11:13:55]  replicas=None
[2025-07-27 11:13:55]  scope=mc23_13p6TeV
[2025-07-27 11:13:55]  status=None
[2025-07-27 11:13:55]  status_code=0
[2025-07-27 11:13:55]  storage_token=
[2025-07-27 11:13:55]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745230289/log.45743349._040186.job.log.tgz.1
[2025-07-27 11:13:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/d7/log.45743349._040186.job.log.tgz.1
[2025-07-27 11:13:55]  workdir=None
[2025-07-27 11:13:55] ]
[2025-07-27 11:13:55] 2025-07-27 09:13:18,474 | INFO     | transferring file log.45743349._040186.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745230289/log.45743349._040186.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 11:13:55] 2025-07-27 09:13:18,474 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745230289/log.45743349._040186.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0401
[2025-07-27 11:13:55] 2025-07-27 09:13:18,486 | INFO     | adding to output.list: log.45743349._040186.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/d7/log.45743349._040186.job.log.tg
[2025-07-27 11:13:55] 2025-07-27 09:13:18,487 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 11:13:55] 2025-07-27 09:13:18,487 | INFO     | summary of transferred files:
[2025-07-27 11:13:55] 2025-07-27 09:13:18,487 | INFO     |  -- lfn=log.45743349._040186.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 11:13:55] 2025-07-27 09:13:18,487 | INFO     | stage-out finished correctly
[2025-07-27 11:13:55] 2025-07-27 09:13:19,348 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 11:13:55] 2025-07-27 09:13:19,379 | INFO     | job 6745230289 has state=finished
[2025-07-27 11:13:55] 2025-07-27 09:13:19,379 | INFO     | preparing for final server update for job 6745230289 in state='finished'
[2025-07-27 11:13:55] 2025-07-27 09:13:19,379 | INFO     | this job has now completed (state=finished)
[2025-07-27 11:13:55] 2025-07-27 09:13:19,379 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 11:13:55] 2025-07-27 09:13:19,379 | INFO     | log transfer has been attempted: DONE
[2025-07-27 11:13:55] 2025-07-27 09:13:19,379 | INFO     | job 6745230289 has finished - writing final server update
[2025-07-27 11:13:55] 2025-07-27 09:13:19,379 | INFO     | total number of processed events: 400 (read)
[2025-07-27 11:13:55] 2025-07-27 09:13:19,380 | INFO     | executing command: lscpu
[2025-07-27 11:13:55] 2025-07-27 09:13:19,394 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 11:13:55] 2025-07-27 09:13:23,386 | INFO     | PID=3985957 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 11:13:55] 2025-07-27 09:13:23,796 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 11:13:55] 2025-07-27 09:13:23,798 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3569.3373125000003
[2025-07-27 11:13:55] 2025-07-27 09:13:23,799 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745230289/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 11:13:55] 2025-07-27 09:13:23,799 | INFO     | extracted standard info from prmon json
[2025-07-27 11:13:55] 2025-07-27 09:13:23,799 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 11:13:55] 2025-07-27 09:13:23,799 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 11:13:55] 2025-07-27 09:13:23,799 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 11:13:55] 2025-07-27 09:13:23,799 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 11:13:55] 2025-07-27 09:13:23,800 | INFO     | fitting pss+swap vs Time
[2025-07-27 11:13:55] 2025-07-27 09:13:23,800 | INFO     | sum of square deviations: 81266640.0
[2025-07-27 11:13:55] 2025-07-27 09:13:23,800 | INFO     | sum of deviations: -5313166368.0
[2025-07-27 11:13:55] 2025-07-27 09:13:23,800 | INFO     | mean x: 1753605493.5
[2025-07-27 11:13:55] 2025-07-27 09:13:23,800 | INFO     | mean y: 2469932.5
[2025-07-27 11:13:55] 2025-07-27 09:13:23,800 | INFO     | -- intersect: 114652192509.98372
[2025-07-27 11:13:55] 2025-07-27 09:13:23,800 | INFO     | intersect: 114652192509.98372
[2025-07-27 11:13:55] 2025-07-27 09:13:23,800 | INFO     | chi2: 0.1332267560361239
[2025-07-27 11:13:55] 2025-07-27 09:13:23,800 | INFO     | -- intersect: 114652192509.98372
[2025-07-27 11:13:55] 2025-07-27 09:13:23,801 | INFO     | current memory leak: -65.38 B/s (using 64 data points, chi2=0.13)
[2025-07-27 11:13:55] 2025-07-27 09:13:23,801 | INFO     | could have reported an average CPU frequency of 3806 MHz (6 samples)
[2025-07-27 11:13:55] 2025-07-27 09:13:23,801 | INFO     | ..............................
[2025-07-27 11:13:55] 2025-07-27 09:13:23,801 | INFO     | . Timing measurements:
[2025-07-27 11:13:55] 2025-07-27 09:13:23,801 | INFO     | . get job = 0 s
[2025-07-27 11:13:55] 2025-07-27 09:13:23,801 | INFO     | . initial setup = 1 s
[2025-07-27 11:13:55] 2025-07-27 09:13:23,801 | INFO     | . payload setup = 3 s
[2025-07-27 11:13:55] 2025-07-27 09:13:23,801 | INFO     | . stage-in = 0 s
[2025-07-27 11:13:55] 2025-07-27 09:13:23,801 | INFO     | . payload execution = 4330 s
[2025-07-27 11:13:55] 2025-07-27 09:13:23,801 | INFO     | . stage-out = 0 s
[2025-07-27 11:13:55] 2025-07-27 09:13:23,801 | INFO     | . log creation = 0 s
[2025-07-27 11:13:55] 2025-07-27 09:13:23,801 | INFO     | ..............................
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | 
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | job summary report
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | --------------------------------------------------
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | PanDA job id: 6745230289
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | task id: 45743349
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | errors: (none)
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | pilot state: finished 
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | transexitcode: 0
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | exeerrorcode: 0
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | exeerrordiag: 
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | exitcode: 0
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | exitmsg: OK
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | cpuconsumptiontime: 16298 s
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | nevents: 400
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | neventsw: 0
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | pid: 3992564
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | pgrp: 3992564
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | corecount: 4
[2025-07-27 11:13:55] 2025-07-27 09:13:23,831 | INFO     | event service: False
[2025-07-27 11:13:55] 2025-07-27 09:13:23,832 | INFO     | sizes: {0: 2397478, 2: 2397740, 10: 2397768, 4337: 2424005, 4338: 2433009, 4339: 2433065, 4343: 2433387}
[2025-07-27 11:13:55] 2025-07-27 09:13:23,832 | INFO     | --------------------------------------------------
[2025-07-27 11:13:55] 2025-07-27 09:13:23,832 | INFO     | 
[2025-07-27 11:13:55] 2025-07-27 09:13:23,832 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 11:13:55] 2025-07-27 09:13:23,845 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | job 6745230289 has completed (purged errors)
[2025-07-27 11:13:55] 2025-07-27 09:13:23,846 | INFO     | overall cleanup function is called
[2025-07-27 11:13:55] 2025-07-27 09:13:24,322 | WARNING  | process 3992564 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 11:13:55] 2025-07-27 09:13:24,350 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 11:13:55] 2025-07-27 09:13:24,388 | INFO     | number of running child processes to parent process 3992564: 1
[2025-07-27 11:13:55] 2025-07-27 09:13:24,388 | INFO     | maximum number of monitored processes: 6
[2025-07-27 11:13:55] 2025-07-27 09:13:24,388 | INFO     | aborting job monitoring since job object (job id=6745230289) has expired
[2025-07-27 11:13:55] 2025-07-27 09:13:24,853 | INFO     | --- collectZombieJob: --- 10, [3992564]
[2025-07-27 11:13:55] 2025-07-27 09:13:24,853 | INFO     | zombie collector waiting for pid 3992564
[2025-07-27 11:13:55] 2025-07-27 09:13:24,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 11:13:55] 2025-07-27 09:13:24,853 | INFO     | collected zombie processes
[2025-07-27 11:13:55] 2025-07-27 09:13:24,853 | INFO     | will attempt to kill all subprocesses of pid=3992564
[2025-07-27 11:13:55] 2025-07-27 09:13:24,895 | INFO     | process IDs to be killed: [3992564] (in reverse order)
[2025-07-27 11:13:55] 2025-07-27 09:13:24,920 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 11:13:55] 2025-07-27 09:13:24,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 11:13:55] 2025-07-27 09:13:24,921 | INFO     | did not find any defunct processes belonging to 3992564
[2025-07-27 11:13:55] 2025-07-27 09:13:24,922 | INFO     | did not find any defunct processes belonging to 3992564
[2025-07-27 11:13:55] 2025-07-27 09:13:24,922 | INFO     | ready for new job
[2025-07-27 11:13:55] 2025-07-27 09:13:24,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 11:13:55] 2025-07-27 09:13:24,923 | INFO     | ***************************************
[2025-07-27 11:13:55] 2025-07-27 09:13:24,923 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 11:13:55] 2025-07-27 09:13:24,923 | INFO     | ***************************************
[2025-07-27 11:13:55] 2025-07-27 09:13:24,923 | INFO     | 
[2025-07-27 11:13:55] 2025-07-27 09:13:24,923 | INFO     | architecture information:
[2025-07-27 11:13:55] 2025-07-27 09:13:24,923 | INFO     | executing command: cat /etc/os-release
[2025-07-27 11:13:55] 2025-07-27 09:13:24,933 | INFO     | cat /etc/os-release:
[2025-07-27 11:13:55] NAME="CentOS Linux"
[2025-07-27 11:13:55] VERSION="7 (Core)"
[2025-07-27 11:13:55] ID="centos"
[2025-07-27 11:13:55] ID_LIKE="rhel fedora"
[2025-07-27 11:13:55] VERSION_ID="7"
[2025-07-27 11:13:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 11:13:55] ANSI_COLOR="0;31"
[2025-07-27 11:13:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 11:13:55] HOME_URL="https://www.centos.org/"
[2025-07-27 11:13:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 11:13:55] 
[2025-07-27 11:13:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 11:13:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 11:13:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 11:13:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 11:13:55] 
[2025-07-27 11:13:55] 2025-07-27 09:13:24,933 | INFO     | ***************************************
[2025-07-27 11:13:55] 2025-07-27 09:13:25,436 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 11:13:55] 2025-07-27 09:13:25,449 | INFO     | sufficient remaining disk space (364865650688 B)
[2025-07-27 11:13:55] 2025-07-27 09:13:25,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 11:13:55] 2025-07-27 09:13:25,449 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 11:13:55] 2025-07-27 09:13:25,449 | INFO     | update_server=False
[2025-07-27 11:13:55] 2025-07-27 09:13:25,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 11:13:55] 2025-07-27 09:13:25,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 11:13:55] 2025-07-27 09:13:25,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:13:55] 2025-07-27 09:13:25,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 11:13:55] 2025-07-27 09:13:25,450 | INFO     | aborting loop
[2025-07-27 11:13:55] 2025-07-27 09:13:26,455 | INFO     | [job] queue monitor thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:26,455 | INFO     | [job] retrieve thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:26,456 | INFO     | [job] job monitor thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:26,525 | INFO     | all data control threads have been joined
[2025-07-27 11:13:55] 2025-07-27 09:13:26,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 11:13:55] 2025-07-27 09:13:26,594 | INFO     | all payload control threads have been joined
[2025-07-27 11:13:55] 2025-07-27 09:13:26,629 | INFO     | [payload] validate_post thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:26,753 | INFO     | all job control threads have been joined
[2025-07-27 11:13:55] 2025-07-27 09:13:26,943 | INFO     | [payload] failed_post thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:27,318 | INFO     | [data] copytool_in thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:27,531 | INFO     | [data] control thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:27,600 | INFO     | [payload] control thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:27,600 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:27,679 | INFO     | [job] validate thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:27,724 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:27,759 | INFO     | [job] control thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:27,788 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:28,535 | INFO     | [data] copytool_out thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:29,456 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:35,973 | INFO     | job.realtimelogging is not enabled
[2025-07-27 11:13:55] 2025-07-27 09:13:36,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 11:13:55] 2025-07-27 09:13:37,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220418324288)>', '<ExcThread(monitor, started 140219324028672)>']
[2025-07-27 11:13:55] 2025-07-27 09:13:42,105 | INFO     | all workflow threads have been joined
[2025-07-27 11:13:55] 2025-07-27 09:13:42,106 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 11:13:55] 2025-07-27 09:13:42,106 | INFO     | traces error code: 0
[2025-07-27 11:13:55] 2025-07-27 09:13:42,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 11:13:55] 2025-07-27 09:13:55,517 | INFO     | PID=3985957 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 11:13:55] 2025-07-27 09:13:55,518 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 11:13:55] 2025-07-27 09:13:55,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 11:13:55] 2025-07-27 09:13:55,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 11:13:55] 2025-07-27 09:13:55,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 11:13:55] 2025-07-27 09:13:55,518 | INFO     | [monitor] control thread has ended
[2025-07-27 11:13:55] 2025-07-27 09:13:55,563 [wrapper] ==== pilot stdout END ====
[2025-07-27 11:13:55] 2025-07-27 09:13:55,565 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 11:13:55] 2025-07-27 09:13:55,568 [wrapper] pilotpid: 3985957
[2025-07-27 11:13:55] 2025-07-27 09:13:55,570 [wrapper] Pilot exit status: 0
[2025-07-27 11:13:55] 2025-07-27 09:13:55,577 [wrapper] pandaids: 6745230289
[2025-07-27 11:13:55] 2025-07-27 09:13:55,594 [wrapper] cleanup supervisor_pilot 4002258 3985958
[2025-07-27 11:13:55] 2025-07-27 09:13:55,596 [wrapper] Test setup, not cleaning
[2025-07-27 11:13:55] 2025-07-27 09:13:55,599 [wrapper] apfmon messages muted
[2025-07-27 11:13:55] 2025-07-27 09:13:55,601 [wrapper] ==== wrapper stdout END ====
[2025-07-27 11:13:55] 2025-07-27 09:13:55,603 [wrapper] ==== wrapper stderr END ====
[2025-07-27 11:13:55]  *** Error codes and diagnostics ***
[2025-07-27 11:13:55]     "exeErrorCode": 0,
[2025-07-27 11:13:55]     "exeErrorDiag": "",
[2025-07-27 11:13:55]     "pilotErrorCode": 0,
[2025-07-27 11:13:55]     "pilotErrorDiag": "",
[2025-07-27 11:13:55]  *** Listing of results directory ***
[2025-07-27 11:13:55] total 354796
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc    530466 Jul 26 17:29 pilot3.tar.gz
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc      5112 Jul 26 17:31 queuedata.json
[2025-07-27 11:13:55] -rwx------ 1 boinc boinc     36292 Jul 26 17:32 runpilot2-wrapper.sh
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc       100 Jul 27 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 11:13:55] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 10:00 run_atlas
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc       105 Jul 27 10:00 job.xml
[2025-07-27 11:13:55] -rw-r--r-- 2 boinc boinc 149112665 Jul 27 10:00 EVNT.45743347._002292.pool.root.1
[2025-07-27 11:13:55] -rw-r--r-- 2 boinc boinc    542890 Jul 27 10:00 input.tar.gz
[2025-07-27 11:13:55] -rw-r--r-- 2 boinc boinc     15095 Jul 27 10:00 start_atlas.sh
[2025-07-27 11:13:55] drwxrwx--x 2 boinc boinc      4096 Jul 27 10:00 shared
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc         0 Jul 27 10:00 boinc_setup_complete
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc      6524 Jul 27 10:00 init_data.xml
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc         0 Jul 27 10:00 boinc_lockfile
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc      2563 Jul 27 10:00 pandaJob.out
[2025-07-27 11:13:55] -rw------- 1 boinc boinc    980125 Jul 27 10:00 agis_schedconf.cvmfs.json
[2025-07-27 11:13:55] -rw------- 1 boinc boinc   1593052 Jul 27 10:00 agis_ddmendpoints.agis.ALL.json
[2025-07-27 11:13:55] drwx------ 4 boinc boinc      4096 Jul 27 10:00 pilot3
[2025-07-27 11:13:55] -rw------- 1 boinc boinc 208968435 Jul 27 11:12 HITS.45743349._040186.pool.root.1
[2025-07-27 11:13:55] -rw------- 1 boinc boinc        95 Jul 27 11:13 pilot_heartbeat.json
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc       529 Jul 27 11:13 boinc_task_state.xml
[2025-07-27 11:13:55] -rw------- 1 boinc boinc      1018 Jul 27 11:13 memory_monitor_summary.json
[2025-07-27 11:13:55] -rw------- 1 boinc boinc    241940 Jul 27 11:13 log.45743349._040186.job.log.tgz.1
[2025-07-27 11:13:55] -rw------- 1 boinc boinc      7743 Jul 27 11:13 heartbeat.json
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc        27 Jul 27 11:13 wrapper_checkpoint.txt
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc      8192 Jul 27 11:13 boinc_mmap_file
[2025-07-27 11:13:55] -rw------- 1 boinc boinc       747 Jul 27 11:13 pilotlog.txt
[2025-07-27 11:13:55] -rw------- 1 boinc boinc    431952 Jul 27 11:13 log.45743349._040186.job.log.1
[2025-07-27 11:13:55] -rw------- 1 boinc boinc       357 Jul 27 11:13 output.list
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc       620 Jul 27 11:13 runtime_log
[2025-07-27 11:13:55] -rw------- 1 boinc boinc    696320 Jul 27 11:13 result.tar.gz
[2025-07-27 11:13:55] -rw------- 1 boinc boinc       658 Jul 27 11:13 tWwKDmm3vz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm900KDmhHSB2m.diag
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc      8734 Jul 27 11:13 runtime_log.err
[2025-07-27 11:13:55] -rw-r--r-- 1 boinc boinc     21646 Jul 27 11:13 stderr.txt
[2025-07-27 11:13:55] HITS file was successfully produced:
[2025-07-27 11:13:55] -rw------- 1 boinc boinc 208968435 Jul 27 11:12 shared/HITS.pool.root.1
[2025-07-27 11:13:55]  *** Contents of shared directory: ***
[2025-07-27 11:13:55] total 350928
[2025-07-27 11:13:55] -rw-r--r-- 2 boinc boinc 149112665 Jul 27 10:00 ATLAS.root_0
[2025-07-27 11:13:55] -rw-r--r-- 2 boinc boinc    542890 Jul 27 10:00 input.tar.gz
[2025-07-27 11:13:55] -rw-r--r-- 2 boinc boinc     15095 Jul 27 10:00 start_atlas.sh
[2025-07-27 11:13:55] -rw------- 1 boinc boinc 208968435 Jul 27 11:12 HITS.pool.root.1
[2025-07-27 11:13:55] -rw------- 1 boinc boinc    696320 Jul 27 11:13 result.tar.gz
11:13:57 (3982244): run_atlas exited; CPU time 16312.194048
11:13:57 (3982244): called boinc_finish(0)

</stderr_txt>
]]>

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