Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:42:45 (2869793): wrapper (7.7.26015): starting
10:42:45 (2869793): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 10:42:45] Arguments: --nthreads 3
[2025-07-27 10:42:45] Threads: 3
[2025-07-27 10:42:45] Checking for CVMFS
[2025-07-27 10:42:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 10:42:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 10:42:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 10:42:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 10:42:45] 2.9.2.0 1783837 3893 82220 148805 3 57 19533211 36864000 0 130560 0 2891412 99.990 138170 1591 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 10:42:45] CVMFS is ok
[2025-07-27 10:42:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 10:42:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 10:42:45] Further information can be found at the LHC@home message board.
[2025-07-27 10:42:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 10:42:45] Checking for apptainer binary...
[2025-07-27 10:42:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 10:42:45] Running /usr/bin/apptainer --version
[2025-07-27 10:42:45] apptainer version 1.3.6-6.1
[2025-07-27 10:42:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 10:42:45] atlasA223
[2025-07-27 10:42:45] apptainer works
[2025-07-27 10:42:45] Set ATHENA_PROC_NUMBER=3
[2025-07-27 10:42:45] Set ATHENA_CORE_NUMBER=3
[2025-07-27 10:42:45] Starting ATLAS job with PandaID=6745230080
[2025-07-27 10:42:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:17:03]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:17:03]  lfn=log.45743349._039987.job.log.tgz.1
[2025-07-27 12:17:03]  mtime=0
[2025-07-27 12:17:03]  protocol_id=None
[2025-07-27 12:17:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 12:17:03]  replicas=None
[2025-07-27 12:17:03]  scope=mc23_13p6TeV
[2025-07-27 12:17:03]  status=None
[2025-07-27 12:17:03]  status_code=0
[2025-07-27 12:17:03]  storage_token=
[2025-07-27 12:17:03]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745230080/log.45743349._039987.job.log.tgz.1
[2025-07-27 12:17:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/88/log.45743349._039987.job.log.tgz.1
[2025-07-27 12:17:03]  workdir=None
[2025-07-27 12:17:03] ]
[2025-07-27 12:17:03] 2025-07-27 10:16:26,271 | INFO     | transferring file log.45743349._039987.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745230080/log.45743349._039987.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 12:17:03] 2025-07-27 10:16:26,271 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745230080/log.45743349._039987.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0399
[2025-07-27 12:17:03] 2025-07-27 10:16:26,285 | INFO     | adding to output.list: log.45743349._039987.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/88/log.45743349._039987.job.log.tg
[2025-07-27 12:17:03] 2025-07-27 10:16:26,286 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 12:17:03] 2025-07-27 10:16:26,286 | INFO     | summary of transferred files:
[2025-07-27 12:17:03] 2025-07-27 10:16:26,286 | INFO     |  -- lfn=log.45743349._039987.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 12:17:03] 2025-07-27 10:16:26,286 | INFO     | stage-out finished correctly
[2025-07-27 12:17:03] 2025-07-27 10:16:27,132 | INFO     | PID=2873446 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 12:17:03] 2025-07-27 10:16:28,560 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 12:17:03] 2025-07-27 10:16:28,887 | INFO     | job 6745230080 has state=finished
[2025-07-27 12:17:03] 2025-07-27 10:16:28,887 | INFO     | preparing for final server update for job 6745230080 in state='finished'
[2025-07-27 12:17:03] 2025-07-27 10:16:28,888 | INFO     | this job has now completed (state=finished)
[2025-07-27 12:17:03] 2025-07-27 10:16:28,888 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 12:17:03] 2025-07-27 10:16:28,888 | INFO     | log transfer has been attempted: DONE
[2025-07-27 12:17:03] 2025-07-27 10:16:28,888 | INFO     | job 6745230080 has finished - writing final server update
[2025-07-27 12:17:03] 2025-07-27 10:16:28,888 | INFO     | total number of processed events: 400 (read)
[2025-07-27 12:17:03] 2025-07-27 10:16:28,889 | INFO     | executing command: lscpu
[2025-07-27 12:17:03] 2025-07-27 10:16:28,906 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 12:17:03] 2025-07-27 10:16:30,947 | WARNING  | process 2879942 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 12:17:03] 2025-07-27 10:16:30,947 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745230080/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:17:03] 2025-07-27 10:16:31,003 | INFO     | number of running child processes to parent process 2879942: 1
[2025-07-27 12:17:03] 2025-07-27 10:16:31,003 | INFO     | maximum number of monitored processes: 6
[2025-07-27 12:17:03] 2025-07-27 10:16:31,376 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 12:17:03] 2025-07-27 10:16:31,377 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3551.778416666666
[2025-07-27 12:17:03] 2025-07-27 10:16:31,378 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745230080/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:17:03] 2025-07-27 10:16:31,378 | INFO     | extracted standard info from prmon json
[2025-07-27 12:17:03] 2025-07-27 10:16:31,378 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:17:03] 2025-07-27 10:16:31,378 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:17:03] 2025-07-27 10:16:31,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:17:03] 2025-07-27 10:16:31,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:17:03] 2025-07-27 10:16:31,379 | INFO     | fitting pss+swap vs Time
[2025-07-27 12:17:03] 2025-07-27 10:16:31,379 | INFO     | sum of square deviations: 190403570.0
[2025-07-27 12:17:03] 2025-07-27 10:16:31,379 | INFO     | sum of deviations: -12427331566.999996
[2025-07-27 12:17:03] 2025-07-27 10:16:31,379 | INFO     | mean x: 1753608659.0
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | mean y: 2447276.4588235295
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | -- intersect: 114457634456.80019
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | intersect: 114457634456.80019
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | chi2: 0.09280005890408656
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | -- intersect: 114457634456.80019
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | current memory leak: -65.27 B/s (using 85 data points, chi2=0.09)
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | could have reported an average CPU frequency of 3765 MHz (7 samples)
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | ..............................
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | . Timing measurements:
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | . get job = 0 s
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | . initial setup = 1 s
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | . payload setup = 3 s
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | . stage-in = 0 s
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | . payload execution = 5594 s
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | . stage-out = 0 s
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | . log creation = 0 s
[2025-07-27 12:17:03] 2025-07-27 10:16:31,380 | INFO     | ..............................
[2025-07-27 12:17:03] 2025-07-27 10:16:31,411 | INFO     | 
[2025-07-27 12:17:03] 2025-07-27 10:16:31,411 | INFO     | job summary report
[2025-07-27 12:17:03] 2025-07-27 10:16:31,411 | INFO     | --------------------------------------------------
[2025-07-27 12:17:03] 2025-07-27 10:16:31,411 | INFO     | PanDA job id: 6745230080
[2025-07-27 12:17:03] 2025-07-27 10:16:31,411 | INFO     | task id: 45743349
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | errors: (none)
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | pilot state: finished 
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | transexitcode: 0
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | exeerrorcode: 0
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | exeerrordiag: 
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | exitcode: 0
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | exitmsg: OK
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | cpuconsumptiontime: 16124 s
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | nevents: 400
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | neventsw: 0
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | pid: 2879942
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | pgrp: 2879942
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | corecount: 3
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | event service: False
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | sizes: {0: 2397478, 3: 2397740, 11: 2397768, 5601: 2424548, 5602: 2433552, 5604: 2433608, 5607: 2433930}
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | --------------------------------------------------
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | 
[2025-07-27 12:17:03] 2025-07-27 10:16:31,412 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 12:17:03] 2025-07-27 10:16:31,425 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,425 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | job 6745230080 has completed (purged errors)
[2025-07-27 12:17:03] 2025-07-27 10:16:31,426 | INFO     | overall cleanup function is called
[2025-07-27 12:17:03] 2025-07-27 10:16:32,433 | INFO     | --- collectZombieJob: --- 10, [2879942]
[2025-07-27 12:17:03] 2025-07-27 10:16:32,433 | INFO     | zombie collector waiting for pid 2879942
[2025-07-27 12:17:03] 2025-07-27 10:16:32,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:17:03] 2025-07-27 10:16:32,433 | INFO     | collected zombie processes
[2025-07-27 12:17:03] 2025-07-27 10:16:32,433 | INFO     | will attempt to kill all subprocesses of pid=2879942
[2025-07-27 12:17:03] 2025-07-27 10:16:32,473 | INFO     | process IDs to be killed: [2879942] (in reverse order)
[2025-07-27 12:17:03] 2025-07-27 10:16:32,498 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:17:03] 2025-07-27 10:16:32,498 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:17:03] 2025-07-27 10:16:32,499 | INFO     | did not find any defunct processes belonging to 2879942
[2025-07-27 12:17:03] 2025-07-27 10:16:32,500 | INFO     | did not find any defunct processes belonging to 2879942
[2025-07-27 12:17:03] 2025-07-27 10:16:32,500 | INFO     | ready for new job
[2025-07-27 12:17:03] 2025-07-27 10:16:32,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:17:03] 2025-07-27 10:16:32,501 | INFO     | ***************************************
[2025-07-27 12:17:03] 2025-07-27 10:16:32,501 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:17:03] 2025-07-27 10:16:32,501 | INFO     | ***************************************
[2025-07-27 12:17:03] 2025-07-27 10:16:32,501 | INFO     | 
[2025-07-27 12:17:03] 2025-07-27 10:16:32,502 | INFO     | architecture information:
[2025-07-27 12:17:03] 2025-07-27 10:16:32,502 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:17:03] 2025-07-27 10:16:32,512 | INFO     | cat /etc/os-release:
[2025-07-27 12:17:03] NAME="CentOS Linux"
[2025-07-27 12:17:03] VERSION="7 (Core)"
[2025-07-27 12:17:03] ID="centos"
[2025-07-27 12:17:03] ID_LIKE="rhel fedora"
[2025-07-27 12:17:03] VERSION_ID="7"
[2025-07-27 12:17:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:17:03] ANSI_COLOR="0;31"
[2025-07-27 12:17:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:17:03] HOME_URL="https://www.centos.org/"
[2025-07-27 12:17:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:17:03] 
[2025-07-27 12:17:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:17:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:17:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:17:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:17:03] 
[2025-07-27 12:17:03] 2025-07-27 10:16:32,512 | INFO     | ***************************************
[2025-07-27 12:17:03] 2025-07-27 10:16:33,015 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 12:17:03] 2025-07-27 10:16:33,029 | INFO     | sufficient remaining disk space (381280059392 B)
[2025-07-27 12:17:03] 2025-07-27 10:16:33,029 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:17:03] 2025-07-27 10:16:33,029 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:17:03] 2025-07-27 10:16:33,029 | INFO     | update_server=False
[2025-07-27 12:17:03] 2025-07-27 10:16:33,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:17:03] 2025-07-27 10:16:33,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:17:03] 2025-07-27 10:16:33,211 | INFO     | all job control threads have been joined
[2025-07-27 12:17:03] 2025-07-27 10:16:33,238 | INFO     | all payload control threads have been joined
[2025-07-27 12:17:03] 2025-07-27 10:16:33,507 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 12:17:03] 2025-07-27 10:16:33,507 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 12:17:03] 2025-07-27 10:16:33,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:17:03] 2025-07-27 10:16:33,507 | INFO     | will abort loop
[2025-07-27 12:17:03] 2025-07-27 10:16:33,511 | INFO     | all data control threads have been joined
[2025-07-27 12:17:03] 2025-07-27 10:16:34,035 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:34,035 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:34,216 | INFO     | [job] control thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:34,244 | INFO     | [payload] control thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:34,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:17:03] 2025-07-27 10:16:34,359 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:34,513 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:34,516 | INFO     | [data] control thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:34,599 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:17:03] 2025-07-27 10:16:34,863 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:34,888 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:35,232 | INFO     | [job] validate thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:35,306 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:35,371 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:35,629 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:36,337 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:38,606 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:43,831 | INFO     | job.realtimelogging is not enabled
[2025-07-27 12:17:03] 2025-07-27 10:16:44,836 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:17:03] 2025-07-27 10:16:45,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139973799184192)>', '<ExcThread(monitor, started 139973168715520)>']
[2025-07-27 12:17:03] 2025-07-27 10:16:50,936 | INFO     | all workflow threads have been joined
[2025-07-27 12:17:03] 2025-07-27 10:16:50,937 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:17:03] 2025-07-27 10:16:50,937 | INFO     | traces error code: 0
[2025-07-27 12:17:03] 2025-07-27 10:16:50,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:17:03] 2025-07-27 10:17:03,275 | INFO     | PID=2873446 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 12:17:03] 2025-07-27 10:17:03,275 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:17:03] 2025-07-27 10:17:03,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:17:03] 2025-07-27 10:17:03,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:17:03] 2025-07-27 10:17:03,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:17:03] 2025-07-27 10:17:03,275 | INFO     | [monitor] control thread has ended
[2025-07-27 12:17:03] 2025-07-27 10:17:03,322 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:17:03] 2025-07-27 10:17:03,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:17:03] 2025-07-27 10:17:03,328 [wrapper] pilotpid: 2873446
[2025-07-27 12:17:03] 2025-07-27 10:17:03,330 [wrapper] Pilot exit status: 0
[2025-07-27 12:17:03] 2025-07-27 10:17:03,339 [wrapper] pandaids: 6745230080
[2025-07-27 12:17:03] 2025-07-27 10:17:03,355 [wrapper] cleanup supervisor_pilot 2892424 2873447
[2025-07-27 12:17:03] 2025-07-27 10:17:03,358 [wrapper] Test setup, not cleaning
[2025-07-27 12:17:03] 2025-07-27 10:17:03,360 [wrapper] apfmon messages muted
[2025-07-27 12:17:03] 2025-07-27 10:17:03,363 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:17:03] 2025-07-27 10:17:03,365 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:17:03]  *** Error codes and diagnostics ***
[2025-07-27 12:17:03]     "exeErrorCode": 0,
[2025-07-27 12:17:03]     "exeErrorDiag": "",
[2025-07-27 12:17:03]     "pilotErrorCode": 0,
[2025-07-27 12:17:03]     "pilotErrorDiag": "",
[2025-07-27 12:17:03]  *** Listing of results directory ***
[2025-07-27 12:17:03] total 343728
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc    530466 Jul 26 16:40 pilot3.tar.gz
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc      5112 Jul 26 17:10 queuedata.json
[2025-07-27 12:17:03] -rwx------ 1 boinc boinc     36292 Jul 26 17:11 runpilot2-wrapper.sh
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc       100 Jul 27 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:17:03] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 10:42 run_atlas
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc       105 Jul 27 10:42 job.xml
[2025-07-27 12:17:03] -rw-r--r-- 2 boinc boinc 144096395 Jul 27 10:42 EVNT.45743347._002279.pool.root.1
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc      6931 Jul 27 10:42 init_data.xml
[2025-07-27 12:17:03] drwxrwx--x 2 boinc boinc      4096 Jul 27 10:42 shared
[2025-07-27 12:17:03] -rw-r--r-- 2 boinc boinc    542903 Jul 27 10:42 input.tar.gz
[2025-07-27 12:17:03] -rw-r--r-- 2 boinc boinc     15095 Jul 27 10:42 start_atlas.sh
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc         0 Jul 27 10:42 boinc_lockfile
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc      2563 Jul 27 10:42 pandaJob.out
[2025-07-27 12:17:03] -rw------- 1 boinc boinc    980109 Jul 27 10:42 agis_schedconf.cvmfs.json
[2025-07-27 12:17:03] -rw------- 1 boinc boinc   1593052 Jul 27 10:42 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:17:03] drwx------ 4 boinc boinc      4096 Jul 27 10:42 pilot3
[2025-07-27 12:17:03] -rw------- 1 boinc boinc 202446513 Jul 27 12:16 HITS.45743349._039987.pool.root.1
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc       529 Jul 27 12:16 boinc_task_state.xml
[2025-07-27 12:17:03] -rw------- 1 boinc boinc        95 Jul 27 12:16 pilot_heartbeat.json
[2025-07-27 12:17:03] -rw------- 1 boinc boinc      1017 Jul 27 12:16 memory_monitor_summary.json
[2025-07-27 12:17:03] -rw------- 1 boinc boinc    236045 Jul 27 12:16 log.45743349._039987.job.log.tgz.1
[2025-07-27 12:17:03] -rw------- 1 boinc boinc      7755 Jul 27 12:16 heartbeat.json
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc      8192 Jul 27 12:16 boinc_mmap_file
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc        27 Jul 27 12:16 wrapper_checkpoint.txt
[2025-07-27 12:17:03] -rw------- 1 boinc boinc       747 Jul 27 12:17 pilotlog.txt
[2025-07-27 12:17:03] -rw------- 1 boinc boinc    542966 Jul 27 12:17 log.45743349._039987.job.log.1
[2025-07-27 12:17:03] -rw------- 1 boinc boinc       357 Jul 27 12:17 output.list
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc       620 Jul 27 12:17 runtime_log
[2025-07-27 12:17:03] -rw------- 1 boinc boinc    798720 Jul 27 12:17 result.tar.gz
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc      8749 Jul 27 12:17 runtime_log.err
[2025-07-27 12:17:03] -rw------- 1 boinc boinc       661 Jul 27 12:17 cWOKDmtjvz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMz0KDmiCtxqn.diag
[2025-07-27 12:17:03] -rw-r--r-- 1 boinc boinc     21750 Jul 27 12:17 stderr.txt
[2025-07-27 12:17:03] HITS file was successfully produced:
[2025-07-27 12:17:03] -rw------- 1 boinc boinc 202446513 Jul 27 12:16 shared/HITS.pool.root.1
[2025-07-27 12:17:03]  *** Contents of shared directory: ***
[2025-07-27 12:17:03] total 339760
[2025-07-27 12:17:03] -rw-r--r-- 2 boinc boinc 144096395 Jul 27 10:42 ATLAS.root_0
[2025-07-27 12:17:03] -rw-r--r-- 2 boinc boinc    542903 Jul 27 10:42 input.tar.gz
[2025-07-27 12:17:03] -rw-r--r-- 2 boinc boinc     15095 Jul 27 10:42 start_atlas.sh
[2025-07-27 12:17:03] -rw------- 1 boinc boinc 202446513 Jul 27 12:16 HITS.pool.root.1
[2025-07-27 12:17:03] -rw------- 1 boinc boinc    798720 Jul 27 12:17 result.tar.gz
12:17:04 (2869793): run_atlas exited; CPU time 16139.951754
12:17:04 (2869793): called boinc_finish(0)

</stderr_txt>
]]>

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