Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:44:56 (1482771): wrapper (7.7.26015): starting
16:44:56 (1482771): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 16:44:56] Arguments: --nthreads 8
[2025-07-26 16:44:56] Threads: 8
[2025-07-26 16:44:56] Checking for CVMFS
[2025-07-26 16:44:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 16:44:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 16:44:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 16:44:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 16:44:56] 2.12.6.0 83837 26324 290792 148788 0 201 24283891 32935937 27542 16776704 1 224809193 99.538 289174621 19494 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 16:44:56] CVMFS is ok
[2025-07-26 16:44:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 16:44:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 16:44:56] Further information can be found at the LHC@home message board.
[2025-07-26 16:44:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 16:44:56] Checking for apptainer binary...
[2025-07-26 16:44:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 16:44:56] Running /usr/bin/apptainer --version
[2025-07-26 16:44:56] apptainer version 1.4.1-1.el9
[2025-07-26 16:44:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 16:44:57] c7-2-10.aglt2.org
[2025-07-26 16:44:57] apptainer works
[2025-07-26 16:44:57] Set ATHENA_PROC_NUMBER=8
[2025-07-26 16:44:57] Set ATHENA_CORE_NUMBER=8
[2025-07-26 16:44:57] Starting ATLAS job with PandaID=6745230172
[2025-07-26 16:44:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 18:12:18]  *** The last 200 lines of the pilot log: ***
[2025-07-26 18:12:18]  replicas=None
[2025-07-26 18:12:18]  scope=mc23_13p6TeV
[2025-07-26 18:12:18]  status=None
[2025-07-26 18:12:18]  status_code=0
[2025-07-26 18:12:18]  storage_token=
[2025-07-26 18:12:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745230172/log.45743349._040079.job.log.tgz.1
[2025-07-26 18:12:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/ae/log.45743349._040079.job.log.tgz.1
[2025-07-26 18:12:18]  workdir=None
[2025-07-26 18:12:18] ]
[2025-07-26 18:12:18] 2025-07-26 22:11:32,689 | INFO     | transferring file log.45743349._040079.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745230172/log.45743349._040079.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 18:12:18] 2025-07-26 22:11:32,689 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745230172/log.45743349._040079.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._040079.job
[2025-07-26 18:12:18] 2025-07-26 22:11:32,721 | INFO     | adding to output.list: log.45743349._040079.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/ae/log.45743349._040079.job.log.tg
[2025-07-26 18:12:18] 2025-07-26 22:11:32,722 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 18:12:18] 2025-07-26 22:11:32,722 | INFO     | summary of transferred files:
[2025-07-26 18:12:18] 2025-07-26 22:11:32,722 | INFO     |  -- lfn=log.45743349._040079.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 18:12:18] 2025-07-26 22:11:32,723 | INFO     | stage-out finished correctly
[2025-07-26 18:12:18] 2025-07-26 22:11:34,221 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 18:12:18] 2025-07-26 22:11:37,002 | INFO     | job 6745230172 has state=finished
[2025-07-26 18:12:18] 2025-07-26 22:11:37,003 | INFO     | preparing for final server update for job 6745230172 in state='finished'
[2025-07-26 18:12:18] 2025-07-26 22:11:37,003 | INFO     | this job has now completed (state=finished)
[2025-07-26 18:12:18] 2025-07-26 22:11:37,016 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 18:12:18] 2025-07-26 22:11:37,020 | INFO     | log transfer has been attempted: DONE
[2025-07-26 18:12:18] 2025-07-26 22:11:37,020 | INFO     | job 6745230172 has finished - writing final server update
[2025-07-26 18:12:18] 2025-07-26 22:11:37,021 | INFO     | total number of processed events: 400 (read)
[2025-07-26 18:12:18] 2025-07-26 22:11:37,023 | INFO     | executing command: lscpu
[2025-07-26 18:12:18] 2025-07-26 22:11:37,119 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 18:12:18] 2025-07-26 22:11:37,656 | WARNING  | process 1526727 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 18:12:18] 2025-07-26 22:11:37,657 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745230172/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 18:12:18] 2025-07-26 22:11:39,005 | INFO     | PID=1495388 has CPU usage=18.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 18:12:18] 2025-07-26 22:11:39,006 | INFO     | .. there are 38 such processes running
[2025-07-26 18:12:18] 2025-07-26 22:11:39,011 | INFO     | number of running child processes to parent process 1526727: 1
[2025-07-26 18:12:18] 2025-07-26 22:11:39,012 | INFO     | maximum number of monitored processes: 6
[2025-07-26 18:12:18] 2025-07-26 22:11:41,517 | INFO     | monitor loop #365: job 0:6745230172 is in state 'finished'
[2025-07-26 18:12:18] 2025-07-26 22:11:41,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 18:12:18] 2025-07-26 22:11:44,020 | INFO     | monitor loop #366: job 0:6745230172 is in state 'finished'
[2025-07-26 18:12:18] 2025-07-26 22:11:44,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 18:12:18] 2025-07-26 22:11:44,344 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 18:12:18] 2025-07-26 22:11:44,360 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3146.148885416667
[2025-07-26 18:12:18] 2025-07-26 22:11:44,378 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745230172/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 18:12:18] 2025-07-26 22:11:44,379 | INFO     | extracted standard info from prmon json
[2025-07-26 18:12:18] 2025-07-26 22:11:44,379 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 18:12:18] 2025-07-26 22:11:44,379 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 18:12:18] 2025-07-26 22:11:44,380 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 18:12:18] 2025-07-26 22:11:44,380 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 18:12:18] 2025-07-26 22:11:44,382 | INFO     | fitting pss+swap vs Time
[2025-07-26 18:12:18] 2025-07-26 22:11:44,382 | INFO     | sum of square deviations: 141539398.0
[2025-07-26 18:12:18] 2025-07-26 22:11:44,383 | INFO     | sum of deviations: -14613233504.999998
[2025-07-26 18:12:18] 2025-07-26 22:11:44,383 | INFO     | mean x: 1753565407.0
[2025-07-26 18:12:18] 2025-07-26 22:11:44,383 | INFO     | mean y: 2321849.7922077924
[2025-07-26 18:12:18] 2025-07-26 22:11:44,383 | INFO     | -- intersect: 181049161958.44775
[2025-07-26 18:12:18] 2025-07-26 22:11:44,383 | INFO     | intersect: 181049161958.44775
[2025-07-26 18:12:18] 2025-07-26 22:11:44,383 | INFO     | chi2: 0.19327194443782067
[2025-07-26 18:12:18] 2025-07-26 22:11:44,383 | INFO     | -- intersect: 181049161958.44775
[2025-07-26 18:12:18] 2025-07-26 22:11:44,384 | INFO     | current memory leak: -103.24 B/s (using 77 data points, chi2=0.19)
[2025-07-26 18:12:18] 2025-07-26 22:11:44,384 | INFO     | could have reported an average CPU frequency of 3238 MHz (6 samples)
[2025-07-26 18:12:18] 2025-07-26 22:11:44,384 | INFO     | ..............................
[2025-07-26 18:12:18] 2025-07-26 22:11:44,384 | INFO     | . Timing measurements:
[2025-07-26 18:12:18] 2025-07-26 22:11:44,384 | INFO     | . get job = 0 s
[2025-07-26 18:12:18] 2025-07-26 22:11:44,385 | INFO     | . initial setup = 3 s
[2025-07-26 18:12:18] 2025-07-26 22:11:44,385 | INFO     | . payload setup = 17 s
[2025-07-26 18:12:18] 2025-07-26 22:11:44,385 | INFO     | . stage-in = 0 s
[2025-07-26 18:12:18] 2025-07-26 22:11:44,385 | INFO     | . payload execution = 5118 s
[2025-07-26 18:12:18] 2025-07-26 22:11:44,385 | INFO     | . stage-out = 0 s
[2025-07-26 18:12:18] 2025-07-26 22:11:44,385 | INFO     | . log creation = 0 s
[2025-07-26 18:12:18] 2025-07-26 22:11:44,385 | INFO     | ..............................
[2025-07-26 18:12:18] 2025-07-26 22:11:44,701 | INFO     | 
[2025-07-26 18:12:18] 2025-07-26 22:11:44,702 | INFO     | job summary report
[2025-07-26 18:12:18] 2025-07-26 22:11:44,702 | INFO     | --------------------------------------------------
[2025-07-26 18:12:18] 2025-07-26 22:11:44,702 | INFO     | PanDA job id: 6745230172
[2025-07-26 18:12:18] 2025-07-26 22:11:44,702 | INFO     | task id: 45743349
[2025-07-26 18:12:18] 2025-07-26 22:11:44,702 | INFO     | errors: (none)
[2025-07-26 18:12:18] 2025-07-26 22:11:44,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 18:12:18] 2025-07-26 22:11:44,702 | INFO     | pilot state: finished 
[2025-07-26 18:12:18] 2025-07-26 22:11:44,702 | INFO     | transexitcode: 0
[2025-07-26 18:12:18] 2025-07-26 22:11:44,702 | INFO     | exeerrorcode: 0
[2025-07-26 18:12:18] 2025-07-26 22:11:44,702 | INFO     | exeerrordiag: 
[2025-07-26 18:12:18] 2025-07-26 22:11:44,702 | INFO     | exitcode: 0
[2025-07-26 18:12:18] 2025-07-26 22:11:44,703 | INFO     | exitmsg: OK
[2025-07-26 18:12:18] 2025-07-26 22:11:44,703 | INFO     | cpuconsumptiontime: 35814 s
[2025-07-26 18:12:18] 2025-07-26 22:11:44,703 | INFO     | nevents: 400
[2025-07-26 18:12:18] 2025-07-26 22:11:44,703 | INFO     | neventsw: 0
[2025-07-26 18:12:18] 2025-07-26 22:11:44,705 | INFO     | pid: 1526727
[2025-07-26 18:12:18] 2025-07-26 22:11:44,705 | INFO     | pgrp: 1526727
[2025-07-26 18:12:18] 2025-07-26 22:11:44,705 | INFO     | corecount: 8
[2025-07-26 18:12:18] 2025-07-26 22:11:44,706 | INFO     | event service: False
[2025-07-26 18:12:18] 2025-07-26 22:11:44,706 | INFO     | sizes: {0: 2397304, 1: 2397503, 11: 2397503, 12: 2397793, 22: 2397821, 5137: 2424409, 5138: 2433407, 5139: 2433463, 5149: 2433657}
[2025-07-26 18:12:18] 2025-07-26 22:11:44,706 | INFO     | --------------------------------------------------
[2025-07-26 18:12:18] 2025-07-26 22:11:44,706 | INFO     | 
[2025-07-26 18:12:18] 2025-07-26 22:11:44,706 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 18:12:18] 2025-07-26 22:11:44,748 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,748 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,748 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,748 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,748 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,748 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,748 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,748 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,748 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,748 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,749 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,749 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,749 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,749 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,749 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,749 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,749 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 18:12:18] 2025-07-26 22:11:44,749 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,749 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 18:12:18] 2025-07-26 22:11:44,749 | INFO     | job 6745230172 has completed (purged errors)
[2025-07-26 18:12:18] 2025-07-26 22:11:44,749 | INFO     | overall cleanup function is called
[2025-07-26 18:12:18] 2025-07-26 22:11:45,758 | INFO     | --- collectZombieJob: --- 10, [1526727]
[2025-07-26 18:12:18] 2025-07-26 22:11:45,758 | INFO     | zombie collector waiting for pid 1526727
[2025-07-26 18:12:18] 2025-07-26 22:11:45,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 18:12:18] 2025-07-26 22:11:45,759 | INFO     | collected zombie processes
[2025-07-26 18:12:18] 2025-07-26 22:11:45,759 | INFO     | will attempt to kill all subprocesses of pid=1526727
[2025-07-26 18:12:18] 2025-07-26 22:11:46,424 | INFO     | process IDs to be killed: [1526727] (in reverse order)
[2025-07-26 18:12:18] 2025-07-26 22:11:46,668 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 18:12:18] 2025-07-26 22:11:46,668 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 18:12:18] 2025-07-26 22:11:46,704 | INFO     | did not find any defunct processes belonging to 1526727
[2025-07-26 18:12:18] 2025-07-26 22:11:46,734 | INFO     | did not find any defunct processes belonging to 1526727
[2025-07-26 18:12:18] 2025-07-26 22:11:46,735 | INFO     | ready for new job
[2025-07-26 18:12:18] 2025-07-26 22:11:46,735 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 18:12:18] 2025-07-26 22:11:46,737 | INFO     | ***************************************
[2025-07-26 18:12:18] 2025-07-26 22:11:46,737 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 18:12:18] 2025-07-26 22:11:46,737 | INFO     | ***************************************
[2025-07-26 18:12:18] 2025-07-26 22:11:46,737 | INFO     | 
[2025-07-26 18:12:18] 2025-07-26 22:11:46,757 | INFO     | architecture information:
[2025-07-26 18:12:18] 2025-07-26 22:11:46,757 | INFO     | executing command: cat /etc/os-release
[2025-07-26 18:12:18] 2025-07-26 22:11:46,782 | INFO     | cat /etc/os-release:
[2025-07-26 18:12:18] NAME="CentOS Linux"
[2025-07-26 18:12:18] VERSION="7 (Core)"
[2025-07-26 18:12:18] ID="centos"
[2025-07-26 18:12:18] ID_LIKE="rhel fedora"
[2025-07-26 18:12:18] VERSION_ID="7"
[2025-07-26 18:12:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 18:12:18] ANSI_COLOR="0;31"
[2025-07-26 18:12:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 18:12:18] HOME_URL="https://www.centos.org/"
[2025-07-26 18:12:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 18:12:18] 
[2025-07-26 18:12:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 18:12:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 18:12:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 18:12:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 18:12:18] 
[2025-07-26 18:12:18] 2025-07-26 22:11:46,783 | INFO     | ***************************************
[2025-07-26 18:12:18] 2025-07-26 22:11:47,286 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 18:12:18] 2025-07-26 22:11:47,312 | INFO     | sufficient remaining disk space (76054265856 B)
[2025-07-26 18:12:18] 2025-07-26 22:11:47,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 18:12:18] 2025-07-26 22:11:47,313 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 18:12:18] 2025-07-26 22:11:47,313 | INFO     | update_server=False
[2025-07-26 18:12:18] 2025-07-26 22:11:47,313 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 18:12:18] 2025-07-26 22:11:47,531 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:12:18] 2025-07-26 22:11:47,532 | INFO     | aborting loop
[2025-07-26 18:12:18] 2025-07-26 22:11:47,646 | INFO     | all payload control threads have been joined
[2025-07-26 18:12:18] 2025-07-26 22:11:47,728 | INFO     | all data control threads have been joined
[2025-07-26 18:12:18] 2025-07-26 22:11:48,318 | INFO     | [job] retrieve thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:48,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 18:12:18] 2025-07-26 22:11:48,437 | INFO     | [payload] failed_post thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:48,537 | INFO     | [job] job monitor thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:48,652 | INFO     | [payload] control thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:48,669 | INFO     | all job control threads have been joined
[2025-07-26 18:12:18] 2025-07-26 22:11:48,670 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:48,734 | INFO     | [data] control thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:48,933 | INFO     | [payload] validate_post thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:49,246 | INFO     | [job] validate thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:49,341 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:49,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 18:12:18] 2025-07-26 22:11:49,459 | INFO     | [data] copytool_in thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:49,502 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:12:18] 2025-07-26 22:11:49,675 | INFO     | [job] control thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:49,709 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:50,352 | INFO     | [data] copytool_out thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:50,507 | INFO     | [job] queue monitor thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:53,420 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:11:57,595 | INFO     | job.realtimelogging is not enabled
[2025-07-26 18:12:18] 2025-07-26 22:11:58,601 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 18:12:18] 2025-07-26 22:12:00,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139873730750272)>', '<ExcThread(monitor, started 139873210046208)>']
[2025-07-26 18:12:18] 2025-07-26 22:12:05,139 | INFO     | all workflow threads have been joined
[2025-07-26 18:12:18] 2025-07-26 22:12:05,140 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 18:12:18] 2025-07-26 22:12:05,140 | INFO     | traces error code: 0
[2025-07-26 18:12:18] 2025-07-26 22:12:05,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 18:12:18] 2025-07-26 22:12:17,806 | INFO     | PID=1495388 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 18:12:18] 2025-07-26 22:12:17,807 | INFO     | .. there are 38 such processes running
[2025-07-26 18:12:18] 2025-07-26 22:12:17,807 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 18:12:18] 2025-07-26 22:12:17,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 18:12:18] 2025-07-26 22:12:17,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 18:12:18] 2025-07-26 22:12:17,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 18:12:18] 2025-07-26 22:12:17,808 | INFO     | [monitor] control thread has ended
[2025-07-26 18:12:18] 2025-07-26 22:12:18,106 [wrapper] ==== pilot stdout END ====
[2025-07-26 18:12:18] 2025-07-26 22:12:18,112 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 18:12:18] 2025-07-26 22:12:18,117 [wrapper] pilotpid: 1495388
[2025-07-26 18:12:18] 2025-07-26 22:12:18,121 [wrapper] Pilot exit status: 0
[2025-07-26 18:12:18] 2025-07-26 22:12:18,144 [wrapper] pandaids: 6745230172
[2025-07-26 18:12:18] 2025-07-26 22:12:18,306 [wrapper] cleanup supervisor_pilot 2718822 1495392
[2025-07-26 18:12:18] 2025-07-26 22:12:18,312 [wrapper] Test setup, not cleaning
[2025-07-26 18:12:18] 2025-07-26 22:12:18,318 [wrapper] apfmon messages muted
[2025-07-26 18:12:18] 2025-07-26 22:12:18,322 [wrapper] ==== wrapper stdout END ====
[2025-07-26 18:12:18] 2025-07-26 22:12:18,327 [wrapper] ==== wrapper stderr END ====
[2025-07-26 18:12:18]  *** Error codes and diagnostics ***
[2025-07-26 18:12:18]     "exeErrorCode": 0,
[2025-07-26 18:12:18]     "exeErrorDiag": "",
[2025-07-26 18:12:18]     "pilotErrorCode": 0,
[2025-07-26 18:12:18]     "pilotErrorDiag": "",
[2025-07-26 18:12:18]  *** Listing of results directory ***
[2025-07-26 18:12:18] total 347516
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 10:40 pilot3.tar.gz
[2025-07-26 18:12:18] -rwx------. 1 boincer umatlas     36292 Jul 26 11:20 runpilot2-wrapper.sh
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 11:20 queuedata.json
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas       100 Jul 26 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 18:12:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 16:44 run_atlas
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas       105 Jul 26 16:44 job.xml
[2025-07-26 18:12:18] -rw-r--r--. 2 boincer umatlas 146670154 Jul 26 16:44 EVNT.45743347._002285.pool.root.1
[2025-07-26 18:12:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:44 start_atlas.sh
[2025-07-26 18:12:18] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 16:44 shared
[2025-07-26 18:12:18] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 16:44 input.tar.gz
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas         0 Jul 26 16:44 boinc_lockfile
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 16:44 pandaJob.out
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas    980125 Jul 26 16:45 agis_schedconf.cvmfs.json
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas   1593052 Jul 26 16:45 agis_ddmendpoints.agis.ALL.json
[2025-07-26 18:12:18] drwx------. 4 boincer umatlas      4096 Jul 26 16:45 pilot3
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas      6931 Jul 26 18:09 init_data.xml
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas 203689584 Jul 26 18:11 HITS.45743349._040079.pool.root.1
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas       529 Jul 26 18:11 boinc_task_state.xml
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas      1034 Jul 26 18:11 memory_monitor_summary.json
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas    312388 Jul 26 18:11 log.45743349._040079.job.log.tgz.1
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas        95 Jul 26 18:11 pilot_heartbeat.json
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas      7773 Jul 26 18:11 heartbeat.json
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas       823 Jul 26 18:12 pilotlog.txt
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 18:12 boinc_mmap_file
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas    497610 Jul 26 18:12 log.45743349._040079.job.log.1
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas       357 Jul 26 18:12 output.list
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas       620 Jul 26 18:12 runtime_log
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas    829440 Jul 26 18:12 result.tar.gz
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 18:12 runtime_log.err
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas       653 Jul 26 18:12 6GWNDmgsvz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6z0KDmIIWVSm.diag
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas     21990 Jul 26 18:12 stderr.txt
[2025-07-26 18:12:18] -rw-r--r--. 1 boincer umatlas        27 Jul 26 18:12 wrapper_checkpoint.txt
[2025-07-26 18:12:18] HITS file was successfully produced:
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas 203689584 Jul 26 18:11 shared/HITS.pool.root.1
[2025-07-26 18:12:18]  *** Contents of shared directory: ***
[2025-07-26 18:12:18] total 343516
[2025-07-26 18:12:18] -rw-r--r--. 2 boincer umatlas 146670154 Jul 26 16:44 ATLAS.root_0
[2025-07-26 18:12:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:44 start_atlas.sh
[2025-07-26 18:12:18] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 16:44 input.tar.gz
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas 203689584 Jul 26 18:11 HITS.pool.root.1
[2025-07-26 18:12:18] -rw-------. 1 boincer umatlas    829440 Jul 26 18:12 result.tar.gz
18:12:41 (1482771): run_atlas exited; CPU time 36062.848700
18:12:41 (1482771): called boinc_finish(0)

</stderr_txt>
]]>

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