Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:25:47 (1643876): wrapper (7.7.26015): starting
15:25:47 (1643876): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 15:25:47] Arguments: --nthreads 12
[2025-07-27 15:25:47] Threads: 12
[2025-07-27 15:25:47] Checking for CVMFS
[2025-07-27 15:25:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:25:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:25:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:25:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:25:48] 2.13.1.0 50093 7810 74928 148817 2 187 3435337 4096000 1693 130560 0 15664210 99.996 287570 285 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-27 15:25:48] CVMFS is ok
[2025-07-27 15:25:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:25:48] Checking for apptainer binary...
[2025-07-27 15:25:48] apptainer is not installed, using version from CVMFS
[2025-07-27 15:25:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:25:48] ryzen7
[2025-07-27 15:25:48] apptainer works
[2025-07-27 15:25:48] Set ATHENA_PROC_NUMBER=12
[2025-07-27 15:25:48] Set ATHENA_CORE_NUMBER=12
[2025-07-27 15:25:48] Starting ATLAS job with PandaID=6745229986
[2025-07-27 15:25:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:57:34]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:57:34]  is_altstaged=None
[2025-07-27 16:57:34]  is_tar=False
[2025-07-27 16:57:34]  lfn=log.45743349._039894.job.log.tgz.1
[2025-07-27 16:57:34]  mtime=0
[2025-07-27 16:57:34]  protocol_id=None
[2025-07-27 16:57:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 16:57:34]  replicas=None
[2025-07-27 16:57:34]  scope=mc23_13p6TeV
[2025-07-27 16:57:34]  status=None
[2025-07-27 16:57:34]  status_code=0
[2025-07-27 16:57:34]  storage_token=
[2025-07-27 16:57:34]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6745229986/log.45743349._039894.job.log.tgz.1
[2025-07-27 16:57:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/9c/log.45743349._039894.job.log.tgz.1
[2025-07-27 16:57:34]  workdir=None
[2025-07-27 16:57:34] ]
[2025-07-27 16:57:34] 2025-07-27 16:57:17,932 | INFO     | transferring file log.45743349._039894.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6745229986/log.45743349._039894.job.log.tgz.1 t
[2025-07-27 16:57:34] 2025-07-27 16:57:17,932 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6745229986/log.45743349._039894.job.log.tgz.1 /opt/boinc/instance_home
[2025-07-27 16:57:34] 2025-07-27 16:57:17,939 | INFO     | adding to output.list: log.45743349._039894.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/9c/log.45743349._039894.job.log.tg
[2025-07-27 16:57:34] 2025-07-27 16:57:17,940 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:57:34] 2025-07-27 16:57:17,940 | INFO     | summary of transferred files:
[2025-07-27 16:57:34] 2025-07-27 16:57:17,940 | INFO     |  -- lfn=log.45743349._039894.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:57:34] 2025-07-27 16:57:17,940 | INFO     | stage-out finished correctly
[2025-07-27 16:57:34] 2025-07-27 16:57:17,968 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:57:34] 2025-07-27 16:57:18,395 | INFO     | job 6745229986 has state=finished
[2025-07-27 16:57:34] 2025-07-27 16:57:18,395 | INFO     | preparing for final server update for job 6745229986 in state='finished'
[2025-07-27 16:57:34] 2025-07-27 16:57:19,005 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 16:57:34] 2025-07-27 16:57:19,006 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:57:34] 2025-07-27 16:57:19,006 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:57:34] 2025-07-27 16:57:19,006 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:57:34] 2025-07-27 16:57:19,006 | INFO     | job 6745229986 has finished - writing final server update
[2025-07-27 16:57:34] 2025-07-27 16:57:19,006 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:57:34] 2025-07-27 16:57:19,006 | INFO     | executing command: lscpu
[2025-07-27 16:57:34] 2025-07-27 16:57:19,044 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:57:34] 2025-07-27 16:57:19,614 | INFO     | monitor loop #406: job 0:6745229986 is in state 'finished'
[2025-07-27 16:57:34] 2025-07-27 16:57:19,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:57:34] 2025-07-27 16:57:20,534 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 16:57:34] 2025-07-27 16:57:20,536 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3158.8228125
[2025-07-27 16:57:34] 2025-07-27 16:57:20,537 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6745229986/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:57:34] 2025-07-27 16:57:20,537 | INFO     | extracted standard info from prmon json
[2025-07-27 16:57:34] 2025-07-27 16:57:20,537 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:57:34] 2025-07-27 16:57:20,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:57:34] 2025-07-27 16:57:20,537 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:57:34] 2025-07-27 16:57:20,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:57:34] 2025-07-27 16:57:20,538 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:57:34] 2025-07-27 16:57:20,538 | INFO     | sum of square deviations: 177275882.0
[2025-07-27 16:57:34] 2025-07-27 16:57:20,538 | INFO     | sum of deviations: -5838359227.0
[2025-07-27 16:57:34] 2025-07-27 16:57:20,538 | INFO     | mean x: 1753632775.0
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | mean y: 2755911.734939759
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | -- intersect: 57756455835.17329
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | intersect: 57756455835.17329
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | chi2: 0.02108762720969018
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | -- intersect: 57756455835.17329
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | current memory leak: -32.93 B/s (using 83 data points, chi2=0.02)
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | could have reported an average CPU frequency of 3560 MHz (6 samples)
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | ..............................
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | . Timing measurements:
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | . get job = 0 s
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | . initial setup = 1 s
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | . payload setup = 2 s
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | . stage-in = 0 s
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | . payload execution = 5467 s
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | . stage-out = 0 s
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | . log creation = 0 s
[2025-07-27 16:57:34] 2025-07-27 16:57:20,539 | INFO     | ..............................
[2025-07-27 16:57:34] 2025-07-27 16:57:20,707 | INFO     | 
[2025-07-27 16:57:34] 2025-07-27 16:57:20,707 | INFO     | job summary report
[2025-07-27 16:57:34] 2025-07-27 16:57:20,707 | INFO     | --------------------------------------------------
[2025-07-27 16:57:34] 2025-07-27 16:57:20,707 | INFO     | PanDA job id: 6745229986
[2025-07-27 16:57:34] 2025-07-27 16:57:20,707 | INFO     | task id: 45743349
[2025-07-27 16:57:34] 2025-07-27 16:57:20,707 | INFO     | errors: (none)
[2025-07-27 16:57:34] 2025-07-27 16:57:20,707 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:57:34] 2025-07-27 16:57:20,707 | INFO     | pilot state: finished 
[2025-07-27 16:57:34] 2025-07-27 16:57:20,707 | INFO     | transexitcode: 0
[2025-07-27 16:57:34] 2025-07-27 16:57:20,707 | INFO     | exeerrorcode: 0
[2025-07-27 16:57:34] 2025-07-27 16:57:20,707 | INFO     | exeerrordiag: 
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | exitcode: 0
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | exitmsg: OK
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | cpuconsumptiontime: 28397 s
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | nevents: 400
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | neventsw: 0
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | pid: 1654276
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | pgrp: 1654276
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | corecount: 12
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | event service: False
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | sizes: {0: 2397498, 2: 2397760, 11: 2397788, 5473: 2424449, 5474: 2433549, 5476: 2433687}
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | --------------------------------------------------
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | 
[2025-07-27 16:57:34] 2025-07-27 16:57:20,708 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,717 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:57:34] 2025-07-27 16:57:20,718 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,718 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:57:34] 2025-07-27 16:57:20,718 | INFO     | job 6745229986 has completed (purged errors)
[2025-07-27 16:57:34] 2025-07-27 16:57:20,718 | INFO     | overall cleanup function is called
[2025-07-27 16:57:34] 2025-07-27 16:57:21,664 | INFO     | PID=1647612 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:57:34] 2025-07-27 16:57:21,664 | INFO     | .. there are 3 such processes running
[2025-07-27 16:57:34] 2025-07-27 16:57:21,725 | INFO     | --- collectZombieJob: --- 10, [1654276]
[2025-07-27 16:57:34] 2025-07-27 16:57:21,725 | INFO     | zombie collector waiting for pid 1654276
[2025-07-27 16:57:34] 2025-07-27 16:57:21,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:57:34] 2025-07-27 16:57:21,725 | INFO     | collected zombie processes
[2025-07-27 16:57:34] 2025-07-27 16:57:21,725 | INFO     | will attempt to kill all subprocesses of pid=1654276
[2025-07-27 16:57:34] 2025-07-27 16:57:21,784 | INFO     | process IDs to be killed: [1654276] (in reverse order)
[2025-07-27 16:57:34] 2025-07-27 16:57:21,818 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:57:34] 2025-07-27 16:57:21,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:57:34] 2025-07-27 16:57:21,820 | INFO     | did not find any defunct processes belonging to 1654276
[2025-07-27 16:57:34] 2025-07-27 16:57:21,822 | INFO     | did not find any defunct processes belonging to 1654276
[2025-07-27 16:57:34] 2025-07-27 16:57:21,822 | INFO     | ready for new job
[2025-07-27 16:57:34] 2025-07-27 16:57:21,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:57:34] 2025-07-27 16:57:21,823 | INFO     | ***************************************
[2025-07-27 16:57:34] 2025-07-27 16:57:21,823 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:57:34] 2025-07-27 16:57:21,823 | INFO     | ***************************************
[2025-07-27 16:57:34] 2025-07-27 16:57:21,823 | INFO     | 
[2025-07-27 16:57:34] 2025-07-27 16:57:21,843 | INFO     | architecture information:
[2025-07-27 16:57:34] 2025-07-27 16:57:21,843 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:57:34] 2025-07-27 16:57:21,852 | INFO     | cat /etc/os-release:
[2025-07-27 16:57:34] NAME="CentOS Linux"
[2025-07-27 16:57:34] VERSION="7 (Core)"
[2025-07-27 16:57:34] ID="centos"
[2025-07-27 16:57:34] ID_LIKE="rhel fedora"
[2025-07-27 16:57:34] VERSION_ID="7"
[2025-07-27 16:57:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:57:34] ANSI_COLOR="0;31"
[2025-07-27 16:57:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:57:34] HOME_URL="https://www.centos.org/"
[2025-07-27 16:57:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:57:34] 
[2025-07-27 16:57:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:57:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:57:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:57:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:57:34] 
[2025-07-27 16:57:34] 2025-07-27 16:57:21,852 | INFO     | ***************************************
[2025-07-27 16:57:34] 2025-07-27 16:57:22,355 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-07-27 16:57:34] 2025-07-27 16:57:22,364 | INFO     | sufficient remaining disk space (150204317696 B)
[2025-07-27 16:57:34] 2025-07-27 16:57:22,364 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:57:34] 2025-07-27 16:57:22,364 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:57:34] 2025-07-27 16:57:22,364 | INFO     | update_server=False
[2025-07-27 16:57:34] 2025-07-27 16:57:22,364 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:57:34] 2025-07-27 16:57:22,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:57:34] 2025-07-27 16:57:22,365 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 16:57:34] 2025-07-27 16:57:22,365 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:57:34] 2025-07-27 16:57:22,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:57:34] 2025-07-27 16:57:22,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:57:34] 2025-07-27 16:57:22,780 | INFO     | all payload control threads have been joined
[2025-07-27 16:57:34] 2025-07-27 16:57:22,895 | INFO     | all job control threads have been joined
[2025-07-27 16:57:34] 2025-07-27 16:57:23,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:57:34] 2025-07-27 16:57:23,122 | INFO     | aborting loop
[2025-07-27 16:57:34] 2025-07-27 16:57:23,364 | INFO     | all data control threads have been joined
[2025-07-27 16:57:34] 2025-07-27 16:57:23,368 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:23,369 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:23,435 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:23,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:57:34] 2025-07-27 16:57:23,732 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:23,785 | INFO     | [payload] control thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:23,900 | INFO     | [job] control thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:23,958 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:24,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:57:34] 2025-07-27 16:57:24,099 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:24,123 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:24,325 | INFO     | job.realtimelogging is not enabled
[2025-07-27 16:57:34] 2025-07-27 16:57:24,369 | INFO     | [data] control thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:24,596 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:24,808 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:24,842 | INFO     | [job] validate thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:25,330 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:25,478 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:28,018 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:57:34] 2025-07-27 16:57:29,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953977214784)>', '<ExcThread(monitor, started 139953673574144)>']
[2025-07-27 16:57:34] 2025-07-27 16:57:29,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:57:34] 2025-07-27 16:57:29,394 | INFO     | [monitor] control thread has ended
[2025-07-27 16:57:34] 2025-07-27 16:57:34,299 | INFO     | all workflow threads have been joined
[2025-07-27 16:57:34] 2025-07-27 16:57:34,299 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:57:34] 2025-07-27 16:57:34,299 | INFO     | traces error code: 0
[2025-07-27 16:57:34] 2025-07-27 16:57:34,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:57:34] 2025-07-27 16:57:34,338 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:57:34] 2025-07-27 16:57:34,339 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:57:34] 2025-07-27 16:57:34,340 [wrapper] pilotpid: 1647612
[2025-07-27 16:57:34] 2025-07-27 16:57:34,341 [wrapper] Pilot exit status: 0
[2025-07-27 16:57:34] 2025-07-27 16:57:34,345 [wrapper] pandaids: 6745229986
[2025-07-27 16:57:34] 2025-07-27 16:57:34,359 [wrapper] cleanup supervisor_pilot 1676184 1647613
[2025-07-27 16:57:34] 2025-07-27 16:57:34,360 [wrapper] Test setup, not cleaning
[2025-07-27 16:57:34] 2025-07-27 16:57:34,361 [wrapper] apfmon messages muted
[2025-07-27 16:57:34] 2025-07-27 16:57:34,362 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:57:34] 2025-07-27 16:57:34,363 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:57:34]  *** Error codes and diagnostics ***
[2025-07-27 16:57:34]     "exeErrorCode": 0,
[2025-07-27 16:57:34]     "exeErrorDiag": "",
[2025-07-27 16:57:34]     "pilotErrorCode": 0,
[2025-07-27 16:57:34]     "pilotErrorDiag": "",
[2025-07-27 16:57:34]  *** Listing of results directory ***
[2025-07-27 16:57:34] total 358184
[2025-07-27 16:57:34] -rw-r--r-- 1 boinc boinc    530466 Jul 26 14:40 pilot3.tar.gz
[2025-07-27 16:57:34] -rwx------ 1 boinc boinc     36292 Jul 26 15:07 runpilot2-wrapper.sh
[2025-07-27 16:57:34] -rw-r--r-- 1 boinc boinc      5112 Jul 26 15:07 queuedata.json
[2025-07-27 16:57:34] -rw-rw-r-- 1 boinc boinc       100 Jul 27 15:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:57:34] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 15:25 run_atlas
[2025-07-27 16:57:34] -rw-rw-r-- 1 boinc boinc       105 Jul 27 15:25 job.xml
[2025-07-27 16:57:34] -rw-r--r-- 2 boinc boinc 148729143 Jul 27 15:25 EVNT.45743347._002273.pool.root.1
[2025-07-27 16:57:34] -rw-r--r-- 2 boinc boinc     15095 Jul 27 15:25 start_atlas.sh
[2025-07-27 16:57:34] drwxrwx--x 2 boinc boinc      4096 Jul 27 15:25 shared
[2025-07-27 16:57:34] -rw-r--r-- 2 boinc boinc    542885 Jul 27 15:25 input.tar.gz
[2025-07-27 16:57:34] -rw-rw-r-- 1 boinc boinc      9702 Jul 27 15:25 init_data.xml
[2025-07-27 16:57:34] -rw-rw-r-- 1 boinc boinc         0 Jul 27 15:25 boinc_lockfile
[2025-07-27 16:57:34] -rw-rw-r-- 1 boinc boinc      2563 Jul 27 15:25 pandaJob.out
[2025-07-27 16:57:34] -rw------- 1 boinc boinc    980101 Jul 27 15:25 agis_schedconf.cvmfs.json
[2025-07-27 16:57:34] -rw------- 1 boinc boinc   1593052 Jul 27 15:25 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:57:34] drwx------ 4 boinc boinc      4096 Jul 27 15:25 pilot3
[2025-07-27 16:57:34] -rw------- 1 boinc boinc 212322589 Jul 27 16:56 HITS.45743349._039894.pool.root.1
[2025-07-27 16:57:34] -rw------- 1 boinc boinc        95 Jul 27 16:57 pilot_heartbeat.json
[2025-07-27 16:57:34] -rw------- 1 boinc boinc      1021 Jul 27 16:57 memory_monitor_summary.json
[2025-07-27 16:57:34] -rw------- 1 boinc boinc    370173 Jul 27 16:57 log.45743349._039894.job.log.tgz.1
[2025-07-27 16:57:34] -rw------- 1 boinc boinc      7739 Jul 27 16:57 heartbeat.json
[2025-07-27 16:57:34] -rw-rw-r-- 1 boinc boinc       530 Jul 27 16:57 boinc_task_state.xml
[2025-07-27 16:57:34] -rw-rw-r-- 1 boinc boinc        27 Jul 27 16:57 wrapper_checkpoint.txt
[2025-07-27 16:57:34] -rw-rw-r-- 1 boinc boinc      8192 Jul 27 16:57 boinc_mmap_file
[2025-07-27 16:57:34] -rw------- 1 boinc boinc      4576 Jul 27 16:57 pilotlog.txt
[2025-07-27 16:57:34] -rw------- 1 boinc boinc    551161 Jul 27 16:57 log.45743349._039894.job.log.1
[2025-07-27 16:57:34] -rw-rw-r-- 1 boinc boinc       620 Jul 27 16:57 runtime_log
[2025-07-27 16:57:34] -rw------- 1 boinc boinc       357 Jul 27 16:57 output.list
[2025-07-27 16:57:34] -rw------- 1 boinc boinc    942080 Jul 27 16:57 result.tar.gz
[2025-07-27 16:57:34] -rw------- 1 boinc boinc       648 Jul 27 16:57 tZuLDmyfvz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9PSLDmJ3fkrm.diag
[2025-07-27 16:57:34] -rw-rw-r-- 1 boinc boinc      8954 Jul 27 16:57 runtime_log.err
[2025-07-27 16:57:34] -rw-rw-r-- 1 boinc boinc     21270 Jul 27 16:57 stderr.txt
[2025-07-27 16:57:34] HITS file was successfully produced:
[2025-07-27 16:57:34] -rw------- 1 boinc boinc 212322589 Jul 27 16:56 shared/HITS.pool.root.1
[2025-07-27 16:57:34]  *** Contents of shared directory: ***
[2025-07-27 16:57:34] total 354068
[2025-07-27 16:57:34] -rw-r--r-- 2 boinc boinc 148729143 Jul 27 15:25 ATLAS.root_0
[2025-07-27 16:57:34] -rw-r--r-- 2 boinc boinc     15095 Jul 27 15:25 start_atlas.sh
[2025-07-27 16:57:34] -rw-r--r-- 2 boinc boinc    542885 Jul 27 15:25 input.tar.gz
[2025-07-27 16:57:34] -rw------- 1 boinc boinc 212322589 Jul 27 16:56 HITS.pool.root.1
[2025-07-27 16:57:34] -rw------- 1 boinc boinc    942080 Jul 27 16:57 result.tar.gz
16:57:35 (1643876): run_atlas exited; CPU time 28423.240712
16:57:35 (1643876): called boinc_finish(0)

</stderr_txt>
]]>

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