Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:48:23 (3068088): wrapper (7.7.26015): starting
16:48:23 (3068088): wrapper: running run_atlas (--nthreads 10)
[2025-07-26 16:48:23] Arguments: --nthreads 10
[2025-07-26 16:48:23] Threads: 10
[2025-07-26 16:48:23] Checking for CVMFS
[2025-07-26 16:48:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 16:48:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 16:48:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 16:48:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 16:48:24] 2.13.1.0 128637 5469 150388 148788 0 156 18360368 39288833 3743 16776704 0 5388235 99.840 7050901 41913 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 16:48:24] CVMFS is ok
[2025-07-26 16:48:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 16:48:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 16:48:24] Further information can be found at the LHC@home message board.
[2025-07-26 16:48:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 16:48:24] Checking for apptainer binary...
[2025-07-26 16:48:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 16:48:24] Running /usr/bin/apptainer --version
[2025-07-26 16:48:24] apptainer version 1.4.1-1.el9
[2025-07-26 16:48:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 16:48:24] c-210-5.aglt2.org
[2025-07-26 16:48:24] apptainer works
[2025-07-26 16:48:24] Set ATHENA_PROC_NUMBER=10
[2025-07-26 16:48:24] Set ATHENA_CORE_NUMBER=10
[2025-07-26 16:48:24] Starting ATLAS job with PandaID=6745133897
[2025-07-26 16:48:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 18:27:42]  *** The last 200 lines of the pilot log: ***
[2025-07-26 18:27:42]  is_altstaged=None
[2025-07-26 18:27:42]  is_tar=False
[2025-07-26 18:27:42]  lfn=log.45743349._036899.job.log.tgz.1
[2025-07-26 18:27:42]  mtime=0
[2025-07-26 18:27:42]  protocol_id=None
[2025-07-26 18:27:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 18:27:42]  replicas=None
[2025-07-26 18:27:42]  scope=mc23_13p6TeV
[2025-07-26 18:27:42]  status=None
[2025-07-26 18:27:42]  status_code=0
[2025-07-26 18:27:42]  storage_token=
[2025-07-26 18:27:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745133897/log.45743349._036899.job.log.tgz.1
[2025-07-26 18:27:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/f5/log.45743349._036899.job.log.tgz.1
[2025-07-26 18:27:42]  workdir=None
[2025-07-26 18:27:42] ]
[2025-07-26 18:27:42] 2025-07-26 22:27:03,747 | INFO     | transferring file log.45743349._036899.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745133897/log.45743349._036899.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 18:27:42] 2025-07-26 22:27:03,748 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745133897/log.45743349._036899.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._036899.job
[2025-07-26 18:27:42] 2025-07-26 22:27:03,765 | INFO     | adding to output.list: log.45743349._036899.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/f5/log.45743349._036899.job.log.tg
[2025-07-26 18:27:42] 2025-07-26 22:27:03,766 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 18:27:42] 2025-07-26 22:27:03,766 | INFO     | summary of transferred files:
[2025-07-26 18:27:42] 2025-07-26 22:27:03,766 | INFO     |  -- lfn=log.45743349._036899.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 18:27:42] 2025-07-26 22:27:03,767 | INFO     | stage-out finished correctly
[2025-07-26 18:27:42] 2025-07-26 22:27:03,853 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 18:27:42] 2025-07-26 22:27:04,532 | INFO     | job 6745133897 has state=finished
[2025-07-26 18:27:42] 2025-07-26 22:27:04,532 | INFO     | preparing for final server update for job 6745133897 in state='finished'
[2025-07-26 18:27:42] 2025-07-26 22:27:04,533 | INFO     | this job has now completed (state=finished)
[2025-07-26 18:27:42] 2025-07-26 22:27:04,533 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 18:27:42] 2025-07-26 22:27:04,533 | INFO     | log transfer has been attempted: DONE
[2025-07-26 18:27:42] 2025-07-26 22:27:04,533 | INFO     | job 6745133897 has finished - writing final server update
[2025-07-26 18:27:42] 2025-07-26 22:27:04,533 | INFO     | total number of processed events: 400 (read)
[2025-07-26 18:27:42] 2025-07-26 22:27:04,534 | INFO     | executing command: lscpu
[2025-07-26 18:27:42] 2025-07-26 22:27:04,577 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 18:27:42] 2025-07-26 22:27:05,467 | INFO     | monitor loop #443: job 0:6745133897 is in state 'finished'
[2025-07-26 18:27:42] 2025-07-26 22:27:05,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 18:27:42] 2025-07-26 22:27:07,970 | INFO     | monitor loop #444: job 0:6745133897 is in state 'finished'
[2025-07-26 18:27:42] 2025-07-26 22:27:07,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 18:27:42] 2025-07-26 22:27:08,548 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 18:27:42] 2025-07-26 22:27:08,554 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2088999999996
[2025-07-26 18:27:42] 2025-07-26 22:27:08,560 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745133897/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 18:27:42] 2025-07-26 22:27:08,561 | INFO     | extracted standard info from prmon json
[2025-07-26 18:27:42] 2025-07-26 22:27:08,561 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 18:27:42] 2025-07-26 22:27:08,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 18:27:42] 2025-07-26 22:27:08,562 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 18:27:42] 2025-07-26 22:27:08,562 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 18:27:42] 2025-07-26 22:27:08,564 | INFO     | fitting pss+swap vs Time
[2025-07-26 18:27:42] 2025-07-26 22:27:08,565 | INFO     | sum of square deviations: 226022842.5
[2025-07-26 18:27:42] 2025-07-26 22:27:08,565 | INFO     | sum of deviations: -14980770339.0
[2025-07-26 18:27:42] 2025-07-26 22:27:08,565 | INFO     | mean x: 1753565963.5
[2025-07-26 18:27:42] 2025-07-26 22:27:08,565 | INFO     | mean y: 2756842.355555556
[2025-07-26 18:27:42] 2025-07-26 22:27:08,566 | INFO     | -- intersect: 116228925325.66165
[2025-07-26 18:27:42] 2025-07-26 22:27:08,566 | INFO     | intersect: 116228925325.66165
[2025-07-26 18:27:42] 2025-07-26 22:27:08,566 | INFO     | chi2: 0.16687103444074333
[2025-07-26 18:27:42] 2025-07-26 22:27:08,566 | INFO     | -- intersect: 116228925325.66165
[2025-07-26 18:27:42] 2025-07-26 22:27:08,566 | INFO     | current memory leak: -66.28 B/s (using 90 data points, chi2=0.17)
[2025-07-26 18:27:42] 2025-07-26 22:27:08,567 | INFO     | could have reported an average CPU frequency of 2600 MHz (7 samples)
[2025-07-26 18:27:42] 2025-07-26 22:27:08,567 | INFO     | ..............................
[2025-07-26 18:27:42] 2025-07-26 22:27:08,567 | INFO     | . Timing measurements:
[2025-07-26 18:27:42] 2025-07-26 22:27:08,567 | INFO     | . get job = 0 s
[2025-07-26 18:27:42] 2025-07-26 22:27:08,567 | INFO     | . initial setup = 2 s
[2025-07-26 18:27:42] 2025-07-26 22:27:08,567 | INFO     | . payload setup = 7 s
[2025-07-26 18:27:42] 2025-07-26 22:27:08,567 | INFO     | . stage-in = 0 s
[2025-07-26 18:27:42] 2025-07-26 22:27:08,567 | INFO     | . payload execution = 5880 s
[2025-07-26 18:27:42] 2025-07-26 22:27:08,567 | INFO     | . stage-out = 0 s
[2025-07-26 18:27:42] 2025-07-26 22:27:08,567 | INFO     | . log creation = 0 s
[2025-07-26 18:27:42] 2025-07-26 22:27:08,567 | INFO     | ..............................
[2025-07-26 18:27:42] 2025-07-26 22:27:08,660 | INFO     | 
[2025-07-26 18:27:42] 2025-07-26 22:27:08,660 | INFO     | job summary report
[2025-07-26 18:27:42] 2025-07-26 22:27:08,661 | INFO     | --------------------------------------------------
[2025-07-26 18:27:42] 2025-07-26 22:27:08,661 | INFO     | PanDA job id: 6745133897
[2025-07-26 18:27:42] 2025-07-26 22:27:08,661 | INFO     | task id: 45743349
[2025-07-26 18:27:42] 2025-07-26 22:27:08,661 | INFO     | errors: (none)
[2025-07-26 18:27:42] 2025-07-26 22:27:08,661 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 18:27:42] 2025-07-26 22:27:08,661 | INFO     | pilot state: finished 
[2025-07-26 18:27:42] 2025-07-26 22:27:08,661 | INFO     | transexitcode: 0
[2025-07-26 18:27:42] 2025-07-26 22:27:08,661 | INFO     | exeerrorcode: 0
[2025-07-26 18:27:42] 2025-07-26 22:27:08,661 | INFO     | exeerrordiag: 
[2025-07-26 18:27:42] 2025-07-26 22:27:08,662 | INFO     | exitcode: 0
[2025-07-26 18:27:42] 2025-07-26 22:27:08,662 | INFO     | exitmsg: OK
[2025-07-26 18:27:42] 2025-07-26 22:27:08,662 | INFO     | cpuconsumptiontime: 53375 s
[2025-07-26 18:27:42] 2025-07-26 22:27:08,662 | INFO     | nevents: 400
[2025-07-26 18:27:42] 2025-07-26 22:27:08,662 | INFO     | neventsw: 0
[2025-07-26 18:27:42] 2025-07-26 22:27:08,662 | INFO     | pid: 3078174
[2025-07-26 18:27:42] 2025-07-26 22:27:08,662 | INFO     | pgrp: 3078174
[2025-07-26 18:27:42] 2025-07-26 22:27:08,662 | INFO     | corecount: 10
[2025-07-26 18:27:42] 2025-07-26 22:27:08,662 | INFO     | event service: False
[2025-07-26 18:27:42] 2025-07-26 22:27:08,663 | INFO     | sizes: {0: 2397248, 1: 2397503, 5: 2397765, 12: 2397821, 5891: 2424495, 5892: 2433677, 5896: 2433815}
[2025-07-26 18:27:42] 2025-07-26 22:27:08,663 | INFO     | --------------------------------------------------
[2025-07-26 18:27:42] 2025-07-26 22:27:08,663 | INFO     | 
[2025-07-26 18:27:42] 2025-07-26 22:27:08,663 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 18:27:42] 2025-07-26 22:27:08,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,687 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,687 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,687 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,688 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 18:27:42] 2025-07-26 22:27:08,689 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,689 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 18:27:42] 2025-07-26 22:27:08,689 | INFO     | job 6745133897 has completed (purged errors)
[2025-07-26 18:27:42] 2025-07-26 22:27:08,689 | INFO     | overall cleanup function is called
[2025-07-26 18:27:42] 2025-07-26 22:27:09,697 | INFO     | --- collectZombieJob: --- 10, [3078174]
[2025-07-26 18:27:42] 2025-07-26 22:27:09,698 | INFO     | zombie collector waiting for pid 3078174
[2025-07-26 18:27:42] 2025-07-26 22:27:09,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 18:27:42] 2025-07-26 22:27:09,698 | INFO     | collected zombie processes
[2025-07-26 18:27:42] 2025-07-26 22:27:09,698 | INFO     | will attempt to kill all subprocesses of pid=3078174
[2025-07-26 18:27:42] 2025-07-26 22:27:09,913 | INFO     | process IDs to be killed: [3078174] (in reverse order)
[2025-07-26 18:27:42] 2025-07-26 22:27:09,987 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 18:27:42] 2025-07-26 22:27:09,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 18:27:42] 2025-07-26 22:27:09,997 | INFO     | did not find any defunct processes belonging to 3078174
[2025-07-26 18:27:42] 2025-07-26 22:27:10,006 | INFO     | did not find any defunct processes belonging to 3078174
[2025-07-26 18:27:42] 2025-07-26 22:27:10,006 | INFO     | ready for new job
[2025-07-26 18:27:42] 2025-07-26 22:27:10,006 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 18:27:42] 2025-07-26 22:27:10,008 | INFO     | ***************************************
[2025-07-26 18:27:42] 2025-07-26 22:27:10,008 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 18:27:42] 2025-07-26 22:27:10,008 | INFO     | ***************************************
[2025-07-26 18:27:42] 2025-07-26 22:27:10,008 | INFO     | 
[2025-07-26 18:27:42] 2025-07-26 22:27:10,010 | INFO     | architecture information:
[2025-07-26 18:27:42] 2025-07-26 22:27:10,011 | INFO     | executing command: cat /etc/os-release
[2025-07-26 18:27:42] 2025-07-26 22:27:10,028 | INFO     | cat /etc/os-release:
[2025-07-26 18:27:42] NAME="CentOS Linux"
[2025-07-26 18:27:42] VERSION="7 (Core)"
[2025-07-26 18:27:42] ID="centos"
[2025-07-26 18:27:42] ID_LIKE="rhel fedora"
[2025-07-26 18:27:42] VERSION_ID="7"
[2025-07-26 18:27:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 18:27:42] ANSI_COLOR="0;31"
[2025-07-26 18:27:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 18:27:42] HOME_URL="https://www.centos.org/"
[2025-07-26 18:27:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 18:27:42] 
[2025-07-26 18:27:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 18:27:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 18:27:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 18:27:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 18:27:42] 
[2025-07-26 18:27:42] 2025-07-26 22:27:10,029 | INFO     | ***************************************
[2025-07-26 18:27:42] 2025-07-26 22:27:10,532 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 18:27:42] 2025-07-26 22:27:10,545 | INFO     | sufficient remaining disk space (53996421120 B)
[2025-07-26 18:27:42] 2025-07-26 22:27:10,546 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 18:27:42] 2025-07-26 22:27:10,546 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 18:27:42] 2025-07-26 22:27:10,546 | INFO     | update_server=False
[2025-07-26 18:27:42] 2025-07-26 22:27:10,546 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 18:27:42] 2025-07-26 22:27:10,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:27:42] 2025-07-26 22:27:10,547 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 18:27:42] 2025-07-26 22:27:10,764 | INFO     | all job control threads have been joined
[2025-07-26 18:27:42] 2025-07-26 22:27:10,769 | INFO     | all data control threads have been joined
[2025-07-26 18:27:42] 2025-07-26 22:27:10,867 | INFO     | all payload control threads have been joined
[2025-07-26 18:27:42] 2025-07-26 22:27:11,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:27:42] 2025-07-26 22:27:11,479 | INFO     | aborting loop
[2025-07-26 18:27:42] 2025-07-26 22:27:11,552 | INFO     | [job] queue monitor thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:11,552 | INFO     | [job] retrieve thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:11,640 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:11,769 | INFO     | [job] control thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:11,774 | INFO     | [data] control thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:11,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 18:27:42] 2025-07-26 22:27:11,872 | INFO     | [payload] control thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:11,883 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:11,960 | INFO     | [data] copytool_in thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:11,998 | INFO     | [payload] validate_post thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:12,484 | INFO     | [job] job monitor thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:12,666 | INFO     | [payload] failed_post thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:12,795 | INFO     | [job] validate thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:12,911 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:13,865 | INFO     | [data] copytool_out thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:14,552 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:21,433 | INFO     | job.realtimelogging is not enabled
[2025-07-26 18:27:42] 2025-07-26 22:27:22,437 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 18:27:42] 2025-07-26 22:27:24,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139892801464128)>', '<ExcThread(monitor, started 139892168316672)>']
[2025-07-26 18:27:42] 2025-07-26 22:27:29,400 | INFO     | all workflow threads have been joined
[2025-07-26 18:27:42] 2025-07-26 22:27:29,401 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 18:27:42] 2025-07-26 22:27:29,401 | INFO     | traces error code: 0
[2025-07-26 18:27:42] 2025-07-26 22:27:29,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 18:27:42] 2025-07-26 22:27:41,762 | INFO     | PID=3071688 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 18:27:42] 2025-07-26 22:27:41,762 | INFO     | .. there are 6 such processes running
[2025-07-26 18:27:42] 2025-07-26 22:27:41,763 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 18:27:42] 2025-07-26 22:27:41,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 18:27:42] 2025-07-26 22:27:41,763 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 18:27:42] 2025-07-26 22:27:41,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 18:27:42] 2025-07-26 22:27:41,763 | INFO     | [monitor] control thread has ended
[2025-07-26 18:27:42] 2025-07-26 22:27:41,880 [wrapper] ==== pilot stdout END ====
[2025-07-26 18:27:42] 2025-07-26 22:27:41,884 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 18:27:42] 2025-07-26 22:27:41,888 [wrapper] pilotpid: 3071688
[2025-07-26 18:27:42] 2025-07-26 22:27:41,892 [wrapper] Pilot exit status: 0
[2025-07-26 18:27:42] 2025-07-26 22:27:41,905 [wrapper] pandaids: 6745133897
[2025-07-26 18:27:42] 2025-07-26 22:27:41,955 [wrapper] cleanup supervisor_pilot 3190507 3071689
[2025-07-26 18:27:42] 2025-07-26 22:27:41,959 [wrapper] Test setup, not cleaning
[2025-07-26 18:27:42] 2025-07-26 22:27:41,964 [wrapper] apfmon messages muted
[2025-07-26 18:27:42] 2025-07-26 22:27:41,967 [wrapper] ==== wrapper stdout END ====
[2025-07-26 18:27:42] 2025-07-26 22:27:41,971 [wrapper] ==== wrapper stderr END ====
[2025-07-26 18:27:42]  *** Error codes and diagnostics ***
[2025-07-26 18:27:42]     "exeErrorCode": 0,
[2025-07-26 18:27:42]     "exeErrorDiag": "",
[2025-07-26 18:27:42]     "pilotErrorCode": 0,
[2025-07-26 18:27:42]     "pilotErrorDiag": "",
[2025-07-26 18:27:42]  *** Listing of results directory ***
[2025-07-26 18:27:42] total 352212
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 07:03 pilot3.tar.gz
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 07:16 queuedata.json
[2025-07-26 18:27:42] -rwx------. 1 boincer umatlas     36292 Jul 26 07:17 runpilot2-wrapper.sh
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas       100 Jul 26 16:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 18:27:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 16:48 run_atlas
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas       105 Jul 26 16:48 job.xml
[2025-07-26 18:27:42] -rw-r--r--. 2 boincer umatlas 146985673 Jul 26 16:48 EVNT.45743347._002107.pool.root.1
[2025-07-26 18:27:42] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:48 start_atlas.sh
[2025-07-26 18:27:42] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 16:48 shared
[2025-07-26 18:27:42] -rw-r--r--. 2 boincer umatlas    542895 Jul 26 16:48 input.tar.gz
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas         0 Jul 26 16:48 boinc_lockfile
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 16:48 pandaJob.out
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas    980125 Jul 26 16:48 agis_schedconf.cvmfs.json
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas   1593052 Jul 26 16:48 agis_ddmendpoints.agis.ALL.json
[2025-07-26 18:27:42] drwx------. 4 boincer umatlas      4096 Jul 26 16:48 pilot3
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas      6655 Jul 26 18:20 init_data.xml
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas 207965017 Jul 26 18:26 HITS.45743349._036899.pool.root.1
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas       530 Jul 26 18:26 boinc_task_state.xml
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas      1037 Jul 26 18:26 memory_monitor_summary.json
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas    341037 Jul 26 18:27 log.45743349._036899.job.log.tgz.1
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas      7819 Jul 26 18:27 heartbeat.json
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas        95 Jul 26 18:27 pilot_heartbeat.json
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas        27 Jul 26 18:27 wrapper_checkpoint.txt
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 18:27 boinc_mmap_file
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas       822 Jul 26 18:27 pilotlog.txt
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas    578272 Jul 26 18:27 log.45743349._036899.job.log.1
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas       357 Jul 26 18:27 output.list
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas       620 Jul 26 18:27 runtime_log
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas    942080 Jul 26 18:27 result.tar.gz
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas      8657 Jul 26 18:27 runtime_log.err
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas       652 Jul 26 18:27 EOUKDm34rz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfxRLDm1H1sbn.diag
[2025-07-26 18:27:42] -rw-r--r--. 1 boincer umatlas     21474 Jul 26 18:27 stderr.txt
[2025-07-26 18:27:42] HITS file was successfully produced:
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas 207965017 Jul 26 18:26 shared/HITS.pool.root.1
[2025-07-26 18:27:42]  *** Contents of shared directory: ***
[2025-07-26 18:27:42] total 348104
[2025-07-26 18:27:42] -rw-r--r--. 2 boincer umatlas 146985673 Jul 26 16:48 ATLAS.root_0
[2025-07-26 18:27:42] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:48 start_atlas.sh
[2025-07-26 18:27:42] -rw-r--r--. 2 boincer umatlas    542895 Jul 26 16:48 input.tar.gz
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas 207965017 Jul 26 18:26 HITS.pool.root.1
[2025-07-26 18:27:42] -rw-------. 1 boincer umatlas    942080 Jul 26 18:27 result.tar.gz
18:27:43 (3068088): run_atlas exited; CPU time 53424.144721
18:27:43 (3068088): called boinc_finish(0)

</stderr_txt>
]]>

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