Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:46:16 (1787847): wrapper (7.7.26015): starting
16:46:16 (1787847): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 16:46:16] Arguments: --nthreads 12
[2025-07-26 16:46:16] Threads: 12
[2025-07-26 16:46:16] Checking for CVMFS
[2025-07-26 16:46:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 16:46:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 16:46:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 16:46:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 16:46:17] 2.13.0.0 842134 17422 366140 148788 0 429 32710646 32935937 11915 16776704 0 39597474 99.701 70533161 32675 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 16:46:17] CVMFS is ok
[2025-07-26 16:46:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 16:46:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 16:46:17] Further information can be found at the LHC@home message board.
[2025-07-26 16:46:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 16:46:17] Checking for apptainer binary...
[2025-07-26 16:46:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 16:46:17] Running /usr/bin/apptainer --version
[2025-07-26 16:46:17] apptainer version 1.4.1-1.el9
[2025-07-26 16:46:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 16:46:17] c6-5-37-2.aglt2.org
[2025-07-26 16:46:17] apptainer works
[2025-07-26 16:46:17] Set ATHENA_PROC_NUMBER=12
[2025-07-26 16:46:17] Set ATHENA_CORE_NUMBER=12
[2025-07-26 16:46:17] Starting ATLAS job with PandaID=6745229866
[2025-07-26 16:46:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 18:19:41]  *** The last 200 lines of the pilot log: ***
[2025-07-26 18:19:41]  lfn=log.45743349._039774.job.log.tgz.1
[2025-07-26 18:19:41]  mtime=0
[2025-07-26 18:19:41]  protocol_id=None
[2025-07-26 18:19:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 18:19:41]  replicas=None
[2025-07-26 18:19:41]  scope=mc23_13p6TeV
[2025-07-26 18:19:41]  status=None
[2025-07-26 18:19:41]  status_code=0
[2025-07-26 18:19:41]  storage_token=
[2025-07-26 18:19:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745229866/log.45743349._039774.job.log.tgz.1
[2025-07-26 18:19:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/89/log.45743349._039774.job.log.tgz.1
[2025-07-26 18:19:41]  workdir=None
[2025-07-26 18:19:41] ]
[2025-07-26 18:19:41] 2025-07-26 22:19:03,940 | INFO     | transferring file log.45743349._039774.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745229866/log.45743349._039774.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 18:19:41] 2025-07-26 22:19:03,940 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745229866/log.45743349._039774.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._039774.job
[2025-07-26 18:19:41] 2025-07-26 22:19:03,962 | INFO     | adding to output.list: log.45743349._039774.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/89/log.45743349._039774.job.log.tg
[2025-07-26 18:19:41] 2025-07-26 22:19:03,963 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 18:19:41] 2025-07-26 22:19:03,963 | INFO     | summary of transferred files:
[2025-07-26 18:19:41] 2025-07-26 22:19:03,963 | INFO     |  -- lfn=log.45743349._039774.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 18:19:41] 2025-07-26 22:19:03,963 | INFO     | stage-out finished correctly
[2025-07-26 18:19:41] 2025-07-26 22:19:04,634 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 18:19:41] 2025-07-26 22:19:04,697 | INFO     | job 6745229866 has state=finished
[2025-07-26 18:19:41] 2025-07-26 22:19:04,697 | INFO     | preparing for final server update for job 6745229866 in state='finished'
[2025-07-26 18:19:41] 2025-07-26 22:19:04,698 | INFO     | this job has now completed (state=finished)
[2025-07-26 18:19:41] 2025-07-26 22:19:04,698 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 18:19:41] 2025-07-26 22:19:04,698 | INFO     | log transfer has been attempted: DONE
[2025-07-26 18:19:41] 2025-07-26 22:19:04,698 | INFO     | job 6745229866 has finished - writing final server update
[2025-07-26 18:19:41] 2025-07-26 22:19:04,699 | INFO     | total number of processed events: 400 (read)
[2025-07-26 18:19:41] 2025-07-26 22:19:04,699 | INFO     | executing command: lscpu
[2025-07-26 18:19:41] 2025-07-26 22:19:04,770 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 18:19:41] 2025-07-26 22:19:05,342 | INFO     | monitor loop #390: job 0:6745229866 is in state 'finished'
[2025-07-26 18:19:41] 2025-07-26 22:19:05,343 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 18:19:41] 2025-07-26 22:19:07,845 | INFO     | monitor loop #391: job 0:6745229866 is in state 'finished'
[2025-07-26 18:19:41] 2025-07-26 22:19:07,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 18:19:41] 2025-07-26 22:19:08,663 | INFO     | PID=1791416 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 18:19:41] 2025-07-26 22:19:08,663 | INFO     | .. there are 11 such processes running
[2025-07-26 18:19:41] 2025-07-26 22:19:08,736 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 18:19:41] 2025-07-26 22:19:08,745 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2692.6938392857146
[2025-07-26 18:19:41] 2025-07-26 22:19:08,755 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745229866/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 18:19:41] 2025-07-26 22:19:08,756 | INFO     | extracted standard info from prmon json
[2025-07-26 18:19:41] 2025-07-26 22:19:08,756 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 18:19:41] 2025-07-26 22:19:08,756 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 18:19:41] 2025-07-26 22:19:08,757 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 18:19:41] 2025-07-26 22:19:08,757 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 18:19:41] 2025-07-26 22:19:08,759 | INFO     | fitting pss+swap vs Time
[2025-07-26 18:19:41] 2025-07-26 22:19:08,759 | INFO     | sum of square deviations: 183773866.0357141
[2025-07-26 18:19:41] 2025-07-26 22:19:08,760 | INFO     | sum of deviations: -13064663588.03572
[2025-07-26 18:19:41] 2025-07-26 22:19:08,760 | INFO     | mean x: 1753565657.892857
[2025-07-26 18:19:41] 2025-07-26 22:19:08,760 | INFO     | mean y: 2482700.773809524
[2025-07-26 18:19:41] 2025-07-26 22:19:08,760 | INFO     | -- intersect: 124665177642.66777
[2025-07-26 18:19:41] 2025-07-26 22:19:08,760 | INFO     | intersect: 124665177642.66777
[2025-07-26 18:19:41] 2025-07-26 22:19:08,761 | INFO     | chi2: 0.1924443723419701
[2025-07-26 18:19:41] 2025-07-26 22:19:08,761 | INFO     | -- intersect: 124665177642.66777
[2025-07-26 18:19:41] 2025-07-26 22:19:08,761 | INFO     | current memory leak: -71.09 B/s (using 84 data points, chi2=0.19)
[2025-07-26 18:19:41] 2025-07-26 22:19:08,761 | INFO     | could have reported an average CPU frequency of 2614 MHz (7 samples)
[2025-07-26 18:19:41] 2025-07-26 22:19:08,762 | INFO     | ..............................
[2025-07-26 18:19:41] 2025-07-26 22:19:08,762 | INFO     | . Timing measurements:
[2025-07-26 18:19:41] 2025-07-26 22:19:08,762 | INFO     | . get job = 0 s
[2025-07-26 18:19:41] 2025-07-26 22:19:08,762 | INFO     | . initial setup = 2 s
[2025-07-26 18:19:41] 2025-07-26 22:19:08,762 | INFO     | . payload setup = 8 s
[2025-07-26 18:19:41] 2025-07-26 22:19:08,762 | INFO     | . stage-in = 0 s
[2025-07-26 18:19:41] 2025-07-26 22:19:08,762 | INFO     | . payload execution = 5523 s
[2025-07-26 18:19:41] 2025-07-26 22:19:08,762 | INFO     | . stage-out = 0 s
[2025-07-26 18:19:41] 2025-07-26 22:19:08,762 | INFO     | . log creation = 0 s
[2025-07-26 18:19:41] 2025-07-26 22:19:08,762 | INFO     | ..............................
[2025-07-26 18:19:41] 2025-07-26 22:19:08,839 | INFO     | 
[2025-07-26 18:19:41] 2025-07-26 22:19:08,839 | INFO     | job summary report
[2025-07-26 18:19:41] 2025-07-26 22:19:08,839 | INFO     | --------------------------------------------------
[2025-07-26 18:19:41] 2025-07-26 22:19:08,839 | INFO     | PanDA job id: 6745229866
[2025-07-26 18:19:41] 2025-07-26 22:19:08,839 | INFO     | task id: 45743349
[2025-07-26 18:19:41] 2025-07-26 22:19:08,839 | INFO     | errors: (none)
[2025-07-26 18:19:41] 2025-07-26 22:19:08,839 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 18:19:41] 2025-07-26 22:19:08,839 | INFO     | pilot state: finished 
[2025-07-26 18:19:41] 2025-07-26 22:19:08,839 | INFO     | transexitcode: 0
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | exeerrorcode: 0
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | exeerrordiag: 
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | exitcode: 0
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | exitmsg: OK
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | cpuconsumptiontime: 47525 s
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | nevents: 400
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | neventsw: 0
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | pid: 1798425
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | pgrp: 1798425
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | corecount: 12
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | event service: False
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 5536: 2424383, 5537: 2433381, 5538: 2433565, 5542: 2433759}
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | --------------------------------------------------
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | 
[2025-07-26 18:19:41] 2025-07-26 22:19:08,840 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 18:19:41] 2025-07-26 22:19:08,857 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,858 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 18:19:41] 2025-07-26 22:19:08,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,859 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 18:19:41] 2025-07-26 22:19:08,859 | INFO     | job 6745229866 has completed (purged errors)
[2025-07-26 18:19:41] 2025-07-26 22:19:08,859 | INFO     | overall cleanup function is called
[2025-07-26 18:19:41] 2025-07-26 22:19:09,866 | INFO     | --- collectZombieJob: --- 10, [1798425]
[2025-07-26 18:19:41] 2025-07-26 22:19:09,866 | INFO     | zombie collector waiting for pid 1798425
[2025-07-26 18:19:41] 2025-07-26 22:19:09,866 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 18:19:41] 2025-07-26 22:19:09,866 | INFO     | collected zombie processes
[2025-07-26 18:19:41] 2025-07-26 22:19:09,867 | INFO     | will attempt to kill all subprocesses of pid=1798425
[2025-07-26 18:19:41] 2025-07-26 22:19:10,085 | INFO     | process IDs to be killed: [1798425] (in reverse order)
[2025-07-26 18:19:41] 2025-07-26 22:19:10,190 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 18:19:41] 2025-07-26 22:19:10,191 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 18:19:41] 2025-07-26 22:19:10,198 | INFO     | did not find any defunct processes belonging to 1798425
[2025-07-26 18:19:41] 2025-07-26 22:19:10,208 | INFO     | did not find any defunct processes belonging to 1798425
[2025-07-26 18:19:41] 2025-07-26 22:19:10,209 | INFO     | ready for new job
[2025-07-26 18:19:41] 2025-07-26 22:19:10,209 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 18:19:41] 2025-07-26 22:19:10,211 | INFO     | ***************************************
[2025-07-26 18:19:41] 2025-07-26 22:19:10,211 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 18:19:41] 2025-07-26 22:19:10,212 | INFO     | ***************************************
[2025-07-26 18:19:41] 2025-07-26 22:19:10,212 | INFO     | 
[2025-07-26 18:19:41] 2025-07-26 22:19:10,227 | INFO     | architecture information:
[2025-07-26 18:19:41] 2025-07-26 22:19:10,228 | INFO     | executing command: cat /etc/os-release
[2025-07-26 18:19:41] 2025-07-26 22:19:10,241 | INFO     | cat /etc/os-release:
[2025-07-26 18:19:41] NAME="CentOS Linux"
[2025-07-26 18:19:41] VERSION="7 (Core)"
[2025-07-26 18:19:41] ID="centos"
[2025-07-26 18:19:41] ID_LIKE="rhel fedora"
[2025-07-26 18:19:41] VERSION_ID="7"
[2025-07-26 18:19:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 18:19:41] ANSI_COLOR="0;31"
[2025-07-26 18:19:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 18:19:41] HOME_URL="https://www.centos.org/"
[2025-07-26 18:19:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 18:19:41] 
[2025-07-26 18:19:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 18:19:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 18:19:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 18:19:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 18:19:41] 
[2025-07-26 18:19:41] 2025-07-26 22:19:10,241 | INFO     | ***************************************
[2025-07-26 18:19:41] 2025-07-26 22:19:10,744 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 18:19:41] 2025-07-26 22:19:10,757 | INFO     | sufficient remaining disk space (76536610816 B)
[2025-07-26 18:19:41] 2025-07-26 22:19:10,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 18:19:41] 2025-07-26 22:19:10,757 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 18:19:41] 2025-07-26 22:19:10,757 | INFO     | update_server=False
[2025-07-26 18:19:41] 2025-07-26 22:19:10,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 18:19:41] 2025-07-26 22:19:10,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:19:41] 2025-07-26 22:19:10,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 18:19:41] 2025-07-26 22:19:11,176 | INFO     | all data control threads have been joined
[2025-07-26 18:19:41] 2025-07-26 22:19:11,294 | INFO     | all payload control threads have been joined
[2025-07-26 18:19:41] 2025-07-26 22:19:11,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:19:41] 2025-07-26 22:19:11,353 | INFO     | aborting loop
[2025-07-26 18:19:41] 2025-07-26 22:19:11,762 | INFO     | [job] retrieve thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:11,763 | INFO     | [job] queue monitor thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:11,985 | INFO     | [payload] validate_post thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:12,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 18:19:41] 2025-07-26 22:19:12,181 | INFO     | [data] control thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:12,297 | INFO     | [payload] control thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:12,356 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:12,358 | INFO     | [job] job monitor thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:12,446 | INFO     | all job control threads have been joined
[2025-07-26 18:19:41] 2025-07-26 22:19:12,590 | INFO     | [data] copytool_in thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:12,623 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:12,640 | INFO     | [payload] failed_post thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:12,684 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:13,233 | INFO     | [job] validate thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:13,451 | INFO     | [job] control thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:14,062 | INFO     | [data] copytool_out thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:14,763 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:20,969 | INFO     | job.realtimelogging is not enabled
[2025-07-26 18:19:41] 2025-07-26 22:19:21,974 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 18:19:41] 2025-07-26 22:19:22,638 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620175890240)>', '<ExcThread(monitor, started 140619678725888)>']
[2025-07-26 18:19:41] 2025-07-26 22:19:27,663 | INFO     | all workflow threads have been joined
[2025-07-26 18:19:41] 2025-07-26 22:19:27,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 18:19:41] 2025-07-26 22:19:27,664 | INFO     | traces error code: 0
[2025-07-26 18:19:41] 2025-07-26 22:19:27,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 18:19:41] 2025-07-26 22:19:40,982 | INFO     | PID=1791416 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 18:19:41] 2025-07-26 22:19:40,982 | INFO     | .. there are 11 such processes running
[2025-07-26 18:19:41] 2025-07-26 22:19:40,982 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 18:19:41] 2025-07-26 22:19:40,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 18:19:41] 2025-07-26 22:19:40,982 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 18:19:41] 2025-07-26 22:19:40,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 18:19:41] 2025-07-26 22:19:40,983 | INFO     | [monitor] control thread has ended
[2025-07-26 18:19:41] 2025-07-26 22:19:41,154 [wrapper] ==== pilot stdout END ====
[2025-07-26 18:19:41] 2025-07-26 22:19:41,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 18:19:41] 2025-07-26 22:19:41,161 [wrapper] pilotpid: 1791416
[2025-07-26 18:19:41] 2025-07-26 22:19:41,164 [wrapper] Pilot exit status: 0
[2025-07-26 18:19:41] 2025-07-26 22:19:41,176 [wrapper] pandaids: 6745229866
[2025-07-26 18:19:41] 2025-07-26 22:19:41,232 [wrapper] cleanup supervisor_pilot 1912799 1791417
[2025-07-26 18:19:41] 2025-07-26 22:19:41,236 [wrapper] Test setup, not cleaning
[2025-07-26 18:19:41] 2025-07-26 22:19:41,240 [wrapper] apfmon messages muted
[2025-07-26 18:19:41] 2025-07-26 22:19:41,243 [wrapper] ==== wrapper stdout END ====
[2025-07-26 18:19:41] 2025-07-26 22:19:41,245 [wrapper] ==== wrapper stderr END ====
[2025-07-26 18:19:41]  *** Error codes and diagnostics ***
[2025-07-26 18:19:41]     "exeErrorCode": 0,
[2025-07-26 18:19:41]     "exeErrorDiag": "",
[2025-07-26 18:19:41]     "pilotErrorCode": 0,
[2025-07-26 18:19:41]     "pilotErrorDiag": "",
[2025-07-26 18:19:41]  *** Listing of results directory ***
[2025-07-26 18:19:41] total 350744
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 10:40 pilot3.tar.gz
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 11:04 queuedata.json
[2025-07-26 18:19:41] -rwx------. 1 boincer umatlas     36292 Jul 26 11:04 runpilot2-wrapper.sh
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas       100 Jul 26 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 18:19:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 16:46 run_atlas
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas       105 Jul 26 16:46 job.xml
[2025-07-26 18:19:41] -rw-r--r--. 2 boincer umatlas 145606680 Jul 26 16:46 EVNT.45743347._002265.pool.root.1
[2025-07-26 18:19:41] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:46 start_atlas.sh
[2025-07-26 18:19:41] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 16:46 shared
[2025-07-26 18:19:41] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 16:46 input.tar.gz
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas         0 Jul 26 16:46 boinc_lockfile
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 16:46 pandaJob.out
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas    980125 Jul 26 16:46 agis_schedconf.cvmfs.json
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas   1593052 Jul 26 16:46 agis_ddmendpoints.agis.ALL.json
[2025-07-26 18:19:41] drwx------. 4 boincer umatlas      4096 Jul 26 16:46 pilot3
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas      6843 Jul 26 18:13 init_data.xml
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas 207875903 Jul 26 18:18 HITS.45743349._039774.pool.root.1
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas       529 Jul 26 18:18 boinc_task_state.xml
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas        95 Jul 26 18:18 pilot_heartbeat.json
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas      1048 Jul 26 18:18 memory_monitor_summary.json
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas    376601 Jul 26 18:19 log.45743349._039774.job.log.tgz.1
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas      7817 Jul 26 18:19 heartbeat.json
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 18:19 boinc_mmap_file
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas        27 Jul 26 18:19 wrapper_checkpoint.txt
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas       823 Jul 26 18:19 pilotlog.txt
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas    528667 Jul 26 18:19 log.45743349._039774.job.log.1
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas       357 Jul 26 18:19 output.list
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas       620 Jul 26 18:19 runtime_log
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas    921600 Jul 26 18:19 result.tar.gz
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas       654 Jul 26 18:19 Ul2NDmMdvz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuPSLDmSyBkFn.diag
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas      8667 Jul 26 18:19 runtime_log.err
[2025-07-26 18:19:41] -rw-r--r--. 1 boincer umatlas     21754 Jul 26 18:19 stderr.txt
[2025-07-26 18:19:41] HITS file was successfully produced:
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas 207875903 Jul 26 18:18 shared/HITS.pool.root.1
[2025-07-26 18:19:41]  *** Contents of shared directory: ***
[2025-07-26 18:19:41] total 346652
[2025-07-26 18:19:41] -rw-r--r--. 2 boincer umatlas 145606680 Jul 26 16:46 ATLAS.root_0
[2025-07-26 18:19:41] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:46 start_atlas.sh
[2025-07-26 18:19:41] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 16:46 input.tar.gz
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas 207875903 Jul 26 18:18 HITS.pool.root.1
[2025-07-26 18:19:41] -rw-------. 1 boincer umatlas    921600 Jul 26 18:19 result.tar.gz
18:19:43 (1787847): run_atlas exited; CPU time 47572.920645
18:19:43 (1787847): called boinc_finish(0)

</stderr_txt>
]]>

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