Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:32:56 (828122): wrapper (7.7.26015): starting
16:32:56 (828122): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 16:32:56] Arguments: --nthreads 8
[2025-07-26 16:32:56] Threads: 8
[2025-07-26 16:32:56] Checking for CVMFS
[2025-07-26 16:32:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 16:32:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 16:32:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 16:32:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 16:32:58] 2.13.0.0 3822049 17410 160752 148788 2 456 32729981 40960000 21782 16776704 1 171203681 99.659 151602501 8143 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 16:32:58] CVMFS is ok
[2025-07-26 16:32:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 16:32:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 16:32:58] Further information can be found at the LHC@home message board.
[2025-07-26 16:32:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 16:32:58] Checking for apptainer binary...
[2025-07-26 16:32:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 16:32:58] Running /usr/bin/apptainer --version
[2025-07-26 16:32:59] apptainer version 1.4.1-1.el9
[2025-07-26 16:32:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 16:33:00] c8-6-10.aglt2.org
[2025-07-26 16:33:00] apptainer works
[2025-07-26 16:33:00] Set ATHENA_PROC_NUMBER=8
[2025-07-26 16:33:00] Set ATHENA_CORE_NUMBER=8
[2025-07-26 16:33:00] Starting ATLAS job with PandaID=6745133898
[2025-07-26 16:33:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 18:22:37]  *** The last 200 lines of the pilot log: ***
[2025-07-26 18:22:37] 2025-07-26 22:21:56,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 18:22:37] 2025-07-26 22:21:57,298 | INFO     | PID=847696 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 18:22:37] 2025-07-26 22:21:57,298 | INFO     | .. there are 19 such processes running
[2025-07-26 18:22:37] 2025-07-26 22:21:58,320 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 18:22:37] 2025-07-26 22:21:58,329 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3790.511937500005
[2025-07-26 18:22:37] 2025-07-26 22:21:58,351 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6745133898/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 18:22:37] 2025-07-26 22:21:58,352 | INFO     | extracted standard info from prmon json
[2025-07-26 18:22:37] 2025-07-26 22:21:58,352 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 18:22:37] 2025-07-26 22:21:58,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 18:22:37] 2025-07-26 22:21:58,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 18:22:37] 2025-07-26 22:21:58,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 18:22:37] 2025-07-26 22:21:58,355 | INFO     | fitting pss+swap vs Time
[2025-07-26 18:22:37] 2025-07-26 22:21:58,355 | INFO     | sum of square deviations: 338809253.8446595
[2025-07-26 18:22:37] 2025-07-26 22:21:58,355 | INFO     | sum of deviations: 15543524583.601942
[2025-07-26 18:22:37] 2025-07-26 22:21:58,355 | INFO     | mean x: 1753565321.038835
[2025-07-26 18:22:37] 2025-07-26 22:21:58,355 | INFO     | mean y: 2095798.349514563
[2025-07-26 18:22:37] 2025-07-26 22:21:58,355 | INFO     | -- intersect: -80446077819.17459
[2025-07-26 18:22:37] 2025-07-26 22:21:58,355 | INFO     | intersect: -80446077819.17459
[2025-07-26 18:22:37] 2025-07-26 22:21:58,355 | INFO     | chi2: 4.21449225763277
[2025-07-26 18:22:37] 2025-07-26 22:21:58,356 | INFO     | sum of square deviations: 291823546.3367351
[2025-07-26 18:22:37] 2025-07-26 22:21:58,356 | INFO     | sum of deviations: 20586173606.61222
[2025-07-26 18:22:37] 2025-07-26 22:21:58,356 | INFO     | mean x: 1753565168.5408163
[2025-07-26 18:22:37] 2025-07-26 22:21:58,356 | INFO     | mean y: 2111377.3469387754
[2025-07-26 18:22:37] 2025-07-26 22:21:58,356 | INFO     | -- intersect: -123700027957.34064
[2025-07-26 18:22:37] 2025-07-26 22:21:58,356 | INFO     | intersect: -123700027957.34064
[2025-07-26 18:22:37] 2025-07-26 22:21:58,356 | INFO     | chi2: 3.445485155627047
[2025-07-26 18:22:37] 2025-07-26 22:21:58,356 | INFO     | current chi2=3.445485155627047 (change=18.246731871745453 %)
[2025-07-26 18:22:37] 2025-07-26 22:21:58,356 | INFO     | right removable region: 97
[2025-07-26 18:22:37] 2025-07-26 22:21:58,356 | INFO     | sum of square deviations: 291821106.3367351
[2025-07-26 18:22:37] 2025-07-26 22:21:58,356 | INFO     | sum of deviations: -8477881620.704081
[2025-07-26 18:22:37] 2025-07-26 22:21:58,356 | INFO     | mean x: 1753565473.5408163
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | mean y: 2173159.051020408
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | -- intersect: 50946125381.884125
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | intersect: 50946125381.884125
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | chi2: 1.0035615590342641
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | current chi2=1.0035615590342641 (change=76.18784191104547 %)
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | sum of square deviations: 249391183.82795686
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | sum of deviations: -10583044965.913979
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | mean x: 1753565626.0430107
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | mean y: 2180341.9784946237
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | -- intersect: 74415652327.00507
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | intersect: 74415652327.00507
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | chi2: 0.8964623082656307
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | current chi2=0.8964623082656307 (change=10.671916416537117 %)
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | left removable region: 20
[2025-07-26 18:22:37] 2025-07-26 22:21:58,357 | INFO     | sum of square deviations: 141535984.8831167
[2025-07-26 18:22:37] 2025-07-26 22:21:58,358 | INFO     | sum of deviations: -2707914993.441558
[2025-07-26 18:22:37] 2025-07-26 22:21:58,358 | INFO     | mean x: 1753565748.038961
[2025-07-26 18:22:37] 2025-07-26 22:21:58,358 | INFO     | mean y: 2192810.4805194805
[2025-07-26 18:22:37] 2025-07-26 22:21:58,358 | INFO     | -- intersect: 33552013974.488228
[2025-07-26 18:22:37] 2025-07-26 22:21:58,358 | INFO     | intersect: 33552013974.488228
[2025-07-26 18:22:37] 2025-07-26 22:21:58,358 | INFO     | chi2: 0.026830170588122464
[2025-07-26 18:22:37] 2025-07-26 22:21:58,358 | INFO     | -- intersect: 33552013974.488228
[2025-07-26 18:22:37] 2025-07-26 22:21:58,358 | INFO     | current memory leak: -19.13 B/s (using 77 data points, chi2=0.03)
[2025-07-26 18:22:37] 2025-07-26 22:21:58,358 | INFO     | could have reported an average CPU frequency of 3795 MHz (7 samples)
[2025-07-26 18:22:37] 2025-07-26 22:21:58,359 | INFO     | ..............................
[2025-07-26 18:22:37] 2025-07-26 22:21:58,359 | INFO     | . Timing measurements:
[2025-07-26 18:22:37] 2025-07-26 22:21:58,359 | INFO     | . get job = 0 s
[2025-07-26 18:22:37] 2025-07-26 22:21:58,359 | INFO     | . initial setup = 7 s
[2025-07-26 18:22:37] 2025-07-26 22:21:58,359 | INFO     | . payload setup = 56 s
[2025-07-26 18:22:37] 2025-07-26 22:21:58,359 | INFO     | . stage-in = 0 s
[2025-07-26 18:22:37] 2025-07-26 22:21:58,359 | INFO     | . payload execution = 6285 s
[2025-07-26 18:22:37] 2025-07-26 22:21:58,359 | INFO     | . stage-out = 3 s
[2025-07-26 18:22:37] 2025-07-26 22:21:58,359 | INFO     | . log creation = 0 s
[2025-07-26 18:22:37] 2025-07-26 22:21:58,359 | INFO     | ..............................
[2025-07-26 18:22:37] 2025-07-26 22:21:58,422 | INFO     | 
[2025-07-26 18:22:37] 2025-07-26 22:21:58,422 | INFO     | job summary report
[2025-07-26 18:22:37] 2025-07-26 22:21:58,422 | INFO     | --------------------------------------------------
[2025-07-26 18:22:37] 2025-07-26 22:21:58,422 | INFO     | PanDA job id: 6745133898
[2025-07-26 18:22:37] 2025-07-26 22:21:58,422 | INFO     | task id: 45743349
[2025-07-26 18:22:37] 2025-07-26 22:21:58,422 | INFO     | errors: (none)
[2025-07-26 18:22:37] 2025-07-26 22:21:58,422 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | pilot state: finished 
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | transexitcode: 0
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | exeerrorcode: 0
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | exeerrordiag: 
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | exitcode: 0
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | exitmsg: OK
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | cpuconsumptiontime: 27960 s
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | nevents: 400
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | neventsw: 0
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | pid: 892446
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | pgrp: 892446
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | corecount: 8
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | event service: False
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | sizes: {0: 2397248, 1: 2397503, 12: 2397503, 23: 2397531, 34: 2397849, 6345: 2424608, 6346: 2424735, 6350: 2433789, 6353: 2433845, 6393: 2434039}
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | --------------------------------------------------
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | 
[2025-07-26 18:22:37] 2025-07-26 22:21:58,423 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-26 18:22:37] 2025-07-26 22:21:58,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 18:22:37] 2025-07-26 22:21:58,585 | INFO     | job 6745133898 has completed (purged errors)
[2025-07-26 18:22:37] 2025-07-26 22:21:58,585 | INFO     | overall cleanup function is called
[2025-07-26 18:22:37] 2025-07-26 22:21:59,592 | INFO     | --- collectZombieJob: --- 10, [892446]
[2025-07-26 18:22:37] 2025-07-26 22:21:59,592 | INFO     | zombie collector waiting for pid 892446
[2025-07-26 18:22:37] 2025-07-26 22:21:59,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 18:22:37] 2025-07-26 22:21:59,593 | INFO     | collected zombie processes
[2025-07-26 18:22:37] 2025-07-26 22:21:59,593 | INFO     | will attempt to kill all subprocesses of pid=892446
[2025-07-26 18:22:37] 2025-07-26 22:22:01,893 | INFO     | process IDs to be killed: [892446] (in reverse order)
[2025-07-26 18:22:37] 2025-07-26 22:22:02,694 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 18:22:37] 2025-07-26 22:22:02,694 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 18:22:37] 2025-07-26 22:22:02,744 | INFO     | did not find any defunct processes belonging to 892446
[2025-07-26 18:22:37] 2025-07-26 22:22:02,836 | INFO     | did not find any defunct processes belonging to 892446
[2025-07-26 18:22:37] 2025-07-26 22:22:02,861 | INFO     | ready for new job
[2025-07-26 18:22:37] 2025-07-26 22:22:02,861 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 18:22:37] 2025-07-26 22:22:02,863 | INFO     | ***************************************
[2025-07-26 18:22:37] 2025-07-26 22:22:02,863 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 18:22:37] 2025-07-26 22:22:02,863 | INFO     | ***************************************
[2025-07-26 18:22:37] 2025-07-26 22:22:02,863 | INFO     | 
[2025-07-26 18:22:37] 2025-07-26 22:22:02,885 | INFO     | architecture information:
[2025-07-26 18:22:37] 2025-07-26 22:22:02,901 | INFO     | executing command: cat /etc/os-release
[2025-07-26 18:22:37] 2025-07-26 22:22:03,025 | INFO     | cat /etc/os-release:
[2025-07-26 18:22:37] NAME="CentOS Linux"
[2025-07-26 18:22:37] VERSION="7 (Core)"
[2025-07-26 18:22:37] ID="centos"
[2025-07-26 18:22:37] ID_LIKE="rhel fedora"
[2025-07-26 18:22:37] VERSION_ID="7"
[2025-07-26 18:22:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 18:22:37] ANSI_COLOR="0;31"
[2025-07-26 18:22:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 18:22:37] HOME_URL="https://www.centos.org/"
[2025-07-26 18:22:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 18:22:37] 
[2025-07-26 18:22:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 18:22:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 18:22:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 18:22:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 18:22:37] 
[2025-07-26 18:22:37] 2025-07-26 22:22:03,026 | INFO     | ***************************************
[2025-07-26 18:22:37] 2025-07-26 22:22:03,529 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-26 18:22:37] 2025-07-26 22:22:03,596 | INFO     | sufficient remaining disk space (172295716864 B)
[2025-07-26 18:22:37] 2025-07-26 22:22:03,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 18:22:37] 2025-07-26 22:22:03,596 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 18:22:37] 2025-07-26 22:22:03,596 | INFO     | update_server=False
[2025-07-26 18:22:37] 2025-07-26 22:22:03,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 18:22:37] 2025-07-26 22:22:03,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:22:37] 2025-07-26 22:22:03,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 18:22:37] 2025-07-26 22:22:03,601 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 18:22:37] 2025-07-26 22:22:03,601 | INFO     | aborting loop
[2025-07-26 18:22:37] 2025-07-26 22:22:04,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 18:22:37] 2025-07-26 22:22:04,378 | INFO     | all data control threads have been joined
[2025-07-26 18:22:37] 2025-07-26 22:22:04,598 | INFO     | all payload control threads have been joined
[2025-07-26 18:22:37] 2025-07-26 22:22:04,603 | INFO     | [job] retrieve thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:04,608 | INFO     | [job] queue monitor thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:04,607 | INFO     | [job] job monitor thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:04,616 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:04,617 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:04,617 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:04,732 | INFO     | all job control threads have been joined
[2025-07-26 18:22:37] 2025-07-26 22:22:04,856 | INFO     | [payload] validate_post thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:05,193 | INFO     | [job] validate thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:05,384 | INFO     | [data] control thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:05,425 | INFO     | [payload] failed_post thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:05,576 | INFO     | [data] copytool_in thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:05,611 | INFO     | [payload] control thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:05,612 | INFO     | [data] copytool_out thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:05,745 | INFO     | [job] control thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:08,163 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:14,023 | INFO     | job.realtimelogging is not enabled
[2025-07-26 18:22:37] 2025-07-26 22:22:15,029 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 18:22:37] 2025-07-26 22:22:16,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140719638574912)>', '<ExcThread(monitor, started 140719134062336)>']
[2025-07-26 18:22:37] 2025-07-26 22:22:21,034 | INFO     | all workflow threads have been joined
[2025-07-26 18:22:37] 2025-07-26 22:22:21,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 18:22:37] 2025-07-26 22:22:21,035 | INFO     | traces error code: 0
[2025-07-26 18:22:37] 2025-07-26 22:22:21,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 18:22:37] 2025-07-26 22:22:33,930 | INFO     | PID=847696 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 18:22:37] 2025-07-26 22:22:33,932 | INFO     | .. there are 19 such processes running
[2025-07-26 18:22:37] 2025-07-26 22:22:33,945 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 18:22:37] 2025-07-26 22:22:33,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 18:22:37] 2025-07-26 22:22:33,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 18:22:37] 2025-07-26 22:22:33,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 18:22:37] 2025-07-26 22:22:33,946 | INFO     | [monitor] control thread has ended
[2025-07-26 18:22:37] 2025-07-26 22:22:35,415 [wrapper] ==== pilot stdout END ====
[2025-07-26 18:22:37] 2025-07-26 22:22:35,426 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 18:22:37] 2025-07-26 22:22:35,455 [wrapper] pilotpid: 847696
[2025-07-26 18:22:37] 2025-07-26 22:22:35,475 [wrapper] Pilot exit status: 0
[2025-07-26 18:22:37] 2025-07-26 22:22:35,681 [wrapper] pandaids: 6745133898
[2025-07-26 18:22:37] 2025-07-26 22:22:36,200 [wrapper] cleanup supervisor_pilot 2725435 847698
[2025-07-26 18:22:37] 2025-07-26 22:22:36,229 [wrapper] Test setup, not cleaning
[2025-07-26 18:22:37] 2025-07-26 22:22:36,266 [wrapper] apfmon messages muted
[2025-07-26 18:22:37] 2025-07-26 22:22:36,294 [wrapper] ==== wrapper stdout END ====
[2025-07-26 18:22:37] 2025-07-26 22:22:36,332 [wrapper] ==== wrapper stderr END ====
[2025-07-26 18:22:37]  *** Error codes and diagnostics ***
[2025-07-26 18:22:37]     "exeErrorCode": 0,
[2025-07-26 18:22:37]     "exeErrorDiag": "",
[2025-07-26 18:22:37]     "pilotErrorCode": 0,
[2025-07-26 18:22:37]     "pilotErrorDiag": "",
[2025-07-26 18:22:37]  *** Listing of results directory ***
[2025-07-26 18:22:37] total 350912
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 07:03 pilot3.tar.gz
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 07:16 queuedata.json
[2025-07-26 18:22:37] -rwx------. 1 boincer umatlas     36292 Jul 26 07:17 runpilot2-wrapper.sh
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas       100 Jul 26 16:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 18:22:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 16:32 run_atlas
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas       105 Jul 26 16:32 job.xml
[2025-07-26 18:22:37] -rw-r--r--. 2 boincer umatlas 146985673 Jul 26 16:32 EVNT.45743347._002107.pool.root.1
[2025-07-26 18:22:37] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 16:32 shared
[2025-07-26 18:22:37] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 16:32 input.tar.gz
[2025-07-26 18:22:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:32 start_atlas.sh
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas         0 Jul 26 16:32 boinc_lockfile
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 16:33 pandaJob.out
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas    980125 Jul 26 16:34 agis_schedconf.cvmfs.json
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas   1593052 Jul 26 16:34 agis_ddmendpoints.agis.ALL.json
[2025-07-26 18:22:37] drwx------. 4 boincer umatlas      4096 Jul 26 16:34 pilot3
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas      7159 Jul 26 18:10 init_data.xml
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas 206750241 Jul 26 18:20 HITS.45743349._036900.pool.root.1
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas       529 Jul 26 18:20 boinc_task_state.xml
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas      1048 Jul 26 18:21 memory_monitor_summary.json
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas    312823 Jul 26 18:21 log.45743349._036900.job.log.tgz.1
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas      7802 Jul 26 18:21 heartbeat.json
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas        95 Jul 26 18:22 pilot_heartbeat.json
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas       822 Jul 26 18:22 pilotlog.txt
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas    546543 Jul 26 18:22 log.45743349._036900.job.log.1
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 18:22 boinc_mmap_file
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas       357 Jul 26 18:22 output.list
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas        27 Jul 26 18:22 wrapper_checkpoint.txt
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas       620 Jul 26 18:22 runtime_log
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas    880640 Jul 26 18:22 result.tar.gz
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas       656 Jul 26 18:22 rUVKDm34rz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgxRLDmbHsP5m.diag
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 18:22 runtime_log.err
[2025-07-26 18:22:37] -rw-r--r--. 1 boincer umatlas     21296 Jul 26 18:22 stderr.txt
[2025-07-26 18:22:37] HITS file was successfully produced:
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas 206750241 Jul 26 18:20 shared/HITS.pool.root.1
[2025-07-26 18:22:37]  *** Contents of shared directory: ***
[2025-07-26 18:22:37] total 346864
[2025-07-26 18:22:37] -rw-r--r--. 2 boincer umatlas 146985673 Jul 26 16:32 ATLAS.root_0
[2025-07-26 18:22:37] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 16:32 input.tar.gz
[2025-07-26 18:22:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:32 start_atlas.sh
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas 206750241 Jul 26 18:20 HITS.pool.root.1
[2025-07-26 18:22:37] -rw-------. 1 boincer umatlas    880640 Jul 26 18:22 result.tar.gz
18:22:38 (828122): run_atlas exited; CPU time 28151.989151
18:22:38 (828122): called boinc_finish(0)

</stderr_txt>
]]>

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