Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:33:20 (1086573): wrapper (7.7.26015): starting
16:33:20 (1086573): wrapper: running run_atlas (--nthreads 10)
[2025-07-26 16:33:20] Arguments: --nthreads 10
[2025-07-26 16:33:20] Threads: 10
[2025-07-26 16:33:20] Checking for CVMFS
[2025-07-26 16:33:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 16:33:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 16:33:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 16:33:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 16:33:20] 2.13.1.0 128745 4141 97564 148788 2 135 15223532 39288832 7807 16776704 0 3360528 99.545 5678917 45800 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 16:33:20] CVMFS is ok
[2025-07-26 16:33:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 16:33:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 16:33:20] Further information can be found at the LHC@home message board.
[2025-07-26 16:33:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 16:33:20] Checking for apptainer binary...
[2025-07-26 16:33:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 16:33:20] Running /usr/bin/apptainer --version
[2025-07-26 16:33:20] apptainer version 1.4.1-1.el9
[2025-07-26 16:33:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 16:33:21] c-211-4.aglt2.org
[2025-07-26 16:33:21] apptainer works
[2025-07-26 16:33:21] Set ATHENA_PROC_NUMBER=10
[2025-07-26 16:33:21] Set ATHENA_CORE_NUMBER=10
[2025-07-26 16:33:21] Starting ATLAS job with PandaID=6745229868
[2025-07-26 16:33:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:15:29]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:15:29] 2025-07-27 03:14:52,098 | INFO     | PID=1090228 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 23:15:29] 2025-07-27 03:14:52,099 | INFO     | .. there are 6 such processes running
[2025-07-26 23:15:29] 2025-07-27 03:14:54,003 | INFO     | monitor loop #1335: job 0:6745229868 is in state 'finished'
[2025-07-26 23:15:29] 2025-07-27 03:14:54,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 23:15:29] 2025-07-27 03:14:55,428 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 23:15:29] 2025-07-27 03:14:55,445 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.7487000000006
[2025-07-26 23:15:29] 2025-07-27 03:14:55,453 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745229868/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 23:15:29] 2025-07-27 03:14:55,454 | INFO     | extracted standard info from prmon json
[2025-07-26 23:15:29] 2025-07-27 03:14:55,454 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:15:29] 2025-07-27 03:14:55,455 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:15:29] 2025-07-27 03:14:55,455 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:15:29] 2025-07-27 03:14:55,456 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:15:29] 2025-07-27 03:14:55,464 | INFO     | fitting pss+swap vs Time
[2025-07-26 23:15:29] 2025-07-27 03:14:55,465 | INFO     | sum of square deviations: 18965022697.776703
[2025-07-26 23:15:29] 2025-07-27 03:14:55,470 | INFO     | sum of deviations: -69254076027.25378
[2025-07-26 23:15:29] 2025-07-27 03:14:55,470 | INFO     | mean x: 1753574034.3350253
[2025-07-26 23:15:29] 2025-07-27 03:14:55,471 | INFO     | mean y: 2667839.88071066
[2025-07-26 23:15:29] 2025-07-27 03:14:55,471 | INFO     | -- intersect: 6406148153.536903
[2025-07-26 23:15:29] 2025-07-27 03:14:55,471 | INFO     | intersect: 6406148153.536903
[2025-07-26 23:15:29] 2025-07-27 03:14:55,472 | INFO     | chi2: 1.841292190653035
[2025-07-26 23:15:29] 2025-07-27 03:14:55,473 | INFO     | sum of square deviations: 18252207346.74548
[2025-07-26 23:15:29] 2025-07-27 03:14:55,477 | INFO     | sum of deviations: -68494605033.251945
[2025-07-26 23:15:29] 2025-07-27 03:14:55,478 | INFO     | mean x: 1753573881.8457584
[2025-07-26 23:15:29] 2025-07-27 03:14:55,478 | INFO     | mean y: 2668002.3624678664
[2025-07-26 23:15:29] 2025-07-27 03:14:55,478 | INFO     | -- intersect: 6583261141.146216
[2025-07-26 23:15:29] 2025-07-27 03:14:55,478 | INFO     | intersect: 6583261141.146216
[2025-07-26 23:15:29] 2025-07-27 03:14:55,479 | INFO     | chi2: 1.8396027696195916
[2025-07-26 23:15:29] 2025-07-27 03:14:55,479 | INFO     | current chi2=1.8396027696195916 (change=0.09175192519794059 %)
[2025-07-26 23:15:29] 2025-07-27 03:14:55,480 | INFO     | right removable region: 388
[2025-07-26 23:15:29] 2025-07-27 03:14:55,480 | INFO     | sum of square deviations: 18252006656.74548
[2025-07-26 23:15:29] 2025-07-27 03:14:55,485 | INFO     | sum of deviations: -126839827649.16188
[2025-07-26 23:15:29] 2025-07-27 03:14:55,485 | INFO     | mean x: 1753574186.8457584
[2025-07-26 23:15:29] 2025-07-27 03:14:55,486 | INFO     | mean y: 2680077.4473007713
[2025-07-26 23:15:29] 2025-07-27 03:14:55,486 | INFO     | -- intersect: 12188904409.51729
[2025-07-26 23:15:29] 2025-07-27 03:14:55,486 | INFO     | intersect: 12188904409.51729
[2025-07-26 23:15:29] 2025-07-27 03:14:55,487 | INFO     | chi2: 0.5109795703878837
[2025-07-26 23:15:29] 2025-07-27 03:14:55,487 | INFO     | current chi2=0.5109795703878837 (change=72.24886017646884 %)
[2025-07-26 23:15:29] 2025-07-27 03:14:55,488 | INFO     | sum of square deviations: 17557083978.12236
[2025-07-26 23:15:29] 2025-07-27 03:14:55,492 | INFO     | sum of deviations: -122979290620.30994
[2025-07-26 23:15:29] 2025-07-27 03:14:55,493 | INFO     | mean x: 1753574339.3567708
[2025-07-26 23:15:29] 2025-07-27 03:14:55,493 | INFO     | mean y: 2679215.3307291665
[2025-07-26 23:15:29] 2025-07-27 03:14:55,493 | INFO     | -- intersect: 12285660180.324512
[2025-07-26 23:15:29] 2025-07-27 03:14:55,493 | INFO     | intersect: 12285660180.324512
[2025-07-26 23:15:29] 2025-07-27 03:14:55,494 | INFO     | chi2: 0.48980569791645195
[2025-07-26 23:15:29] 2025-07-27 03:14:55,494 | INFO     | current chi2=0.48980569791645195 (change=4.143780632043403 %)
[2025-07-26 23:15:29] 2025-07-27 03:14:55,494 | INFO     | left removable region: 20
[2025-07-26 23:15:29] 2025-07-27 03:14:55,495 | INFO     | sum of square deviations: 15452566582.739206
[2025-07-26 23:15:29] 2025-07-27 03:14:55,499 | INFO     | sum of deviations: -81381143923.4348
[2025-07-26 23:15:29] 2025-07-27 03:14:55,500 | INFO     | mean x: 1753574461.3804348
[2025-07-26 23:15:29] 2025-07-27 03:14:55,500 | INFO     | mean y: 2670184.967391304
[2025-07-26 23:15:29] 2025-07-27 03:14:55,500 | INFO     | -- intersect: 9237893010.764376
[2025-07-26 23:15:29] 2025-07-27 03:14:55,500 | INFO     | intersect: 9237893010.764376
[2025-07-26 23:15:29] 2025-07-27 03:14:55,501 | INFO     | chi2: 0.3888475340652924
[2025-07-26 23:15:29] 2025-07-27 03:14:55,502 | INFO     | -- intersect: 9237893010.764376
[2025-07-26 23:15:29] 2025-07-27 03:14:55,502 | INFO     | current memory leak: -5.27 B/s (using 368 data points, chi2=0.39)
[2025-07-26 23:15:29] 2025-07-27 03:14:55,503 | INFO     | could have reported an average CPU frequency of 2590 MHz (16 samples)
[2025-07-26 23:15:29] 2025-07-27 03:14:55,503 | INFO     | ..............................
[2025-07-26 23:15:29] 2025-07-27 03:14:55,504 | INFO     | . Timing measurements:
[2025-07-26 23:15:29] 2025-07-27 03:14:55,504 | INFO     | . get job = 0 s
[2025-07-26 23:15:29] 2025-07-27 03:14:55,504 | INFO     | . initial setup = 2 s
[2025-07-26 23:15:29] 2025-07-27 03:14:55,504 | INFO     | . payload setup = 8 s
[2025-07-26 23:15:29] 2025-07-27 03:14:55,504 | INFO     | . stage-in = 0 s
[2025-07-26 23:15:29] 2025-07-27 03:14:55,504 | INFO     | . payload execution = 24032 s
[2025-07-26 23:15:29] 2025-07-27 03:14:55,504 | INFO     | . stage-out = 4 s
[2025-07-26 23:15:29] 2025-07-27 03:14:55,504 | INFO     | . log creation = 0 s
[2025-07-26 23:15:29] 2025-07-27 03:14:55,505 | INFO     | ..............................
[2025-07-26 23:15:29] 2025-07-27 03:14:55,636 | INFO     | 
[2025-07-26 23:15:29] 2025-07-27 03:14:55,637 | INFO     | job summary report
[2025-07-26 23:15:29] 2025-07-27 03:14:55,637 | INFO     | --------------------------------------------------
[2025-07-26 23:15:29] 2025-07-27 03:14:55,637 | INFO     | PanDA job id: 6745229868
[2025-07-26 23:15:29] 2025-07-27 03:14:55,638 | INFO     | task id: 45743349
[2025-07-26 23:15:29] 2025-07-27 03:14:55,638 | INFO     | errors: (none)
[2025-07-26 23:15:29] 2025-07-27 03:14:55,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:15:29] 2025-07-27 03:14:55,638 | INFO     | pilot state: finished 
[2025-07-26 23:15:29] 2025-07-27 03:14:55,638 | INFO     | transexitcode: 0
[2025-07-26 23:15:29] 2025-07-27 03:14:55,638 | INFO     | exeerrorcode: 0
[2025-07-26 23:15:29] 2025-07-27 03:14:55,639 | INFO     | exeerrordiag: 
[2025-07-26 23:15:29] 2025-07-27 03:14:55,639 | INFO     | exitcode: 0
[2025-07-26 23:15:29] 2025-07-27 03:14:55,639 | INFO     | exitmsg: OK
[2025-07-26 23:15:29] 2025-07-27 03:14:55,639 | INFO     | cpuconsumptiontime: 60723 s
[2025-07-26 23:15:29] 2025-07-27 03:14:55,639 | INFO     | nevents: 400
[2025-07-26 23:15:29] 2025-07-27 03:14:55,639 | INFO     | neventsw: 0
[2025-07-26 23:15:29] 2025-07-27 03:14:55,639 | INFO     | pid: 1096631
[2025-07-26 23:15:29] 2025-07-27 03:14:55,639 | INFO     | pgrp: 1096631
[2025-07-26 23:15:29] 2025-07-27 03:14:55,640 | INFO     | corecount: 10
[2025-07-26 23:15:29] 2025-07-27 03:14:55,640 | INFO     | event service: False
[2025-07-26 23:15:29] 2025-07-27 03:14:55,640 | INFO     | sizes: {0: 2396641, 1: 2397497, 2: 2397497, 7: 2397787, 12: 2397815, 24044: 2432882, 24050: 2441880, 24051: 2441936, 24063: 2442130}
[2025-07-26 23:15:29] 2025-07-27 03:14:55,640 | INFO     | --------------------------------------------------
[2025-07-26 23:15:29] 2025-07-27 03:14:55,640 | INFO     | 
[2025-07-26 23:15:29] 2025-07-27 03:14:55,640 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 23:15:29] 2025-07-27 03:14:55,695 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:15:29] 2025-07-27 03:14:55,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,698 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:15:29] 2025-07-27 03:14:55,698 | INFO     | job 6745229868 has completed (purged errors)
[2025-07-26 23:15:29] 2025-07-27 03:14:55,698 | INFO     | overall cleanup function is called
[2025-07-26 23:15:29] 2025-07-27 03:14:56,709 | INFO     | --- collectZombieJob: --- 10, [1096631]
[2025-07-26 23:15:29] 2025-07-27 03:14:56,709 | INFO     | zombie collector waiting for pid 1096631
[2025-07-26 23:15:29] 2025-07-27 03:14:56,709 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:15:29] 2025-07-27 03:14:56,709 | INFO     | collected zombie processes
[2025-07-26 23:15:29] 2025-07-27 03:14:56,710 | INFO     | will attempt to kill all subprocesses of pid=1096631
[2025-07-26 23:15:29] 2025-07-27 03:14:57,001 | INFO     | process IDs to be killed: [1096631] (in reverse order)
[2025-07-26 23:15:29] 2025-07-27 03:14:57,077 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:15:29] 2025-07-27 03:14:57,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:15:29] 2025-07-27 03:14:57,095 | INFO     | did not find any defunct processes belonging to 1096631
[2025-07-26 23:15:29] 2025-07-27 03:14:57,121 | INFO     | did not find any defunct processes belonging to 1096631
[2025-07-26 23:15:29] 2025-07-27 03:14:57,121 | INFO     | ready for new job
[2025-07-26 23:15:29] 2025-07-27 03:14:57,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:15:29] 2025-07-27 03:14:57,125 | INFO     | ***************************************
[2025-07-26 23:15:29] 2025-07-27 03:14:57,126 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:15:29] 2025-07-27 03:14:57,126 | INFO     | ***************************************
[2025-07-26 23:15:29] 2025-07-27 03:14:57,126 | INFO     | 
[2025-07-26 23:15:29] 2025-07-27 03:14:57,142 | INFO     | architecture information:
[2025-07-26 23:15:29] 2025-07-27 03:14:57,152 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:15:29] 2025-07-27 03:14:57,265 | INFO     | cat /etc/os-release:
[2025-07-26 23:15:29] NAME="CentOS Linux"
[2025-07-26 23:15:29] VERSION="7 (Core)"
[2025-07-26 23:15:29] ID="centos"
[2025-07-26 23:15:29] ID_LIKE="rhel fedora"
[2025-07-26 23:15:29] VERSION_ID="7"
[2025-07-26 23:15:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:15:29] ANSI_COLOR="0;31"
[2025-07-26 23:15:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:15:29] HOME_URL="https://www.centos.org/"
[2025-07-26 23:15:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:15:29] 
[2025-07-26 23:15:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:15:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:15:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:15:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:15:29] 
[2025-07-26 23:15:29] 2025-07-27 03:14:57,266 | INFO     | ***************************************
[2025-07-26 23:15:29] 2025-07-27 03:14:57,769 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 23:15:29] 2025-07-27 03:14:57,906 | INFO     | sufficient remaining disk space (53993275392 B)
[2025-07-26 23:15:29] 2025-07-27 03:14:57,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:15:29] 2025-07-27 03:14:57,906 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:15:29] 2025-07-27 03:14:57,906 | INFO     | update_server=False
[2025-07-26 23:15:29] 2025-07-27 03:14:57,907 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:15:29] 2025-07-27 03:14:57,907 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:15:29] 2025-07-27 03:14:57,907 | INFO     | aborting loop
[2025-07-26 23:15:29] 2025-07-27 03:14:57,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:15:29] 2025-07-27 03:14:58,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:15:29] 2025-07-27 03:14:58,152 | INFO     | all payload control threads have been joined
[2025-07-26 23:15:29] 2025-07-27 03:14:58,860 | INFO     | all data control threads have been joined
[2025-07-26 23:15:29] 2025-07-27 03:14:58,913 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:14:58,917 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:14:59,158 | INFO     | [payload] control thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:14:59,246 | INFO     | [job] validate thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:14:59,250 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:14:59,500 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:14:59,623 | INFO     | all job control threads have been joined
[2025-07-26 23:15:29] 2025-07-27 03:14:59,747 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:14:59,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:14:59,866 | INFO     | [data] control thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:14:59,915 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:15:00,068 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:15:00,075 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:15:00,118 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:15:00,629 | INFO     | [job] control thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:15:00,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:15:29] 2025-07-27 03:15:01,658 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:15:02,029 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:15:29] 2025-07-27 03:15:02,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497451571008)>', '<ExcThread(monitor, started 140496802395904)>']
[2025-07-26 23:15:29] 2025-07-27 03:15:07,556 | INFO     | all workflow threads have been joined
[2025-07-26 23:15:29] 2025-07-27 03:15:07,556 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:15:29] 2025-07-27 03:15:07,557 | INFO     | traces error code: 0
[2025-07-26 23:15:29] 2025-07-27 03:15:07,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:15:29] 2025-07-27 03:15:28,967 | INFO     | PID=1090228 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 23:15:29] 2025-07-27 03:15:28,967 | INFO     | .. there are 6 such processes running
[2025-07-26 23:15:29] 2025-07-27 03:15:28,968 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:15:29] 2025-07-27 03:15:28,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:15:29] 2025-07-27 03:15:28,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:15:29] 2025-07-27 03:15:28,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:15:29] 2025-07-27 03:15:28,969 | INFO     | [monitor] control thread has ended
[2025-07-26 23:15:29] 2025-07-27 03:15:29,422 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:15:29] 2025-07-27 03:15:29,426 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:15:29] 2025-07-27 03:15:29,430 [wrapper] pilotpid: 1090228
[2025-07-26 23:15:29] 2025-07-27 03:15:29,434 [wrapper] Pilot exit status: 0
[2025-07-26 23:15:29] 2025-07-27 03:15:29,465 [wrapper] pandaids: 6745229868
[2025-07-26 23:15:29] 2025-07-27 03:15:29,520 [wrapper] cleanup supervisor_pilot 1543840 1090229
[2025-07-26 23:15:29] 2025-07-27 03:15:29,526 [wrapper] Test setup, not cleaning
[2025-07-26 23:15:29] 2025-07-27 03:15:29,533 [wrapper] apfmon messages muted
[2025-07-26 23:15:29] 2025-07-27 03:15:29,537 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:15:29] 2025-07-27 03:15:29,542 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:15:29]  *** Error codes and diagnostics ***
[2025-07-26 23:15:29]     "exeErrorCode": 0,
[2025-07-26 23:15:29]     "exeErrorDiag": "",
[2025-07-26 23:15:29]     "pilotErrorCode": 0,
[2025-07-26 23:15:29]     "pilotErrorDiag": "",
[2025-07-26 23:15:29]  *** Listing of results directory ***
[2025-07-26 23:15:29] total 354396
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas    550332 Jun 18 11:33 pilot3.tar.gz
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 11:00 queuedata.json
[2025-07-26 23:15:29] -rwx------. 1 boincer umatlas     36292 Jul 26 11:01 runpilot2-wrapper.sh
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas       100 Jul 26 16:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:15:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 16:33 run_atlas
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas       105 Jul 26 16:33 job.xml
[2025-07-26 23:15:29] -rw-r--r--. 2 boincer umatlas 148998353 Jul 26 16:33 EVNT.45743347._002266.pool.root.1
[2025-07-26 23:15:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:33 start_atlas.sh
[2025-07-26 23:15:29] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 16:33 shared
[2025-07-26 23:15:29] -rw-r--r--. 2 boincer umatlas    564545 Jul 26 16:33 input.tar.gz
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas         0 Jul 26 16:33 boinc_lockfile
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas      2560 Jul 26 16:33 pandaJob.out
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas    980125 Jul 26 16:33 agis_schedconf.cvmfs.json
[2025-07-26 23:15:29] drwx------. 6 boincer umatlas      4096 Jul 26 16:33 pilot3
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas      6657 Jul 26 23:09 init_data.xml
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas 205354146 Jul 26 23:13 HITS.45743349._039776.pool.root.1
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas       531 Jul 26 23:13 boinc_task_state.xml
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas      1039 Jul 26 23:14 memory_monitor_summary.json
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas   1593052 Jul 26 23:14 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas    478305 Jul 26 23:14 log.45743349._039776.job.log.tgz.1
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas      7811 Jul 26 23:14 heartbeat.json
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas        28 Jul 26 23:15 wrapper_checkpoint.txt
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 23:15 boinc_mmap_file
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas        95 Jul 26 23:15 pilot_heartbeat.json
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas       822 Jul 26 23:15 pilotlog.txt
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas   1836036 Jul 26 23:15 log.45743349._039776.job.log.1
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas       357 Jul 26 23:15 output.list
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas       620 Jul 26 23:15 runtime_log
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas   2334720 Jul 26 23:15 result.tar.gz
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas      8658 Jul 26 23:15 runtime_log.err
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas       656 Jul 26 23:15 64mNDmQavz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjx0KDmhm9Vim.diag
[2025-07-26 23:15:29] -rw-r--r--. 1 boincer umatlas     21324 Jul 26 23:15 stderr.txt
[2025-07-26 23:15:29] HITS file was successfully produced:
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas 205354146 Jul 26 23:13 shared/HITS.pool.root.1
[2025-07-26 23:15:29]  *** Contents of shared directory: ***
[2025-07-26 23:15:29] total 348908
[2025-07-26 23:15:29] -rw-r--r--. 2 boincer umatlas 148998353 Jul 26 16:33 ATLAS.root_0
[2025-07-26 23:15:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:33 start_atlas.sh
[2025-07-26 23:15:29] -rw-r--r--. 2 boincer umatlas    564545 Jul 26 16:33 input.tar.gz
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas 205354146 Jul 26 23:13 HITS.pool.root.1
[2025-07-26 23:15:29] -rw-------. 1 boincer umatlas   2334720 Jul 26 23:15 result.tar.gz
23:15:31 (1086573): run_atlas exited; CPU time 61291.628307
23:15:31 (1086573): called boinc_finish(0)

</stderr_txt>
]]>

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