Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:28:22 (2269238): wrapper (7.7.26015): starting
16:28:22 (2269238): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 16:28:22] Arguments: --nthreads 8
[2025-07-26 16:28:22] Threads: 8
[2025-07-26 16:28:22] Checking for CVMFS
[2025-07-26 16:28:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 16:28:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 16:28:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 16:28:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 16:28:23] 2.13.1.0 116762 7433 204288 148788 0 188 34612320 40960001 13696 16776704 0 100762887 99.999 294537 37170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 16:28:23] CVMFS is ok
[2025-07-26 16:28:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 16:28:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 16:28:23] Further information can be found at the LHC@home message board.
[2025-07-26 16:28:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 16:28:23] Checking for apptainer binary...
[2025-07-26 16:28:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 16:28:23] Running /usr/bin/apptainer --version
[2025-07-26 16:28:23] apptainer version 1.4.1-1.el9
[2025-07-26 16:28:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 16:28:23] c-208-39.aglt2.org
[2025-07-26 16:28:23] apptainer works
[2025-07-26 16:28:23] Set ATHENA_PROC_NUMBER=8
[2025-07-26 16:28:23] Set ATHENA_CORE_NUMBER=8
[2025-07-26 16:28:23] Starting ATLAS job with PandaID=6745135859
[2025-07-26 16:28:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 17:25:36]  *** The last 200 lines of the pilot log: ***
[2025-07-26 17:25:36]  protocol_id=None
[2025-07-26 17:25:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 17:25:36]  replicas=None
[2025-07-26 17:25:36]  scope=mc23_13p6TeV
[2025-07-26 17:25:36]  status=None
[2025-07-26 17:25:36]  status_code=0
[2025-07-26 17:25:36]  storage_token=
[2025-07-26 17:25:36]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6745135859/log.45743349._037444.job.log.tgz.1
[2025-07-26 17:25:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/ec/log.45743349._037444.job.log.tgz.1
[2025-07-26 17:25:36]  workdir=None
[2025-07-26 17:25:36] ]
[2025-07-26 17:25:36] 2025-07-26 21:24:56,983 | INFO     | transferring file log.45743349._037444.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6745135859/log.45743349._037444.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 17:25:36] 2025-07-26 21:24:56,983 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6745135859/log.45743349._037444.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._037444.job
[2025-07-26 17:25:36] 2025-07-26 21:24:57,004 | INFO     | adding to output.list: log.45743349._037444.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/ec/log.45743349._037444.job.log.tg
[2025-07-26 17:25:36] 2025-07-26 21:24:57,005 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 17:25:36] 2025-07-26 21:24:57,005 | INFO     | summary of transferred files:
[2025-07-26 17:25:36] 2025-07-26 21:24:57,005 | INFO     |  -- lfn=log.45743349._037444.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 17:25:36] 2025-07-26 21:24:57,005 | INFO     | stage-out finished correctly
[2025-07-26 17:25:36] 2025-07-26 21:24:57,507 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 17:25:36] 2025-07-26 21:24:59,418 | INFO     | monitor loop #250: job 0:6745135859 is in state 'finished'
[2025-07-26 17:25:36] 2025-07-26 21:24:59,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 17:25:36] 2025-07-26 21:24:59,764 | INFO     | PID=2272841 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 17:25:36] 2025-07-26 21:24:59,764 | INFO     | .. there are 16 such processes running
[2025-07-26 17:25:36] 2025-07-26 21:25:00,497 | INFO     | job 6745135859 has state=finished
[2025-07-26 17:25:36] 2025-07-26 21:25:00,497 | INFO     | preparing for final server update for job 6745135859 in state='finished'
[2025-07-26 17:25:36] 2025-07-26 21:25:00,497 | INFO     | this job has now completed (state=finished)
[2025-07-26 17:25:36] 2025-07-26 21:25:00,497 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 17:25:36] 2025-07-26 21:25:00,497 | INFO     | log transfer has been attempted: DONE
[2025-07-26 17:25:36] 2025-07-26 21:25:00,497 | INFO     | job 6745135859 has finished - writing final server update
[2025-07-26 17:25:36] 2025-07-26 21:25:00,498 | INFO     | total number of processed events: 400 (read)
[2025-07-26 17:25:36] 2025-07-26 21:25:00,499 | INFO     | executing command: lscpu
[2025-07-26 17:25:36] 2025-07-26 21:25:00,555 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 17:25:36] 2025-07-26 21:25:01,922 | INFO     | monitor loop #251: job 0:6745135859 is in state 'finished'
[2025-07-26 17:25:36] 2025-07-26 21:25:01,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 17:25:36] 2025-07-26 21:25:04,235 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 17:25:36] 2025-07-26 21:25:04,240 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3778.595695312501
[2025-07-26 17:25:36] 2025-07-26 21:25:04,254 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745135859/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 17:25:36] 2025-07-26 21:25:04,254 | INFO     | extracted standard info from prmon json
[2025-07-26 17:25:36] 2025-07-26 21:25:04,255 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 17:25:36] 2025-07-26 21:25:04,255 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 17:25:36] 2025-07-26 21:25:04,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 17:25:36] 2025-07-26 21:25:04,255 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 17:25:36] 2025-07-26 21:25:04,256 | INFO     | fitting pss+swap vs Time
[2025-07-26 17:25:36] 2025-07-26 21:25:04,256 | INFO     | sum of square deviations: 34277852.0
[2025-07-26 17:25:36] 2025-07-26 21:25:04,257 | INFO     | sum of deviations: -546179878.5000002
[2025-07-26 17:25:36] 2025-07-26 21:25:04,257 | INFO     | mean x: 1753563476.5
[2025-07-26 17:25:36] 2025-07-26 21:25:04,257 | INFO     | mean y: 2559273.6458333335
[2025-07-26 17:25:36] 2025-07-26 21:25:04,257 | INFO     | -- intersect: 27943664992.19576
[2025-07-26 17:25:36] 2025-07-26 21:25:04,257 | INFO     | intersect: 27943664992.19576
[2025-07-26 17:25:36] 2025-07-26 21:25:04,257 | INFO     | chi2: 0.0004361886266875155
[2025-07-26 17:25:36] 2025-07-26 21:25:04,257 | INFO     | -- intersect: 27943664992.19576
[2025-07-26 17:25:36] 2025-07-26 21:25:04,257 | INFO     | current memory leak: -15.93 B/s (using 48 data points, chi2=0.00)
[2025-07-26 17:25:36] 2025-07-26 21:25:04,257 | INFO     | could have reported an average CPU frequency of 3784 MHz (5 samples)
[2025-07-26 17:25:36] 2025-07-26 21:25:04,258 | INFO     | ..............................
[2025-07-26 17:25:36] 2025-07-26 21:25:04,258 | INFO     | . Timing measurements:
[2025-07-26 17:25:36] 2025-07-26 21:25:04,258 | INFO     | . get job = 0 s
[2025-07-26 17:25:36] 2025-07-26 21:25:04,258 | INFO     | . initial setup = 2 s
[2025-07-26 17:25:36] 2025-07-26 21:25:04,258 | INFO     | . payload setup = 5 s
[2025-07-26 17:25:36] 2025-07-26 21:25:04,258 | INFO     | . stage-in = 0 s
[2025-07-26 17:25:36] 2025-07-26 21:25:04,258 | INFO     | . payload execution = 3359 s
[2025-07-26 17:25:36] 2025-07-26 21:25:04,258 | INFO     | . stage-out = 0 s
[2025-07-26 17:25:36] 2025-07-26 21:25:04,258 | INFO     | . log creation = 0 s
[2025-07-26 17:25:36] 2025-07-26 21:25:04,258 | INFO     | ..............................
[2025-07-26 17:25:36] 2025-07-26 21:25:04,742 | INFO     | 
[2025-07-26 17:25:36] 2025-07-26 21:25:04,742 | INFO     | job summary report
[2025-07-26 17:25:36] 2025-07-26 21:25:04,742 | INFO     | --------------------------------------------------
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | PanDA job id: 6745135859
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | task id: 45743349
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | errors: (none)
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | pilot state: finished 
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | transexitcode: 0
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | exeerrorcode: 0
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | exeerrordiag: 
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | exitcode: 0
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | exitmsg: OK
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | cpuconsumptiontime: 24597 s
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | nevents: 400
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | neventsw: 0
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | pid: 2279363
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | pgrp: 2279363
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | corecount: 8
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | event service: False
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | sizes: {0: 2397475, 4: 2397737, 11: 2397765, 3368: 2423442, 3369: 2432495, 3370: 2432495, 3376: 2432849}
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | --------------------------------------------------
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | 
[2025-07-26 17:25:36] 2025-07-26 21:25:04,743 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 17:25:36] 2025-07-26 21:25:04,764 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,765 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | job 6745135859 has completed (purged errors)
[2025-07-26 17:25:36] 2025-07-26 21:25:04,766 | INFO     | overall cleanup function is called
[2025-07-26 17:25:36] 2025-07-26 21:25:05,773 | INFO     | --- collectZombieJob: --- 10, [2279363]
[2025-07-26 17:25:36] 2025-07-26 21:25:05,773 | INFO     | zombie collector waiting for pid 2279363
[2025-07-26 17:25:36] 2025-07-26 21:25:05,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 17:25:36] 2025-07-26 21:25:05,773 | INFO     | collected zombie processes
[2025-07-26 17:25:36] 2025-07-26 21:25:05,774 | INFO     | will attempt to kill all subprocesses of pid=2279363
[2025-07-26 17:25:36] 2025-07-26 21:25:06,143 | INFO     | process IDs to be killed: [2279363] (in reverse order)
[2025-07-26 17:25:36] 2025-07-26 21:25:06,270 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 17:25:36] 2025-07-26 21:25:06,271 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 17:25:36] 2025-07-26 21:25:06,288 | INFO     | did not find any defunct processes belonging to 2279363
[2025-07-26 17:25:36] 2025-07-26 21:25:06,302 | INFO     | did not find any defunct processes belonging to 2279363
[2025-07-26 17:25:36] 2025-07-26 21:25:06,302 | INFO     | ready for new job
[2025-07-26 17:25:36] 2025-07-26 21:25:06,302 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 17:25:36] 2025-07-26 21:25:06,304 | INFO     | ***************************************
[2025-07-26 17:25:36] 2025-07-26 21:25:06,304 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 17:25:36] 2025-07-26 21:25:06,304 | INFO     | ***************************************
[2025-07-26 17:25:36] 2025-07-26 21:25:06,304 | INFO     | 
[2025-07-26 17:25:36] 2025-07-26 21:25:06,309 | INFO     | architecture information:
[2025-07-26 17:25:36] 2025-07-26 21:25:06,309 | INFO     | executing command: cat /etc/os-release
[2025-07-26 17:25:36] 2025-07-26 21:25:06,324 | INFO     | cat /etc/os-release:
[2025-07-26 17:25:36] NAME="CentOS Linux"
[2025-07-26 17:25:36] VERSION="7 (Core)"
[2025-07-26 17:25:36] ID="centos"
[2025-07-26 17:25:36] ID_LIKE="rhel fedora"
[2025-07-26 17:25:36] VERSION_ID="7"
[2025-07-26 17:25:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 17:25:36] ANSI_COLOR="0;31"
[2025-07-26 17:25:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 17:25:36] HOME_URL="https://www.centos.org/"
[2025-07-26 17:25:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 17:25:36] 
[2025-07-26 17:25:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 17:25:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 17:25:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 17:25:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 17:25:36] 
[2025-07-26 17:25:36] 2025-07-26 21:25:06,325 | INFO     | ***************************************
[2025-07-26 17:25:36] 2025-07-26 21:25:06,827 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 17:25:36] 2025-07-26 21:25:06,846 | INFO     | sufficient remaining disk space (166787547136 B)
[2025-07-26 17:25:36] 2025-07-26 21:25:06,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 17:25:36] 2025-07-26 21:25:06,847 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 17:25:36] 2025-07-26 21:25:06,847 | INFO     | update_server=False
[2025-07-26 17:25:36] 2025-07-26 21:25:06,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 17:25:36] 2025-07-26 21:25:06,926 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 17:25:36] 2025-07-26 21:25:06,927 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 17:25:36] 2025-07-26 21:25:06,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 17:25:36] 2025-07-26 21:25:06,927 | INFO     | will abort loop
[2025-07-26 17:25:36] 2025-07-26 21:25:07,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 17:25:36] 2025-07-26 21:25:07,643 | INFO     | all data control threads have been joined
[2025-07-26 17:25:36] 2025-07-26 21:25:07,810 | INFO     | all payload control threads have been joined
[2025-07-26 17:25:36] 2025-07-26 21:25:07,851 | INFO     | [job] retrieve thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:07,930 | INFO     | [job] job monitor thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:08,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 17:25:36] 2025-07-26 21:25:08,108 | INFO     | [payload] failed_post thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:08,401 | INFO     | all job control threads have been joined
[2025-07-26 17:25:36] 2025-07-26 21:25:08,648 | INFO     | [data] control thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:08,659 | INFO     | [payload] validate_post thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:08,685 | INFO     | [data] copytool_in thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:08,815 | INFO     | [payload] control thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:08,946 | INFO     | [job] validate thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:08,995 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:09,087 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:09,219 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:09,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 17:25:36] 2025-07-26 21:25:09,404 | INFO     | [job] control thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:09,587 | INFO     | [data] copytool_out thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:10,334 | INFO     | [job] queue monitor thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:12,083 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:17,355 | INFO     | job.realtimelogging is not enabled
[2025-07-26 17:25:36] 2025-07-26 21:25:18,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 17:25:36] 2025-07-26 21:25:19,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457817134912)>', '<ExcThread(monitor, started 140457090733824)>']
[2025-07-26 17:25:36] 2025-07-26 21:25:24,101 | INFO     | all workflow threads have been joined
[2025-07-26 17:25:36] 2025-07-26 21:25:24,101 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 17:25:36] 2025-07-26 21:25:24,101 | INFO     | traces error code: 0
[2025-07-26 17:25:36] 2025-07-26 21:25:24,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 17:25:36] 2025-07-26 21:25:36,294 | INFO     | PID=2272841 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 17:25:36] 2025-07-26 21:25:36,295 | INFO     | .. there are 16 such processes running
[2025-07-26 17:25:36] 2025-07-26 21:25:36,295 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 17:25:36] 2025-07-26 21:25:36,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 17:25:36] 2025-07-26 21:25:36,295 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 17:25:36] 2025-07-26 21:25:36,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 17:25:36] 2025-07-26 21:25:36,295 | INFO     | [monitor] control thread has ended
[2025-07-26 17:25:36] 2025-07-26 21:25:36,423 [wrapper] ==== pilot stdout END ====
[2025-07-26 17:25:36] 2025-07-26 21:25:36,426 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 17:25:36] 2025-07-26 21:25:36,428 [wrapper] pilotpid: 2272841
[2025-07-26 17:25:36] 2025-07-26 21:25:36,431 [wrapper] Pilot exit status: 0
[2025-07-26 17:25:36] 2025-07-26 21:25:36,440 [wrapper] pandaids: 6745135859
[2025-07-26 17:25:36] 2025-07-26 21:25:36,525 [wrapper] cleanup supervisor_pilot 2541989 2272842
[2025-07-26 17:25:36] 2025-07-26 21:25:36,528 [wrapper] Test setup, not cleaning
[2025-07-26 17:25:36] 2025-07-26 21:25:36,531 [wrapper] apfmon messages muted
[2025-07-26 17:25:36] 2025-07-26 21:25:36,534 [wrapper] ==== wrapper stdout END ====
[2025-07-26 17:25:36] 2025-07-26 21:25:36,537 [wrapper] ==== wrapper stderr END ====
[2025-07-26 17:25:36]  *** Error codes and diagnostics ***
[2025-07-26 17:25:36]     "exeErrorCode": 0,
[2025-07-26 17:25:36]     "exeErrorDiag": "",
[2025-07-26 17:25:36]     "pilotErrorCode": 0,
[2025-07-26 17:25:36]     "pilotErrorDiag": "",
[2025-07-26 17:25:36]  *** Listing of results directory ***
[2025-07-26 17:25:36] total 352640
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 07:39 pilot3.tar.gz
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 07:58 queuedata.json
[2025-07-26 17:25:36] -rwx------. 1 boincer umatlas     36292 Jul 26 07:58 runpilot2-wrapper.sh
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas       100 Jul 26 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 17:25:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 16:28 run_atlas
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas       105 Jul 26 16:28 job.xml
[2025-07-26 17:25:36] -rw-r--r--. 2 boincer umatlas 145584112 Jul 26 16:28 EVNT.45743347._002140.pool.root.1
[2025-07-26 17:25:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:28 start_atlas.sh
[2025-07-26 17:25:36] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 16:28 shared
[2025-07-26 17:25:36] -rw-r--r--. 2 boincer umatlas    542898 Jul 26 16:28 input.tar.gz
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas         0 Jul 26 16:28 boinc_lockfile
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 16:28 pandaJob.out
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas    980125 Jul 26 16:28 agis_schedconf.cvmfs.json
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas   1593052 Jul 26 16:28 agis_ddmendpoints.agis.ALL.json
[2025-07-26 17:25:36] drwx------. 4 boincer umatlas      4096 Jul 26 16:28 pilot3
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas      7174 Jul 26 17:22 init_data.xml
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas       529 Jul 26 17:24 boinc_task_state.xml
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas 210382759 Jul 26 17:24 HITS.45743349._037444.pool.root.1
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas        95 Jul 26 17:24 pilot_heartbeat.json
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas      1027 Jul 26 17:24 memory_monitor_summary.json
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas    286038 Jul 26 17:24 log.45743349._037444.job.log.tgz.1
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas      7764 Jul 26 17:25 heartbeat.json
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 17:25 boinc_mmap_file
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas        27 Jul 26 17:25 wrapper_checkpoint.txt
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas       823 Jul 26 17:25 pilotlog.txt
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas    348044 Jul 26 17:25 log.45743349._037444.job.log.1
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas       357 Jul 26 17:25 output.list
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas       620 Jul 26 17:25 runtime_log
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas    655360 Jul 26 17:25 result.tar.gz
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 17:25 runtime_log.err
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas       651 Jul 26 17:25 ABOKDmsisz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm52RLDm19HHan.diag
[2025-07-26 17:25:36] -rw-r--r--. 1 boincer umatlas     21859 Jul 26 17:25 stderr.txt
[2025-07-26 17:25:36] HITS file was successfully produced:
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas 210382759 Jul 26 17:24 shared/HITS.pool.root.1
[2025-07-26 17:25:36]  *** Contents of shared directory: ***
[2025-07-26 17:25:36] total 348816
[2025-07-26 17:25:36] -rw-r--r--. 2 boincer umatlas 145584112 Jul 26 16:28 ATLAS.root_0
[2025-07-26 17:25:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 16:28 start_atlas.sh
[2025-07-26 17:25:36] -rw-r--r--. 2 boincer umatlas    542898 Jul 26 16:28 input.tar.gz
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas 210382759 Jul 26 17:24 HITS.pool.root.1
[2025-07-26 17:25:36] -rw-------. 1 boincer umatlas    655360 Jul 26 17:25 result.tar.gz
17:25:38 (2269238): run_atlas exited; CPU time 24686.393596
17:25:38 (2269238): called boinc_finish(0)

</stderr_txt>
]]>

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