Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-27 00:57:05 (8368): Detected: vboxwrapper 26206
2025-07-27 00:57:05 (8368): Detected: BOINC client v7.16.11
2025-07-27 00:57:06 (8368): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-07-27 00:57:06 (8368): Successfully copied 'init_data.xml' to the shared directory.
2025-07-27 00:57:06 (8368): Create VM. (boinc_02e7d7d29339fbef, slot#3)
2025-07-27 00:57:07 (8368): Setting Memory Size for VM. (4300MB)
2025-07-27 00:57:07 (8368): Setting CPU Count for VM. (3)
2025-07-27 00:57:07 (8368): Setting Chipset Options for VM.
2025-07-27 00:57:08 (8368): Setting Graphics Controller Options for VM.
2025-07-27 00:57:08 (8368): Setting Boot Options for VM.
2025-07-27 00:57:08 (8368): Setting Network Configuration for NAT.
2025-07-27 00:57:09 (8368): Enabling VM Network Access.
2025-07-27 00:57:09 (8368): Disabling USB Support for VM.
2025-07-27 00:57:09 (8368): Disabling COM Port Support for VM.
2025-07-27 00:57:09 (8368): Disabling LPT Port Support for VM.
2025-07-27 00:57:10 (8368): Disabling Audio Support for VM.
2025-07-27 00:57:10 (8368): Disabling Clipboard Support for VM.
2025-07-27 00:57:10 (8368): Disabling Drag and Drop Support for VM.
2025-07-27 00:57:10 (8368): Adding storage controller(s) to VM.
2025-07-27 00:57:11 (8368): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-27 00:57:12 (8368): Adding VirtualBox Guest Additions to VM.
2025-07-27 00:57:12 (8368): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-27 00:57:12 (8368): forwarding host port 56830 to guest port 80
2025-07-27 00:57:13 (8368): Enabling remote desktop for VM.
2025-07-27 00:57:13 (8368): Required extension pack not installed, remote desktop not enabled.
2025-07-27 00:57:13 (8368): Enabling shared directory for VM.
2025-07-27 00:57:13 (8368): Starting VM using VBoxManage interface. (boinc_02e7d7d29339fbef, slot#3)
2025-07-27 00:57:17 (8368): Successfully started VM. (PID = '10056')
2025-07-27 00:57:17 (8368): Reporting VM Process ID to BOINC.
2025-07-27 00:57:17 (8368): Guest Log: BIOS: VirtualBox 6.1.12
2025-07-27 00:57:17 (8368): Guest Log: CPUID EDX: 0x178bfbff
2025-07-27 00:57:17 (8368): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-27 00:57:17 (8368): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-27 00:57:17 (8368): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-27 00:57:17 (8368): Detected: Web Application Enabled (http://localhost:56830)
2025-07-27 00:57:17 (8368): Preference change detected
2025-07-27 00:57:17 (8368): Setting CPU throttle for VM. (100%)
2025-07-27 00:57:17 (8368): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-27 00:57:19 (8368): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-27 00:57:19 (8368): Guest Log: BIOS: Booting from Hard Disk...
2025-07-27 00:57:22 (8368): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-27 00:57:22 (8368): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-27 00:57:22 (8368): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-27 00:57:27 (8368): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-27 00:57:27 (8368): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-27 00:57:32 (8368): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-27 00:57:32 (8368): Guest Log: 00:00:00.000144 main     Log opened 2025-07-27T00:57:29.660637000Z
2025-07-27 00:57:32 (8368): Guest Log: 00:00:00.000243 main     OS Product: Linux
2025-07-27 00:57:32 (8368): Guest Log: 00:00:00.000264 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-27 00:57:32 (8368): Guest Log: 00:00:00.000281 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-27 00:57:32 (8368): Guest Log: 00:00:00.000298 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-27 00:57:32 (8368): Guest Log: 00:00:00.000299 main     Process ID: 1282
2025-07-27 00:57:32 (8368): Guest Log: 00:00:00.000299 main     Package type: LINUX_64BITS_GENERIC
2025-07-27 00:57:32 (8368): Guest Log: 00:00:00.000905 main     5.2.32 r132073 started. Verbose level = 0
2025-07-27 00:57:32 (8368): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-27 00:57:32 (8368): Guest Log: [INFO] Mounting shared directory
2025-07-27 00:57:32 (8368): Guest Log: [INFO] Checking for init_data.xml
2025-07-27 00:57:37 (8368): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-27 00:57:37 (8368): Guest Log: [INFO] Detected branch: prod
2025-07-27 00:57:37 (8368): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-27 00:57:37 (8368): Guest Log: Copying input files
2025-07-27 00:57:38 (8368): Guest Log: Copied input files into RunAtlas.
2025-07-27 00:57:38 (8368): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-27 00:57:38 (8368): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-27 00:57:38 (8368): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-27 00:57:38 (8368): Guest Log: Further information can be found at the LHC@home message board.
2025-07-27 00:57:42 (8368): Guest Log: 00:00:10.003104 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 511 471 000ns (GuestNow=1 753 570 661 151 036 000 ns GuestLast=1 753 577 849 662 507 000 ns fSetTimeLastLoop=true )
2025-07-27 00:57:50 (8368): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-27 00:57:50 (8368): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-27 00:57:50 (8368): Guest Log: 2.6.3.0 1557 0 32212 148792 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-27 00:57:51 (8368): Guest Log: copied the webapp to /var/www
2025-07-27 00:57:51 (8368): Guest Log: ATHENA_PROC_NUMBER=3
2025-07-27 00:57:51 (8368): Guest Log: ATHENA_CORE_NUMBER=3
2025-07-27 00:57:51 (8368): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-27 00:57:51 (8368): Guest Log:  *** Starting ATLAS job. (PandaID=6745101996 taskID=45743349) ***
2025-07-27 02:37:53 (8368): Status Report: Elapsed Time: '6000.000000'
2025-07-27 02:37:53 (8368): Status Report: CPU Time: '16802.937500'
2025-07-27 04:18:33 (8368): Status Report: Elapsed Time: '12000.000000'
2025-07-27 04:18:33 (8368): Status Report: CPU Time: '34891.218750'
2025-07-27 04:46:54 (8368): Guest Log:  *** Job finished ***
2025-07-27 04:46:54 (8368): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:40,147 | INFO     | [data] control thread has finished
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:40,637 | INFO     | [data] copytool_out thread has finished
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:42,354 | INFO     | [data] queue_monitor thread has finished
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:42,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140053794121536)>', '<ExcThread(monitor, started 140053347022592)>']
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:42,373 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:42,374 | INFO     | [monitor] control thread has ended
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,401 | INFO     | all workflow threads have been joined
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,401 | INFO     | end of generic workflow (traces error code: 0)
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,401 | INFO     | traces error code: 0
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,504 [wrapper] ==== pilot stdout END ====
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,509 [wrapper] ==== wrapper stdout RESUME ====
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,513 [wrapper] pilotpid: 5866
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,517 [wrapper] Pilot exit status: 0
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,769 [wrapper] pandaids: 6745101996
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,799 [wrapper] cleanup supervisor_pilot 14793 5867
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,803 [wrapper] Test setup, not cleaning
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,808 [wrapper] apfmon messages muted
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,812 [wrapper] ==== wrapper stdout END ====
2025-07-27 04:46:54 (8368): Guest Log: 2025-07-27 02:46:47,816 [wrapper] ==== wrapper stderr END ====
2025-07-27 04:46:54 (8368): Guest Log:  *** Error codes and diagnostics ***
2025-07-27 04:46:54 (8368): Guest Log:     "exeErrorCode": 0,
2025-07-27 04:46:54 (8368): Guest Log:     "exeErrorDiag": "",
2025-07-27 04:46:54 (8368): Guest Log:     "pilotErrorCode": 0,
2025-07-27 04:46:54 (8368): Guest Log:     "pilotErrorDiag": "",
2025-07-27 04:46:54 (8368): Guest Log:  *** Listing of results directory ***
2025-07-27 04:46:54 (8368): Guest Log: total 212700
2025-07-27 04:46:54 (8368): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 26 08:27 pilot3.tar.gz
2025-07-27 04:46:54 (8368): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 26 08:54 runpilot2-wrapper.sh
2025-07-27 04:46:54 (8368): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 26 08:54 queuedata.json
2025-07-27 04:46:54 (8368): Guest Log: -rwxr-xr-x. 1 atlas atlas      8838 Jul 26 22:57 init_data.xml
2025-07-27 04:46:54 (8368): Guest Log: -rwxr-xr-x. 1 atlas atlas    542884 Jul 26 22:57 input.tar.gz
2025-07-27 04:46:54 (8368): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 26 22:57 start_atlas.sh
2025-07-27 04:46:54 (8368): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 26 22:57 EVNT.45743347._002006.pool.root.1 -> /data/./ATLAS.root_0
2025-07-27 04:46:54 (8368): Guest Log: -rw-r--r--. 1 atlas atlas      2562 Jul 26 22:57 pandaJob.out
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas    980125 Jul 26 22:59 agis_schedconf.cvmfs.json
2025-07-27 04:46:54 (8368): Guest Log: drwx------. 4 atlas atlas      4096 Jul 26 22:59 pilot3
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas 210987714 Jul 27 02:45 HITS.45743349._035294.pool.root.1
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas      1030 Jul 27 02:46 memory_monitor_summary.json
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 27 02:46 agis_ddmendpoints.agis.ALL.json
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas    302644 Jul 27 02:46 log.45743349._035294.job.log.tgz.1
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas        95 Jul 27 02:46 pilot_heartbeat.json
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas      7816 Jul 27 02:46 heartbeat.json
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas      4540 Jul 27 02:46 pilotlog.txt
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas   1199975 Jul 27 02:46 log.45743349._035294.job.log.1
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas       357 Jul 27 02:46 output.list
2025-07-27 04:46:54 (8368): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 27 02:46 runtime_log
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas   1525760 Jul 27 02:46 result.tar.gz
2025-07-27 04:46:54 (8368): Guest Log: -rw-r--r--. 1 atlas atlas      8594 Jul 27 02:46 runtime_log.err
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas       657 Jul 27 02:46 47hMDmyqpz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSiRLDmbfvRAn.diag
2025-07-27 04:46:54 (8368): Guest Log: Looking for outputfile HITS.45743349._035294.pool.root.1
2025-07-27 04:46:54 (8368): Guest Log: HITS file was successfully produced
2025-07-27 04:46:54 (8368): Guest Log: -rw-------. 1 atlas atlas 210987714 Jul 27 02:45 /home/atlas/RunAtlas/HITS.45743349._035294.pool.root.1
2025-07-27 04:46:55 (8368): Guest Log: Successfully finished the ATLAS job!
2025-07-27 04:46:55 (8368): Guest Log: Copying the results back to the shared directory!
2025-07-27 04:46:55 (8368): Guest Log:  *** Contents of shared directory: ***
2025-07-27 04:46:55 (8368): Guest Log: total 348720
2025-07-27 04:46:55 (8368): Guest Log: -rwxrwxrwx. 1 root root 143997168 Jul 26 22:57 ATLAS.root_0
2025-07-27 04:46:55 (8368): Guest Log: -rwxrwxrwx. 1 root root 210987714 Jul 27  2025 HITS.pool.root.1
2025-07-27 04:46:55 (8368): Guest Log: -rwxrwxrwx. 1 root root      8838 Jul 26 22:57 init_data.xml
2025-07-27 04:46:55 (8368): Guest Log: -rwxrwxrwx. 1 root root    542884 Jul 26 20:12 input.tar.gz
2025-07-27 04:46:55 (8368): Guest Log: -rwxrwxrwx. 1 root root   1525760 Jul 27  2025 result.tar.gz
2025-07-27 04:46:55 (8368): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 26 20:12 start_atlas.sh
2025-07-27 04:46:55 (8368): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-27 04:46:55 (8368): VM Completion File Detected.
2025-07-27 04:46:55 (8368): Powering off VM.
2025-07-27 04:46:56 (8368): Successfully stopped VM.
2025-07-27 04:46:56 (8368): Deregistering VM. (boinc_02e7d7d29339fbef, slot#3)
2025-07-27 04:46:56 (8368): Removing network bandwidth throttle group from VM.
2025-07-27 04:46:56 (8368): Removing VM from VirtualBox.
04:47:02 (8368): called boinc_finish(0)

</stderr_txt>
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