Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:12:53 (867599): wrapper (7.7.26015): starting
07:12:53 (867599): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 07:12:53] Arguments: --nthreads 4
[2025-07-29 07:12:53] Threads: 4
[2025-07-29 07:12:53] Checking for CVMFS
[2025-07-29 07:12:53] No cvmfs_config command found, will try listing directly
[2025-07-29 07:12:53] CVMFS is ok
[2025-07-29 07:12:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 07:12:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 07:12:53] Further information can be found at the LHC@home message board.
[2025-07-29 07:12:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 07:12:53] Checking for apptainer binary...
[2025-07-29 07:12:53] which: no apptainer in ((null))
[2025-07-29 07:12:53] apptainer is not installed, using version from CVMFS
[2025-07-29 07:12:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 07:12:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-07-29 07:12:53] apptainer works
[2025-07-29 07:12:53] Set ATHENA_PROC_NUMBER=4
[2025-07-29 07:12:53] Set ATHENA_CORE_NUMBER=4
[2025-07-29 07:12:53] Starting ATLAS job with PandaID=6745229202
[2025-07-29 07:12:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 10:46:24]  *** The last 200 lines of the pilot log: ***
[2025-07-29 10:46:24] 2025-07-29 08:45:46,569 | INFO     | executing command: lscpu
[2025-07-29 10:46:24] 2025-07-29 08:45:46,619 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-29 10:46:24] 2025-07-29 08:45:48,840 | INFO     | monitor loop #927: job 0:6745229202 is in state 'finished'
[2025-07-29 10:46:24] 2025-07-29 08:45:48,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 10:46:24] 2025-07-29 08:45:50,727 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-29 10:46:24] 2025-07-29 08:45:50,738 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2641.2041718749992
[2025-07-29 10:46:24] 2025-07-29 08:45:50,750 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6745229202/memory_monitor_summary.json (trf name=prmon)
[2025-07-29 10:46:24] 2025-07-29 08:45:50,751 | INFO     | extracted standard info from prmon json
[2025-07-29 10:46:24] 2025-07-29 08:45:50,751 | INFO     | extracted standard memory fields from prmon json
[2025-07-29 10:46:24] 2025-07-29 08:45:50,751 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 10:46:24] 2025-07-29 08:45:50,752 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 10:46:24] 2025-07-29 08:45:50,752 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 10:46:24] 2025-07-29 08:45:50,756 | INFO     | fitting pss+swap vs Time
[2025-07-29 10:46:24] 2025-07-29 08:45:50,757 | INFO     | sum of square deviations: 2830787960.0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,758 | INFO     | sum of deviations: 3894073775.000005
[2025-07-29 10:46:24] 2025-07-29 08:45:50,758 | INFO     | mean x: 1753772357.0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,758 | INFO     | mean y: 2349324.5215311004
[2025-07-29 10:46:24] 2025-07-29 08:45:50,758 | INFO     | -- intersect: -2410165861.784986
[2025-07-29 10:46:24] 2025-07-29 08:45:50,758 | INFO     | intersect: -2410165861.784986
[2025-07-29 10:46:24] 2025-07-29 08:45:50,759 | INFO     | chi2: 1.427992377518657
[2025-07-29 10:46:24] 2025-07-29 08:45:50,759 | INFO     | sum of square deviations: 2632440055.0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,760 | INFO     | sum of deviations: 4000201544.499999
[2025-07-29 10:46:24] 2025-07-29 08:45:50,761 | INFO     | mean x: 1753772204.5
[2025-07-29 10:46:24] 2025-07-29 08:45:50,761 | INFO     | mean y: 2349406.132352941
[2025-07-29 10:46:24] 2025-07-29 08:45:50,761 | INFO     | -- intersect: -2662646618.304021
[2025-07-29 10:46:24] 2025-07-29 08:45:50,761 | INFO     | intersect: -2662646618.304021
[2025-07-29 10:46:24] 2025-07-29 08:45:50,761 | INFO     | chi2: 1.4285562696729908
[2025-07-29 10:46:24] 2025-07-29 08:45:50,761 | INFO     | current chi2=1.4285562696729908 (change=-0.03948845688614094 %)
[2025-07-29 10:46:24] 2025-07-29 08:45:50,761 | INFO     | right removable region: 203
[2025-07-29 10:46:24] 2025-07-29 08:45:50,762 | INFO     | sum of square deviations: 2632440055.0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,763 | INFO     | sum of deviations: -23659392229.000004
[2025-07-29 10:46:24] 2025-07-29 08:45:50,763 | INFO     | mean x: 1753772509.5
[2025-07-29 10:46:24] 2025-07-29 08:45:50,763 | INFO     | mean y: 2370244.31372549
[2025-07-29 10:46:24] 2025-07-29 08:45:50,763 | INFO     | -- intersect: 15764625344.439127
[2025-07-29 10:46:24] 2025-07-29 08:45:50,763 | INFO     | intersect: 15764625344.439127
[2025-07-29 10:46:24] 2025-07-29 08:45:50,764 | INFO     | chi2: 0.035201670940491925
[2025-07-29 10:46:24] 2025-07-29 08:45:50,764 | INFO     | current chi2=0.035201670940491925 (change=97.53488383448797 %)
[2025-07-29 10:46:24] 2025-07-29 08:45:50,764 | INFO     | sum of square deviations: 2443580700.0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,765 | INFO     | sum of deviations: -20750916133.0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,766 | INFO     | mean x: 1753772662.0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,766 | INFO     | mean y: 2367878.814070352
[2025-07-29 10:46:24] 2025-07-29 08:45:50,766 | INFO     | -- intersect: 14895426014.978819
[2025-07-29 10:46:24] 2025-07-29 08:45:50,766 | INFO     | intersect: 14895426014.978819
[2025-07-29 10:46:24] 2025-07-29 08:45:50,766 | INFO     | chi2: 0.030615832142438872
[2025-07-29 10:46:24] 2025-07-29 08:45:50,766 | INFO     | current chi2=0.030615832142438872 (change=13.027332724646417 %)
[2025-07-29 10:46:24] 2025-07-29 08:45:50,766 | INFO     | left removable region: 20
[2025-07-29 10:46:24] 2025-07-29 08:45:50,767 | INFO     | sum of square deviations: 1900284932.0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,768 | INFO     | sum of deviations: -13880781739.0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,768 | INFO     | mean x: 1753772784.0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,768 | INFO     | mean y: 2362982.169398907
[2025-07-29 10:46:24] 2025-07-29 08:45:50,768 | INFO     | -- intersect: 12812935136.146986
[2025-07-29 10:46:24] 2025-07-29 08:45:50,768 | INFO     | intersect: 12812935136.146986
[2025-07-29 10:46:24] 2025-07-29 08:45:50,769 | INFO     | chi2: 0.021230680376160545
[2025-07-29 10:46:24] 2025-07-29 08:45:50,769 | INFO     | -- intersect: 12812935136.146986
[2025-07-29 10:46:24] 2025-07-29 08:45:50,769 | INFO     | current memory leak: -7.30 B/s (using 183 data points, chi2=0.02)
[2025-07-29 10:46:24] 2025-07-29 08:45:50,769 | INFO     | could have reported an average CPU frequency of 2542 MHz (11 samples)
[2025-07-29 10:46:24] 2025-07-29 08:45:50,770 | INFO     | ..............................
[2025-07-29 10:46:24] 2025-07-29 08:45:50,770 | INFO     | . Timing measurements:
[2025-07-29 10:46:24] 2025-07-29 08:45:50,770 | INFO     | . get job = 0 s
[2025-07-29 10:46:24] 2025-07-29 08:45:50,770 | INFO     | . initial setup = 1 s
[2025-07-29 10:46:24] 2025-07-29 08:45:50,770 | INFO     | . payload setup = 7 s
[2025-07-29 10:46:24] 2025-07-29 08:45:50,770 | INFO     | . stage-in = 0 s
[2025-07-29 10:46:24] 2025-07-29 08:45:50,770 | INFO     | . payload execution = 12730 s
[2025-07-29 10:46:24] 2025-07-29 08:45:50,770 | INFO     | . stage-out = 1 s
[2025-07-29 10:46:24] 2025-07-29 08:45:50,770 | INFO     | . log creation = 0 s
[2025-07-29 10:46:24] 2025-07-29 08:45:50,770 | INFO     | ..............................
[2025-07-29 10:46:24] 2025-07-29 08:45:50,873 | INFO     | 
[2025-07-29 10:46:24] 2025-07-29 08:45:50,873 | INFO     | job summary report
[2025-07-29 10:46:24] 2025-07-29 08:45:50,873 | INFO     | --------------------------------------------------
[2025-07-29 10:46:24] 2025-07-29 08:45:50,873 | INFO     | PanDA job id: 6745229202
[2025-07-29 10:46:24] 2025-07-29 08:45:50,873 | INFO     | task id: 45743349
[2025-07-29 10:46:24] 2025-07-29 08:45:50,873 | INFO     | errors: (none)
[2025-07-29 10:46:24] 2025-07-29 08:45:50,873 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 10:46:24] 2025-07-29 08:45:50,874 | INFO     | pilot state: finished 
[2025-07-29 10:46:24] 2025-07-29 08:45:50,874 | INFO     | transexitcode: 0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,874 | INFO     | exeerrorcode: 0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,874 | INFO     | exeerrordiag: 
[2025-07-29 10:46:24] 2025-07-29 08:45:50,874 | INFO     | exitcode: 0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,874 | INFO     | exitmsg: OK
[2025-07-29 10:46:24] 2025-07-29 08:45:50,874 | INFO     | cpuconsumptiontime: 48921 s
[2025-07-29 10:46:24] 2025-07-29 08:45:50,874 | INFO     | nevents: 400
[2025-07-29 10:46:24] 2025-07-29 08:45:50,874 | INFO     | neventsw: 0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,874 | INFO     | pid: 890541
[2025-07-29 10:46:24] 2025-07-29 08:45:50,874 | INFO     | pgrp: 890541
[2025-07-29 10:46:24] 2025-07-29 08:45:50,874 | INFO     | corecount: 4
[2025-07-29 10:46:24] 2025-07-29 08:45:50,875 | INFO     | event service: False
[2025-07-29 10:46:24] 2025-07-29 08:45:50,875 | INFO     | sizes: {0: 2391748, 1: 2391947, 5: 2392209, 11: 2392265, 12742: 2422233, 12744: 2431253, 12745: 2431437, 12751: 2431631}
[2025-07-29 10:46:24] 2025-07-29 08:45:50,875 | INFO     | --------------------------------------------------
[2025-07-29 10:46:24] 2025-07-29 08:45:50,875 | INFO     | 
[2025-07-29 10:46:24] 2025-07-29 08:45:50,875 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-07-29 10:46:24] 2025-07-29 08:45:50,898 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,899 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,899 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,899 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,899 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,900 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,900 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,900 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,900 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,900 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,900 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,900 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,900 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 10:46:24] 2025-07-29 08:45:50,900 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,900 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 10:46:24] 2025-07-29 08:45:50,901 | INFO     | job 6745229202 has completed (purged errors)
[2025-07-29 10:46:24] 2025-07-29 08:45:50,901 | INFO     | overall cleanup function is called
[2025-07-29 10:46:24] 2025-07-29 08:45:51,908 | INFO     | --- collectZombieJob: --- 10, [890541]
[2025-07-29 10:46:24] 2025-07-29 08:45:51,908 | INFO     | zombie collector waiting for pid 890541
[2025-07-29 10:46:24] 2025-07-29 08:45:51,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 10:46:24] 2025-07-29 08:45:51,909 | INFO     | collected zombie processes
[2025-07-29 10:46:24] 2025-07-29 08:45:51,909 | INFO     | will attempt to kill all subprocesses of pid=890541
[2025-07-29 10:46:24] 2025-07-29 08:45:52,103 | INFO     | process IDs to be killed: [890541] (in reverse order)
[2025-07-29 10:46:24] 2025-07-29 08:45:52,192 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 10:46:24] 2025-07-29 08:45:52,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 10:46:24] 2025-07-29 08:45:52,200 | INFO     | did not find any defunct processes belonging to 890541
[2025-07-29 10:46:24] 2025-07-29 08:45:52,206 | INFO     | did not find any defunct processes belonging to 890541
[2025-07-29 10:46:24] 2025-07-29 08:45:52,206 | INFO     | ready for new job
[2025-07-29 10:46:24] 2025-07-29 08:45:52,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 10:46:24] 2025-07-29 08:45:52,208 | INFO     | ***************************************
[2025-07-29 10:46:24] 2025-07-29 08:45:52,208 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 10:46:24] 2025-07-29 08:45:52,208 | INFO     | ***************************************
[2025-07-29 10:46:24] 2025-07-29 08:45:52,208 | INFO     | 
[2025-07-29 10:46:24] 2025-07-29 08:45:52,210 | INFO     | architecture information:
[2025-07-29 10:46:24] 2025-07-29 08:45:52,211 | INFO     | executing command: cat /etc/os-release
[2025-07-29 10:46:24] 2025-07-29 08:45:52,221 | INFO     | cat /etc/os-release:
[2025-07-29 10:46:24] NAME="CentOS Linux"
[2025-07-29 10:46:24] VERSION="7 (Core)"
[2025-07-29 10:46:24] ID="centos"
[2025-07-29 10:46:24] ID_LIKE="rhel fedora"
[2025-07-29 10:46:24] VERSION_ID="7"
[2025-07-29 10:46:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 10:46:24] ANSI_COLOR="0;31"
[2025-07-29 10:46:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 10:46:24] HOME_URL="https://www.centos.org/"
[2025-07-29 10:46:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 10:46:24] 
[2025-07-29 10:46:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 10:46:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 10:46:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 10:46:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 10:46:24] 
[2025-07-29 10:46:24] 2025-07-29 08:45:52,221 | INFO     | ***************************************
[2025-07-29 10:46:24] 2025-07-29 08:45:52,724 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-07-29 10:46:24] 2025-07-29 08:45:52,738 | INFO     | sufficient remaining disk space (682284285952 B)
[2025-07-29 10:46:24] 2025-07-29 08:45:52,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 10:46:24] 2025-07-29 08:45:52,739 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 10:46:24] 2025-07-29 08:45:52,739 | INFO     | update_server=False
[2025-07-29 10:46:24] 2025-07-29 08:45:52,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 10:46:24] 2025-07-29 08:45:52,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 10:46:24] 2025-07-29 08:45:52,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 10:46:24] 2025-07-29 08:45:52,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 10:46:24] 2025-07-29 08:45:52,740 | INFO     | aborting loop
[2025-07-29 10:46:24] 2025-07-29 08:45:53,656 | INFO     | all payload control threads have been joined
[2025-07-29 10:46:24] 2025-07-29 08:45:53,685 | INFO     | all data control threads have been joined
[2025-07-29 10:46:24] 2025-07-29 08:45:53,744 | INFO     | [job] retrieve thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:53,745 | INFO     | [job] job monitor thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:53,745 | INFO     | [job] queue monitor thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:53,848 | INFO     | [payload] validate_post thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:53,905 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:53,958 | INFO     | all job control threads have been joined
[2025-07-29 10:46:24] 2025-07-29 08:45:54,496 | INFO     | [job] validate thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:54,549 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:54,661 | INFO     | [payload] control thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:54,690 | INFO     | [data] control thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:54,745 | INFO     | [data] copytool_out thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:54,963 | INFO     | [job] control thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:54,974 | INFO     | [payload] failed_post thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:55,110 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:55,112 | INFO     | [data] copytool_in thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:55,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:45:55,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 10:46:24] 2025-07-29 08:45:59,880 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 10:46:24] 2025-07-29 08:46:00,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22837278623552)>', '<ExcThread(monitor, started 22837041530624)>']
[2025-07-29 10:46:24] 2025-07-29 08:46:05,162 | INFO     | all workflow threads have been joined
[2025-07-29 10:46:24] 2025-07-29 08:46:05,162 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 10:46:24] 2025-07-29 08:46:05,162 | INFO     | traces error code: 0
[2025-07-29 10:46:24] 2025-07-29 08:46:05,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 10:46:24] 2025-07-29 08:46:24,185 | INFO     | PID=873586 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-29 10:46:24] 2025-07-29 08:46:24,186 | INFO     | .. there are 11 such processes running
[2025-07-29 10:46:24] 2025-07-29 08:46:24,186 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 10:46:24] 2025-07-29 08:46:24,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 10:46:24] 2025-07-29 08:46:24,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 10:46:24] 2025-07-29 08:46:24,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 10:46:24] 2025-07-29 08:46:24,186 | INFO     | [monitor] control thread has ended
[2025-07-29 10:46:24] 2025-07-29 08:46:24,322 [wrapper] ==== pilot stdout END ====
[2025-07-29 10:46:24] 2025-07-29 08:46:24,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 10:46:24] 2025-07-29 08:46:24,328 [wrapper] pilotpid: 873586
[2025-07-29 10:46:24] 2025-07-29 08:46:24,330 [wrapper] Pilot exit status: 0
[2025-07-29 10:46:24] 2025-07-29 08:46:24,339 [wrapper] pandaids: 6745229202
[2025-07-29 10:46:24] 2025-07-29 08:46:24,399 [wrapper] cleanup supervisor_pilot 1410982 873587
[2025-07-29 10:46:24] 2025-07-29 08:46:24,402 [wrapper] Test setup, not cleaning
[2025-07-29 10:46:24] 2025-07-29 08:46:24,405 [wrapper] apfmon messages muted
[2025-07-29 10:46:24] 2025-07-29 08:46:24,407 [wrapper] ==== wrapper stdout END ====
[2025-07-29 10:46:24] 2025-07-29 08:46:24,410 [wrapper] ==== wrapper stderr END ====
[2025-07-29 10:46:24]  *** Error codes and diagnostics ***
[2025-07-29 10:46:24]     "exeErrorCode": 0,
[2025-07-29 10:46:24]     "exeErrorDiag": "",
[2025-07-29 10:46:24]     "pilotErrorCode": 0,
[2025-07-29 10:46:24]     "pilotErrorDiag": "",
[2025-07-29 10:46:24]  *** Listing of results directory ***
[2025-07-29 10:46:24] total 445464
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc    530466 Jul 26 16:04 pilot3.tar.gz
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc      5112 Jul 26 16:20 queuedata.json
[2025-07-29 10:46:24] -rwx------ 1 boinc boinc     36292 Jul 26 16:20 runpilot2-wrapper.sh
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc       100 Jul 29 07:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 10:46:24] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 07:12 run_atlas
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc       105 Jul 29 07:12 job.xml
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc      6634 Jul 29 07:12 init_data.xml
[2025-07-29 10:46:24] -rw-r--r-- 2 boinc boinc 230346101 Jul 29 07:12 EVNT.45743347._002243.pool.root.1
[2025-07-29 10:46:24] -rw-r--r-- 2 boinc boinc     15095 Jul 29 07:12 start_atlas.sh
[2025-07-29 10:46:24] drwxrwx--x 2 boinc boinc      4096 Jul 29 07:12 shared
[2025-07-29 10:46:24] -rw-r--r-- 2 boinc boinc    542900 Jul 29 07:12 input.tar.gz
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc         0 Jul 29 07:12 boinc_lockfile
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc      2562 Jul 29 07:12 pandaJob.out
[2025-07-29 10:46:24] -rw------- 1 boinc boinc    977332 Jul 29 07:13 agis_schedconf.cvmfs.json
[2025-07-29 10:46:24] drwx------ 4 boinc boinc      4096 Jul 29 07:13 pilot3
[2025-07-29 10:46:24] -rw------- 1 boinc boinc 218923509 Jul 29 10:45 HITS.45743349._039273.pool.root.1
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc       531 Jul 29 10:45 boinc_task_state.xml
[2025-07-29 10:46:24] -rw------- 1 boinc boinc      1036 Jul 29 10:45 memory_monitor_summary.json
[2025-07-29 10:46:24] -rw------- 1 boinc boinc        95 Jul 29 10:45 pilot_heartbeat.json
[2025-07-29 10:46:24] -rw------- 1 boinc boinc   1589827 Jul 29 10:45 agis_ddmendpoints.agis.ALL.json
[2025-07-29 10:46:24] -rw------- 1 boinc boinc    314430 Jul 29 10:45 log.45743349._039273.job.log.tgz.1
[2025-07-29 10:46:24] -rw------- 1 boinc boinc      7836 Jul 29 10:45 heartbeat.json
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc        28 Jul 29 10:46 wrapper_checkpoint.txt
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc      8192 Jul 29 10:46 boinc_mmap_file
[2025-07-29 10:46:24] -rw------- 1 boinc boinc       822 Jul 29 10:46 pilotlog.txt
[2025-07-29 10:46:24] -rw------- 1 boinc boinc   1190357 Jul 29 10:46 log.45743349._039273.job.log.1
[2025-07-29 10:46:24] -rw------- 1 boinc boinc       357 Jul 29 10:46 output.list
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc       620 Jul 29 10:46 runtime_log
[2025-07-29 10:46:24] -rw------- 1 boinc boinc   1525760 Jul 29 10:46 result.tar.gz
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc      9027 Jul 29 10:46 runtime_log.err
[2025-07-29 10:46:24] -rw------- 1 boinc boinc       665 Jul 29 10:46 BcJMDmbwuz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrt0KDmEjNoim.diag
[2025-07-29 10:46:24] -rw-r--r-- 1 boinc boinc     21018 Jul 29 10:46 stderr.txt
[2025-07-29 10:46:24] HITS file was successfully produced:
[2025-07-29 10:46:24] -rw------- 1 boinc boinc 218923509 Jul 29 10:45 shared/HITS.pool.root.1
[2025-07-29 10:46:24]  *** Contents of shared directory: ***
[2025-07-29 10:46:24] total 440792
[2025-07-29 10:46:24] -rw-r--r-- 2 boinc boinc 230346101 Jul 29 07:12 ATLAS.root_0
[2025-07-29 10:46:24] -rw-r--r-- 2 boinc boinc     15095 Jul 29 07:12 start_atlas.sh
[2025-07-29 10:46:24] -rw-r--r-- 2 boinc boinc    542900 Jul 29 07:12 input.tar.gz
[2025-07-29 10:46:24] -rw------- 1 boinc boinc 218923509 Jul 29 10:45 HITS.pool.root.1
[2025-07-29 10:46:24] -rw------- 1 boinc boinc   1525760 Jul 29 10:46 result.tar.gz
10:46:26 (867599): run_atlas exited; CPU time 49375.254192
10:46:26 (867599): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN