Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:47:39 (10000): wrapper (7.7.26015): starting
09:47:39 (10000): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 09:47:39] Arguments: --nthreads 8
[2025-07-27 09:47:39] Threads: 8
[2025-07-27 09:47:39] Checking for CVMFS
[2025-07-27 09:47:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 09:47:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 09:47:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 09:47:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 09:47:41] 2.11.2.0 14280 109247 142024 148804 3 109 15883597 25165824 4353 130560 0 91064404 99.890 49112420 3394 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 09:47:41] CVMFS is ok
[2025-07-27 09:47:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 09:47:41] Checking for apptainer binary...
[2025-07-27 09:47:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 09:47:41] Running /usr/bin/apptainer --version
[2025-07-27 09:47:41] apptainer version 1.3.2-1.el7
[2025-07-27 09:47:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 09:47:42] cg-vwn302.simple-grid.lan
[2025-07-27 09:47:42] apptainer works
[2025-07-27 09:47:42] Set ATHENA_PROC_NUMBER=8
[2025-07-27 09:47:42] Set ATHENA_CORE_NUMBER=8
[2025-07-27 09:47:42] Starting ATLAS job with PandaID=6745350794
[2025-07-27 09:47:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:04:45]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:04:45] 2025-07-27 12:15:30,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:04:45] 2025-07-27 12:15:30,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:04:45] 2025-07-27 12:15:30,306 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:04:45] 2025-07-27 12:15:30,307 | INFO     | sum of square deviations: 5513070810.0
[2025-07-27 18:04:45] 2025-07-27 12:15:30,309 | INFO     | sum of deviations: 9367145787.000004
[2025-07-27 18:04:45] 2025-07-27 12:15:30,309 | INFO     | mean x: 1753610476.0
[2025-07-27 18:04:45] 2025-07-27 12:15:30,309 | INFO     | mean y: 2489012.5057471264
[2025-07-27 18:04:45] 2025-07-27 12:15:30,309 | INFO     | -- intersect: -2977034659.2213116
[2025-07-27 18:04:45] 2025-07-27 12:15:30,309 | INFO     | intersect: -2977034659.2213116
[2025-07-27 18:04:45] 2025-07-27 12:15:30,310 | INFO     | chi2: 2.5606842599584474
[2025-07-27 18:04:45] 2025-07-27 12:15:30,310 | INFO     | sum of square deviations: 5202255680.0
[2025-07-27 18:04:45] 2025-07-27 12:15:30,312 | INFO     | sum of deviations: 26156284275.5
[2025-07-27 18:04:45] 2025-07-27 12:15:30,313 | INFO     | mean x: 1753610323.5
[2025-07-27 18:04:45] 2025-07-27 12:15:30,313 | INFO     | mean y: 2497118.41015625
[2025-07-27 18:04:45] 2025-07-27 12:15:30,313 | INFO     | -- intersect: -8814434026.71909
[2025-07-27 18:04:45] 2025-07-27 12:15:30,313 | INFO     | intersect: -8814434026.71909
[2025-07-27 18:04:45] 2025-07-27 12:15:30,313 | INFO     | chi2: 1.7939234641247106
[2025-07-27 18:04:45] 2025-07-27 12:15:30,314 | INFO     | current chi2=1.7939234641247106 (change=29.94358999364409 %)
[2025-07-27 18:04:45] 2025-07-27 12:15:30,314 | INFO     | sum of square deviations: 4903347750.0
[2025-07-27 18:04:45] 2025-07-27 12:15:30,316 | INFO     | sum of deviations: 25429608020.000004
[2025-07-27 18:04:45] 2025-07-27 12:15:30,316 | INFO     | mean x: 1753610171.0
[2025-07-27 18:04:45] 2025-07-27 12:15:30,316 | INFO     | mean y: 2496747.609561753
[2025-07-27 18:04:45] 2025-07-27 12:15:30,317 | INFO     | -- intersect: -9092028369.116083
[2025-07-27 18:04:45] 2025-07-27 12:15:30,317 | INFO     | intersect: -9092028369.116083
[2025-07-27 18:04:45] 2025-07-27 12:15:30,317 | INFO     | chi2: 1.7947102653297315
[2025-07-27 18:04:45] 2025-07-27 12:15:30,317 | INFO     | current chi2=1.7947102653297315 (change=-0.0438592404166386 %)
[2025-07-27 18:04:45] 2025-07-27 12:15:30,317 | INFO     | right removable region: 250
[2025-07-27 18:04:45] 2025-07-27 12:15:30,318 | INFO     | sum of square deviations: 5202255680.0
[2025-07-27 18:04:45] 2025-07-27 12:15:30,325 | INFO     | sum of deviations: -36939785646.5
[2025-07-27 18:04:45] 2025-07-27 12:15:30,326 | INFO     | mean x: 1753610628.5
[2025-07-27 18:04:45] 2025-07-27 12:15:30,326 | INFO     | mean y: 2511576.43359375
[2025-07-27 18:04:45] 2025-07-27 12:15:30,326 | INFO     | -- intersect: 12454417962.590714
[2025-07-27 18:04:45] 2025-07-27 12:15:30,326 | INFO     | intersect: 12454417962.590714
[2025-07-27 18:04:45] 2025-07-27 12:15:30,327 | INFO     | chi2: 0.9369501941737053
[2025-07-27 18:04:45] 2025-07-27 12:15:30,327 | INFO     | current chi2=0.9369501941737053 (change=63.410163102697034 %)
[2025-07-27 18:04:45] 2025-07-27 12:15:30,327 | INFO     | sum of square deviations: 4903347750.0
[2025-07-27 18:04:45] 2025-07-27 12:15:30,329 | INFO     | sum of deviations: -33338113205.99999
[2025-07-27 18:04:45] 2025-07-27 12:15:30,329 | INFO     | mean x: 1753610781.0
[2025-07-27 18:04:45] 2025-07-27 12:15:30,330 | INFO     | mean y: 2509713.868525896
[2025-07-27 18:04:45] 2025-07-27 12:15:30,330 | INFO     | -- intersect: 11925399485.706564
[2025-07-27 18:04:45] 2025-07-27 12:15:30,330 | INFO     | intersect: 11925399485.706564
[2025-07-27 18:04:45] 2025-07-27 12:15:30,330 | INFO     | chi2: 0.9233166301510183
[2025-07-27 18:04:45] 2025-07-27 12:15:30,330 | INFO     | current chi2=0.9233166301510183 (change=1.4551001864843438 %)
[2025-07-27 18:04:45] 2025-07-27 12:15:30,330 | INFO     | left removable region: 20
[2025-07-27 18:04:45] 2025-07-27 12:15:30,331 | INFO     | sum of square deviations: 3772712597.5
[2025-07-27 18:04:45] 2025-07-27 12:15:30,333 | INFO     | sum of deviations: 46604304.99999967
[2025-07-27 18:04:45] 2025-07-27 12:15:30,333 | INFO     | mean x: 1753610750.5
[2025-07-27 18:04:45] 2025-07-27 12:15:30,333 | INFO     | mean y: 2508944.4782608696
[2025-07-27 18:04:45] 2025-07-27 12:15:30,333 | INFO     | -- intersect: -19153402.746846125
[2025-07-27 18:04:45] 2025-07-27 12:15:30,333 | INFO     | intersect: -19153402.746846125
[2025-07-27 18:04:45] 2025-07-27 12:15:30,333 | INFO     | chi2: 0.0663399651130648
[2025-07-27 18:04:45] 2025-07-27 12:15:30,334 | INFO     | -- intersect: -19153402.746846125
[2025-07-27 18:04:45] 2025-07-27 12:15:30,334 | INFO     | current memory leak: 0.01 B/s (using 230 data points, chi2=0.07)
[2025-07-27 18:04:45] 2025-07-27 12:15:30,334 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 18:04:45] 2025-07-27 12:15:30,335 | INFO     | ..............................
[2025-07-27 18:04:45] 2025-07-27 12:15:30,335 | INFO     | . Timing measurements:
[2025-07-27 18:04:45] 2025-07-27 12:15:30,335 | INFO     | . get job = 0 s
[2025-07-27 18:04:45] 2025-07-27 12:15:30,335 | INFO     | . initial setup = 2 s
[2025-07-27 18:04:45] 2025-07-27 12:15:30,335 | INFO     | . payload setup = 13 s
[2025-07-27 18:04:45] 2025-07-27 12:15:30,335 | INFO     | . stage-in = 0 s
[2025-07-27 18:04:45] 2025-07-27 12:15:30,335 | INFO     | . payload execution = 15896 s
[2025-07-27 18:04:45] 2025-07-27 12:15:30,335 | INFO     | . stage-out = 4 s
[2025-07-27 18:04:45] 2025-07-27 12:15:30,335 | INFO     | . log creation = 2 s
[2025-07-27 18:04:45] 2025-07-27 12:15:30,335 | INFO     | ..............................
[2025-07-27 18:04:45] 2025-07-27 12:15:30,495 | INFO     | 
[2025-07-27 18:04:45] 2025-07-27 12:15:30,496 | INFO     | job summary report
[2025-07-27 18:04:45] 2025-07-27 12:15:30,496 | INFO     | --------------------------------------------------
[2025-07-27 18:04:45] 2025-07-27 12:15:30,496 | INFO     | PanDA job id: 6745350794
[2025-07-27 18:04:45] 2025-07-27 12:15:30,496 | INFO     | task id: 45743349
[2025-07-27 18:04:45] 2025-07-27 12:15:30,496 | INFO     | errors: (none)
[2025-07-27 18:04:45] 2025-07-27 12:15:30,496 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:04:45] 2025-07-27 12:15:30,496 | INFO     | pilot state: finished 
[2025-07-27 18:04:45] 2025-07-27 12:15:30,497 | INFO     | transexitcode: 0
[2025-07-27 18:04:45] 2025-07-27 12:15:30,497 | INFO     | exeerrorcode: 0
[2025-07-27 18:04:45] 2025-07-27 12:15:30,497 | INFO     | exeerrordiag: 
[2025-07-27 18:04:45] 2025-07-27 12:15:30,497 | INFO     | exitcode: 0
[2025-07-27 18:04:45] 2025-07-27 12:15:30,497 | INFO     | exitmsg: OK
[2025-07-27 18:04:45] 2025-07-27 12:15:30,497 | INFO     | cpuconsumptiontime: 61115 s
[2025-07-27 18:04:45] 2025-07-27 12:15:30,497 | INFO     | nevents: 400
[2025-07-27 18:04:45] 2025-07-27 12:15:30,497 | INFO     | neventsw: 0
[2025-07-27 18:04:45] 2025-07-27 12:15:30,498 | INFO     | pid: 20640
[2025-07-27 18:04:45] 2025-07-27 12:15:30,498 | INFO     | pgrp: 20640
[2025-07-27 18:04:45] 2025-07-27 12:15:30,498 | INFO     | corecount: 8
[2025-07-27 18:04:45] 2025-07-27 12:15:30,498 | INFO     | event service: False
[2025-07-27 18:04:45] 2025-07-27 12:15:30,498 | INFO     | sizes: {0: 2397304, 1: 2397503, 9: 2397765, 12: 2397793, 15913: 2428691, 15914: 2428690, 15919: 2437900, 15921: 2437956, 16018: 2438150}
[2025-07-27 18:04:45] 2025-07-27 12:15:30,498 | INFO     | --------------------------------------------------
[2025-07-27 18:04:45] 2025-07-27 12:15:30,498 | INFO     | 
[2025-07-27 18:04:45] 2025-07-27 12:15:30,498 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-07-27 18:04:45] 2025-07-27 12:15:30,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,821 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,822 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:04:45] 2025-07-27 12:15:30,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,822 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:04:45] 2025-07-27 12:15:30,822 | INFO     | job 6745350794 has completed (purged errors)
[2025-07-27 18:04:45] 2025-07-27 12:15:30,823 | INFO     | overall cleanup function is called
[2025-07-27 18:04:45] 2025-07-27 12:15:31,831 | INFO     | --- collectZombieJob: --- 10, [20640]
[2025-07-27 18:04:45] 2025-07-27 12:15:31,832 | INFO     | zombie collector waiting for pid 20640
[2025-07-27 18:04:45] 2025-07-27 12:15:31,832 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:04:45] 2025-07-27 12:15:31,832 | INFO     | collected zombie processes
[2025-07-27 18:04:45] 2025-07-27 12:15:31,832 | INFO     | will attempt to kill all subprocesses of pid=20640
[2025-07-27 18:04:45] 2025-07-27 12:15:31,970 | INFO     | process IDs to be killed: [20640] (in reverse order)
[2025-07-27 18:04:45] 2025-07-27 12:15:32,864 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:04:45] 2025-07-27 12:15:32,865 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:04:45] 2025-07-27 12:15:32,868 | INFO     | did not find any defunct processes belonging to 20640
[2025-07-27 18:04:45] 2025-07-27 12:15:32,871 | INFO     | did not find any defunct processes belonging to 20640
[2025-07-27 18:04:45] 2025-07-27 12:15:32,872 | INFO     | ready for new job
[2025-07-27 18:04:45] 2025-07-27 12:15:32,872 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:04:45] 2025-07-27 12:15:32,874 | INFO     | ***************************************
[2025-07-27 18:04:45] 2025-07-27 12:15:32,874 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:04:45] 2025-07-27 12:15:32,874 | INFO     | ***************************************
[2025-07-27 18:04:45] 2025-07-27 12:15:32,874 | INFO     | 
[2025-07-27 18:04:45] 2025-07-27 12:15:32,875 | INFO     | pilot is running in a VM
[2025-07-27 18:04:45] 2025-07-27 12:15:32,875 | INFO     | architecture information:
[2025-07-27 18:04:45] 2025-07-27 12:15:32,880 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:04:45] 2025-07-27 12:15:33,148 | INFO     | cat /etc/os-release:
[2025-07-27 18:04:45] NAME="CentOS Linux"
[2025-07-27 18:04:45] VERSION="7 (Core)"
[2025-07-27 18:04:45] ID="centos"
[2025-07-27 18:04:45] ID_LIKE="rhel fedora"
[2025-07-27 18:04:45] VERSION_ID="7"
[2025-07-27 18:04:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:04:45] ANSI_COLOR="0;31"
[2025-07-27 18:04:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:04:45] HOME_URL="https://www.centos.org/"
[2025-07-27 18:04:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:04:45] 
[2025-07-27 18:04:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:04:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:04:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:04:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:04:45] 
[2025-07-27 18:04:45] 2025-07-27 12:15:33,148 | INFO     | ***************************************
[2025-07-27 18:04:45] 2025-07-27 12:15:33,652 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-07-27 18:04:45] 2025-07-27 12:15:33,925 | INFO     | sufficient remaining disk space (496694722560 B)
[2025-07-27 18:04:45] 2025-07-27 12:15:33,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:04:45] 2025-07-27 12:15:33,926 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:04:45] 2025-07-27 12:15:33,926 | INFO     | update_server=False
[2025-07-27 18:04:45] 2025-07-27 12:15:33,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:04:45] 2025-07-27 12:15:33,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:04:45] 2025-07-27 12:15:33,928 | INFO     | aborting loop
[2025-07-27 18:04:45] 2025-07-27 12:15:34,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:04:45] 2025-07-27 12:15:34,512 | INFO     | all payload control threads have been joined
[2025-07-27 18:04:45] 2025-07-27 12:15:34,545 | INFO     | all data control threads have been joined
[2025-07-27 18:04:45] 2025-07-27 12:15:34,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:04:45] 2025-07-27 12:15:34,844 | INFO     | all job control threads have been joined
[2025-07-27 18:04:45] 2025-07-27 12:15:34,932 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:34,934 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:35,050 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:35,051 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:35,100 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:35,167 | INFO     | [job] validate thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:35,201 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:35,297 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:35,510 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:04:45] 2025-07-27 12:15:35,518 | INFO     | [payload] control thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:35,551 | INFO     | [data] control thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:35,850 | INFO     | [job] control thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:36,082 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:36,177 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:36,516 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:36,716 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:38,149 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:04:45] 2025-07-27 12:15:38,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140546585683776)>', '<ExcThread(monitor, started 140546119018240)>']
[2025-07-27 18:04:45] 2025-07-27 12:15:43,802 | INFO     | all workflow threads have been joined
[2025-07-27 18:04:45] 2025-07-27 12:15:43,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:04:45] 2025-07-27 12:15:43,803 | INFO     | traces error code: 0
[2025-07-27 18:04:45] 2025-07-27 12:15:43,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:04:45] 2025-07-27 12:16:03,128 | INFO     | PID=14025 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 18:04:45] 2025-07-27 12:16:03,128 | INFO     | .. there are 9 such processes running
[2025-07-27 18:04:45] 2025-07-27 12:16:03,129 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:04:45] 2025-07-27 12:16:03,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:04:45] 2025-07-27 12:16:03,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:04:45] 2025-07-27 12:16:03,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:04:45] 2025-07-27 12:16:03,130 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 18:04:45] 2025-07-27 12:16:03,130 | INFO     | [monitor] control thread has ended
[2025-07-27 18:04:45] 2025-07-27 12:16:03,716 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:04:45] 2025-07-27 12:16:03,778 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:04:45] 2025-07-27 12:16:03,854 [wrapper] pilotpid: 14025
[2025-07-27 18:04:45] 2025-07-27 12:16:03,943 [wrapper] Pilot exit status: 0
[2025-07-27 18:04:45] 2025-07-27 12:16:04,433 [wrapper] pandaids: 6745350794
[2025-07-27 18:04:45] 2025-07-27 12:16:04,923 [wrapper] cleanup supervisor_pilot 13105 14026
[2025-07-27 18:04:45] 2025-07-27 12:16:05,000 [wrapper] Test setup, not cleaning
[2025-07-27 18:04:45] 2025-07-27 12:16:05,082 [wrapper] apfmon messages muted
[2025-07-27 18:04:45] 2025-07-27 12:16:05,202 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:04:45] 2025-07-27 12:16:05,291 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:04:45]  *** Error codes and diagnostics ***
[2025-07-27 18:04:45]     "exeErrorCode": 0,
[2025-07-27 18:04:45]     "exeErrorDiag": "",
[2025-07-27 18:04:45]     "pilotErrorCode": 0,
[2025-07-27 18:04:45]     "pilotErrorDiag": "",
[2025-07-27 18:04:45]  *** Listing of results directory ***
[2025-07-27 18:04:45] total 438124
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc    530466 Jul 26 19:33 pilot3.tar.gz
[2025-07-27 18:04:45] -rwx------. 1 boinc boinc     36292 Jul 26 19:35 runpilot2-wrapper.sh
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc      5112 Jul 26 19:35 queuedata.json
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc       100 Jul 27 09:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:04:45] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 09:47 run_atlas
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc       105 Jul 27 09:47 job.xml
[2025-07-27 18:04:45] -rw-r--r--. 2 boinc boinc 228163454 Jul 27 09:47 EVNT.45743347._002354.pool.root.1
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc      6391 Jul 27 09:47 init_data.xml
[2025-07-27 18:04:45] -rw-r--r--. 2 boinc boinc     15095 Jul 27 09:47 start_atlas.sh
[2025-07-27 18:04:45] drwxrwx--x. 2 boinc boinc        68 Jul 27 09:47 shared
[2025-07-27 18:04:45] -rw-r--r--. 2 boinc boinc    542896 Jul 27 09:47 input.tar.gz
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc         0 Jul 27 09:47 boinc_lockfile
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc      2563 Jul 27 09:47 pandaJob.out
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc    980125 Jul 27 09:48 agis_schedconf.cvmfs.json
[2025-07-27 18:04:45] drwx------. 4 boinc boinc      4096 Jul 27 09:48 pilot3
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc 213050151 Jul 27 14:12 HITS.45743349._041712.pool.root.1
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc       531 Jul 27 14:12 boinc_task_state.xml
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc      1018 Jul 27 14:13 memory_monitor_summary.json
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc   1593052 Jul 27 14:13 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc    407009 Jul 27 14:13 log.45743349._041712.job.log.tgz.1
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc      7773 Jul 27 14:15 heartbeat.json
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc        95 Jul 27 14:16 pilot_heartbeat.json
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc       890 Jul 27 14:16 pilotlog.txt
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc   1375784 Jul 27 14:16 log.45743349._041712.job.log.1
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc       357 Jul 27 14:16 output.list
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc       620 Jul 27 14:16 runtime_log
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc   1802240 Jul 27 14:16 result.tar.gz
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc      8660 Jul 27 14:16 runtime_log.err
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc       657 Jul 27 14:16 G8PNDmsyxz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmY90KDmpIhV0m.diag
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc      8192 Jul 27 18:04 boinc_mmap_file
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc        28 Jul 27 18:04 wrapper_checkpoint.txt
[2025-07-27 18:04:45] -rw-r--r--. 1 boinc boinc     20586 Jul 27 18:04 stderr.txt
[2025-07-27 18:04:45] HITS file was successfully produced:
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc 213050151 Jul 27 14:12 shared/HITS.pool.root.1
[2025-07-27 18:04:45]  *** Contents of shared directory: ***
[2025-07-27 18:04:45] total 433184
[2025-07-27 18:04:45] -rw-r--r--. 2 boinc boinc 228163454 Jul 27 09:47 ATLAS.root_0
[2025-07-27 18:04:45] -rw-r--r--. 2 boinc boinc     15095 Jul 27 09:47 start_atlas.sh
[2025-07-27 18:04:45] -rw-r--r--. 2 boinc boinc    542896 Jul 27 09:47 input.tar.gz
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc 213050151 Jul 27 14:12 HITS.pool.root.1
[2025-07-27 18:04:45] -rw-------. 1 boinc boinc   1802240 Jul 27 14:16 result.tar.gz
18:04:47 (10000): run_atlas exited; CPU time 61312.308005
18:04:47 (10000): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN