Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
23:22:45 (3048916): wrapper (7.7.26015): starting
23:22:45 (3048916): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 23:22:45] Arguments: --nthreads 12
[2025-07-27 23:22:45] Threads: 12
[2025-07-27 23:22:45] Checking for CVMFS
[2025-07-27 23:22:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 23:22:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 23:22:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 23:22:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 23:22:46] 2.13.1.0 3021183 81 43848 148836 2 57 3774412 6144001 0 130560 0 68369 99.961 7992 1281 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-27 23:22:46] CVMFS is ok
[2025-07-27 23:22:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 23:22:46] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-27 23:22:46] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-27 23:22:46] Further information can be found at the LHC@home message board.
[2025-07-27 23:22:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 23:22:46] Checking for apptainer binary...
[2025-07-27 23:22:46] apptainer is not installed, using version from CVMFS
[2025-07-27 23:22:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 23:22:46] ace
[2025-07-27 23:22:46] apptainer works
[2025-07-27 23:22:46] Set ATHENA_PROC_NUMBER=12
[2025-07-27 23:22:46] Set ATHENA_CORE_NUMBER=12
[2025-07-27 23:22:46] Starting ATLAS job with PandaID=6745350596
[2025-07-27 23:22:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 00:45:21]  *** The last 200 lines of the pilot log: ***
[2025-07-28 00:45:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-28 00:45:21]  replicas=None
[2025-07-28 00:45:21]  scope=mc23_13p6TeV
[2025-07-28 00:45:21]  status=None
[2025-07-28 00:45:21]  status_code=0
[2025-07-28 00:45:21]  storage_token=
[2025-07-28 00:45:21]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6745350596/log.45743349._041514.job.log.tgz.1
[2025-07-28 00:45:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/30/log.45743349._041514.job.log.tgz.1
[2025-07-28 00:45:21]  workdir=None
[2025-07-28 00:45:21] ]
[2025-07-28 00:45:21] 2025-07-28 05:44:58,784 | INFO     | transferring file log.45743349._041514.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6745350596/log.45743349._041514.job.log.tgz.1 to /var/lib/boinc
[2025-07-28 00:45:21] 2025-07-28 05:44:58,784 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6745350596/log.45743349._041514.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.457433
[2025-07-28 00:45:21] 2025-07-28 05:44:58,800 | INFO     | adding to output.list: log.45743349._041514.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/30/log.45743349._041514.job.log.tg
[2025-07-28 00:45:21] 2025-07-28 05:44:58,800 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 00:45:21] 2025-07-28 05:44:58,800 | INFO     | summary of transferred files:
[2025-07-28 00:45:21] 2025-07-28 05:44:58,800 | INFO     |  -- lfn=log.45743349._041514.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 00:45:21] 2025-07-28 05:44:58,801 | INFO     | stage-out finished correctly
[2025-07-28 00:45:21] 2025-07-28 05:44:59,512 | WARNING  | process 3059204 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 00:45:21] 2025-07-28 05:44:59,512 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6745350596/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:45:21] 2025-07-28 05:44:59,603 | INFO     | number of running child processes to parent process 3059204: 1
[2025-07-28 00:45:21] 2025-07-28 05:44:59,603 | INFO     | maximum number of monitored processes: 6
[2025-07-28 00:45:21] 2025-07-28 05:45:00,186 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 00:45:21] 2025-07-28 05:45:00,711 | INFO     | job 6745350596 has state=finished
[2025-07-28 00:45:21] 2025-07-28 05:45:00,711 | INFO     | preparing for final server update for job 6745350596 in state='finished'
[2025-07-28 00:45:21] 2025-07-28 05:45:00,712 | INFO     | this job has now completed (state=finished)
[2025-07-28 00:45:21] 2025-07-28 05:45:00,713 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 00:45:21] 2025-07-28 05:45:00,713 | INFO     | log transfer has been attempted: DONE
[2025-07-28 00:45:21] 2025-07-28 05:45:00,713 | INFO     | job 6745350596 has finished - writing final server update
[2025-07-28 00:45:21] 2025-07-28 05:45:00,713 | INFO     | total number of processed events: 400 (read)
[2025-07-28 00:45:21] 2025-07-28 05:45:00,714 | INFO     | executing command: lscpu
[2025-07-28 00:45:21] 2025-07-28 05:45:00,740 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 00:45:21] 2025-07-28 05:45:01,821 | INFO     | PID=3052614 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 00:45:21] 2025-07-28 05:45:02,106 | INFO     | monitor loop #368: job 0:6745350596 is in state 'finished'
[2025-07-28 00:45:21] 2025-07-28 05:45:02,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:45:21] 2025-07-28 05:45:04,610 | INFO     | monitor loop #369: job 0:6745350596 is in state 'finished'
[2025-07-28 00:45:21] 2025-07-28 05:45:04,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:45:21] 2025-07-28 05:45:07,113 | INFO     | monitor loop #370: job 0:6745350596 is in state 'finished'
[2025-07-28 00:45:21] 2025-07-28 05:45:07,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 00:45:21] 2025-07-28 05:45:08,908 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 00:45:21] 2025-07-28 05:45:08,909 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2557.9041874999994
[2025-07-28 00:45:21] 2025-07-28 05:45:08,911 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6745350596/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 00:45:21] 2025-07-28 05:45:08,912 | INFO     | extracted standard info from prmon json
[2025-07-28 00:45:21] 2025-07-28 05:45:08,912 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 00:45:21] 2025-07-28 05:45:08,912 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 00:45:21] 2025-07-28 05:45:08,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 00:45:21] 2025-07-28 05:45:08,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 00:45:21] 2025-07-28 05:45:08,913 | INFO     | fitting pss+swap vs Time
[2025-07-28 00:45:21] 2025-07-28 05:45:08,914 | INFO     | sum of square deviations: 125630262.5
[2025-07-28 00:45:21] 2025-07-28 05:45:08,914 | INFO     | sum of deviations: -16200174643.500004
[2025-07-28 00:45:21] 2025-07-28 05:45:08,914 | INFO     | mean x: 1753679128.5
[2025-07-28 00:45:21] 2025-07-28 05:45:08,914 | INFO     | mean y: 2886377.0405405406
[2025-07-28 00:45:21] 2025-07-28 05:45:08,914 | INFO     | -- intersect: 226141935878.4366
[2025-07-28 00:45:21] 2025-07-28 05:45:08,914 | INFO     | intersect: 226141935878.4366
[2025-07-28 00:45:21] 2025-07-28 05:45:08,914 | INFO     | chi2: 0.05459853261949492
[2025-07-28 00:45:21] 2025-07-28 05:45:08,914 | INFO     | -- intersect: 226141935878.4366
[2025-07-28 00:45:21] 2025-07-28 05:45:08,914 | INFO     | current memory leak: -128.95 B/s (using 74 data points, chi2=0.05)
[2025-07-28 00:45:21] 2025-07-28 05:45:08,915 | INFO     | could have reported an average CPU frequency of 2520 MHz (6 samples)
[2025-07-28 00:45:21] 2025-07-28 05:45:08,915 | INFO     | ..............................
[2025-07-28 00:45:21] 2025-07-28 05:45:08,915 | INFO     | . Timing measurements:
[2025-07-28 00:45:21] 2025-07-28 05:45:08,915 | INFO     | . get job = 0 s
[2025-07-28 00:45:21] 2025-07-28 05:45:08,915 | INFO     | . initial setup = 3 s
[2025-07-28 00:45:21] 2025-07-28 05:45:08,915 | INFO     | . payload setup = 4 s
[2025-07-28 00:45:21] 2025-07-28 05:45:08,915 | INFO     | . stage-in = 0 s
[2025-07-28 00:45:21] 2025-07-28 05:45:08,915 | INFO     | . payload execution = 4900 s
[2025-07-28 00:45:21] 2025-07-28 05:45:08,915 | INFO     | . stage-out = 0 s
[2025-07-28 00:45:21] 2025-07-28 05:45:08,915 | INFO     | . log creation = 0 s
[2025-07-28 00:45:21] 2025-07-28 05:45:08,915 | INFO     | ..............................
[2025-07-28 00:45:21] 2025-07-28 05:45:08,963 | INFO     | 
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | job summary report
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | --------------------------------------------------
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | PanDA job id: 6745350596
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | task id: 45743349
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | errors: (none)
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | pilot state: finished 
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | transexitcode: 0
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | exeerrorcode: 0
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | exeerrordiag: 
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | exitcode: 0
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | exitmsg: OK
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | cpuconsumptiontime: 55006 s
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | nevents: 400
[2025-07-28 00:45:21] 2025-07-28 05:45:08,964 | INFO     | neventsw: 0
[2025-07-28 00:45:21] 2025-07-28 05:45:08,965 | INFO     | pid: 3059204
[2025-07-28 00:45:21] 2025-07-28 05:45:08,965 | INFO     | pgrp: 3059204
[2025-07-28 00:45:21] 2025-07-28 05:45:08,965 | INFO     | corecount: 12
[2025-07-28 00:45:21] 2025-07-28 05:45:08,965 | INFO     | event service: False
[2025-07-28 00:45:21] 2025-07-28 05:45:08,965 | INFO     | sizes: {0: 2397482, 3: 2397744, 10: 2397772, 4909: 2424179, 4910: 2433191, 4912: 2433247, 4920: 2433569}
[2025-07-28 00:45:21] 2025-07-28 05:45:08,965 | INFO     | --------------------------------------------------
[2025-07-28 00:45:21] 2025-07-28 05:45:08,965 | INFO     | 
[2025-07-28 00:45:21] 2025-07-28 05:45:08,965 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-07-28 00:45:21] 2025-07-28 05:45:08,981 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,981 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,981 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,981 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,981 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,981 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,981 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,981 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | job 6745350596 has completed (purged errors)
[2025-07-28 00:45:21] 2025-07-28 05:45:08,982 | INFO     | overall cleanup function is called
[2025-07-28 00:45:21] 2025-07-28 05:45:09,986 | INFO     | --- collectZombieJob: --- 10, [3059204]
[2025-07-28 00:45:21] 2025-07-28 05:45:09,987 | INFO     | zombie collector waiting for pid 3059204
[2025-07-28 00:45:21] 2025-07-28 05:45:09,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 00:45:21] 2025-07-28 05:45:09,987 | INFO     | collected zombie processes
[2025-07-28 00:45:21] 2025-07-28 05:45:09,987 | INFO     | will attempt to kill all subprocesses of pid=3059204
[2025-07-28 00:45:21] 2025-07-28 05:45:10,084 | INFO     | process IDs to be killed: [3059204] (in reverse order)
[2025-07-28 00:45:21] 2025-07-28 05:45:10,124 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 00:45:21] 2025-07-28 05:45:10,124 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 00:45:21] 2025-07-28 05:45:10,126 | INFO     | did not find any defunct processes belonging to 3059204
[2025-07-28 00:45:21] 2025-07-28 05:45:10,129 | INFO     | did not find any defunct processes belonging to 3059204
[2025-07-28 00:45:21] 2025-07-28 05:45:10,129 | INFO     | ready for new job
[2025-07-28 00:45:21] 2025-07-28 05:45:10,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 00:45:21] 2025-07-28 05:45:10,131 | INFO     | ***************************************
[2025-07-28 00:45:21] 2025-07-28 05:45:10,131 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 00:45:21] 2025-07-28 05:45:10,131 | INFO     | ***************************************
[2025-07-28 00:45:21] 2025-07-28 05:45:10,131 | INFO     | 
[2025-07-28 00:45:21] 2025-07-28 05:45:10,132 | INFO     | architecture information:
[2025-07-28 00:45:21] 2025-07-28 05:45:10,132 | INFO     | executing command: cat /etc/os-release
[2025-07-28 00:45:21] 2025-07-28 05:45:10,144 | INFO     | cat /etc/os-release:
[2025-07-28 00:45:21] NAME="CentOS Linux"
[2025-07-28 00:45:21] VERSION="7 (Core)"
[2025-07-28 00:45:21] ID="centos"
[2025-07-28 00:45:21] ID_LIKE="rhel fedora"
[2025-07-28 00:45:21] VERSION_ID="7"
[2025-07-28 00:45:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 00:45:21] ANSI_COLOR="0;31"
[2025-07-28 00:45:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 00:45:21] HOME_URL="https://www.centos.org/"
[2025-07-28 00:45:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 00:45:21] 
[2025-07-28 00:45:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 00:45:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 00:45:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 00:45:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 00:45:21] 
[2025-07-28 00:45:21] 2025-07-28 05:45:10,144 | INFO     | ***************************************
[2025-07-28 00:45:21] 2025-07-28 05:45:10,647 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-07-28 00:45:21] 2025-07-28 05:45:10,660 | INFO     | sufficient remaining disk space (22522363904 B)
[2025-07-28 00:45:21] 2025-07-28 05:45:10,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 00:45:21] 2025-07-28 05:45:10,661 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 00:45:21] 2025-07-28 05:45:10,661 | INFO     | update_server=False
[2025-07-28 00:45:21] 2025-07-28 05:45:10,661 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 00:45:21] 2025-07-28 05:45:10,661 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 00:45:21] 2025-07-28 05:45:10,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:45:21] 2025-07-28 05:45:10,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 00:45:21] 2025-07-28 05:45:10,661 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 00:45:21] 2025-07-28 05:45:10,662 | INFO     | aborting loop
[2025-07-28 00:45:21] 2025-07-28 05:45:10,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 00:45:21] 2025-07-28 05:45:10,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 00:45:21] 2025-07-28 05:45:10,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 00:45:21] 2025-07-28 05:45:11,090 | INFO     | all job control threads have been joined
[2025-07-28 00:45:21] 2025-07-28 05:45:11,494 | INFO     | all data control threads have been joined
[2025-07-28 00:45:21] 2025-07-28 05:45:11,666 | INFO     | [job] retrieve thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:11,666 | INFO     | [job] job monitor thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:11,667 | INFO     | [job] queue monitor thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:11,862 | INFO     | [payload] failed_post thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:11,863 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 00:45:21] 2025-07-28 05:45:11,942 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:11,990 | INFO     | all payload control threads have been joined
[2025-07-28 00:45:21] 2025-07-28 05:45:12,038 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:12,094 | INFO     | [job] control thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:12,499 | INFO     | [data] control thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:12,903 | INFO     | [payload] validate_post thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:12,994 | INFO     | [payload] control thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:13,068 | INFO     | [job] validate thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:13,069 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:13,110 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:13,144 | INFO     | [data] copytool_in thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:13,869 | INFO     | [data] copytool_out thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:14,754 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 00:45:21] 2025-07-28 05:45:16,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139682691196736)>', '<ExcThread(monitor, started 139681765242624)>']
[2025-07-28 00:45:21] 2025-07-28 05:45:16,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 00:45:21] 2025-07-28 05:45:16,689 | INFO     | [monitor] control thread has ended
[2025-07-28 00:45:21] 2025-07-28 05:45:21,242 | INFO     | all workflow threads have been joined
[2025-07-28 00:45:21] 2025-07-28 05:45:21,243 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 00:45:21] 2025-07-28 05:45:21,244 | INFO     | traces error code: 0
[2025-07-28 00:45:21] 2025-07-28 05:45:21,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 00:45:21] 2025-07-28 05:45:21,393 [wrapper] ==== pilot stdout END ====
[2025-07-28 00:45:21] 2025-07-28 05:45:21,396 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 00:45:21] 2025-07-28 05:45:21,398 [wrapper] pilotpid: 3052614
[2025-07-28 00:45:21] 2025-07-28 05:45:21,401 [wrapper] Pilot exit status: 0
[2025-07-28 00:45:21] 2025-07-28 05:45:21,412 [wrapper] pandaids: 6745350596
[2025-07-28 00:45:21] 2025-07-28 05:45:21,434 [wrapper] cleanup supervisor_pilot 3073929 3052615
[2025-07-28 00:45:21] 2025-07-28 05:45:21,436 [wrapper] Test setup, not cleaning
[2025-07-28 00:45:21] 2025-07-28 05:45:21,438 [wrapper] apfmon messages muted
[2025-07-28 00:45:21] 2025-07-28 05:45:21,440 [wrapper] ==== wrapper stdout END ====
[2025-07-28 00:45:21] 2025-07-28 05:45:21,442 [wrapper] ==== wrapper stderr END ====
[2025-07-28 00:45:21]  *** Error codes and diagnostics ***
[2025-07-28 00:45:21]     "exeErrorCode": 0,
[2025-07-28 00:45:21]     "exeErrorDiag": "",
[2025-07-28 00:45:21]     "pilotErrorCode": 0,
[2025-07-28 00:45:21]     "pilotErrorDiag": "",
[2025-07-28 00:45:21]  *** Listing of results directory ***
[2025-07-28 00:45:21] total 349440
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc    530466 Jul 26 12:17 pilot3.tar.gz
[2025-07-28 00:45:21] -rwx------ 1 boinc boinc     36292 Jul 26 12:23 runpilot2-wrapper.sh
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc      5112 Jul 26 12:23 queuedata.json
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc       100 Jul 27 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 00:45:21] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 23:22 run_atlas
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc       105 Jul 27 23:22 job.xml
[2025-07-28 00:45:21] -rw-r--r-- 2 boinc boinc     15095 Jul 27 23:22 start_atlas.sh
[2025-07-28 00:45:21] drwxrwx--x 2 boinc boinc      4096 Jul 27 23:22 shared
[2025-07-28 00:45:21] -rw-r--r-- 2 boinc boinc    542897 Jul 27 23:22 input.tar.gz
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc      6788 Jul 27 23:22 init_data.xml
[2025-07-28 00:45:21] -rw-r--r-- 2 boinc boinc 144984899 Jul 27 23:22 EVNT.45743347._002344.pool.root.1
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc         0 Jul 27 23:22 boinc_lockfile
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc      2563 Jul 27 23:22 pandaJob.out
[2025-07-28 00:45:21] -rw------- 1 boinc boinc    980125 Jul 27 23:22 agis_schedconf.cvmfs.json
[2025-07-28 00:45:21] -rw------- 1 boinc boinc   1593052 Jul 27 23:22 agis_ddmendpoints.agis.ALL.json
[2025-07-28 00:45:21] drwx------ 4 boinc boinc      4096 Jul 27 23:22 pilot3
[2025-07-28 00:45:21] -rw------- 1 boinc boinc 207278876 Jul 28 00:44 HITS.45743349._041514.pool.root.1
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc       529 Jul 28 00:44 boinc_task_state.xml
[2025-07-28 00:45:21] -rw------- 1 boinc boinc      1033 Jul 28 00:44 memory_monitor_summary.json
[2025-07-28 00:45:21] -rw------- 1 boinc boinc        95 Jul 28 00:44 pilot_heartbeat.json
[2025-07-28 00:45:21] -rw------- 1 boinc boinc    363368 Jul 28 00:44 log.45743349._041514.job.log.tgz.1
[2025-07-28 00:45:21] -rw------- 1 boinc boinc      7782 Jul 28 00:45 heartbeat.json
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc        27 Jul 28 00:45 wrapper_checkpoint.txt
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc      8192 Jul 28 00:45 boinc_mmap_file
[2025-07-28 00:45:21] -rw------- 1 boinc boinc      4487 Jul 28 00:45 pilotlog.txt
[2025-07-28 00:45:21] -rw------- 1 boinc boinc    476286 Jul 28 00:45 log.45743349._041514.job.log.1
[2025-07-28 00:45:21] -rw------- 1 boinc boinc       357 Jul 28 00:45 output.list
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc       620 Jul 28 00:45 runtime_log
[2025-07-28 00:45:21] -rw------- 1 boinc boinc    860160 Jul 28 00:45 result.tar.gz
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc      8697 Jul 28 00:45 runtime_log.err
[2025-07-28 00:45:21] -rw------- 1 boinc boinc       643 Jul 28 00:45 HgpMDmvnxz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmI80KDmVje51m.diag
[2025-07-28 00:45:21] -rw-r--r-- 1 boinc boinc     22103 Jul 28 00:45 stderr.txt
[2025-07-28 00:45:21] HITS file was successfully produced:
[2025-07-28 00:45:21] -rw------- 1 boinc boinc 207278876 Jul 28 00:44 shared/HITS.pool.root.1
[2025-07-28 00:45:21]  *** Contents of shared directory: ***
[2025-07-28 00:45:21] total 345408
[2025-07-28 00:45:21] -rw-r--r-- 2 boinc boinc     15095 Jul 27 23:22 start_atlas.sh
[2025-07-28 00:45:21] -rw-r--r-- 2 boinc boinc    542897 Jul 27 23:22 input.tar.gz
[2025-07-28 00:45:21] -rw-r--r-- 2 boinc boinc 144984899 Jul 27 23:22 ATLAS.root_0
[2025-07-28 00:45:21] -rw------- 1 boinc boinc 207278876 Jul 28 00:44 HITS.pool.root.1
[2025-07-28 00:45:21] -rw------- 1 boinc boinc    860160 Jul 28 00:45 result.tar.gz
00:45:23 (3048916): run_atlas exited; CPU time 55056.305843
00:45:23 (3048916): called boinc_finish(0)

</stderr_txt>
]]>

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