Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:03:59 (4026927): wrapper (7.7.26015): starting
03:03:59 (4026927): wrapper: running run_atlas (--nthreads 6)
[2025-07-27 03:03:59] Arguments: --nthreads 6
[2025-07-27 03:03:59] Threads: 6
[2025-07-27 03:03:59] Checking for CVMFS
[2025-07-27 03:03:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 03:03:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 03:03:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 03:03:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 03:03:59] 2.13.1.0 3669327 821 55124 148794 3 57 2846251 4097024 0 130560 0 918329 99.995 23879 31296 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-27 03:03:59] CVMFS is ok
[2025-07-27 03:03:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 03:03:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 03:03:59] Further information can be found at the LHC@home message board.
[2025-07-27 03:03:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 03:03:59] Checking for apptainer binary...
[2025-07-27 03:03:59] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-27 03:03:59] apptainer is not installed, using version from CVMFS
[2025-07-27 03:03:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 03:04:00] pckeatlas08
[2025-07-27 03:04:00] apptainer works
[2025-07-27 03:04:00] Set ATHENA_PROC_NUMBER=6
[2025-07-27 03:04:00] Set ATHENA_CORE_NUMBER=6
[2025-07-27 03:04:00] Starting ATLAS job with PandaID=6745135759
[2025-07-27 03:04:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 04:06:37]  *** The last 200 lines of the pilot log: ***
[2025-07-27 04:06:37]  lfn=log.45743349._037344.job.log.tgz.1
[2025-07-27 04:06:37]  mtime=0
[2025-07-27 04:06:37]  protocol_id=None
[2025-07-27 04:06:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 04:06:37]  replicas=None
[2025-07-27 04:06:37]  scope=mc23_13p6TeV
[2025-07-27 04:06:37]  status=None
[2025-07-27 04:06:37]  status_code=0
[2025-07-27 04:06:37]  storage_token=
[2025-07-27 04:06:37]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745135759/log.45743349._037344.job.log.tgz.1
[2025-07-27 04:06:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/f8/log.45743349._037344.job.log.tgz.1
[2025-07-27 04:06:37]  workdir=None
[2025-07-27 04:06:37] ]
[2025-07-27 04:06:37] 2025-07-27 02:05:58,749 | INFO     | transferring file log.45743349._037344.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745135759/log.45743349._037344.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 04:06:37] 2025-07-27 02:05:58,749 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745135759/log.45743349._037344.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._037344.job
[2025-07-27 04:06:37] 2025-07-27 02:05:58,756 | INFO     | adding to output.list: log.45743349._037344.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/f8/log.45743349._037344.job.log.tg
[2025-07-27 04:06:37] 2025-07-27 02:05:58,756 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 04:06:37] 2025-07-27 02:05:58,757 | INFO     | summary of transferred files:
[2025-07-27 04:06:37] 2025-07-27 02:05:58,757 | INFO     |  -- lfn=log.45743349._037344.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 04:06:37] 2025-07-27 02:05:58,757 | INFO     | stage-out finished correctly
[2025-07-27 04:06:37] 2025-07-27 02:05:58,790 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 04:06:37] 2025-07-27 02:06:00,298 | INFO     | monitor loop #286: job 0:6745135759 is in state 'finished'
[2025-07-27 04:06:37] 2025-07-27 02:06:00,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:06:37] 2025-07-27 02:06:01,491 | INFO     | PID=4030545 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 04:06:37] 2025-07-27 02:06:01,514 | INFO     | job 6745135759 has state=finished
[2025-07-27 04:06:37] 2025-07-27 02:06:01,515 | INFO     | preparing for final server update for job 6745135759 in state='finished'
[2025-07-27 04:06:37] 2025-07-27 02:06:01,515 | INFO     | this job has now completed (state=finished)
[2025-07-27 04:06:37] 2025-07-27 02:06:01,515 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 04:06:37] 2025-07-27 02:06:01,515 | INFO     | log transfer has been attempted: DONE
[2025-07-27 04:06:37] 2025-07-27 02:06:01,515 | INFO     | job 6745135759 has finished - writing final server update
[2025-07-27 04:06:37] 2025-07-27 02:06:01,515 | INFO     | total number of processed events: 400 (read)
[2025-07-27 04:06:37] 2025-07-27 02:06:01,516 | INFO     | executing command: lscpu
[2025-07-27 04:06:37] 2025-07-27 02:06:01,539 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 04:06:37] 2025-07-27 02:06:02,801 | INFO     | monitor loop #287: job 0:6745135759 is in state 'finished'
[2025-07-27 04:06:37] 2025-07-27 02:06:02,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:06:37] 2025-07-27 02:06:05,305 | INFO     | monitor loop #288: job 0:6745135759 is in state 'finished'
[2025-07-27 04:06:37] 2025-07-27 02:06:05,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:06:37] 2025-07-27 02:06:06,263 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 04:06:37] 2025-07-27 02:06:06,277 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 3123.8683333333333
[2025-07-27 04:06:37] 2025-07-27 02:06:06,278 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745135759/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 04:06:37] 2025-07-27 02:06:06,278 | INFO     | extracted standard info from prmon json
[2025-07-27 04:06:37] 2025-07-27 02:06:06,278 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 04:06:37] 2025-07-27 02:06:06,278 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 04:06:37] 2025-07-27 02:06:06,278 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 04:06:37] 2025-07-27 02:06:06,278 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 04:06:37] 2025-07-27 02:06:06,279 | INFO     | fitting pss+swap vs Time
[2025-07-27 04:06:37] 2025-07-27 02:06:06,279 | INFO     | sum of square deviations: 48810217.5
[2025-07-27 04:06:37] 2025-07-27 02:06:06,279 | INFO     | sum of deviations: -3190329645.9999995
[2025-07-27 04:06:37] 2025-07-27 02:06:06,279 | INFO     | mean x: 1753580192.5
[2025-07-27 04:06:37] 2025-07-27 02:06:06,279 | INFO     | mean y: 2518286.185185185
[2025-07-27 04:06:37] 2025-07-27 02:06:06,279 | INFO     | -- intersect: 114619890658.49916
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | intersect: 114619890658.49916
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | chi2: 0.09402771469498902
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | -- intersect: 114619890658.49916
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | current memory leak: -65.36 B/s (using 54 data points, chi2=0.09)
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | could have reported an average CPU frequency of 3252 MHz (6 samples)
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | ..............................
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | . Timing measurements:
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | . get job = 0 s
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | . initial setup = 0 s
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | . payload setup = 6 s
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | . stage-in = 0 s
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | . payload execution = 3686 s
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | . stage-out = 0 s
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | . log creation = 0 s
[2025-07-27 04:06:37] 2025-07-27 02:06:06,280 | INFO     | ..............................
[2025-07-27 04:06:37] 2025-07-27 02:06:06,322 | INFO     | 
[2025-07-27 04:06:37] 2025-07-27 02:06:06,322 | INFO     | job summary report
[2025-07-27 04:06:37] 2025-07-27 02:06:06,322 | INFO     | --------------------------------------------------
[2025-07-27 04:06:37] 2025-07-27 02:06:06,322 | INFO     | PanDA job id: 6745135759
[2025-07-27 04:06:37] 2025-07-27 02:06:06,322 | INFO     | task id: 45743349
[2025-07-27 04:06:37] 2025-07-27 02:06:06,322 | INFO     | errors: (none)
[2025-07-27 04:06:37] 2025-07-27 02:06:06,322 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 04:06:37] 2025-07-27 02:06:06,322 | INFO     | pilot state: finished 
[2025-07-27 04:06:37] 2025-07-27 02:06:06,322 | INFO     | transexitcode: 0
[2025-07-27 04:06:37] 2025-07-27 02:06:06,322 | INFO     | exeerrorcode: 0
[2025-07-27 04:06:37] 2025-07-27 02:06:06,322 | INFO     | exeerrordiag: 
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | exitcode: 0
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | exitmsg: OK
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | cpuconsumptiontime: 21118 s
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | nevents: 400
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | neventsw: 0
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | pid: 4037576
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | pgrp: 4037576
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | corecount: 6
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | event service: False
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | sizes: {0: 2397303, 1: 2397502, 5: 2397764, 11: 2397820, 3696: 2432669, 3697: 2432669, 3704: 2432991}
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | --------------------------------------------------
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | 
[2025-07-27 04:06:37] 2025-07-27 02:06:06,323 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 04:06:37] 2025-07-27 02:06:06,333 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,333 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,333 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,333 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,333 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,333 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,333 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,333 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,333 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,334 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 04:06:37] 2025-07-27 02:06:06,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,334 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 04:06:37] 2025-07-27 02:06:06,334 | INFO     | job 6745135759 has completed (purged errors)
[2025-07-27 04:06:37] 2025-07-27 02:06:06,334 | INFO     | overall cleanup function is called
[2025-07-27 04:06:37] 2025-07-27 02:06:07,340 | INFO     | --- collectZombieJob: --- 10, [4037576]
[2025-07-27 04:06:37] 2025-07-27 02:06:07,341 | INFO     | zombie collector waiting for pid 4037576
[2025-07-27 04:06:37] 2025-07-27 02:06:07,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 04:06:37] 2025-07-27 02:06:07,341 | INFO     | collected zombie processes
[2025-07-27 04:06:37] 2025-07-27 02:06:07,341 | INFO     | will attempt to kill all subprocesses of pid=4037576
[2025-07-27 04:06:37] 2025-07-27 02:06:07,379 | INFO     | process IDs to be killed: [4037576] (in reverse order)
[2025-07-27 04:06:37] 2025-07-27 02:06:07,399 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 04:06:37] 2025-07-27 02:06:07,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 04:06:37] 2025-07-27 02:06:07,400 | INFO     | did not find any defunct processes belonging to 4037576
[2025-07-27 04:06:37] 2025-07-27 02:06:07,401 | INFO     | did not find any defunct processes belonging to 4037576
[2025-07-27 04:06:37] 2025-07-27 02:06:07,401 | INFO     | ready for new job
[2025-07-27 04:06:37] 2025-07-27 02:06:07,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 04:06:37] 2025-07-27 02:06:07,402 | INFO     | ***************************************
[2025-07-27 04:06:37] 2025-07-27 02:06:07,402 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 04:06:37] 2025-07-27 02:06:07,402 | INFO     | ***************************************
[2025-07-27 04:06:37] 2025-07-27 02:06:07,402 | INFO     | 
[2025-07-27 04:06:37] 2025-07-27 02:06:07,415 | INFO     | architecture information:
[2025-07-27 04:06:37] 2025-07-27 02:06:07,416 | INFO     | executing command: cat /etc/os-release
[2025-07-27 04:06:37] 2025-07-27 02:06:07,421 | INFO     | cat /etc/os-release:
[2025-07-27 04:06:37] NAME="CentOS Linux"
[2025-07-27 04:06:37] VERSION="7 (Core)"
[2025-07-27 04:06:37] ID="centos"
[2025-07-27 04:06:37] ID_LIKE="rhel fedora"
[2025-07-27 04:06:37] VERSION_ID="7"
[2025-07-27 04:06:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 04:06:37] ANSI_COLOR="0;31"
[2025-07-27 04:06:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 04:06:37] HOME_URL="https://www.centos.org/"
[2025-07-27 04:06:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 04:06:37] 
[2025-07-27 04:06:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 04:06:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 04:06:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 04:06:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 04:06:37] 
[2025-07-27 04:06:37] 2025-07-27 02:06:07,422 | INFO     | ***************************************
[2025-07-27 04:06:37] 2025-07-27 02:06:07,925 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 04:06:37] 2025-07-27 02:06:07,935 | INFO     | sufficient remaining disk space (112777494528 B)
[2025-07-27 04:06:37] 2025-07-27 02:06:07,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 04:06:37] 2025-07-27 02:06:07,935 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 04:06:37] 2025-07-27 02:06:07,935 | INFO     | update_server=False
[2025-07-27 04:06:37] 2025-07-27 02:06:07,935 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 04:06:37] 2025-07-27 02:06:07,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:06:37] 2025-07-27 02:06:07,940 | INFO     | all data control threads have been joined
[2025-07-27 04:06:37] 2025-07-27 02:06:08,364 | INFO     | all payload control threads have been joined
[2025-07-27 04:06:37] 2025-07-27 02:06:08,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:06:37] 2025-07-27 02:06:08,819 | INFO     | aborting loop
[2025-07-27 04:06:37] 2025-07-27 02:06:08,941 | INFO     | [job] retrieve thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:08,942 | INFO     | [job] queue monitor thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:08,942 | INFO     | [data] control thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:08,967 | INFO     | all job control threads have been joined
[2025-07-27 04:06:37] 2025-07-27 02:06:09,054 | INFO     | [payload] validate_post thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:09,309 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 04:06:37] 2025-07-27 02:06:09,328 | INFO     | [payload] failed_post thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:09,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 04:06:37] 2025-07-27 02:06:09,370 | INFO     | [payload] control thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:09,783 | INFO     | [job] validate thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:09,825 | INFO     | [job] job monitor thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:09,876 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:09,924 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:09,928 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:09,973 | INFO     | [job] control thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:10,343 | INFO     | [data] copytool_in thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:11,316 | INFO     | [data] copytool_out thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:13,336 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:18,272 | INFO     | job.realtimelogging is not enabled
[2025-07-27 04:06:37] 2025-07-27 02:06:19,278 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 04:06:37] 2025-07-27 02:06:19,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279893030720)>', '<ExcThread(monitor, started 140279495501568)>']
[2025-07-27 04:06:37] 2025-07-27 02:06:24,317 | INFO     | all workflow threads have been joined
[2025-07-27 04:06:37] 2025-07-27 02:06:24,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 04:06:37] 2025-07-27 02:06:24,318 | INFO     | traces error code: 0
[2025-07-27 04:06:37] 2025-07-27 02:06:24,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 04:06:37] 2025-07-27 02:06:37,614 | INFO     | PID=4030545 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 04:06:37] 2025-07-27 02:06:37,615 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 04:06:37] 2025-07-27 02:06:37,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 04:06:37] 2025-07-27 02:06:37,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 04:06:37] 2025-07-27 02:06:37,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 04:06:37] 2025-07-27 02:06:37,615 | INFO     | [monitor] control thread has ended
[2025-07-27 04:06:37] 2025-07-27 02:06:37,669 [wrapper] ==== pilot stdout END ====
[2025-07-27 04:06:37] 2025-07-27 02:06:37,671 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 04:06:37] 2025-07-27 02:06:37,672 [wrapper] pilotpid: 4030545
[2025-07-27 04:06:37] 2025-07-27 02:06:37,673 [wrapper] Pilot exit status: 0
[2025-07-27 04:06:37] 2025-07-27 02:06:37,679 [wrapper] pandaids: 6745135759
[2025-07-27 04:06:37] 2025-07-27 02:06:37,691 [wrapper] cleanup supervisor_pilot 4049964 4030546
[2025-07-27 04:06:37] 2025-07-27 02:06:37,692 [wrapper] Test setup, not cleaning
[2025-07-27 04:06:37] 2025-07-27 02:06:37,693 [wrapper] apfmon messages muted
[2025-07-27 04:06:37] 2025-07-27 02:06:37,695 [wrapper] ==== wrapper stdout END ====
[2025-07-27 04:06:37] 2025-07-27 02:06:37,696 [wrapper] ==== wrapper stderr END ====
[2025-07-27 04:06:37]  *** Error codes and diagnostics ***
[2025-07-27 04:06:37]     "exeErrorCode": 0,
[2025-07-27 04:06:37]     "exeErrorDiag": "",
[2025-07-27 04:06:37]     "pilotErrorCode": 0,
[2025-07-27 04:06:37]     "pilotErrorDiag": "",
[2025-07-27 04:06:37]  *** Listing of results directory ***
[2025-07-27 04:06:37] total 352004
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc    530466 Jul 26 13:39 pilot3.tar.gz
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc      5112 Jul 26 13:42 queuedata.json
[2025-07-27 04:06:37] -rwx------ 1 boinc boinc     36292 Jul 26 13:42 runpilot2-wrapper.sh
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc       100 Jul 27 03:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 04:06:37] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 03:03 run_atlas
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc       105 Jul 27 03:03 job.xml
[2025-07-27 04:06:37] -rw-r--r-- 2 boinc boinc 145831876 Jul 27 03:03 EVNT.45743347._002133.pool.root.1
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc      6517 Jul 27 03:03 init_data.xml
[2025-07-27 04:06:37] -rw-r--r-- 2 boinc boinc     15095 Jul 27 03:03 start_atlas.sh
[2025-07-27 04:06:37] drwxrwx--x 2 boinc boinc        68 Jul 27 03:03 shared
[2025-07-27 04:06:37] -rw-r--r-- 2 boinc boinc    542896 Jul 27 03:03 input.tar.gz
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc         0 Jul 27 03:03 boinc_lockfile
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc      2562 Jul 27 03:04 pandaJob.out
[2025-07-27 04:06:37] -rw------- 1 boinc boinc    980117 Jul 27 03:04 agis_schedconf.cvmfs.json
[2025-07-27 04:06:37] -rw------- 1 boinc boinc   1593052 Jul 27 03:04 agis_ddmendpoints.agis.ALL.json
[2025-07-27 04:06:37] drwx------ 4 boinc boinc      4096 Jul 27 03:04 pilot3
[2025-07-27 04:06:37] -rw------- 1 boinc boinc 209465185 Jul 27 04:05 HITS.45743349._037344.pool.root.1
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc       529 Jul 27 04:05 boinc_task_state.xml
[2025-07-27 04:06:37] -rw------- 1 boinc boinc      1015 Jul 27 04:05 memory_monitor_summary.json
[2025-07-27 04:06:37] -rw------- 1 boinc boinc    266255 Jul 27 04:05 log.45743349._037344.job.log.tgz.1
[2025-07-27 04:06:37] -rw------- 1 boinc boinc      7767 Jul 27 04:06 heartbeat.json
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc      8192 Jul 27 04:06 boinc_mmap_file
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc        27 Jul 27 04:06 wrapper_checkpoint.txt
[2025-07-27 04:06:37] -rw------- 1 boinc boinc       747 Jul 27 04:06 pilotlog.txt
[2025-07-27 04:06:37] -rw------- 1 boinc boinc        95 Jul 27 04:06 pilot_heartbeat.json
[2025-07-27 04:06:37] -rw------- 1 boinc boinc    377249 Jul 27 04:06 log.45743349._037344.job.log.1
[2025-07-27 04:06:37] -rw------- 1 boinc boinc       357 Jul 27 04:06 output.list
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc       620 Jul 27 04:06 runtime_log
[2025-07-27 04:06:37] -rw------- 1 boinc boinc    665600 Jul 27 04:06 result.tar.gz
[2025-07-27 04:06:37] -rw------- 1 boinc boinc       650 Jul 27 04:06 wz4MDmqTsz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIh0KDmezdfWo.diag
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc      8673 Jul 27 04:06 runtime_log.err
[2025-07-27 04:06:37] -rw-r--r-- 1 boinc boinc     21864 Jul 27 04:06 stderr.txt
[2025-07-27 04:06:37] HITS file was successfully produced:
[2025-07-27 04:06:37] -rw------- 1 boinc boinc 209465185 Jul 27 04:05 shared/HITS.pool.root.1
[2025-07-27 04:06:37]  *** Contents of shared directory: ***
[2025-07-27 04:06:37] total 348172
[2025-07-27 04:06:37] -rw-r--r-- 2 boinc boinc 145831876 Jul 27 03:03 ATLAS.root_0
[2025-07-27 04:06:37] -rw-r--r-- 2 boinc boinc     15095 Jul 27 03:03 start_atlas.sh
[2025-07-27 04:06:37] -rw-r--r-- 2 boinc boinc    542896 Jul 27 03:03 input.tar.gz
[2025-07-27 04:06:37] -rw------- 1 boinc boinc 209465185 Jul 27 04:05 HITS.pool.root.1
[2025-07-27 04:06:37] -rw------- 1 boinc boinc    665600 Jul 27 04:06 result.tar.gz
04:06:39 (4026927): run_atlas exited; CPU time 21131.786541
04:06:39 (4026927): called boinc_finish(0)

</stderr_txt>
]]>

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