Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:23:55 (18116): wrapper (7.7.26015): starting
13:23:55 (18116): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 13:23:55] Arguments: --nthreads 8
[2025-07-27 13:23:55] Threads: 8
[2025-07-27 13:23:55] Checking for CVMFS
[2025-07-27 13:23:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 13:23:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 13:23:57] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 13:23:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 13:23:58] 2.11.2.0 32728 109452 108964 148811 1 109 24574379 25165824 4098 130560 0 81674366 99.890 45882364 3382 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 13:23:58] CVMFS is ok
[2025-07-27 13:23:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:23:58] Checking for apptainer binary...
[2025-07-27 13:23:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 13:23:58] Running /usr/bin/apptainer --version
[2025-07-27 13:23:58] apptainer version 1.3.2-1.el7
[2025-07-27 13:23:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:23:59] cg-vwn337.simple-grid.lan
[2025-07-27 13:23:59] apptainer works
[2025-07-27 13:23:59] Set ATHENA_PROC_NUMBER=8
[2025-07-27 13:23:59] Set ATHENA_CORE_NUMBER=8
[2025-07-27 13:23:59] Starting ATLAS job with PandaID=6745229242
[2025-07-27 13:23:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:46:56]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:46:56] 2025-07-27 16:10:51,193 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:46:56] 2025-07-27 16:10:51,194 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:46:56] 2025-07-27 16:10:51,200 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:46:56] 2025-07-27 16:10:51,201 | INFO     | sum of square deviations: 6806862510.0
[2025-07-27 18:46:56] 2025-07-27 16:10:51,204 | INFO     | sum of deviations: -47006880752.5
[2025-07-27 18:46:56] 2025-07-27 16:10:51,204 | INFO     | mean x: 1753624034.5
[2025-07-27 18:46:56] 2025-07-27 16:10:51,204 | INFO     | mean y: 2507040.2035714285
[2025-07-27 18:46:56] 2025-07-27 16:10:51,204 | INFO     | -- intersect: 12112696683.869438
[2025-07-27 18:46:56] 2025-07-27 16:10:51,204 | INFO     | intersect: 12112696683.869438
[2025-07-27 18:46:56] 2025-07-27 16:10:51,205 | INFO     | chi2: 3.718003328594917
[2025-07-27 18:46:56] 2025-07-27 16:10:51,206 | INFO     | sum of square deviations: 6448679050.0
[2025-07-27 18:46:56] 2025-07-27 16:10:51,226 | INFO     | sum of deviations: -8321058068.0000105
[2025-07-27 18:46:56] 2025-07-27 16:10:51,227 | INFO     | mean x: 1753623882.0
[2025-07-27 18:46:56] 2025-07-27 16:10:51,227 | INFO     | mean y: 2523335.2581818183
[2025-07-27 18:46:56] 2025-07-27 16:10:51,227 | INFO     | -- intersect: 2265313286.2565336
[2025-07-27 18:46:56] 2025-07-27 16:10:51,227 | INFO     | intersect: 2265313286.2565336
[2025-07-27 18:46:56] 2025-07-27 16:10:51,228 | INFO     | chi2: 2.0789223452203918
[2025-07-27 18:46:56] 2025-07-27 16:10:51,228 | INFO     | current chi2=2.0789223452203918 (change=44.08497891243029 %)
[2025-07-27 18:46:56] 2025-07-27 16:10:51,228 | INFO     | sum of square deviations: 6103286527.5
[2025-07-27 18:46:56] 2025-07-27 16:10:51,231 | INFO     | sum of deviations: -8576714862.999997
[2025-07-27 18:46:56] 2025-07-27 16:10:51,231 | INFO     | mean x: 1753623729.5
[2025-07-27 18:46:56] 2025-07-27 16:10:51,231 | INFO     | mean y: 2523222.422222222
[2025-07-27 18:46:56] 2025-07-27 16:10:51,232 | INFO     | -- intersect: 2466823503.450137
[2025-07-27 18:46:56] 2025-07-27 16:10:51,232 | INFO     | intersect: 2466823503.450137
[2025-07-27 18:46:56] 2025-07-27 16:10:51,232 | INFO     | chi2: 2.0777103312670917
[2025-07-27 18:46:56] 2025-07-27 16:10:51,232 | INFO     | current chi2=2.0777103312670917 (change=0.05830010707646577 %)
[2025-07-27 18:46:56] 2025-07-27 16:10:51,232 | INFO     | right removable region: 269
[2025-07-27 18:46:56] 2025-07-27 16:10:51,233 | INFO     | sum of square deviations: 6448679050.0
[2025-07-27 18:46:56] 2025-07-27 16:10:51,236 | INFO     | sum of deviations: -100129136432.99998
[2025-07-27 18:46:56] 2025-07-27 16:10:51,236 | INFO     | mean x: 1753624187.0
[2025-07-27 18:46:56] 2025-07-27 16:10:51,236 | INFO     | mean y: 2529519.1672727275
[2025-07-27 18:46:56] 2025-07-27 16:10:51,236 | INFO     | -- intersect: 27231187374.65966
[2025-07-27 18:46:56] 2025-07-27 16:10:51,236 | INFO     | intersect: 27231187374.65966
[2025-07-27 18:46:56] 2025-07-27 16:10:51,237 | INFO     | chi2: 1.936701507697228
[2025-07-27 18:46:56] 2025-07-27 16:10:51,237 | INFO     | current chi2=1.936701507697228 (change=47.910172839217616 %)
[2025-07-27 18:46:56] 2025-07-27 16:10:51,245 | INFO     | sum of square deviations: 6103286527.5
[2025-07-27 18:46:56] 2025-07-27 16:10:51,248 | INFO     | sum of deviations: -98425274337.5
[2025-07-27 18:46:56] 2025-07-27 16:10:51,248 | INFO     | mean x: 1753624339.5
[2025-07-27 18:46:56] 2025-07-27 16:10:51,248 | INFO     | mean y: 2528743.3074074076
[2025-07-27 18:46:56] 2025-07-27 16:10:51,248 | INFO     | -- intersect: 28282530988.410053
[2025-07-27 18:46:56] 2025-07-27 16:10:51,248 | INFO     | intersect: 28282530988.410053
[2025-07-27 18:46:56] 2025-07-27 16:10:51,249 | INFO     | chi2: 1.922685384497865
[2025-07-27 18:46:56] 2025-07-27 16:10:51,249 | INFO     | current chi2=1.922685384497865 (change=0.7237110697573824 %)
[2025-07-27 18:46:56] 2025-07-27 16:10:51,249 | INFO     | left removable region: 20
[2025-07-27 18:46:56] 2025-07-27 16:10:51,255 | INFO     | sum of square deviations: 4787066500.0
[2025-07-27 18:46:56] 2025-07-27 16:10:51,257 | INFO     | sum of deviations: -43581030198.0
[2025-07-27 18:46:56] 2025-07-27 16:10:51,258 | INFO     | mean x: 1753624309.0
[2025-07-27 18:46:56] 2025-07-27 16:10:51,258 | INFO     | mean y: 2538402.1044176705
[2025-07-27 18:46:56] 2025-07-27 16:10:51,258 | INFO     | -- intersect: 15967379075.714422
[2025-07-27 18:46:56] 2025-07-27 16:10:51,258 | INFO     | intersect: 15967379075.714422
[2025-07-27 18:46:56] 2025-07-27 16:10:51,259 | INFO     | chi2: 0.20936677653255995
[2025-07-27 18:46:56] 2025-07-27 16:10:51,259 | INFO     | -- intersect: 15967379075.714422
[2025-07-27 18:46:56] 2025-07-27 16:10:51,259 | INFO     | current memory leak: -9.10 B/s (using 249 data points, chi2=0.21)
[2025-07-27 18:46:56] 2025-07-27 16:10:51,260 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 18:46:56] 2025-07-27 16:10:51,260 | INFO     | ..............................
[2025-07-27 18:46:56] 2025-07-27 16:10:51,260 | INFO     | . Timing measurements:
[2025-07-27 18:46:56] 2025-07-27 16:10:51,260 | INFO     | . get job = 0 s
[2025-07-27 18:46:56] 2025-07-27 16:10:51,260 | INFO     | . initial setup = 2 s
[2025-07-27 18:46:56] 2025-07-27 16:10:51,260 | INFO     | . payload setup = 14 s
[2025-07-27 18:46:56] 2025-07-27 16:10:51,260 | INFO     | . stage-in = 0 s
[2025-07-27 18:46:56] 2025-07-27 16:10:51,260 | INFO     | . payload execution = 17050 s
[2025-07-27 18:46:56] 2025-07-27 16:10:51,261 | INFO     | . stage-out = 3 s
[2025-07-27 18:46:56] 2025-07-27 16:10:51,261 | INFO     | . log creation = 1 s
[2025-07-27 18:46:56] 2025-07-27 16:10:51,261 | INFO     | ..............................
[2025-07-27 18:46:56] 2025-07-27 16:10:51,436 | INFO     | 
[2025-07-27 18:46:56] 2025-07-27 16:10:51,437 | INFO     | job summary report
[2025-07-27 18:46:56] 2025-07-27 16:10:51,437 | INFO     | --------------------------------------------------
[2025-07-27 18:46:56] 2025-07-27 16:10:51,437 | INFO     | PanDA job id: 6745229242
[2025-07-27 18:46:56] 2025-07-27 16:10:51,437 | INFO     | task id: 45743349
[2025-07-27 18:46:56] 2025-07-27 16:10:51,437 | INFO     | errors: (none)
[2025-07-27 18:46:56] 2025-07-27 16:10:51,437 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:46:56] 2025-07-27 16:10:51,437 | INFO     | pilot state: finished 
[2025-07-27 18:46:56] 2025-07-27 16:10:51,437 | INFO     | transexitcode: 0
[2025-07-27 18:46:56] 2025-07-27 16:10:51,437 | INFO     | exeerrorcode: 0
[2025-07-27 18:46:56] 2025-07-27 16:10:51,437 | INFO     | exeerrordiag: 
[2025-07-27 18:46:56] 2025-07-27 16:10:51,438 | INFO     | exitcode: 0
[2025-07-27 18:46:56] 2025-07-27 16:10:51,438 | INFO     | exitmsg: OK
[2025-07-27 18:46:56] 2025-07-27 16:10:51,438 | INFO     | cpuconsumptiontime: 64947 s
[2025-07-27 18:46:56] 2025-07-27 16:10:51,438 | INFO     | nevents: 400
[2025-07-27 18:46:56] 2025-07-27 16:10:51,438 | INFO     | neventsw: 0
[2025-07-27 18:46:56] 2025-07-27 16:10:51,438 | INFO     | pid: 28594
[2025-07-27 18:46:56] 2025-07-27 16:10:51,438 | INFO     | pgrp: 28594
[2025-07-27 18:46:56] 2025-07-27 16:10:51,438 | INFO     | corecount: 8
[2025-07-27 18:46:56] 2025-07-27 16:10:51,438 | INFO     | event service: False
[2025-07-27 18:46:56] 2025-07-27 16:10:51,438 | INFO     | sizes: {0: 2397248, 1: 2397503, 2: 2397503, 8: 2397793, 12: 2397821, 17069: 2429226, 17073: 2438280, 17168: 2438418}
[2025-07-27 18:46:56] 2025-07-27 16:10:51,438 | INFO     | --------------------------------------------------
[2025-07-27 18:46:56] 2025-07-27 16:10:51,439 | INFO     | 
[2025-07-27 18:46:56] 2025-07-27 16:10:51,439 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-07-27 18:46:56] 2025-07-27 16:10:52,045 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,046 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,046 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,046 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,046 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,047 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,047 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,047 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,047 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,047 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,047 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:46:56] 2025-07-27 16:10:52,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,048 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:46:56] 2025-07-27 16:10:52,048 | INFO     | job 6745229242 has completed (purged errors)
[2025-07-27 18:46:56] 2025-07-27 16:10:52,048 | INFO     | overall cleanup function is called
[2025-07-27 18:46:56] 2025-07-27 16:10:53,056 | INFO     | --- collectZombieJob: --- 10, [28594]
[2025-07-27 18:46:56] 2025-07-27 16:10:53,057 | INFO     | zombie collector waiting for pid 28594
[2025-07-27 18:46:56] 2025-07-27 16:10:53,057 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:46:56] 2025-07-27 16:10:53,057 | INFO     | collected zombie processes
[2025-07-27 18:46:56] 2025-07-27 16:10:53,057 | INFO     | will attempt to kill all subprocesses of pid=28594
[2025-07-27 18:46:56] 2025-07-27 16:10:53,204 | INFO     | process IDs to be killed: [28594] (in reverse order)
[2025-07-27 18:46:56] 2025-07-27 16:10:54,329 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:46:56] 2025-07-27 16:10:54,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:46:56] 2025-07-27 16:10:54,334 | INFO     | did not find any defunct processes belonging to 28594
[2025-07-27 18:46:56] 2025-07-27 16:10:54,337 | INFO     | did not find any defunct processes belonging to 28594
[2025-07-27 18:46:56] 2025-07-27 16:10:54,338 | INFO     | ready for new job
[2025-07-27 18:46:56] 2025-07-27 16:10:54,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:46:56] 2025-07-27 16:10:54,340 | INFO     | ***************************************
[2025-07-27 18:46:56] 2025-07-27 16:10:54,340 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:46:56] 2025-07-27 16:10:54,340 | INFO     | ***************************************
[2025-07-27 18:46:56] 2025-07-27 16:10:54,340 | INFO     | 
[2025-07-27 18:46:56] 2025-07-27 16:10:54,341 | INFO     | pilot is running in a VM
[2025-07-27 18:46:56] 2025-07-27 16:10:54,341 | INFO     | architecture information:
[2025-07-27 18:46:56] 2025-07-27 16:10:54,351 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:46:56] 2025-07-27 16:10:54,590 | INFO     | cat /etc/os-release:
[2025-07-27 18:46:56] NAME="CentOS Linux"
[2025-07-27 18:46:56] VERSION="7 (Core)"
[2025-07-27 18:46:56] ID="centos"
[2025-07-27 18:46:56] ID_LIKE="rhel fedora"
[2025-07-27 18:46:56] VERSION_ID="7"
[2025-07-27 18:46:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:46:56] ANSI_COLOR="0;31"
[2025-07-27 18:46:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:46:56] HOME_URL="https://www.centos.org/"
[2025-07-27 18:46:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:46:56] 
[2025-07-27 18:46:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:46:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:46:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:46:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:46:56] 
[2025-07-27 18:46:56] 2025-07-27 16:10:54,590 | INFO     | ***************************************
[2025-07-27 18:46:56] 2025-07-27 16:10:55,094 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-07-27 18:46:56] 2025-07-27 16:10:55,228 | INFO     | sufficient remaining disk space (496526950400 B)
[2025-07-27 18:46:56] 2025-07-27 16:10:55,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:46:56] 2025-07-27 16:10:55,229 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:46:56] 2025-07-27 16:10:55,229 | INFO     | update_server=False
[2025-07-27 18:46:56] 2025-07-27 16:10:55,229 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:46:56] 2025-07-27 16:10:55,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:46:56] 2025-07-27 16:10:55,230 | INFO     | aborting loop
[2025-07-27 18:46:56] 2025-07-27 16:10:55,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:46:56] 2025-07-27 16:10:55,381 | INFO     | all job control threads have been joined
[2025-07-27 18:46:56] 2025-07-27 16:10:56,235 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:56,240 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:56,314 | INFO     | all data control threads have been joined
[2025-07-27 18:46:56] 2025-07-27 16:10:56,387 | INFO     | [job] control thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:56,397 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:56,438 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:56,443 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:56,458 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:46:56] 2025-07-27 16:10:56,529 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:56,630 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:56,721 | INFO     | all payload control threads have been joined
[2025-07-27 18:46:56] 2025-07-27 16:10:56,774 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:57,239 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:57,242 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:57,323 | INFO     | [data] control thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:57,352 | INFO     | [job] validate thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:57,465 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:10:57,651 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:46:56] 2025-07-27 16:10:57,728 | INFO     | [payload] control thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:11:01,659 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:46:56] 2025-07-27 16:11:03,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054735034176)>', '<ExcThread(monitor, started 140054294939392)>']
[2025-07-27 18:46:56] 2025-07-27 16:11:08,299 | INFO     | all workflow threads have been joined
[2025-07-27 18:46:56] 2025-07-27 16:11:08,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:46:56] 2025-07-27 16:11:08,300 | INFO     | traces error code: 0
[2025-07-27 18:46:56] 2025-07-27 16:11:08,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:46:56] 2025-07-27 16:11:23,880 | INFO     | PID=22022 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 18:46:56] 2025-07-27 16:11:23,881 | INFO     | .. there are 9 such processes running
[2025-07-27 18:46:56] 2025-07-27 16:11:23,882 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:46:56] 2025-07-27 16:11:23,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:46:56] 2025-07-27 16:11:23,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:46:56] 2025-07-27 16:11:23,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:46:56] 2025-07-27 16:11:23,883 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 18:46:56] 2025-07-27 16:11:23,883 | INFO     | [monitor] control thread has ended
[2025-07-27 18:46:56] 2025-07-27 16:11:24,163 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:46:56] 2025-07-27 16:11:24,268 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:46:56] 2025-07-27 16:11:24,326 [wrapper] pilotpid: 22022
[2025-07-27 18:46:56] 2025-07-27 16:11:24,367 [wrapper] Pilot exit status: 0
[2025-07-27 18:46:56] 2025-07-27 16:11:24,746 [wrapper] pandaids: 6745229242
[2025-07-27 18:46:56] 2025-07-27 16:11:25,633 [wrapper] cleanup supervisor_pilot 22394 22023
[2025-07-27 18:46:56] 2025-07-27 16:11:25,717 [wrapper] Test setup, not cleaning
[2025-07-27 18:46:56] 2025-07-27 16:11:25,775 [wrapper] apfmon messages muted
[2025-07-27 18:46:56] 2025-07-27 16:11:25,863 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:46:56] 2025-07-27 16:11:25,958 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:46:56]  *** Error codes and diagnostics ***
[2025-07-27 18:46:56]     "exeErrorCode": 0,
[2025-07-27 18:46:56]     "exeErrorDiag": "",
[2025-07-27 18:46:56]     "pilotErrorCode": 0,
[2025-07-27 18:46:56]     "pilotErrorDiag": "",
[2025-07-27 18:46:56]  *** Listing of results directory ***
[2025-07-27 18:46:56] total 406204
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc    530466 Jul 26 16:04 pilot3.tar.gz
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc      5112 Jul 26 16:20 queuedata.json
[2025-07-27 18:46:56] -rwx------. 1 boinc boinc     36292 Jul 26 16:20 runpilot2-wrapper.sh
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc       100 Jul 27 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:46:56] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 13:23 run_atlas
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc       105 Jul 27 13:23 job.xml
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc      6390 Jul 27 13:23 init_data.xml
[2025-07-27 18:46:56] -rw-r--r--. 2 boinc boinc 191210615 Jul 27 13:23 EVNT.45743347._002244.pool.root.1
[2025-07-27 18:46:56] -rw-r--r--. 2 boinc boinc     15095 Jul 27 13:23 start_atlas.sh
[2025-07-27 18:46:56] drwxrwx--x. 2 boinc boinc        68 Jul 27 13:23 shared
[2025-07-27 18:46:56] -rw-r--r--. 2 boinc boinc    542901 Jul 27 13:23 input.tar.gz
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc         0 Jul 27 13:23 boinc_lockfile
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc      2563 Jul 27 13:23 pandaJob.out
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc    980109 Jul 27 13:24 agis_schedconf.cvmfs.json
[2025-07-27 18:46:56] drwx------. 4 boinc boinc      4096 Jul 27 13:24 pilot3
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc 217087377 Jul 27 18:07 HITS.45743349._039313.pool.root.1
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc       531 Jul 27 18:08 boinc_task_state.xml
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc      1021 Jul 27 18:09 memory_monitor_summary.json
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc   1593052 Jul 27 18:09 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc    420482 Jul 27 18:09 log.45743349._039313.job.log.tgz.1
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc      7793 Jul 27 18:10 heartbeat.json
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc        95 Jul 27 18:11 pilot_heartbeat.json
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc       890 Jul 27 18:11 pilotlog.txt
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc   1476679 Jul 27 18:11 log.45743349._039313.job.log.1
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc       357 Jul 27 18:11 output.list
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc       620 Jul 27 18:11 runtime_log
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc   1914880 Jul 27 18:11 result.tar.gz
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc      8660 Jul 27 18:11 runtime_log.err
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc       657 Jul 27 18:11 PTBNDmbwuz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJu0KDm3NwjQm.diag
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc      8192 Jul 27 18:46 boinc_mmap_file
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc        28 Jul 27 18:46 wrapper_checkpoint.txt
[2025-07-27 18:46:56] -rw-r--r--. 1 boinc boinc     20562 Jul 27 18:46 stderr.txt
[2025-07-27 18:46:56] HITS file was successfully produced:
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc 217087377 Jul 27 18:07 shared/HITS.pool.root.1
[2025-07-27 18:46:56]  *** Contents of shared directory: ***
[2025-07-27 18:46:56] total 401152
[2025-07-27 18:46:56] -rw-r--r--. 2 boinc boinc 191210615 Jul 27 13:23 ATLAS.root_0
[2025-07-27 18:46:56] -rw-r--r--. 2 boinc boinc     15095 Jul 27 13:23 start_atlas.sh
[2025-07-27 18:46:56] -rw-r--r--. 2 boinc boinc    542901 Jul 27 13:23 input.tar.gz
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc 217087377 Jul 27 18:07 HITS.pool.root.1
[2025-07-27 18:46:56] -rw-------. 1 boinc boinc   1914880 Jul 27 18:11 result.tar.gz
18:46:58 (18116): run_atlas exited; CPU time 65159.166924
18:46:58 (18116): called boinc_finish(0)

</stderr_txt>
]]>

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