Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:56:13 (404846): wrapper (7.7.26015): starting
10:56:13 (404846): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 10:56:13] Arguments: --nthreads 3
[2025-07-27 10:56:13] Threads: 3
[2025-07-27 10:56:13] Checking for CVMFS
[2025-07-27 10:56:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 10:56:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 10:56:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 10:56:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 10:56:13] 2.9.2.0 3466416 3993 84012 148805 3 57 35116599 36864000 0 130560 0 3026654 99.991 138117 1942 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 10:56:13] CVMFS is ok
[2025-07-27 10:56:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 10:56:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 10:56:13] Further information can be found at the LHC@home message board.
[2025-07-27 10:56:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 10:56:13] Checking for apptainer binary...
[2025-07-27 10:56:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 10:56:13] Running /usr/bin/apptainer --version
[2025-07-27 10:56:13] apptainer version 1.4.1-1.1
[2025-07-27 10:56:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 10:56:13] magicA252
[2025-07-27 10:56:13] apptainer works
[2025-07-27 10:56:13] Set ATHENA_PROC_NUMBER=3
[2025-07-27 10:56:13] Set ATHENA_CORE_NUMBER=3
[2025-07-27 10:56:13] Starting ATLAS job with PandaID=6745229141
[2025-07-27 10:56:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:28:11]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:28:11]  guid=06332d9d-f281-412c-8c86-c49862ea2525
[2025-07-27 12:28:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 12:28:11]  is_altstaged=None
[2025-07-27 12:28:11]  is_tar=False
[2025-07-27 12:28:11]  lfn=log.45743349._039212.job.log.tgz.1
[2025-07-27 12:28:11]  mtime=0
[2025-07-27 12:28:11]  protocol_id=None
[2025-07-27 12:28:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 12:28:11]  replicas=None
[2025-07-27 12:28:11]  scope=mc23_13p6TeV
[2025-07-27 12:28:11]  status=None
[2025-07-27 12:28:11]  status_code=0
[2025-07-27 12:28:11]  storage_token=
[2025-07-27 12:28:11]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745229141/log.45743349._039212.job.log.tgz.1
[2025-07-27 12:28:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/27/log.45743349._039212.job.log.tgz.1
[2025-07-27 12:28:11]  workdir=None
[2025-07-27 12:28:11] ]
[2025-07-27 12:28:11] 2025-07-27 10:27:33,955 | INFO     | transferring file log.45743349._039212.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745229141/log.45743349._039212.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 12:28:11] 2025-07-27 10:27:33,955 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745229141/log.45743349._039212.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0392
[2025-07-27 12:28:11] 2025-07-27 10:27:33,969 | INFO     | adding to output.list: log.45743349._039212.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/27/log.45743349._039212.job.log.tg
[2025-07-27 12:28:11] 2025-07-27 10:27:33,969 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 12:28:11] 2025-07-27 10:27:33,969 | INFO     | summary of transferred files:
[2025-07-27 12:28:11] 2025-07-27 10:27:33,969 | INFO     |  -- lfn=log.45743349._039212.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 12:28:11] 2025-07-27 10:27:33,970 | INFO     | stage-out finished correctly
[2025-07-27 12:28:11] 2025-07-27 10:27:34,747 | INFO     | monitor loop #422: job 0:6745229141 is in state 'finished'
[2025-07-27 12:28:11] 2025-07-27 10:27:34,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:28:11] 2025-07-27 10:27:36,821 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 12:28:11] 2025-07-27 10:27:36,852 | INFO     | job 6745229141 has state=finished
[2025-07-27 12:28:11] 2025-07-27 10:27:36,852 | INFO     | preparing for final server update for job 6745229141 in state='finished'
[2025-07-27 12:28:11] 2025-07-27 10:27:36,852 | INFO     | this job has now completed (state=finished)
[2025-07-27 12:28:11] 2025-07-27 10:27:36,853 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 12:28:11] 2025-07-27 10:27:36,853 | INFO     | log transfer has been attempted: DONE
[2025-07-27 12:28:11] 2025-07-27 10:27:36,853 | INFO     | job 6745229141 has finished - writing final server update
[2025-07-27 12:28:11] 2025-07-27 10:27:36,853 | INFO     | total number of processed events: 400 (read)
[2025-07-27 12:28:11] 2025-07-27 10:27:36,853 | INFO     | executing command: lscpu
[2025-07-27 12:28:11] 2025-07-27 10:27:36,866 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 12:28:11] 2025-07-27 10:27:37,250 | INFO     | monitor loop #423: job 0:6745229141 is in state 'finished'
[2025-07-27 12:28:11] 2025-07-27 10:27:37,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 12:28:11] 2025-07-27 10:27:39,181 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 12:28:11] 2025-07-27 10:27:39,182 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3794.3531666666663
[2025-07-27 12:28:11] 2025-07-27 10:27:39,183 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745229141/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 12:28:11] 2025-07-27 10:27:39,183 | INFO     | extracted standard info from prmon json
[2025-07-27 12:28:11] 2025-07-27 10:27:39,183 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 12:28:11] 2025-07-27 10:27:39,183 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 12:28:11] 2025-07-27 10:27:39,183 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 12:28:11] 2025-07-27 10:27:39,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 12:28:11] 2025-07-27 10:27:39,184 | INFO     | fitting pss+swap vs Time
[2025-07-27 12:28:11] 2025-07-27 10:27:39,184 | INFO     | sum of square deviations: 177275882.0
[2025-07-27 12:28:11] 2025-07-27 10:27:39,184 | INFO     | sum of deviations: -6146854344.0
[2025-07-27 12:28:11] 2025-07-27 10:27:39,184 | INFO     | mean x: 1753609405.0
[2025-07-27 12:28:11] 2025-07-27 10:27:39,184 | INFO     | mean y: 2389797.2168674697
[2025-07-27 12:28:11] 2025-07-27 10:27:39,184 | INFO     | -- intersect: 60806947457.257195
[2025-07-27 12:28:11] 2025-07-27 10:27:39,184 | INFO     | intersect: 60806947457.257195
[2025-07-27 12:28:11] 2025-07-27 10:27:39,184 | INFO     | chi2: 0.07180438724057267
[2025-07-27 12:28:11] 2025-07-27 10:27:39,184 | INFO     | -- intersect: 60806947457.257195
[2025-07-27 12:28:11] 2025-07-27 10:27:39,184 | INFO     | current memory leak: -34.67 B/s (using 83 data points, chi2=0.07)
[2025-07-27 12:28:11] 2025-07-27 10:27:39,184 | INFO     | could have reported an average CPU frequency of 3939 MHz (7 samples)
[2025-07-27 12:28:11] 2025-07-27 10:27:39,185 | INFO     | ..............................
[2025-07-27 12:28:11] 2025-07-27 10:27:39,185 | INFO     | . Timing measurements:
[2025-07-27 12:28:11] 2025-07-27 10:27:39,185 | INFO     | . get job = 0 s
[2025-07-27 12:28:11] 2025-07-27 10:27:39,185 | INFO     | . initial setup = 1 s
[2025-07-27 12:28:11] 2025-07-27 10:27:39,185 | INFO     | . payload setup = 3 s
[2025-07-27 12:28:11] 2025-07-27 10:27:39,185 | INFO     | . stage-in = 0 s
[2025-07-27 12:28:11] 2025-07-27 10:27:39,185 | INFO     | . payload execution = 5453 s
[2025-07-27 12:28:11] 2025-07-27 10:27:39,185 | INFO     | . stage-out = 0 s
[2025-07-27 12:28:11] 2025-07-27 10:27:39,185 | INFO     | . log creation = 0 s
[2025-07-27 12:28:11] 2025-07-27 10:27:39,185 | INFO     | ..............................
[2025-07-27 12:28:11] 2025-07-27 10:27:39,336 | INFO     | 
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | job summary report
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | --------------------------------------------------
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | PanDA job id: 6745229141
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | task id: 45743349
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | errors: (none)
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | pilot state: finished 
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | transexitcode: 0
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | exeerrorcode: 0
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | exeerrordiag: 
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | exitcode: 0
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | exitmsg: OK
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | cpuconsumptiontime: 15674 s
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | nevents: 400
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | neventsw: 0
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | pid: 414973
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | pgrp: 414973
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | corecount: 3
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | event service: False
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | sizes: {0: 2397478, 2: 2397740, 10: 2397768, 5460: 2424491, 5461: 2433495, 5464: 2433551, 5466: 2433873}
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | --------------------------------------------------
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | 
[2025-07-27 12:28:11] 2025-07-27 10:27:39,337 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 12:28:11] 2025-07-27 10:27:39,353 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,354 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:28:11] 2025-07-27 10:27:39,355 | INFO     | job 6745229141 has completed (purged errors)
[2025-07-27 12:28:11] 2025-07-27 10:27:39,355 | INFO     | overall cleanup function is called
[2025-07-27 12:28:11] 2025-07-27 10:27:40,361 | INFO     | --- collectZombieJob: --- 10, [414973]
[2025-07-27 12:28:11] 2025-07-27 10:27:40,361 | INFO     | zombie collector waiting for pid 414973
[2025-07-27 12:28:11] 2025-07-27 10:27:40,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:28:11] 2025-07-27 10:27:40,362 | INFO     | collected zombie processes
[2025-07-27 12:28:11] 2025-07-27 10:27:40,362 | INFO     | will attempt to kill all subprocesses of pid=414973
[2025-07-27 12:28:11] 2025-07-27 10:27:40,403 | INFO     | process IDs to be killed: [414973] (in reverse order)
[2025-07-27 12:28:11] 2025-07-27 10:27:40,426 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:28:11] 2025-07-27 10:27:40,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:28:11] 2025-07-27 10:27:40,428 | INFO     | did not find any defunct processes belonging to 414973
[2025-07-27 12:28:11] 2025-07-27 10:27:40,429 | INFO     | did not find any defunct processes belonging to 414973
[2025-07-27 12:28:11] 2025-07-27 10:27:40,429 | INFO     | ready for new job
[2025-07-27 12:28:11] 2025-07-27 10:27:40,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:28:11] 2025-07-27 10:27:40,430 | INFO     | ***************************************
[2025-07-27 12:28:11] 2025-07-27 10:27:40,430 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:28:11] 2025-07-27 10:27:40,430 | INFO     | ***************************************
[2025-07-27 12:28:11] 2025-07-27 10:27:40,430 | INFO     | 
[2025-07-27 12:28:11] 2025-07-27 10:27:40,430 | INFO     | architecture information:
[2025-07-27 12:28:11] 2025-07-27 10:27:40,430 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:28:11] 2025-07-27 10:27:40,439 | INFO     | cat /etc/os-release:
[2025-07-27 12:28:11] NAME="CentOS Linux"
[2025-07-27 12:28:11] VERSION="7 (Core)"
[2025-07-27 12:28:11] ID="centos"
[2025-07-27 12:28:11] ID_LIKE="rhel fedora"
[2025-07-27 12:28:11] VERSION_ID="7"
[2025-07-27 12:28:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:28:11] ANSI_COLOR="0;31"
[2025-07-27 12:28:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:28:11] HOME_URL="https://www.centos.org/"
[2025-07-27 12:28:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:28:11] 
[2025-07-27 12:28:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:28:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:28:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:28:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:28:11] 
[2025-07-27 12:28:11] 2025-07-27 10:27:40,439 | INFO     | ***************************************
[2025-07-27 12:28:11] 2025-07-27 10:27:40,943 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 12:28:11] 2025-07-27 10:27:40,955 | INFO     | sufficient remaining disk space (364961071104 B)
[2025-07-27 12:28:11] 2025-07-27 10:27:40,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:28:11] 2025-07-27 10:27:40,956 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:28:11] 2025-07-27 10:27:40,956 | INFO     | update_server=False
[2025-07-27 12:28:11] 2025-07-27 10:27:40,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:28:11] 2025-07-27 10:27:40,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:28:11] 2025-07-27 10:27:40,956 | INFO     | aborting loop
[2025-07-27 12:28:11] 2025-07-27 10:27:40,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:28:11] 2025-07-27 10:27:41,372 | INFO     | all data control threads have been joined
[2025-07-27 12:28:11] 2025-07-27 10:27:41,376 | INFO     | all job control threads have been joined
[2025-07-27 12:28:11] 2025-07-27 10:27:41,411 | INFO     | all payload control threads have been joined
[2025-07-27 12:28:11] 2025-07-27 10:27:41,962 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:41,962 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:41,962 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:41,998 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:42,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:28:11] 2025-07-27 10:27:42,378 | INFO     | [data] control thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:42,378 | INFO     | [job] control thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:42,417 | INFO     | [payload] control thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:42,490 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:42,750 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:42,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:28:11] 2025-07-27 10:27:42,883 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:42,909 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:43,381 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:43,392 | INFO     | [job] validate thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:43,424 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:44,019 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:46,863 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:28:11] 2025-07-27 10:27:47,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139959361783616)>', '<ExcThread(monitor, started 139958740309760)>']
[2025-07-27 12:28:11] 2025-07-27 10:27:52,696 | INFO     | all workflow threads have been joined
[2025-07-27 12:28:11] 2025-07-27 10:27:52,696 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:28:11] 2025-07-27 10:27:52,697 | INFO     | traces error code: 0
[2025-07-27 12:28:11] 2025-07-27 10:27:52,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:28:11] 2025-07-27 10:28:11,040 | INFO     | PID=408478 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 12:28:11] 2025-07-27 10:28:11,041 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:28:11] 2025-07-27 10:28:11,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:28:11] 2025-07-27 10:28:11,041 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:28:11] 2025-07-27 10:28:11,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:28:11] 2025-07-27 10:28:11,041 | INFO     | [monitor] control thread has ended
[2025-07-27 12:28:11] 2025-07-27 10:28:11,086 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:28:11] 2025-07-27 10:28:11,089 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:28:11] 2025-07-27 10:28:11,091 [wrapper] pilotpid: 408478
[2025-07-27 12:28:11] 2025-07-27 10:28:11,093 [wrapper] Pilot exit status: 0
[2025-07-27 12:28:11] 2025-07-27 10:28:11,101 [wrapper] pandaids: 6745229141
[2025-07-27 12:28:11] 2025-07-27 10:28:11,118 [wrapper] cleanup supervisor_pilot  427279 408479
[2025-07-27 12:28:11] 2025-07-27 10:28:11,121 [wrapper] Test setup, not cleaning
[2025-07-27 12:28:11] 2025-07-27 10:28:11,123 [wrapper] apfmon messages muted
[2025-07-27 12:28:11] 2025-07-27 10:28:11,125 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:28:11] 2025-07-27 10:28:11,128 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:28:11]  *** Error codes and diagnostics ***
[2025-07-27 12:28:11]     "exeErrorCode": 0,
[2025-07-27 12:28:11]     "exeErrorDiag": "",
[2025-07-27 12:28:11]     "pilotErrorCode": 0,
[2025-07-27 12:28:11]     "pilotErrorDiag": "",
[2025-07-27 12:28:11]  *** Listing of results directory ***
[2025-07-27 12:28:11] total 350476
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc    530466 Jul 26 16:04 pilot3.tar.gz
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc      5112 Jul 26 16:19 queuedata.json
[2025-07-27 12:28:11] -rwx------ 1 boinc boinc     36292 Jul 26 16:20 runpilot2-wrapper.sh
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc       100 Jul 27 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:28:11] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 10:56 run_atlas
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc       105 Jul 27 10:56 job.xml
[2025-07-27 12:28:11] -rw-r--r-- 2 boinc boinc 146435382 Jul 27 10:56 EVNT.45743347._002239.pool.root.1
[2025-07-27 12:28:11] -rw-r--r-- 2 boinc boinc    542894 Jul 27 10:56 input.tar.gz
[2025-07-27 12:28:11] -rw-r--r-- 2 boinc boinc     15095 Jul 27 10:56 start_atlas.sh
[2025-07-27 12:28:11] drwxrwx--x 2 boinc boinc      4096 Jul 27 10:56 shared
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc         0 Jul 27 10:56 boinc_setup_complete
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc      6526 Jul 27 10:56 init_data.xml
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc         0 Jul 27 10:56 boinc_lockfile
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc      2563 Jul 27 10:56 pandaJob.out
[2025-07-27 12:28:11] -rw------- 1 boinc boinc    980109 Jul 27 10:56 agis_schedconf.cvmfs.json
[2025-07-27 12:28:11] -rw------- 1 boinc boinc   1593052 Jul 27 10:56 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:28:11] drwx------ 4 boinc boinc      4096 Jul 27 10:56 pilot3
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc       529 Jul 27 12:27 boinc_task_state.xml
[2025-07-27 12:28:11] -rw------- 1 boinc boinc 207055915 Jul 27 12:27 HITS.45743349._039212.pool.root.1
[2025-07-27 12:28:11] -rw------- 1 boinc boinc      1020 Jul 27 12:27 memory_monitor_summary.json
[2025-07-27 12:28:11] -rw------- 1 boinc boinc    230653 Jul 27 12:27 log.45743349._039212.job.log.tgz.1
[2025-07-27 12:28:11] -rw------- 1 boinc boinc      7769 Jul 27 12:27 heartbeat.json
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc      8192 Jul 27 12:27 boinc_mmap_file
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc        27 Jul 27 12:27 wrapper_checkpoint.txt
[2025-07-27 12:28:11] -rw------- 1 boinc boinc       746 Jul 27 12:28 pilotlog.txt
[2025-07-27 12:28:11] -rw------- 1 boinc boinc        95 Jul 27 12:28 pilot_heartbeat.json
[2025-07-27 12:28:11] -rw------- 1 boinc boinc    528832 Jul 27 12:28 log.45743349._039212.job.log.1
[2025-07-27 12:28:11] -rw------- 1 boinc boinc       357 Jul 27 12:28 output.list
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc       620 Jul 27 12:28 runtime_log
[2025-07-27 12:28:11] -rw------- 1 boinc boinc    778240 Jul 27 12:28 result.tar.gz
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc      8749 Jul 27 12:28 runtime_log.err
[2025-07-27 12:28:11] -rw------- 1 boinc boinc       661 Jul 27 12:28 basNDm0vuz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGLSLDmqwy7ym.diag
[2025-07-27 12:28:11] -rw-r--r-- 1 boinc boinc     21395 Jul 27 12:28 stderr.txt
[2025-07-27 12:28:11] HITS file was successfully produced:
[2025-07-27 12:28:11] -rw------- 1 boinc boinc 207055915 Jul 27 12:27 shared/HITS.pool.root.1
[2025-07-27 12:28:11]  *** Contents of shared directory: ***
[2025-07-27 12:28:11] total 346524
[2025-07-27 12:28:11] -rw-r--r-- 2 boinc boinc 146435382 Jul 27 10:56 ATLAS.root_0
[2025-07-27 12:28:11] -rw-r--r-- 2 boinc boinc    542894 Jul 27 10:56 input.tar.gz
[2025-07-27 12:28:11] -rw-r--r-- 2 boinc boinc     15095 Jul 27 10:56 start_atlas.sh
[2025-07-27 12:28:11] -rw------- 1 boinc boinc 207055915 Jul 27 12:27 HITS.pool.root.1
[2025-07-27 12:28:11] -rw------- 1 boinc boinc    778240 Jul 27 12:28 result.tar.gz
12:28:12 (404846): run_atlas exited; CPU time 15683.570682
12:28:12 (404846): called boinc_finish(0)

</stderr_txt>
]]>

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