Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:40:03 (4400): wrapper (7.7.26015): starting
15:40:03 (4400): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 15:40:03] Arguments: --nthreads 8
[2025-07-26 15:40:03] Threads: 8
[2025-07-26 15:40:03] Checking for CVMFS
[2025-07-26 15:40:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 15:40:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 15:40:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 15:40:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 15:40:03] 2.11.2.0 2934 136 56264 148787 0 57 13395562 20275200 1 130560 0 90937 99.996 3963 35383 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 15:40:03] CVMFS is ok
[2025-07-26 15:40:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 15:40:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 15:40:03] Further information can be found at the LHC@home message board.
[2025-07-26 15:40:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 15:40:03] Checking for apptainer binary...
[2025-07-26 15:40:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 15:40:03] Running /usr/bin/apptainer --version
[2025-07-26 15:40:03] apptainer version 1.3.2-1.el7
[2025-07-26 15:40:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 15:40:05] c-204-33.aglt2.org
[2025-07-26 15:40:05] apptainer works
[2025-07-26 15:40:05] Set ATHENA_PROC_NUMBER=8
[2025-07-26 15:40:05] Set ATHENA_CORE_NUMBER=8
[2025-07-26 15:40:05] Starting ATLAS job with PandaID=6745229137
[2025-07-26 15:40:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 17:56:39]  *** The last 200 lines of the pilot log: ***
[2025-07-26 17:56:39] 2025-07-26 21:56:03,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 17:56:39] 2025-07-26 21:56:04,869 | INFO     | PID=7988 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 17:56:39] 2025-07-26 21:56:05,586 | INFO     | monitor loop #603: job 0:6745229137 is in state 'finished'
[2025-07-26 17:56:39] 2025-07-26 21:56:05,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 17:56:39] 2025-07-26 21:56:06,801 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 17:56:39] 2025-07-26 21:56:06,805 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-07-26 17:56:39] 2025-07-26 21:56:06,807 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745229137/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 17:56:39] 2025-07-26 21:56:06,807 | INFO     | extracted standard info from prmon json
[2025-07-26 17:56:39] 2025-07-26 21:56:06,807 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 17:56:39] 2025-07-26 21:56:06,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 17:56:39] 2025-07-26 21:56:06,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 17:56:39] 2025-07-26 21:56:06,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 17:56:39] 2025-07-26 21:56:06,811 | INFO     | fitting pss+swap vs Time
[2025-07-26 17:56:39] 2025-07-26 21:56:06,811 | INFO     | sum of square deviations: 729472282.0
[2025-07-26 17:56:39] 2025-07-26 21:56:06,812 | INFO     | sum of deviations: -2555379548.0000005
[2025-07-26 17:56:39] 2025-07-26 21:56:06,812 | INFO     | mean x: 1753562879.0
[2025-07-26 17:56:39] 2025-07-26 21:56:06,812 | INFO     | mean y: 2558954.3909774437
[2025-07-26 17:56:39] 2025-07-26 21:56:06,812 | INFO     | -- intersect: 6145381413.447208
[2025-07-26 17:56:39] 2025-07-26 21:56:06,812 | INFO     | intersect: 6145381413.447208
[2025-07-26 17:56:39] 2025-07-26 21:56:06,813 | INFO     | chi2: 1.5384617931577758
[2025-07-26 17:56:39] 2025-07-26 21:56:06,813 | INFO     | sum of square deviations: 650252192.0
[2025-07-26 17:56:39] 2025-07-26 21:56:06,813 | INFO     | sum of deviations: -2187301888.0
[2025-07-26 17:56:39] 2025-07-26 21:56:06,814 | INFO     | mean x: 1753562726.5
[2025-07-26 17:56:39] 2025-07-26 21:56:06,814 | INFO     | mean y: 2559663.3125
[2025-07-26 17:56:39] 2025-07-26 21:56:06,814 | INFO     | -- intersect: 5901149640.53764
[2025-07-26 17:56:39] 2025-07-26 21:56:06,814 | INFO     | intersect: 5901149640.53764
[2025-07-26 17:56:39] 2025-07-26 21:56:06,814 | INFO     | chi2: 1.538844482994293
[2025-07-26 17:56:39] 2025-07-26 21:56:06,814 | INFO     | current chi2=1.538844482994293 (change=-0.024874835255535046 %)
[2025-07-26 17:56:39] 2025-07-26 21:56:06,814 | INFO     | right removable region: 127
[2025-07-26 17:56:39] 2025-07-26 21:56:06,815 | INFO     | sum of square deviations: 650252192.0
[2025-07-26 17:56:39] 2025-07-26 21:56:06,815 | INFO     | sum of deviations: -22181675555.5
[2025-07-26 17:56:39] 2025-07-26 21:56:06,815 | INFO     | mean x: 1753563031.5
[2025-07-26 17:56:39] 2025-07-26 21:56:06,816 | INFO     | mean y: 2596074.5234375
[2025-07-26 17:56:39] 2025-07-26 21:56:06,816 | INFO     | -- intersect: 59820873827.98317
[2025-07-26 17:56:39] 2025-07-26 21:56:06,816 | INFO     | intersect: 59820873827.98317
[2025-07-26 17:56:39] 2025-07-26 21:56:06,816 | INFO     | chi2: 0.11847040802489825
[2025-07-26 17:56:39] 2025-07-26 21:56:06,816 | INFO     | current chi2=0.11847040802489825 (change=92.29942475323152 %)
[2025-07-26 17:56:39] 2025-07-26 21:56:06,816 | INFO     | sum of square deviations: 576985702.0
[2025-07-26 17:56:39] 2025-07-26 21:56:06,817 | INFO     | sum of deviations: -19254570517.0
[2025-07-26 17:56:39] 2025-07-26 21:56:06,817 | INFO     | mean x: 1753563184.0
[2025-07-26 17:56:39] 2025-07-26 21:56:06,817 | INFO     | mean y: 2589957.5691056913
[2025-07-26 17:56:39] 2025-07-26 21:56:06,817 | INFO     | -- intersect: 58520688179.59931
[2025-07-26 17:56:39] 2025-07-26 21:56:06,817 | INFO     | intersect: 58520688179.59931
[2025-07-26 17:56:39] 2025-07-26 21:56:06,818 | INFO     | chi2: 0.11757161190057534
[2025-07-26 17:56:39] 2025-07-26 21:56:06,818 | INFO     | current chi2=0.11757161190057534 (change=0.758667197410185 %)
[2025-07-26 17:56:39] 2025-07-26 21:56:06,818 | INFO     | left removable region: 20
[2025-07-26 17:56:39] 2025-07-26 21:56:06,818 | INFO     | sum of square deviations: 379832238.0
[2025-07-26 17:56:39] 2025-07-26 21:56:06,819 | INFO     | sum of deviations: -10846644179.0
[2025-07-26 17:56:39] 2025-07-26 21:56:06,819 | INFO     | mean x: 1753563306.0
[2025-07-26 17:56:39] 2025-07-26 21:56:06,819 | INFO     | mean y: 2573317.8411214952
[2025-07-26 17:56:39] 2025-07-26 21:56:06,819 | INFO     | -- intersect: 50078041702.73607
[2025-07-26 17:56:39] 2025-07-26 21:56:06,819 | INFO     | intersect: 50078041702.73607
[2025-07-26 17:56:39] 2025-07-26 21:56:06,819 | INFO     | chi2: 0.09806559585843673
[2025-07-26 17:56:39] 2025-07-26 21:56:06,820 | INFO     | -- intersect: 50078041702.73607
[2025-07-26 17:56:39] 2025-07-26 21:56:06,820 | INFO     | current memory leak: -28.56 B/s (using 107 data points, chi2=0.10)
[2025-07-26 17:56:39] 2025-07-26 21:56:06,820 | INFO     | could have reported an average CPU frequency of 1985 MHz (8 samples)
[2025-07-26 17:56:39] 2025-07-26 21:56:06,820 | INFO     | ..............................
[2025-07-26 17:56:39] 2025-07-26 21:56:06,820 | INFO     | . Timing measurements:
[2025-07-26 17:56:39] 2025-07-26 21:56:06,821 | INFO     | . get job = 0 s
[2025-07-26 17:56:39] 2025-07-26 21:56:06,821 | INFO     | . initial setup = 2 s
[2025-07-26 17:56:39] 2025-07-26 21:56:06,821 | INFO     | . payload setup = 10 s
[2025-07-26 17:56:39] 2025-07-26 21:56:06,821 | INFO     | . stage-in = 0 s
[2025-07-26 17:56:39] 2025-07-26 21:56:06,821 | INFO     | . payload execution = 8104 s
[2025-07-26 17:56:39] 2025-07-26 21:56:06,821 | INFO     | . stage-out = 0 s
[2025-07-26 17:56:39] 2025-07-26 21:56:06,821 | INFO     | . log creation = 0 s
[2025-07-26 17:56:39] 2025-07-26 21:56:06,821 | INFO     | ..............................
[2025-07-26 17:56:39] 2025-07-26 21:56:07,305 | INFO     | 
[2025-07-26 17:56:39] 2025-07-26 21:56:07,306 | INFO     | job summary report
[2025-07-26 17:56:39] 2025-07-26 21:56:07,312 | INFO     | --------------------------------------------------
[2025-07-26 17:56:39] 2025-07-26 21:56:07,312 | INFO     | PanDA job id: 6745229137
[2025-07-26 17:56:39] 2025-07-26 21:56:07,312 | INFO     | task id: 45743349
[2025-07-26 17:56:39] 2025-07-26 21:56:07,312 | INFO     | errors: (none)
[2025-07-26 17:56:39] 2025-07-26 21:56:07,312 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 17:56:39] 2025-07-26 21:56:07,313 | INFO     | pilot state: finished 
[2025-07-26 17:56:39] 2025-07-26 21:56:07,313 | INFO     | transexitcode: 0
[2025-07-26 17:56:39] 2025-07-26 21:56:07,313 | INFO     | exeerrorcode: 0
[2025-07-26 17:56:39] 2025-07-26 21:56:07,313 | INFO     | exeerrordiag: 
[2025-07-26 17:56:39] 2025-07-26 21:56:07,313 | INFO     | exitcode: 0
[2025-07-26 17:56:39] 2025-07-26 21:56:07,313 | INFO     | exitmsg: OK
[2025-07-26 17:56:39] 2025-07-26 21:56:07,314 | INFO     | cpuconsumptiontime: 60638 s
[2025-07-26 17:56:39] 2025-07-26 21:56:07,314 | INFO     | nevents: 400
[2025-07-26 17:56:39] 2025-07-26 21:56:07,314 | INFO     | neventsw: 0
[2025-07-26 17:56:39] 2025-07-26 21:56:07,314 | INFO     | pid: 14490
[2025-07-26 17:56:39] 2025-07-26 21:56:07,314 | INFO     | pgrp: 14490
[2025-07-26 17:56:39] 2025-07-26 21:56:07,315 | INFO     | corecount: 8
[2025-07-26 17:56:39] 2025-07-26 21:56:07,315 | INFO     | event service: False
[2025-07-26 17:56:39] 2025-07-26 21:56:07,315 | INFO     | sizes: {0: 2396647, 1: 2397503, 6: 2397765, 12: 2397793, 8118: 2425565, 8119: 2425564, 8121: 2434746, 8122: 2434802, 8130: 2434996}
[2025-07-26 17:56:39] 2025-07-26 21:56:07,315 | INFO     | --------------------------------------------------
[2025-07-26 17:56:39] 2025-07-26 21:56:07,315 | INFO     | 
[2025-07-26 17:56:39] 2025-07-26 21:56:07,315 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 17:56:39] 2025-07-26 21:56:07,343 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,343 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,343 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,344 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,346 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 17:56:39] 2025-07-26 21:56:07,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,346 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 17:56:39] 2025-07-26 21:56:07,347 | INFO     | job 6745229137 has completed (purged errors)
[2025-07-26 17:56:39] 2025-07-26 21:56:07,347 | INFO     | overall cleanup function is called
[2025-07-26 17:56:39] 2025-07-26 21:56:08,353 | INFO     | --- collectZombieJob: --- 10, [14490]
[2025-07-26 17:56:39] 2025-07-26 21:56:08,353 | INFO     | zombie collector waiting for pid 14490
[2025-07-26 17:56:39] 2025-07-26 21:56:08,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 17:56:39] 2025-07-26 21:56:08,354 | INFO     | collected zombie processes
[2025-07-26 17:56:39] 2025-07-26 21:56:08,354 | INFO     | will attempt to kill all subprocesses of pid=14490
[2025-07-26 17:56:39] 2025-07-26 21:56:08,442 | INFO     | process IDs to be killed: [14490] (in reverse order)
[2025-07-26 17:56:39] 2025-07-26 21:56:08,500 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 17:56:39] 2025-07-26 21:56:08,501 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 17:56:39] 2025-07-26 21:56:08,505 | INFO     | did not find any defunct processes belonging to 14490
[2025-07-26 17:56:39] 2025-07-26 21:56:08,508 | INFO     | did not find any defunct processes belonging to 14490
[2025-07-26 17:56:39] 2025-07-26 21:56:08,509 | INFO     | ready for new job
[2025-07-26 17:56:39] 2025-07-26 21:56:08,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 17:56:39] 2025-07-26 21:56:08,511 | INFO     | ***************************************
[2025-07-26 17:56:39] 2025-07-26 21:56:08,511 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 17:56:39] 2025-07-26 21:56:08,511 | INFO     | ***************************************
[2025-07-26 17:56:39] 2025-07-26 21:56:08,511 | INFO     | 
[2025-07-26 17:56:39] 2025-07-26 21:56:08,512 | INFO     | architecture information:
[2025-07-26 17:56:39] 2025-07-26 21:56:08,513 | INFO     | executing command: cat /etc/os-release
[2025-07-26 17:56:39] 2025-07-26 21:56:08,532 | INFO     | cat /etc/os-release:
[2025-07-26 17:56:39] NAME="CentOS Linux"
[2025-07-26 17:56:39] VERSION="7 (Core)"
[2025-07-26 17:56:39] ID="centos"
[2025-07-26 17:56:39] ID_LIKE="rhel fedora"
[2025-07-26 17:56:39] VERSION_ID="7"
[2025-07-26 17:56:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 17:56:39] ANSI_COLOR="0;31"
[2025-07-26 17:56:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 17:56:39] HOME_URL="https://www.centos.org/"
[2025-07-26 17:56:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 17:56:39] 
[2025-07-26 17:56:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 17:56:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 17:56:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 17:56:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 17:56:39] 
[2025-07-26 17:56:39] 2025-07-26 21:56:08,532 | INFO     | ***************************************
[2025-07-26 17:56:39] 2025-07-26 21:56:09,035 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 17:56:39] 2025-07-26 21:56:09,055 | INFO     | sufficient remaining disk space (18738053120 B)
[2025-07-26 17:56:39] 2025-07-26 21:56:09,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 17:56:39] 2025-07-26 21:56:09,056 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 17:56:39] 2025-07-26 21:56:09,057 | INFO     | update_server=False
[2025-07-26 17:56:39] 2025-07-26 21:56:09,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 17:56:39] 2025-07-26 21:56:09,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 17:56:39] 2025-07-26 21:56:09,096 | INFO     | aborting loop
[2025-07-26 17:56:39] 2025-07-26 21:56:09,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 17:56:39] 2025-07-26 21:56:09,855 | INFO     | all job control threads have been joined
[2025-07-26 17:56:39] 2025-07-26 21:56:09,932 | INFO     | all payload control threads have been joined
[2025-07-26 17:56:39] 2025-07-26 21:56:10,063 | INFO     | [job] retrieve thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:10,101 | INFO     | [job] job monitor thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:10,118 | INFO     | all data control threads have been joined
[2025-07-26 17:56:39] 2025-07-26 21:56:10,136 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:10,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 17:56:39] 2025-07-26 21:56:10,859 | INFO     | [job] control thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:10,937 | INFO     | [payload] control thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:10,958 | INFO     | [payload] validate_post thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:11,047 | INFO     | [job] validate thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:11,049 | INFO     | [data] copytool_in thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:11,124 | INFO     | [data] control thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:11,422 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:11,441 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:11,609 | INFO     | [payload] failed_post thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:11,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 17:56:39] 2025-07-26 21:56:12,560 | INFO     | [data] copytool_out thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:12,930 | INFO     | [job] queue monitor thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:13,798 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:19,864 | INFO     | job.realtimelogging is not enabled
[2025-07-26 17:56:39] 2025-07-26 21:56:20,870 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 17:56:39] 2025-07-26 21:56:21,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473331078976)>', '<ExcThread(monitor, started 140472542557952)>']
[2025-07-26 17:56:39] 2025-07-26 21:56:26,101 | INFO     | all workflow threads have been joined
[2025-07-26 17:56:39] 2025-07-26 21:56:26,101 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 17:56:39] 2025-07-26 21:56:26,102 | INFO     | traces error code: 0
[2025-07-26 17:56:39] 2025-07-26 21:56:26,103 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 17:56:39] 2025-07-26 21:56:39,084 | INFO     | PID=7988 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 17:56:39] 2025-07-26 21:56:39,085 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 17:56:39] 2025-07-26 21:56:39,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 17:56:39] 2025-07-26 21:56:39,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 17:56:39] 2025-07-26 21:56:39,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 17:56:39] 2025-07-26 21:56:39,086 | INFO     | [monitor] control thread has ended
[2025-07-26 17:56:39] 2025-07-26 21:56:39,223 [wrapper] ==== pilot stdout END ====
[2025-07-26 17:56:39] 2025-07-26 21:56:39,227 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 17:56:39] 2025-07-26 21:56:39,231 [wrapper] pilotpid: 7988
[2025-07-26 17:56:39] 2025-07-26 21:56:39,234 [wrapper] Pilot exit status: 0
[2025-07-26 17:56:39] 2025-07-26 21:56:39,248 [wrapper] pandaids: 6745229137
[2025-07-26 17:56:39] 2025-07-26 21:56:39,283 [wrapper] cleanup supervisor_pilot 12831 7989
[2025-07-26 17:56:39] 2025-07-26 21:56:39,288 [wrapper] Test setup, not cleaning
[2025-07-26 17:56:39] 2025-07-26 21:56:39,293 [wrapper] apfmon messages muted
[2025-07-26 17:56:39] 2025-07-26 21:56:39,297 [wrapper] ==== wrapper stdout END ====
[2025-07-26 17:56:39] 2025-07-26 21:56:39,302 [wrapper] ==== wrapper stderr END ====
[2025-07-26 17:56:39]  *** Error codes and diagnostics ***
[2025-07-26 17:56:39]     "exeErrorCode": 0,
[2025-07-26 17:56:39]     "exeErrorDiag": "",
[2025-07-26 17:56:39]     "pilotErrorCode": 0,
[2025-07-26 17:56:39]     "pilotErrorDiag": "",
[2025-07-26 17:56:39]  *** Listing of results directory ***
[2025-07-26 17:56:39] total 354336
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 10:04 pilot3.tar.gz
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 10:19 queuedata.json
[2025-07-26 17:56:39] -rwx------ 1 boincer umatlas     36292 Jul 26 10:20 runpilot2-wrapper.sh
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas       100 Jul 26 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 17:56:39] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 15:40 run_atlas
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas       105 Jul 26 15:40 job.xml
[2025-07-26 17:56:39] -rw-r--r-- 2 boincer umatlas 146435382 Jul 26 15:40 EVNT.45743347._002239.pool.root.1
[2025-07-26 17:56:39] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 15:40 start_atlas.sh
[2025-07-26 17:56:39] drwxrwx--x 2 boincer umatlas      4096 Jul 26 15:40 shared
[2025-07-26 17:56:39] -rw-r--r-- 2 boincer umatlas    542891 Jul 26 15:40 input.tar.gz
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas         0 Jul 26 15:40 boinc_lockfile
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 15:40 pandaJob.out
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas    980125 Jul 26 15:40 agis_schedconf.cvmfs.json
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas   1593052 Jul 26 15:40 agis_ddmendpoints.agis.ALL.json
[2025-07-26 17:56:39] drwx------ 4 boincer umatlas      4096 Jul 26 15:40 pilot3
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas      5824 Jul 26 17:55 init_data.xml
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas 210398210 Jul 26 17:55 HITS.45743349._039208.pool.root.1
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas       530 Jul 26 17:55 boinc_task_state.xml
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas      1049 Jul 26 17:55 memory_monitor_summary.json
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas    327376 Jul 26 17:55 log.45743349._039208.job.log.tgz.1
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas      7845 Jul 26 17:56 heartbeat.json
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 17:56 boinc_mmap_file
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas        27 Jul 26 17:56 wrapper_checkpoint.txt
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas        95 Jul 26 17:56 pilot_heartbeat.json
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas       744 Jul 26 17:56 pilotlog.txt
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas    743385 Jul 26 17:56 log.45743349._039208.job.log.1
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas       357 Jul 26 17:56 output.list
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas       620 Jul 26 17:56 runtime_log
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas   1085440 Jul 26 17:56 result.tar.gz
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas      8660 Jul 26 17:56 runtime_log.err
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas       660 Jul 26 17:56 41TNDm0vuz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCLSLDm1f3hHn.diag
[2025-07-26 17:56:39] -rw-r--r-- 1 boincer umatlas     21211 Jul 26 17:56 stderr.txt
[2025-07-26 17:56:39] HITS file was successfully produced:
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas 210398210 Jul 26 17:55 shared/HITS.pool.root.1
[2025-07-26 17:56:39]  *** Contents of shared directory: ***
[2025-07-26 17:56:39] total 350084
[2025-07-26 17:56:39] -rw-r--r-- 2 boincer umatlas 146435382 Jul 26 15:40 ATLAS.root_0
[2025-07-26 17:56:39] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 15:40 start_atlas.sh
[2025-07-26 17:56:39] -rw-r--r-- 2 boincer umatlas    542891 Jul 26 15:40 input.tar.gz
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas 210398210 Jul 26 17:55 HITS.pool.root.1
[2025-07-26 17:56:39] -rw------- 1 boincer umatlas   1085440 Jul 26 17:56 result.tar.gz
17:56:41 (4400): run_atlas exited; CPU time 60641.809410
17:56:41 (4400): called boinc_finish(0)

</stderr_txt>
]]>

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