Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:49:23 (3632789): wrapper (7.7.26015): starting
07:49:23 (3632789): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 07:49:23] Arguments: --nthreads 3
[2025-07-27 07:49:23] Threads: 3
[2025-07-27 07:49:23] Checking for CVMFS
[2025-07-27 07:49:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 07:49:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 07:49:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 07:49:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 07:49:23] 2.9.2.0 1693042 7577 84404 148801 0 57 11591601 36864001 0 130560 0 5119382 99.989 280029 1817 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 07:49:23] CVMFS is ok
[2025-07-27 07:49:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 07:49:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 07:49:23] Further information can be found at the LHC@home message board.
[2025-07-27 07:49:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 07:49:23] Checking for apptainer binary...
[2025-07-27 07:49:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 07:49:23] Running /usr/bin/apptainer --version
[2025-07-27 07:49:23] apptainer version 1.4.1-1.1
[2025-07-27 07:49:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 07:49:24] magicA250a
[2025-07-27 07:49:24] apptainer works
[2025-07-27 07:49:24] Set ATHENA_PROC_NUMBER=3
[2025-07-27 07:49:24] Set ATHENA_CORE_NUMBER=3
[2025-07-27 07:49:24] Starting ATLAS job with PandaID=6745229179
[2025-07-27 07:49:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 09:26:01]  *** The last 200 lines of the pilot log: ***
[2025-07-27 09:26:01]  replicas=None
[2025-07-27 09:26:01]  scope=mc23_13p6TeV
[2025-07-27 09:26:01]  status=None
[2025-07-27 09:26:01]  status_code=0
[2025-07-27 09:26:01]  storage_token=
[2025-07-27 09:26:01]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745229179/log.45743349._039250.job.log.tgz.1
[2025-07-27 09:26:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/07/log.45743349._039250.job.log.tgz.1
[2025-07-27 09:26:01]  workdir=None
[2025-07-27 09:26:01] ]
[2025-07-27 09:26:01] 2025-07-27 07:25:23,860 | INFO     | transferring file log.45743349._039250.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745229179/log.45743349._039250.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 09:26:01] 2025-07-27 07:25:23,860 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745229179/log.45743349._039250.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0392
[2025-07-27 09:26:01] 2025-07-27 07:25:23,872 | INFO     | adding to output.list: log.45743349._039250.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/07/log.45743349._039250.job.log.tg
[2025-07-27 09:26:01] 2025-07-27 07:25:23,872 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 09:26:01] 2025-07-27 07:25:23,873 | INFO     | summary of transferred files:
[2025-07-27 09:26:01] 2025-07-27 07:25:23,873 | INFO     |  -- lfn=log.45743349._039250.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 09:26:01] 2025-07-27 07:25:23,873 | INFO     | stage-out finished correctly
[2025-07-27 09:26:01] 2025-07-27 07:25:25,693 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 09:26:01] 2025-07-27 07:25:26,684 | INFO     | job 6745229179 has state=finished
[2025-07-27 09:26:01] 2025-07-27 07:25:26,684 | INFO     | preparing for final server update for job 6745229179 in state='finished'
[2025-07-27 09:26:01] 2025-07-27 07:25:26,684 | INFO     | this job has now completed (state=finished)
[2025-07-27 09:26:01] 2025-07-27 07:25:26,684 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 09:26:01] 2025-07-27 07:25:26,684 | INFO     | log transfer has been attempted: DONE
[2025-07-27 09:26:01] 2025-07-27 07:25:26,685 | INFO     | job 6745229179 has finished - writing final server update
[2025-07-27 09:26:01] 2025-07-27 07:25:26,685 | INFO     | total number of processed events: 400 (read)
[2025-07-27 09:26:01] 2025-07-27 07:25:26,685 | INFO     | executing command: lscpu
[2025-07-27 09:26:01] 2025-07-27 07:25:26,699 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 09:26:01] 2025-07-27 07:25:28,825 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 09:26:01] 2025-07-27 07:25:28,826 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3795.25725
[2025-07-27 09:26:01] 2025-07-27 07:25:28,827 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745229179/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:26:01] 2025-07-27 07:25:28,828 | INFO     | extracted standard info from prmon json
[2025-07-27 09:26:01] 2025-07-27 07:25:28,828 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 09:26:01] 2025-07-27 07:25:28,828 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 09:26:01] 2025-07-27 07:25:28,828 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 09:26:01] 2025-07-27 07:25:28,828 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | fitting pss+swap vs Time
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | sum of square deviations: 204163828.0
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | sum of deviations: -4923032206.000002
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | mean x: 1753598316.0
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | mean y: 2398038.2988505745
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | -- intersect: 42287170373.46181
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | intersect: 42287170373.46181
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | chi2: 0.08091182239994986
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | -- intersect: 42287170373.46181
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | current memory leak: -24.11 B/s (using 87 data points, chi2=0.08)
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | could have reported an average CPU frequency of 3895 MHz (7 samples)
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | ..............................
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | . Timing measurements:
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | . get job = 0 s
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | . initial setup = 1 s
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | . payload setup = 3 s
[2025-07-27 09:26:01] 2025-07-27 07:25:28,829 | INFO     | . stage-in = 0 s
[2025-07-27 09:26:01] 2025-07-27 07:25:28,830 | INFO     | . payload execution = 5734 s
[2025-07-27 09:26:01] 2025-07-27 07:25:28,830 | INFO     | . stage-out = 0 s
[2025-07-27 09:26:01] 2025-07-27 07:25:28,830 | INFO     | . log creation = 0 s
[2025-07-27 09:26:01] 2025-07-27 07:25:28,830 | INFO     | ..............................
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | 
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | job summary report
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | --------------------------------------------------
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | PanDA job id: 6745229179
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | task id: 45743349
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | errors: (none)
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | pilot state: finished 
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | transexitcode: 0
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | exeerrorcode: 0
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | exeerrordiag: 
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | exitcode: 0
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | exitmsg: OK
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | cpuconsumptiontime: 16633 s
[2025-07-27 09:26:01] 2025-07-27 07:25:28,860 | INFO     | nevents: 400
[2025-07-27 09:26:01] 2025-07-27 07:25:28,861 | INFO     | neventsw: 0
[2025-07-27 09:26:01] 2025-07-27 07:25:28,861 | INFO     | pid: 3642915
[2025-07-27 09:26:01] 2025-07-27 07:25:28,861 | INFO     | pgrp: 3642915
[2025-07-27 09:26:01] 2025-07-27 07:25:28,861 | INFO     | corecount: 3
[2025-07-27 09:26:01] 2025-07-27 07:25:28,861 | INFO     | event service: False
[2025-07-27 09:26:01] 2025-07-27 07:25:28,861 | INFO     | sizes: {0: 2397472, 2: 2397734, 11: 2397762, 5741: 2424604, 5742: 2433608, 5744: 2433664, 5747: 2433986}
[2025-07-27 09:26:01] 2025-07-27 07:25:28,861 | INFO     | --------------------------------------------------
[2025-07-27 09:26:01] 2025-07-27 07:25:28,861 | INFO     | 
[2025-07-27 09:26:01] 2025-07-27 07:25:28,861 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 09:26:01] 2025-07-27 07:25:28,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,872 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,872 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,872 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,872 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,872 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,872 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | job 6745229179 has completed (purged errors)
[2025-07-27 09:26:01] 2025-07-27 07:25:28,873 | INFO     | overall cleanup function is called
[2025-07-27 09:26:01] 2025-07-27 07:25:29,726 | WARNING  | process 3642915 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 09:26:01] 2025-07-27 07:25:29,754 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:26:01] 2025-07-27 07:25:29,755 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:26:01] 2025-07-27 07:25:29,755 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6745229179/payload.stdout) since it has not been created yet
[2025-07-27 09:26:01] 2025-07-27 07:25:29,755 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 09:26:01] 2025-07-27 07:25:29,764 | INFO     | sufficient remaining disk space (348874866688 B)
[2025-07-27 09:26:01] 2025-07-27 07:25:29,764 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-07-27 09:26:01] 2025-07-27 07:25:29,765 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6745229179/HITS.45743349._039250.pool.root.1 since it does not exist
[2025-07-27 09:26:01] 2025-07-27 07:25:29,802 | INFO     | number of running child processes to parent process 3642915: 1
[2025-07-27 09:26:01] 2025-07-27 07:25:29,802 | INFO     | maximum number of monitored processes: 6
[2025-07-27 09:26:01] 2025-07-27 07:25:29,802 | INFO     | aborting job monitoring since job object (job id=6745229179) has expired
[2025-07-27 09:26:01] 2025-07-27 07:25:29,879 | INFO     | --- collectZombieJob: --- 10, [3642915]
[2025-07-27 09:26:01] 2025-07-27 07:25:29,879 | INFO     | zombie collector waiting for pid 3642915
[2025-07-27 09:26:01] 2025-07-27 07:25:29,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 09:26:01] 2025-07-27 07:25:29,879 | INFO     | collected zombie processes
[2025-07-27 09:26:01] 2025-07-27 07:25:29,879 | INFO     | will attempt to kill all subprocesses of pid=3642915
[2025-07-27 09:26:01] 2025-07-27 07:25:29,918 | INFO     | process IDs to be killed: [3642915] (in reverse order)
[2025-07-27 09:26:01] 2025-07-27 07:25:29,941 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 09:26:01] 2025-07-27 07:25:29,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 09:26:01] 2025-07-27 07:25:29,942 | INFO     | did not find any defunct processes belonging to 3642915
[2025-07-27 09:26:01] 2025-07-27 07:25:29,943 | INFO     | did not find any defunct processes belonging to 3642915
[2025-07-27 09:26:01] 2025-07-27 07:25:29,943 | INFO     | ready for new job
[2025-07-27 09:26:01] 2025-07-27 07:25:29,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 09:26:01] 2025-07-27 07:25:29,944 | INFO     | ***************************************
[2025-07-27 09:26:01] 2025-07-27 07:25:29,944 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 09:26:01] 2025-07-27 07:25:29,944 | INFO     | ***************************************
[2025-07-27 09:26:01] 2025-07-27 07:25:29,944 | INFO     | 
[2025-07-27 09:26:01] 2025-07-27 07:25:29,944 | INFO     | architecture information:
[2025-07-27 09:26:01] 2025-07-27 07:25:29,945 | INFO     | executing command: cat /etc/os-release
[2025-07-27 09:26:01] 2025-07-27 07:25:29,953 | INFO     | cat /etc/os-release:
[2025-07-27 09:26:01] NAME="CentOS Linux"
[2025-07-27 09:26:01] VERSION="7 (Core)"
[2025-07-27 09:26:01] ID="centos"
[2025-07-27 09:26:01] ID_LIKE="rhel fedora"
[2025-07-27 09:26:01] VERSION_ID="7"
[2025-07-27 09:26:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 09:26:01] ANSI_COLOR="0;31"
[2025-07-27 09:26:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 09:26:01] HOME_URL="https://www.centos.org/"
[2025-07-27 09:26:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 09:26:01] 
[2025-07-27 09:26:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 09:26:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 09:26:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 09:26:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 09:26:01] 
[2025-07-27 09:26:01] 2025-07-27 07:25:29,953 | INFO     | ***************************************
[2025-07-27 09:26:01] 2025-07-27 07:25:30,456 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 09:26:01] 2025-07-27 07:25:30,467 | INFO     | sufficient remaining disk space (348874866688 B)
[2025-07-27 09:26:01] 2025-07-27 07:25:30,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 09:26:01] 2025-07-27 07:25:30,468 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 09:26:01] 2025-07-27 07:25:30,468 | INFO     | update_server=False
[2025-07-27 09:26:01] 2025-07-27 07:25:30,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 09:26:01] 2025-07-27 07:25:30,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:26:01] 2025-07-27 07:25:30,468 | INFO     | will abort loop
[2025-07-27 09:26:01] 2025-07-27 07:25:30,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:26:01] 2025-07-27 07:25:30,470 | INFO     | all payload control threads have been joined
[2025-07-27 09:26:01] 2025-07-27 07:25:31,047 | INFO     | all data control threads have been joined
[2025-07-27 09:26:01] 2025-07-27 07:25:31,473 | INFO     | [job] retrieve thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:31,474 | INFO     | [job] job monitor thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:31,474 | INFO     | [job] queue monitor thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:31,474 | INFO     | [payload] control thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:31,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 09:26:01] 2025-07-27 07:25:31,785 | INFO     | [data] copytool_in thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:31,791 | INFO     | [payload] validate_post thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:31,805 | INFO     | all job control threads have been joined
[2025-07-27 09:26:01] 2025-07-27 07:25:31,916 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 09:26:01] 2025-07-27 07:25:32,052 | INFO     | [data] control thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:32,489 | INFO     | [job] validate thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:32,522 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:32,554 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:32,584 | INFO     | [payload] failed_post thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:32,764 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:32,811 | INFO     | [job] control thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:33,922 | INFO     | [data] copytool_out thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:35,736 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:41,050 | INFO     | job.realtimelogging is not enabled
[2025-07-27 09:26:01] 2025-07-27 07:25:42,056 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 09:26:01] 2025-07-27 07:25:42,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139868694828864)>', '<ExcThread(monitor, started 139868210452224)>']
[2025-07-27 09:26:01] 2025-07-27 07:25:47,935 | INFO     | all workflow threads have been joined
[2025-07-27 09:26:01] 2025-07-27 07:25:47,935 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 09:26:01] 2025-07-27 07:25:47,935 | INFO     | traces error code: 0
[2025-07-27 09:26:01] 2025-07-27 07:25:47,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 09:26:01] 2025-07-27 07:26:01,046 | INFO     | PID=3636428 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 09:26:01] 2025-07-27 07:26:01,046 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 09:26:01] 2025-07-27 07:26:01,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 09:26:01] 2025-07-27 07:26:01,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 09:26:01] 2025-07-27 07:26:01,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 09:26:01] 2025-07-27 07:26:01,046 | INFO     | [monitor] control thread has ended
[2025-07-27 09:26:01] 2025-07-27 07:26:01,091 [wrapper] ==== pilot stdout END ====
[2025-07-27 09:26:01] 2025-07-27 07:26:01,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 09:26:01] 2025-07-27 07:26:01,095 [wrapper] pilotpid: 3636428
[2025-07-27 09:26:01] 2025-07-27 07:26:01,098 [wrapper] Pilot exit status: 0
[2025-07-27 09:26:01] 2025-07-27 07:26:01,105 [wrapper] pandaids: 6745229179
[2025-07-27 09:26:01] 2025-07-27 07:26:01,120 [wrapper] cleanup supervisor_pilot 3656710 3636429
[2025-07-27 09:26:01] 2025-07-27 07:26:01,122 [wrapper] Test setup, not cleaning
[2025-07-27 09:26:01] 2025-07-27 07:26:01,124 [wrapper] apfmon messages muted
[2025-07-27 09:26:01] 2025-07-27 07:26:01,126 [wrapper] ==== wrapper stdout END ====
[2025-07-27 09:26:01] 2025-07-27 07:26:01,129 [wrapper] ==== wrapper stderr END ====
[2025-07-27 09:26:01]  *** Error codes and diagnostics ***
[2025-07-27 09:26:01]     "exeErrorCode": 0,
[2025-07-27 09:26:01]     "exeErrorDiag": "",
[2025-07-27 09:26:01]     "pilotErrorCode": 0,
[2025-07-27 09:26:01]     "pilotErrorDiag": "",
[2025-07-27 09:26:01]  *** Listing of results directory ***
[2025-07-27 09:26:01] total 397376
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc    530466 Jul 26 16:04 pilot3.tar.gz
[2025-07-27 09:26:01] -rwx------ 1 boinc boinc     36292 Jul 26 16:16 runpilot2-wrapper.sh
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc      5112 Jul 26 16:16 queuedata.json
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc       100 Jul 27 07:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 09:26:01] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 07:49 run_atlas
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc       105 Jul 27 07:49 job.xml
[2025-07-27 09:26:01] -rw-r--r-- 2 boinc boinc 187885916 Jul 27 07:49 EVNT.45743347._002242.pool.root.1
[2025-07-27 09:26:01] -rw-r--r-- 2 boinc boinc    542887 Jul 27 07:49 input.tar.gz
[2025-07-27 09:26:01] drwxrwx--x 2 boinc boinc      4096 Jul 27 07:49 shared
[2025-07-27 09:26:01] -rw-r--r-- 2 boinc boinc     15095 Jul 27 07:49 start_atlas.sh
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc         0 Jul 27 07:49 boinc_setup_complete
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc      6445 Jul 27 07:49 init_data.xml
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc         0 Jul 27 07:49 boinc_lockfile
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc      2560 Jul 27 07:49 pandaJob.out
[2025-07-27 09:26:01] -rw------- 1 boinc boinc    980109 Jul 27 07:49 agis_schedconf.cvmfs.json
[2025-07-27 09:26:01] -rw------- 1 boinc boinc   1593052 Jul 27 07:49 agis_ddmendpoints.agis.ALL.json
[2025-07-27 09:26:01] drwx------ 4 boinc boinc      4096 Jul 27 07:49 pilot3
[2025-07-27 09:26:01] -rw------- 1 boinc boinc 213590791 Jul 27 09:25 HITS.45743349._039250.pool.root.1
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc       529 Jul 27 09:25 boinc_task_state.xml
[2025-07-27 09:26:01] -rw------- 1 boinc boinc      1024 Jul 27 09:25 memory_monitor_summary.json
[2025-07-27 09:26:01] -rw------- 1 boinc boinc    223206 Jul 27 09:25 log.45743349._039250.job.log.tgz.1
[2025-07-27 09:26:01] -rw------- 1 boinc boinc      7768 Jul 27 09:25 heartbeat.json
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc      8192 Jul 27 09:25 boinc_mmap_file
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc        27 Jul 27 09:25 wrapper_checkpoint.txt
[2025-07-27 09:26:01] -rw------- 1 boinc boinc       747 Jul 27 09:26 pilotlog.txt
[2025-07-27 09:26:01] -rw------- 1 boinc boinc        95 Jul 27 09:26 pilot_heartbeat.json
[2025-07-27 09:26:01] -rw------- 1 boinc boinc    554247 Jul 27 09:26 log.45743349._039250.job.log.1
[2025-07-27 09:26:01] -rw------- 1 boinc boinc       357 Jul 27 09:26 output.list
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc       620 Jul 27 09:26 runtime_log
[2025-07-27 09:26:01] -rw------- 1 boinc boinc    798720 Jul 27 09:26 result.tar.gz
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc      8754 Jul 27 09:26 runtime_log.err
[2025-07-27 09:26:01] -rw------- 1 boinc boinc       663 Jul 27 09:26 LP1NDmusuz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9s0KDmXr1R9m.diag
[2025-07-27 09:26:01] -rw-r--r-- 1 boinc boinc     22017 Jul 27 09:26 stderr.txt
[2025-07-27 09:26:01] HITS file was successfully produced:
[2025-07-27 09:26:01] -rw------- 1 boinc boinc 213590791 Jul 27 09:25 shared/HITS.pool.root.1
[2025-07-27 09:26:01]  *** Contents of shared directory: ***
[2025-07-27 09:26:01] total 393408
[2025-07-27 09:26:01] -rw-r--r-- 2 boinc boinc 187885916 Jul 27 07:49 ATLAS.root_0
[2025-07-27 09:26:01] -rw-r--r-- 2 boinc boinc    542887 Jul 27 07:49 input.tar.gz
[2025-07-27 09:26:01] -rw-r--r-- 2 boinc boinc     15095 Jul 27 07:49 start_atlas.sh
[2025-07-27 09:26:01] -rw------- 1 boinc boinc 213590791 Jul 27 09:25 HITS.pool.root.1
[2025-07-27 09:26:01] -rw------- 1 boinc boinc    798720 Jul 27 09:26 result.tar.gz
09:26:02 (3632789): run_atlas exited; CPU time 16652.449850
09:26:02 (3632789): called boinc_finish(0)

</stderr_txt>
]]>

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