Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:57:44 (2012224): wrapper (7.7.26015): starting
09:57:44 (2012224): wrapper: running run_atlas (--nthreads 4)
[2025-07-28 09:57:44] Arguments: --nthreads 4
[2025-07-28 09:57:44] Threads: 4
[2025-07-28 09:57:44] Checking for CVMFS
[2025-07-28 09:57:44] No cvmfs_config command found, will try listing directly
[2025-07-28 09:57:44] CVMFS is ok
[2025-07-28 09:57:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-28 09:57:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-28 09:57:44] Further information can be found at the LHC@home message board.
[2025-07-28 09:57:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 09:57:44] Checking for apptainer binary...
[2025-07-28 09:57:44] which: no apptainer in ((null))
[2025-07-28 09:57:44] apptainer is not installed, using version from CVMFS
[2025-07-28 09:57:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 09:57:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-07-28 09:57:44] apptainer works
[2025-07-28 09:57:44] Set ATHENA_PROC_NUMBER=4
[2025-07-28 09:57:44] Set ATHENA_CORE_NUMBER=4
[2025-07-28 09:57:44] Starting ATLAS job with PandaID=6745228986
[2025-07-28 09:57:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 13:45:18]  *** The last 200 lines of the pilot log: ***
[2025-07-28 13:45:18] 2025-07-28 11:45:04,341 | INFO     | -- intersect: 2475562309.8931437
[2025-07-28 13:45:18] 2025-07-28 11:45:04,341 | INFO     | intersect: 2475562309.8931437
[2025-07-28 13:45:18] 2025-07-28 11:45:04,341 | INFO     | chi2: 0.03199718869663529
[2025-07-28 13:45:18] 2025-07-28 11:45:04,341 | INFO     | current chi2=0.03199718869663529 (change=97.67927985912492 %)
[2025-07-28 13:45:18] 2025-07-28 11:45:04,341 | INFO     | sum of square deviations: 2996454322.0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,343 | INFO     | sum of deviations: -1616535441.000002
[2025-07-28 13:45:18] 2025-07-28 11:45:04,343 | INFO     | mean x: 1753696577.0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,343 | INFO     | mean y: 2338696.244131455
[2025-07-28 13:45:18] 2025-07-28 11:45:04,343 | INFO     | -- intersect: 948427761.7996881
[2025-07-28 13:45:18] 2025-07-28 11:45:04,343 | INFO     | intersect: 948427761.7996881
[2025-07-28 13:45:18] 2025-07-28 11:45:04,343 | INFO     | chi2: 0.022022610126213628
[2025-07-28 13:45:18] 2025-07-28 11:45:04,344 | INFO     | current chi2=0.022022610126213628 (change=31.17329670737777 %)
[2025-07-28 13:45:18] 2025-07-28 11:45:04,344 | INFO     | sum of square deviations: 2790348132.0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,345 | INFO     | sum of deviations: 2407553795.0000005
[2025-07-28 13:45:18] 2025-07-28 11:45:04,345 | INFO     | mean x: 1753696729.5
[2025-07-28 13:45:18] 2025-07-28 11:45:04,345 | INFO     | mean y: 2335725.846153846
[2025-07-28 13:45:18] 2025-07-28 11:45:04,345 | INFO     | -- intersect: -1510779848.5035539
[2025-07-28 13:45:18] 2025-07-28 11:45:04,345 | INFO     | intersect: -1510779848.5035539
[2025-07-28 13:45:18] 2025-07-28 11:45:04,346 | INFO     | chi2: 0.006930847577075454
[2025-07-28 13:45:18] 2025-07-28 11:45:04,346 | INFO     | current chi2=0.006930847577075454 (change=68.52849168489057 %)
[2025-07-28 13:45:18] 2025-07-28 11:45:04,346 | INFO     | sum of square deviations: 2593916542.0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,347 | INFO     | sum of deviations: 4029815244.999999
[2025-07-28 13:45:18] 2025-07-28 11:45:04,348 | INFO     | mean x: 1753696882.0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,348 | INFO     | mean y: 2334485.18226601
[2025-07-28 13:45:18] 2025-07-28 11:45:04,348 | INFO     | -- intersect: -2722145780.7647653
[2025-07-28 13:45:18] 2025-07-28 11:45:04,348 | INFO     | intersect: -2722145780.7647653
[2025-07-28 13:45:18] 2025-07-28 11:45:04,348 | INFO     | chi2: 0.0002471980690024378
[2025-07-28 13:45:18] 2025-07-28 11:45:04,348 | INFO     | current chi2=0.0002471980690024378 (change=96.43336451633891 %)
[2025-07-28 13:45:18] 2025-07-28 11:45:04,349 | INFO     | sum of square deviations: 2406926989.5
[2025-07-28 13:45:18] 2025-07-28 11:45:04,350 | INFO     | sum of deviations: 3462135672.5
[2025-07-28 13:45:18] 2025-07-28 11:45:04,350 | INFO     | mean x: 1753697034.5
[2025-07-28 13:45:18] 2025-07-28 11:45:04,350 | INFO     | mean y: 2334948.257575758
[2025-07-28 13:45:18] 2025-07-28 11:45:04,350 | INFO     | -- intersect: -2520191529.855986
[2025-07-28 13:45:18] 2025-07-28 11:45:04,350 | INFO     | intersect: -2520191529.855986
[2025-07-28 13:45:18] 2025-07-28 11:45:04,350 | INFO     | chi2: 0.00016511910796849382
[2025-07-28 13:45:18] 2025-07-28 11:45:04,350 | INFO     | current chi2=0.00016511910796849382 (change=33.20372257160897 %)
[2025-07-28 13:45:18] 2025-07-28 11:45:04,351 | INFO     | sum of square deviations: 2229146912.0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,352 | INFO     | sum of deviations: 3030872717.9999995
[2025-07-28 13:45:18] 2025-07-28 11:45:04,352 | INFO     | mean x: 1753697187.0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,352 | INFO     | mean y: 2335317.6113989637
[2025-07-28 13:45:18] 2025-07-28 11:45:04,352 | INFO     | -- intersect: -2382089383.649225
[2025-07-28 13:45:18] 2025-07-28 11:45:04,352 | INFO     | intersect: -2382089383.649225
[2025-07-28 13:45:18] 2025-07-28 11:45:04,353 | INFO     | chi2: 0.00012591552284948383
[2025-07-28 13:45:18] 2025-07-28 11:45:04,353 | INFO     | current chi2=0.00012591552284948383 (change=23.74260956308605 %)
[2025-07-28 13:45:18] 2025-07-28 11:45:04,353 | INFO     | left removable region: 60
[2025-07-28 13:45:18] 2025-07-28 11:45:04,353 | INFO     | sum of square deviations: 1199940638.0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,354 | INFO     | sum of deviations: 1613233450.0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,354 | INFO     | mean x: 1753697919.0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,354 | INFO     | mean y: 2336353.0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,354 | INFO     | -- intersect: -2355383732.921609
[2025-07-28 13:45:18] 2025-07-28 11:45:04,354 | INFO     | intersect: -2355383732.921609
[2025-07-28 13:45:18] 2025-07-28 11:45:04,354 | INFO     | chi2: 0.00010104136236977153
[2025-07-28 13:45:18] 2025-07-28 11:45:04,355 | INFO     | -- intersect: -2355383732.921609
[2025-07-28 13:45:18] 2025-07-28 11:45:04,355 | INFO     | current memory leak: 1.34 B/s (using 157 data points, chi2=0.00)
[2025-07-28 13:45:18] 2025-07-28 11:45:04,355 | INFO     | could have reported an average CPU frequency of 2543 MHz (11 samples)
[2025-07-28 13:45:18] 2025-07-28 11:45:04,355 | INFO     | ..............................
[2025-07-28 13:45:18] 2025-07-28 11:45:04,355 | INFO     | . Timing measurements:
[2025-07-28 13:45:18] 2025-07-28 11:45:04,355 | INFO     | . get job = 0 s
[2025-07-28 13:45:18] 2025-07-28 11:45:04,356 | INFO     | . initial setup = 1 s
[2025-07-28 13:45:18] 2025-07-28 11:45:04,356 | INFO     | . payload setup = 7 s
[2025-07-28 13:45:18] 2025-07-28 11:45:04,356 | INFO     | . stage-in = 0 s
[2025-07-28 13:45:18] 2025-07-28 11:45:04,356 | INFO     | . payload execution = 13595 s
[2025-07-28 13:45:18] 2025-07-28 11:45:04,356 | INFO     | . stage-out = 1 s
[2025-07-28 13:45:18] 2025-07-28 11:45:04,356 | INFO     | . log creation = 0 s
[2025-07-28 13:45:18] 2025-07-28 11:45:04,356 | INFO     | ..............................
[2025-07-28 13:45:18] 2025-07-28 11:45:04,449 | INFO     | 
[2025-07-28 13:45:18] 2025-07-28 11:45:04,449 | INFO     | job summary report
[2025-07-28 13:45:18] 2025-07-28 11:45:04,449 | INFO     | --------------------------------------------------
[2025-07-28 13:45:18] 2025-07-28 11:45:04,449 | INFO     | PanDA job id: 6745228986
[2025-07-28 13:45:18] 2025-07-28 11:45:04,449 | INFO     | task id: 45743349
[2025-07-28 13:45:18] 2025-07-28 11:45:04,449 | INFO     | errors: (none)
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | pilot state: finished 
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | transexitcode: 0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | exeerrorcode: 0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | exeerrordiag: 
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | exitcode: 0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | exitmsg: OK
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | cpuconsumptiontime: 51708 s
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | nevents: 400
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | neventsw: 0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | pid: 2023511
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | pgrp: 2023511
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | corecount: 4
[2025-07-28 13:45:18] 2025-07-28 11:45:04,450 | INFO     | event service: False
[2025-07-28 13:45:18] 2025-07-28 11:45:04,451 | INFO     | sizes: {0: 2396647, 1: 2397514, 5: 2397776, 12: 2397832, 13606: 2428195, 13607: 2437215, 13608: 2437399, 13615: 2437593}
[2025-07-28 13:45:18] 2025-07-28 11:45:04,451 | INFO     | --------------------------------------------------
[2025-07-28 13:45:18] 2025-07-28 11:45:04,451 | INFO     | 
[2025-07-28 13:45:18] 2025-07-28 11:45:04,451 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-07-28 13:45:18] 2025-07-28 11:45:04,475 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,476 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,476 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,476 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,476 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,476 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,476 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,477 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,477 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,477 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,477 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,477 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,477 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 13:45:18] 2025-07-28 11:45:04,477 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,477 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 13:45:18] 2025-07-28 11:45:04,478 | INFO     | job 6745228986 has completed (purged errors)
[2025-07-28 13:45:18] 2025-07-28 11:45:04,478 | INFO     | overall cleanup function is called
[2025-07-28 13:45:18] 2025-07-28 11:45:05,486 | INFO     | --- collectZombieJob: --- 10, [2023511]
[2025-07-28 13:45:18] 2025-07-28 11:45:05,486 | INFO     | zombie collector waiting for pid 2023511
[2025-07-28 13:45:18] 2025-07-28 11:45:05,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 13:45:18] 2025-07-28 11:45:05,487 | INFO     | collected zombie processes
[2025-07-28 13:45:18] 2025-07-28 11:45:05,487 | INFO     | will attempt to kill all subprocesses of pid=2023511
[2025-07-28 13:45:18] 2025-07-28 11:45:05,577 | INFO     | PID=2015918 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-28 13:45:18] 2025-07-28 11:45:05,578 | INFO     | .. there are 14 such processes running
[2025-07-28 13:45:18] 2025-07-28 11:45:05,887 | INFO     | process IDs to be killed: [2023511] (in reverse order)
[2025-07-28 13:45:18] 2025-07-28 11:45:06,007 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 13:45:18] 2025-07-28 11:45:06,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 13:45:18] 2025-07-28 11:45:06,019 | INFO     | did not find any defunct processes belonging to 2023511
[2025-07-28 13:45:18] 2025-07-28 11:45:06,029 | INFO     | did not find any defunct processes belonging to 2023511
[2025-07-28 13:45:18] 2025-07-28 11:45:06,029 | INFO     | ready for new job
[2025-07-28 13:45:18] 2025-07-28 11:45:06,029 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 13:45:18] 2025-07-28 11:45:06,032 | INFO     | ***************************************
[2025-07-28 13:45:18] 2025-07-28 11:45:06,032 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 13:45:18] 2025-07-28 11:45:06,032 | INFO     | ***************************************
[2025-07-28 13:45:18] 2025-07-28 11:45:06,032 | INFO     | 
[2025-07-28 13:45:18] 2025-07-28 11:45:06,036 | INFO     | architecture information:
[2025-07-28 13:45:18] 2025-07-28 11:45:06,036 | INFO     | executing command: cat /etc/os-release
[2025-07-28 13:45:18] 2025-07-28 11:45:06,052 | INFO     | cat /etc/os-release:
[2025-07-28 13:45:18] NAME="CentOS Linux"
[2025-07-28 13:45:18] VERSION="7 (Core)"
[2025-07-28 13:45:18] ID="centos"
[2025-07-28 13:45:18] ID_LIKE="rhel fedora"
[2025-07-28 13:45:18] VERSION_ID="7"
[2025-07-28 13:45:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 13:45:18] ANSI_COLOR="0;31"
[2025-07-28 13:45:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 13:45:18] HOME_URL="https://www.centos.org/"
[2025-07-28 13:45:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 13:45:18] 
[2025-07-28 13:45:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 13:45:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 13:45:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 13:45:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 13:45:18] 
[2025-07-28 13:45:18] 2025-07-28 11:45:06,052 | INFO     | ***************************************
[2025-07-28 13:45:18] 2025-07-28 11:45:06,555 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-07-28 13:45:18] 2025-07-28 11:45:06,572 | INFO     | sufficient remaining disk space (665606684672 B)
[2025-07-28 13:45:18] 2025-07-28 11:45:06,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 13:45:18] 2025-07-28 11:45:06,573 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 13:45:18] 2025-07-28 11:45:06,573 | INFO     | update_server=False
[2025-07-28 13:45:18] 2025-07-28 11:45:06,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 13:45:18] 2025-07-28 11:45:06,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:45:18] 2025-07-28 11:45:06,574 | INFO     | aborting loop
[2025-07-28 13:45:18] 2025-07-28 11:45:06,574 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 13:45:18] 2025-07-28 11:45:06,574 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 13:45:18] 2025-07-28 11:45:06,574 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 13:45:18] 2025-07-28 11:45:06,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 13:45:18] 2025-07-28 11:45:06,902 | INFO     | all payload control threads have been joined
[2025-07-28 13:45:18] 2025-07-28 11:45:07,396 | INFO     | all data control threads have been joined
[2025-07-28 13:45:18] 2025-07-28 11:45:07,525 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 13:45:18] 2025-07-28 11:45:07,578 | INFO     | [job] job monitor thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:07,578 | INFO     | [job] retrieve thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:07,908 | INFO     | [payload] control thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:07,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:07,991 | INFO     | [payload] validate_post thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:08,021 | INFO     | all job control threads have been joined
[2025-07-28 13:45:18] 2025-07-28 11:45:08,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 13:45:18] 2025-07-28 11:45:08,326 | INFO     | [data] copytool_in thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:08,373 | INFO     | [job] validate thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:08,401 | INFO     | [data] control thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:08,472 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:08,604 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:08,695 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:08,781 | INFO     | [payload] failed_post thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:09,022 | INFO     | [job] control thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:09,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 13:45:18] 2025-07-28 11:45:09,530 | INFO     | [data] copytool_out thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:10,464 | INFO     | [job] queue monitor thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:12,043 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 13:45:18] 2025-07-28 11:45:12,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23361420203840)>', '<ExcThread(monitor, started 23361182729984)>']
[2025-07-28 13:45:18] 2025-07-28 11:45:13,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 13:45:18] 2025-07-28 11:45:13,595 | INFO     | [monitor] control thread has ended
[2025-07-28 13:45:18] 2025-07-28 11:45:17,847 | INFO     | all workflow threads have been joined
[2025-07-28 13:45:18] 2025-07-28 11:45:17,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 13:45:18] 2025-07-28 11:45:17,848 | INFO     | traces error code: 0
[2025-07-28 13:45:18] 2025-07-28 11:45:17,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 13:45:18] 2025-07-28 11:45:17,980 [wrapper] ==== pilot stdout END ====
[2025-07-28 13:45:18] 2025-07-28 11:45:17,983 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 13:45:18] 2025-07-28 11:45:17,986 [wrapper] pilotpid: 2015918
[2025-07-28 13:45:18] 2025-07-28 11:45:17,988 [wrapper] Pilot exit status: 0
[2025-07-28 13:45:18] 2025-07-28 11:45:17,997 [wrapper] pandaids: 6745228986
[2025-07-28 13:45:18] 2025-07-28 11:45:18,057 [wrapper] cleanup supervisor_pilot 2645780 2015919
[2025-07-28 13:45:18] 2025-07-28 11:45:18,060 [wrapper] Test setup, not cleaning
[2025-07-28 13:45:18] 2025-07-28 11:45:18,062 [wrapper] apfmon messages muted
[2025-07-28 13:45:18] 2025-07-28 11:45:18,066 [wrapper] ==== wrapper stdout END ====
[2025-07-28 13:45:18] 2025-07-28 11:45:18,069 [wrapper] ==== wrapper stderr END ====
[2025-07-28 13:45:18]  *** Error codes and diagnostics ***
[2025-07-28 13:45:18]     "exeErrorCode": 0,
[2025-07-28 13:45:18]     "exeErrorDiag": "",
[2025-07-28 13:45:18]     "pilotErrorCode": 0,
[2025-07-28 13:45:18]     "pilotErrorDiag": "",
[2025-07-28 13:45:18]  *** Listing of results directory ***
[2025-07-28 13:45:18] total 362376
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc    530466 Jul 26 16:04 pilot3.tar.gz
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc      5112 Jul 26 16:05 queuedata.json
[2025-07-28 13:45:18] -rwx------ 1 boinc boinc     36292 Jul 26 16:05 runpilot2-wrapper.sh
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc       100 Jul 28 09:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 13:45:18] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 09:57 run_atlas
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc       105 Jul 28 09:57 job.xml
[2025-07-28 13:45:18] -rw-r--r-- 2 boinc boinc 148727912 Jul 28 09:57 EVNT.45743347._002230.pool.root.1
[2025-07-28 13:45:18] drwxrwx--x 2 boinc boinc      4096 Jul 28 09:57 shared
[2025-07-28 13:45:18] -rw-r--r-- 2 boinc boinc    542890 Jul 28 09:57 input.tar.gz
[2025-07-28 13:45:18] -rw-r--r-- 2 boinc boinc     15095 Jul 28 09:57 start_atlas.sh
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc         0 Jul 28 09:57 boinc_lockfile
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc      2563 Jul 28 09:57 pandaJob.out
[2025-07-28 13:45:18] -rw------- 1 boinc boinc    978452 Jul 28 09:57 agis_schedconf.cvmfs.json
[2025-07-28 13:45:18] drwx------ 4 boinc boinc      4096 Jul 28 09:57 pilot3
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc      6641 Jul 28 10:58 init_data.xml
[2025-07-28 13:45:18] -rw------- 1 boinc boinc 215249204 Jul 28 13:44 HITS.45743349._039072.pool.root.1
[2025-07-28 13:45:18] -rw------- 1 boinc boinc        95 Jul 28 13:44 pilot_heartbeat.json
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc       531 Jul 28 13:44 boinc_task_state.xml
[2025-07-28 13:45:18] -rw------- 1 boinc boinc      1037 Jul 28 13:44 memory_monitor_summary.json
[2025-07-28 13:45:18] -rw------- 1 boinc boinc   1593052 Jul 28 13:44 agis_ddmendpoints.agis.ALL.json
[2025-07-28 13:45:18] -rw------- 1 boinc boinc    328196 Jul 28 13:44 log.45743349._039072.job.log.tgz.1
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc        28 Jul 28 13:44 wrapper_checkpoint.txt
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc      8192 Jul 28 13:44 boinc_mmap_file
[2025-07-28 13:45:18] -rw------- 1 boinc boinc      7825 Jul 28 13:45 heartbeat.json
[2025-07-28 13:45:18] -rw------- 1 boinc boinc      4490 Jul 28 13:45 pilotlog.txt
[2025-07-28 13:45:18] -rw------- 1 boinc boinc   1276255 Jul 28 13:45 log.45743349._039072.job.log.1
[2025-07-28 13:45:18] -rw------- 1 boinc boinc       357 Jul 28 13:45 output.list
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc       620 Jul 28 13:45 runtime_log
[2025-07-28 13:45:18] -rw------- 1 boinc boinc   1628160 Jul 28 13:45 result.tar.gz
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc      9027 Jul 28 13:45 runtime_log.err
[2025-07-28 13:45:18] -rw------- 1 boinc boinc       665 Jul 28 13:45 WkzKDmFiuz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiJSLDmKcuEtn.diag
[2025-07-28 13:45:18] -rw-r--r-- 1 boinc boinc     20787 Jul 28 13:45 stderr.txt
[2025-07-28 13:45:18] HITS file was successfully produced:
[2025-07-28 13:45:18] -rw------- 1 boinc boinc 215249204 Jul 28 13:44 shared/HITS.pool.root.1
[2025-07-28 13:45:18]  *** Contents of shared directory: ***
[2025-07-28 13:45:18] total 357600
[2025-07-28 13:45:18] -rw-r--r-- 2 boinc boinc 148727912 Jul 28 09:57 ATLAS.root_0
[2025-07-28 13:45:18] -rw-r--r-- 2 boinc boinc    542890 Jul 28 09:57 input.tar.gz
[2025-07-28 13:45:18] -rw-r--r-- 2 boinc boinc     15095 Jul 28 09:57 start_atlas.sh
[2025-07-28 13:45:18] -rw------- 1 boinc boinc 215249204 Jul 28 13:44 HITS.pool.root.1
[2025-07-28 13:45:18] -rw------- 1 boinc boinc   1628160 Jul 28 13:45 result.tar.gz
13:45:19 (2012224): run_atlas exited; CPU time 52218.501532
13:45:19 (2012224): called boinc_finish(0)

</stderr_txt>
]]>

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