Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-26 12:17:22 (24820): Detected: vboxwrapper 26206
2025-07-26 12:17:22 (24820): Detected: BOINC client v8.2.4
2025-07-26 12:17:23 (24820): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-07-26 12:17:23 (24820): Successfully copied 'init_data.xml' to the shared directory.
2025-07-26 12:17:24 (24820): Create VM. (boinc_17a3832106b0d12f, slot#2)
2025-07-26 12:17:24 (24820): Setting Memory Size for VM. (4200MB)
2025-07-26 12:17:24 (24820): Setting CPU Count for VM. (2)
2025-07-26 12:17:25 (24820): Setting Chipset Options for VM.
2025-07-26 12:17:25 (24820): Setting Graphics Controller Options for VM.
2025-07-26 12:17:25 (24820): Setting Boot Options for VM.
2025-07-26 12:17:25 (24820): Setting Network Configuration for NAT.
2025-07-26 12:17:26 (24820): Enabling VM Network Access.
2025-07-26 12:17:26 (24820): Disabling USB Support for VM.
2025-07-26 12:17:26 (24820): Disabling COM Port Support for VM.
2025-07-26 12:17:26 (24820): Disabling LPT Port Support for VM.
2025-07-26 12:17:27 (24820): Disabling Audio Support for VM.
2025-07-26 12:17:27 (24820): Disabling Clipboard Support for VM.
2025-07-26 12:17:27 (24820): Disabling Drag and Drop Support for VM.
2025-07-26 12:17:27 (24820): Adding storage controller(s) to VM.
2025-07-26 12:17:28 (24820): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-26 12:17:28 (24820): Adding VirtualBox Guest Additions to VM.
2025-07-26 12:17:29 (24820): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-26 12:17:29 (24820): forwarding host port 19296 to guest port 80
2025-07-26 12:17:29 (24820): Enabling remote desktop for VM.
2025-07-26 12:17:30 (24820): Enabling shared directory for VM.
2025-07-26 12:17:30 (24820): Starting VM using VBoxManage interface. (boinc_17a3832106b0d12f, slot#2)
2025-07-26 12:17:36 (24820): Successfully started VM. (PID = '58632')
2025-07-26 12:17:36 (24820): Reporting VM Process ID to BOINC.
2025-07-26 12:17:36 (24820): Guest Log: BIOS: VirtualBox 7.0.14
2025-07-26 12:17:36 (24820): Guest Log: CPUID EDX: 0x178bfbff
2025-07-26 12:17:36 (24820): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-26 12:17:36 (24820): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-26 12:17:36 (24820): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-26 12:17:36 (24820): Detected: Web Application Enabled (http://localhost:19296)
2025-07-26 12:17:36 (24820): Detected: Remote Desktop Enabled (localhost:19297)
2025-07-26 12:17:36 (24820): Preference change detected
2025-07-26 12:17:36 (24820): Setting CPU throttle for VM. (100%)
2025-07-26 12:17:36 (24820): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 90 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-26 12:17:38 (24820): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-26 12:17:38 (24820): Guest Log: BIOS: Booting from Hard Disk...
2025-07-26 12:17:41 (24820): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-26 12:17:41 (24820): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-26 12:17:41 (24820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-26 12:17:46 (24820): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-26 12:17:46 (24820): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-26 12:17:51 (24820): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-26 12:17:51 (24820): Guest Log: 00:00:00.000105 main     Log opened 2025-07-26T19:17:48.638657000Z
2025-07-26 12:17:51 (24820): Guest Log: 00:00:00.000178 main     OS Product: Linux
2025-07-26 12:17:51 (24820): Guest Log: 00:00:00.000199 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-26 12:17:51 (24820): Guest Log: 00:00:00.000216 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-26 12:17:51 (24820): Guest Log: 00:00:00.000231 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-26 12:17:51 (24820): Guest Log: 00:00:00.000232 main     Process ID: 1260
2025-07-26 12:17:51 (24820): Guest Log: 00:00:00.000232 main     Package type: LINUX_64BITS_GENERIC
2025-07-26 12:17:51 (24820): Guest Log: 00:00:00.001339 main     5.2.32 r132073 started. Verbose level = 0
2025-07-26 12:17:51 (24820): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-26 12:17:51 (24820): Guest Log: [INFO] Mounting shared directory
2025-07-26 12:17:51 (24820): Guest Log: [INFO] Checking for init_data.xml
2025-07-26 12:17:58 (24820): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-26 12:17:58 (24820): Guest Log: [INFO] Detected branch: prod
2025-07-26 12:17:58 (24820): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-26 12:17:58 (24820): Guest Log: Copying input files
2025-07-26 12:17:59 (24820): Guest Log: Copied input files into RunAtlas.
2025-07-26 12:17:59 (24820): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-26 12:17:59 (24820): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-26 12:17:59 (24820): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-26 12:17:59 (24820): Guest Log: Further information can be found at the LHC@home message board.
2025-07-26 12:18:06 (24820): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-26 12:18:07 (24820): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-26 12:18:07 (24820): Guest Log: 2.6.3.0 1536 0 32212 148787 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-26 12:18:07 (24820): Guest Log: copied the webapp to /var/www
2025-07-26 12:18:07 (24820): Guest Log: ATHENA_PROC_NUMBER=2
2025-07-26 12:18:07 (24820): Guest Log: ATHENA_CORE_NUMBER=2
2025-07-26 12:18:07 (24820): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-26 12:18:07 (24820): Guest Log:  *** Starting ATLAS job. (PandaID=6745228237 taskID=45743349) ***
2025-07-26 13:57:39 (24820): Status Report: Elapsed Time: '6000.000000'
2025-07-26 13:57:39 (24820): Status Report: CPU Time: '11669.109375'
2025-07-26 15:07:34 (24820): Guest Log:  *** Job finished ***
2025-07-26 15:07:34 (24820): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:19,780 | INFO     | all workflow threads have been joined
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:19,780 | INFO     | end of generic workflow (traces error code: 0)
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:19,780 | INFO     | traces error code: 0
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:19,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,207 | INFO     | PID=5831 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,207 | INFO     | found 0 job(s) in 20 queues
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,207 | INFO     | [monitor] control thread has ended
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,256 [wrapper] ==== pilot stdout END ====
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,259 [wrapper] ==== wrapper stdout RESUME ====
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,263 [wrapper] pilotpid: 5831
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,266 [wrapper] Pilot exit status: 0
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,315 [wrapper] pandaids: 6745228237
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,332 [wrapper] cleanup supervisor_pilot 10366 5832
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,338 [wrapper] Test setup, not cleaning
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,341 [wrapper] apfmon messages muted
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,344 [wrapper] ==== wrapper stdout END ====
2025-07-26 15:07:34 (24820): Guest Log: 2025-07-26 22:07:33,347 [wrapper] ==== wrapper stderr END ====
2025-07-26 15:07:34 (24820): Guest Log:  *** Error codes and diagnostics ***
2025-07-26 15:07:34 (24820): Guest Log:     "exeErrorCode": 0,
2025-07-26 15:07:34 (24820): Guest Log:     "exeErrorDiag": "",
2025-07-26 15:07:34 (24820): Guest Log:     "pilotErrorCode": 0,
2025-07-26 15:07:34 (24820): Guest Log:     "pilotErrorDiag": "",
2025-07-26 15:07:34 (24820): Guest Log:  *** Listing of results directory ***
2025-07-26 15:07:34 (24820): Guest Log: total 204740
2025-07-26 15:07:34 (24820): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 26 13:41 pilot3.tar.gz
2025-07-26 15:07:34 (24820): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 26 13:43 queuedata.json
2025-07-26 15:07:34 (24820): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 26 13:43 runpilot2-wrapper.sh
2025-07-26 15:07:34 (24820): Guest Log: -rwxr-xr-x. 1 atlas atlas      9400 Jul 26 19:17 init_data.xml
2025-07-26 15:07:34 (24820): Guest Log: -rwxr-xr-x. 1 atlas atlas    542894 Jul 26 19:17 input.tar.gz
2025-07-26 15:07:34 (24820): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 26 19:17 start_atlas.sh
2025-07-26 15:07:34 (24820): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 26 19:17 EVNT.45743347._002210.pool.root.1 -> /data/./ATLAS.root_0
2025-07-26 15:07:34 (24820): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 26 19:18 pandaJob.out
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas    980125 Jul 26 19:18 agis_schedconf.cvmfs.json
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 26 19:18 agis_ddmendpoints.agis.ALL.json
2025-07-26 15:07:34 (24820): Guest Log: drwx------. 4 atlas atlas      4096 Jul 26 19:18 pilot3
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas 203511808 Jul 26 22:06 HITS.45743349._038691.pool.root.1
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas      1036 Jul 26 22:06 memory_monitor_summary.json
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas    257842 Jul 26 22:06 log.45743349._038691.job.log.tgz.1
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas      7837 Jul 26 22:07 heartbeat.json
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas        95 Jul 26 22:07 pilot_heartbeat.json
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas       744 Jul 26 22:07 pilotlog.txt
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas    910790 Jul 26 22:07 log.45743349._038691.job.log.1
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas       357 Jul 26 22:07 output.list
2025-07-26 15:07:34 (24820): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 26 22:07 runtime_log
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas   1187840 Jul 26 22:07 result.tar.gz
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas       652 Jul 26 22:07 xOnLDmXMuz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm3p0KDmDpTYHn.diag
2025-07-26 15:07:34 (24820): Guest Log: -rw-r--r--. 1 atlas atlas      8585 Jul 26 22:07 runtime_log.err
2025-07-26 15:07:34 (24820): Guest Log: Looking for outputfile HITS.45743349._038691.pool.root.1
2025-07-26 15:07:34 (24820): Guest Log: HITS file was successfully produced
2025-07-26 15:07:34 (24820): Guest Log: -rw-------. 1 atlas atlas 203511808 Jul 26 22:06 /home/atlas/RunAtlas/HITS.45743349._038691.pool.root.1
2025-07-26 15:07:34 (24820): Guest Log: Successfully finished the ATLAS job!
2025-07-26 15:07:34 (24820): Guest Log: Copying the results back to the shared directory!
2025-07-26 15:07:34 (24820): Guest Log:  *** Contents of shared directory: ***
2025-07-26 15:07:34 (24820): Guest Log: total 423464
2025-07-26 15:07:34 (24820): Guest Log: -rwxrwxrwx. 1 root root 228349009 Jul 26 19:17 ATLAS.root_0
2025-07-26 15:07:34 (24820): Guest Log: -rwxrwxrwx. 1 root root 203511808 Jul 26 22:07 HITS.pool.root.1
2025-07-26 15:07:34 (24820): Guest Log: -rwxrwxrwx. 1 root root      9400 Jul 26 19:17 init_data.xml
2025-07-26 15:07:34 (24820): Guest Log: -rwxrwxrwx. 1 root root    542894 Jul 26 19:17 input.tar.gz
2025-07-26 15:07:34 (24820): Guest Log: -rwxrwxrwx. 1 root root   1187840 Jul 26 22:07 result.tar.gz
2025-07-26 15:07:34 (24820): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 26 19:17 start_atlas.sh
2025-07-26 15:07:34 (24820): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-26 15:07:34 (24820): VM Completion File Detected.
2025-07-26 15:07:34 (24820): Powering off VM.
2025-07-26 15:07:35 (24820): Successfully stopped VM.
2025-07-26 15:07:35 (24820): Deregistering VM. (boinc_17a3832106b0d12f, slot#2)
2025-07-26 15:07:35 (24820): Removing network bandwidth throttle group from VM.
2025-07-26 15:07:35 (24820): Removing VM from VirtualBox.
15:07:40 (24820): called boinc_finish(0)

</stderr_txt>
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