Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:07:56 (2460772): wrapper (7.7.26015): starting
02:07:56 (2460772): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 02:07:56] Arguments: --nthreads 12
[2025-07-27 02:07:56] Threads: 12
[2025-07-27 02:07:56] Checking for CVMFS
[2025-07-27 02:07:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 02:07:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 02:07:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 02:07:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 02:07:56] 2.9.2.0 1254439 3213 66640 148793 2 57 23107788 36864001 0 130560 0 2999055 99.991 117059 1367 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 02:07:56] CVMFS is ok
[2025-07-27 02:07:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 02:07:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 02:07:56] Further information can be found at the LHC@home message board.
[2025-07-27 02:07:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 02:07:56] Checking for apptainer binary...
[2025-07-27 02:07:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 02:07:56] Running /usr/bin/apptainer --version
[2025-07-27 02:07:56] apptainer version 1.4.1-1.1
[2025-07-27 02:07:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 02:07:57] thserv06
[2025-07-27 02:07:57] apptainer works
[2025-07-27 02:07:57] Set ATHENA_PROC_NUMBER=12
[2025-07-27 02:07:57] Set ATHENA_CORE_NUMBER=12
[2025-07-27 02:07:57] Starting ATLAS job with PandaID=6745228794
[2025-07-27 02:07:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 03:19:27]  *** The last 200 lines of the pilot log: ***
[2025-07-27 03:19:27]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745228794/log.45743349._038880.job.log.tgz.1
[2025-07-27 03:19:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/11/log.45743349._038880.job.log.tgz.1
[2025-07-27 03:19:27]  workdir=None
[2025-07-27 03:19:27] ]
[2025-07-27 03:19:27] 2025-07-27 01:15:01,448 | INFO     | transferring file log.45743349._038880.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745228794/log.45743349._038880.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 03:19:27] 2025-07-27 01:15:01,448 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745228794/log.45743349._038880.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0388
[2025-07-27 03:19:27] 2025-07-27 01:15:01,474 | INFO     | adding to output.list: log.45743349._038880.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/11/log.45743349._038880.job.log.tg
[2025-07-27 03:19:27] 2025-07-27 01:15:01,475 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 03:19:27] 2025-07-27 01:15:01,475 | INFO     | summary of transferred files:
[2025-07-27 03:19:27] 2025-07-27 01:15:01,475 | INFO     |  -- lfn=log.45743349._038880.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 03:19:27] 2025-07-27 01:15:01,475 | INFO     | stage-out finished correctly
[2025-07-27 03:19:27] 2025-07-27 01:15:01,541 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 03:19:27] 2025-07-27 01:15:02,862 | INFO     | job 6745228794 has state=finished
[2025-07-27 03:19:27] 2025-07-27 01:15:02,862 | INFO     | preparing for final server update for job 6745228794 in state='finished'
[2025-07-27 03:19:27] 2025-07-27 01:15:02,863 | INFO     | this job has now completed (state=finished)
[2025-07-27 03:19:27] 2025-07-27 01:15:02,863 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 03:19:27] 2025-07-27 01:15:02,863 | INFO     | log transfer has been attempted: DONE
[2025-07-27 03:19:27] 2025-07-27 01:15:02,863 | INFO     | job 6745228794 has finished - writing final server update
[2025-07-27 03:19:27] 2025-07-27 01:15:02,863 | INFO     | total number of processed events: 400 (read)
[2025-07-27 03:19:27] 2025-07-27 01:15:02,864 | INFO     | executing command: lscpu
[2025-07-27 03:19:27] 2025-07-27 01:15:02,908 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 03:19:27] 2025-07-27 01:15:05,585 | WARNING  | process 2471561 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 03:19:27] 2025-07-27 01:15:05,585 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745228794/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:19:27] 2025-07-27 01:15:05,586 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745228794/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:19:27] 2025-07-27 01:15:05,587 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3721078 B
[2025-07-27 03:19:27] 2025-07-27 01:15:05,587 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16263 B
[2025-07-27 03:19:27] 2025-07-27 01:15:05,587 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 03:19:27] 2025-07-27 01:15:06,652 | INFO     | PID=2464637 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 03:19:27] 2025-07-27 01:15:07,489 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 03:19:27] 2025-07-27 01:15:07,510 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2529.4795312499996
[2025-07-27 03:19:27] 2025-07-27 01:15:07,522 | INFO     | sufficient remaining disk space (464249683968 B)
[2025-07-27 03:19:27] 2025-07-27 01:15:07,523 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 03:19:27] 2025-07-27 01:15:07,523 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6745228794: 4015994 B (within 2537553920 B limit)
[2025-07-27 03:19:27] 2025-07-27 01:15:07,524 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6745228794/HITS.45743349._038880.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 03:19:27] 2025-07-27 01:15:07,524 | INFO     | total size of present files: 0 B (workdir size: 4015994 B)
[2025-07-27 03:19:27] 2025-07-27 01:15:07,524 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6745228794/HITS.45743349._038880.pool.root.1 since it does not exist
[2025-07-27 03:19:27] 2025-07-27 01:15:07,533 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745228794/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:19:27] 2025-07-27 01:15:07,534 | INFO     | extracted standard info from prmon json
[2025-07-27 03:19:27] 2025-07-27 01:15:07,534 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:19:27] 2025-07-27 01:15:07,534 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:19:27] 2025-07-27 01:15:07,534 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:19:27] 2025-07-27 01:15:07,534 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:19:27] 2025-07-27 01:15:07,535 | INFO     | fitting pss+swap vs Time
[2025-07-27 03:19:27] 2025-07-27 01:15:07,535 | INFO     | sum of square deviations: 63666310.0
[2025-07-27 03:19:27] 2025-07-27 01:15:07,535 | INFO     | sum of deviations: 5187045147.0
[2025-07-27 03:19:27] 2025-07-27 01:15:07,536 | INFO     | mean x: 1753576999.0
[2025-07-27 03:19:27] 2025-07-27 01:15:07,536 | INFO     | mean y: 2802286.779661017
[2025-07-27 03:19:27] 2025-07-27 01:15:07,536 | INFO     | -- intersect: -142865271307.46152
[2025-07-27 03:19:27] 2025-07-27 01:15:07,536 | INFO     | intersect: -142865271307.46152
[2025-07-27 03:19:27] 2025-07-27 01:15:07,536 | INFO     | chi2: 0.13889423134627185
[2025-07-27 03:19:27] 2025-07-27 01:15:07,536 | INFO     | -- intersect: -142865271307.46152
[2025-07-27 03:19:27] 2025-07-27 01:15:07,536 | INFO     | current memory leak: 81.47 B/s (using 59 data points, chi2=0.14)
[2025-07-27 03:19:27] 2025-07-27 01:15:07,536 | INFO     | could have reported an average CPU frequency of 1987 MHz (6 samples)
[2025-07-27 03:19:27] 2025-07-27 01:15:07,536 | INFO     | ..............................
[2025-07-27 03:19:27] 2025-07-27 01:15:07,536 | INFO     | . Timing measurements:
[2025-07-27 03:19:27] 2025-07-27 01:15:07,536 | INFO     | . get job = 0 s
[2025-07-27 03:19:27] 2025-07-27 01:15:07,536 | INFO     | . initial setup = 1 s
[2025-07-27 03:19:27] 2025-07-27 01:15:07,537 | INFO     | . payload setup = 10 s
[2025-07-27 03:19:27] 2025-07-27 01:15:07,537 | INFO     | . stage-in = 0 s
[2025-07-27 03:19:27] 2025-07-27 01:15:07,537 | INFO     | . payload execution = 3978 s
[2025-07-27 03:19:27] 2025-07-27 01:15:07,537 | INFO     | . stage-out = 0 s
[2025-07-27 03:19:27] 2025-07-27 01:15:07,537 | INFO     | . log creation = 0 s
[2025-07-27 03:19:27] 2025-07-27 01:15:07,537 | INFO     | ..............................
[2025-07-27 03:19:27] 2025-07-27 01:15:07,632 | INFO     | 
[2025-07-27 03:19:27] 2025-07-27 01:15:07,632 | INFO     | job summary report
[2025-07-27 03:19:27] 2025-07-27 01:15:07,632 | INFO     | --------------------------------------------------
[2025-07-27 03:19:27] 2025-07-27 01:15:07,632 | INFO     | PanDA job id: 6745228794
[2025-07-27 03:19:27] 2025-07-27 01:15:07,632 | INFO     | task id: 45743349
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | errors: (none)
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | pilot state: finished 
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | transexitcode: 0
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | exeerrorcode: 0
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | exeerrordiag: 
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | exitcode: 0
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | exitmsg: OK
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | cpuconsumptiontime: 38663 s
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | nevents: 400
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | neventsw: 0
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | pid: 2471561
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | pgrp: 2471561
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | corecount: 12
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | event service: False
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | sizes: {0: 2397301, 1: 2397500, 6: 2397762, 11: 2397790, 3992: 2423582, 3993: 2423581, 3994: 2432825, 4000: 2432991}
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | --------------------------------------------------
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | 
[2025-07-27 03:19:27] 2025-07-27 01:15:07,633 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 03:19:27] 2025-07-27 01:15:07,647 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,648 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 03:19:27] 2025-07-27 01:15:07,649 | INFO     | job 6745228794 has completed (purged errors)
[2025-07-27 03:19:27] 2025-07-27 01:15:07,649 | INFO     | overall cleanup function is called
[2025-07-27 03:19:27] 2025-07-27 01:15:07,800 | INFO     | number of running child processes to parent process 2471561: 1
[2025-07-27 03:19:27] 2025-07-27 01:15:07,800 | INFO     | maximum number of monitored processes: 6
[2025-07-27 03:19:27] 2025-07-27 01:15:07,800 | INFO     | aborting job monitoring since job object (job id=6745228794) has expired
[2025-07-27 03:19:27] 2025-07-27 01:15:08,668 | INFO     | --- collectZombieJob: --- 10, [2471561]
[2025-07-27 03:19:27] 2025-07-27 01:15:08,668 | INFO     | zombie collector waiting for pid 2471561
[2025-07-27 03:19:27] 2025-07-27 01:15:08,668 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 03:19:27] 2025-07-27 01:15:08,669 | INFO     | collected zombie processes
[2025-07-27 03:19:27] 2025-07-27 01:15:08,669 | INFO     | will attempt to kill all subprocesses of pid=2471561
[2025-07-27 03:19:27] 2025-07-27 01:15:08,873 | INFO     | process IDs to be killed: [2471561] (in reverse order)
[2025-07-27 03:19:27] 2025-07-27 01:15:08,914 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 03:19:27] 2025-07-27 01:15:08,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 03:19:27] 2025-07-27 01:15:08,918 | INFO     | did not find any defunct processes belonging to 2471561
[2025-07-27 03:19:27] 2025-07-27 01:15:08,921 | INFO     | did not find any defunct processes belonging to 2471561
[2025-07-27 03:19:27] 2025-07-27 01:15:08,921 | INFO     | ready for new job
[2025-07-27 03:19:27] 2025-07-27 01:15:08,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 03:19:27] 2025-07-27 01:15:08,923 | INFO     | ***************************************
[2025-07-27 03:19:27] 2025-07-27 01:15:08,923 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 03:19:27] 2025-07-27 01:15:08,923 | INFO     | ***************************************
[2025-07-27 03:19:27] 2025-07-27 01:15:08,923 | INFO     | 
[2025-07-27 03:19:27] 2025-07-27 01:15:08,925 | INFO     | architecture information:
[2025-07-27 03:19:27] 2025-07-27 01:15:08,926 | INFO     | executing command: cat /etc/os-release
[2025-07-27 03:19:27] 2025-07-27 01:15:08,938 | INFO     | cat /etc/os-release:
[2025-07-27 03:19:27] NAME="CentOS Linux"
[2025-07-27 03:19:27] VERSION="7 (Core)"
[2025-07-27 03:19:27] ID="centos"
[2025-07-27 03:19:27] ID_LIKE="rhel fedora"
[2025-07-27 03:19:27] VERSION_ID="7"
[2025-07-27 03:19:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 03:19:27] ANSI_COLOR="0;31"
[2025-07-27 03:19:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 03:19:27] HOME_URL="https://www.centos.org/"
[2025-07-27 03:19:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 03:19:27] 
[2025-07-27 03:19:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 03:19:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 03:19:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 03:19:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 03:19:27] 
[2025-07-27 03:19:27] 2025-07-27 01:15:08,938 | INFO     | ***************************************
[2025-07-27 03:19:27] 2025-07-27 01:15:09,441 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 03:19:27] 2025-07-27 01:15:09,457 | INFO     | sufficient remaining disk space (464253878272 B)
[2025-07-27 03:19:27] 2025-07-27 01:15:09,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 03:19:27] 2025-07-27 01:15:09,457 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 03:19:27] 2025-07-27 01:15:09,458 | INFO     | update_server=False
[2025-07-27 03:19:27] 2025-07-27 01:15:09,458 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 03:19:27] 2025-07-27 01:15:09,458 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:19:27] 2025-07-27 01:15:09,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:19:27] 2025-07-27 01:15:09,458 | INFO     | aborting loop
[2025-07-27 03:19:27] 2025-07-27 01:15:09,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 03:19:27] 2025-07-27 01:15:09,819 | INFO     | all payload control threads have been joined
[2025-07-27 03:19:27] 2025-07-27 01:15:09,873 | INFO     | all data control threads have been joined
[2025-07-27 03:19:27] 2025-07-27 01:15:10,463 | INFO     | [job] retrieve thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:10,464 | INFO     | [job] queue monitor thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:10,464 | INFO     | [job] job monitor thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:10,483 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:10,664 | INFO     | [payload] failed_post thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:10,763 | INFO     | [data] copytool_in thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:10,783 | INFO     | all job control threads have been joined
[2025-07-27 03:19:27] 2025-07-27 01:15:10,824 | INFO     | [payload] control thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:10,879 | INFO     | [data] control thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:10,915 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:10,947 | INFO     | [job] validate thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:11,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:11,308 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:11,559 | INFO     | [data] copytool_out thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:11,788 | INFO     | [job] control thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:11,959 | INFO     | [payload] validate_post thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:12,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 03:19:27] 2025-07-27 01:15:16,155 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 03:19:27] 2025-07-27 01:15:16,207 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455057905472)>', '<ExcThread(monitor, started 140454205052672)>']
[2025-07-27 03:19:27] 2025-07-27 01:15:21,233 | INFO     | all workflow threads have been joined
[2025-07-27 03:19:27] 2025-07-27 01:15:21,242 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 03:19:27] 2025-07-27 01:15:21,242 | INFO     | traces error code: 0
[2025-07-27 03:19:27] 2025-07-27 01:15:21,243 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 03:19:27] 2025-07-27 01:15:38,999 | INFO     | PID=2464637 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 03:19:27] 2025-07-27 01:15:38,999 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 03:19:27] 2025-07-27 01:15:38,999 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 03:19:27] 2025-07-27 01:15:38,999 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 03:19:27] 2025-07-27 01:15:39,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 03:19:27] 2025-07-27 01:15:39,000 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 03:19:27] 2025-07-27 01:15:39,000 | INFO     | [monitor] control thread has ended
[2025-07-27 03:19:27] 2025-07-27 01:15:39,096 [wrapper] ==== pilot stdout END ====
[2025-07-27 03:19:27] 2025-07-27 01:15:39,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 03:19:27] 2025-07-27 01:15:39,105 [wrapper] pilotpid: 2464637
[2025-07-27 03:19:27] 2025-07-27 01:15:39,108 [wrapper] Pilot exit status: 0
[2025-07-27 03:19:27] 2025-07-27 01:15:39,115 [wrapper] pandaids: 6745228794
[2025-07-27 03:19:27] 2025-07-27 01:15:39,156 [wrapper] cleanup supervisor_pilot 2482438 2464638
[2025-07-27 03:19:27] 2025-07-27 01:15:39,160 [wrapper] Test setup, not cleaning
[2025-07-27 03:19:27] 2025-07-27 01:15:39,163 [wrapper] apfmon messages muted
[2025-07-27 03:19:27] 2025-07-27 01:15:39,169 [wrapper] ==== wrapper stdout END ====
[2025-07-27 03:19:27] 2025-07-27 01:15:39,176 [wrapper] ==== wrapper stderr END ====
[2025-07-27 03:19:27]  *** Error codes and diagnostics ***
[2025-07-27 03:19:27]     "exeErrorCode": 0,
[2025-07-27 03:19:27]     "exeErrorDiag": "",
[2025-07-27 03:19:27]     "pilotErrorCode": 0,
[2025-07-27 03:19:27]     "pilotErrorDiag": "",
[2025-07-27 03:19:27]  *** Listing of results directory ***
[2025-07-27 03:19:27] total 390104
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc    530466 Jul 26 15:41 pilot3.tar.gz
[2025-07-27 03:19:27] -rwx------ 1 boinc boinc     36292 Jul 26 15:49 runpilot2-wrapper.sh
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc      5112 Jul 26 15:49 queuedata.json
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc       100 Jul 27 02:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 03:19:27] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 02:07 run_atlas
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc       105 Jul 27 02:07 job.xml
[2025-07-27 03:19:27] -rw-r--r-- 2 boinc boinc 186895305 Jul 27 02:07 EVNT.45743347._002218.pool.root.1
[2025-07-27 03:19:27] drwxrwx--x 2 boinc boinc      4096 Jul 27 02:07 shared
[2025-07-27 03:19:27] -rw-r--r-- 2 boinc boinc    542878 Jul 27 02:07 input.tar.gz
[2025-07-27 03:19:27] -rw-r--r-- 2 boinc boinc     15095 Jul 27 02:07 start_atlas.sh
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc         0 Jul 27 02:07 boinc_setup_complete
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc      6413 Jul 27 02:07 init_data.xml
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc         0 Jul 27 02:07 boinc_lockfile
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc      2560 Jul 27 02:07 pandaJob.out
[2025-07-27 03:19:27] -rw------- 1 boinc boinc    980117 Jul 27 02:08 agis_schedconf.cvmfs.json
[2025-07-27 03:19:27] -rw------- 1 boinc boinc   1593052 Jul 27 02:08 agis_ddmendpoints.agis.ALL.json
[2025-07-27 03:19:27] drwx------ 4 boinc boinc      4096 Jul 27 02:08 pilot3
[2025-07-27 03:19:27] -rw------- 1 boinc boinc 207214858 Jul 27 03:14 HITS.45743349._038880.pool.root.1
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc       528 Jul 27 03:14 boinc_task_state.xml
[2025-07-27 03:19:27] -rw------- 1 boinc boinc      1040 Jul 27 03:14 memory_monitor_summary.json
[2025-07-27 03:19:27] -rw------- 1 boinc boinc    344823 Jul 27 03:15 log.45743349._038880.job.log.tgz.1
[2025-07-27 03:19:27] -rw------- 1 boinc boinc        95 Jul 27 03:15 pilot_heartbeat.json
[2025-07-27 03:19:27] -rw------- 1 boinc boinc      7798 Jul 27 03:15 heartbeat.json
[2025-07-27 03:19:27] -rw------- 1 boinc boinc       817 Jul 27 03:15 pilotlog.txt
[2025-07-27 03:19:27] -rw------- 1 boinc boinc    398837 Jul 27 03:15 log.45743349._038880.job.log.1
[2025-07-27 03:19:27] -rw------- 1 boinc boinc       357 Jul 27 03:15 output.list
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc       620 Jul 27 03:15 runtime_log
[2025-07-27 03:19:27] -rw------- 1 boinc boinc    757760 Jul 27 03:15 result.tar.gz
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc      8746 Jul 27 03:15 runtime_log.err
[2025-07-27 03:19:27] -rw------- 1 boinc boinc       663 Jul 27 03:15 o7gKDmkSuz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4HSLDmBd638m.diag
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc        26 Jul 27 03:19 wrapper_checkpoint.txt
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc      8192 Jul 27 03:19 boinc_mmap_file
[2025-07-27 03:19:27] -rw-r--r-- 1 boinc boinc     22702 Jul 27 03:19 stderr.txt
[2025-07-27 03:19:27] HITS file was successfully produced:
[2025-07-27 03:19:27] -rw------- 1 boinc boinc 207214858 Jul 27 03:14 shared/HITS.pool.root.1
[2025-07-27 03:19:27]  *** Contents of shared directory: ***
[2025-07-27 03:19:27] total 386168
[2025-07-27 03:19:27] -rw-r--r-- 2 boinc boinc 186895305 Jul 27 02:07 ATLAS.root_0
[2025-07-27 03:19:27] -rw-r--r-- 2 boinc boinc    542878 Jul 27 02:07 input.tar.gz
[2025-07-27 03:19:27] -rw-r--r-- 2 boinc boinc     15095 Jul 27 02:07 start_atlas.sh
[2025-07-27 03:19:27] -rw------- 1 boinc boinc 207214858 Jul 27 03:14 HITS.pool.root.1
[2025-07-27 03:19:27] -rw------- 1 boinc boinc    757760 Jul 27 03:15 result.tar.gz
03:19:29 (2460772): run_atlas exited; CPU time 38683.670165
03:19:29 (2460772): called boinc_finish(0)

</stderr_txt>
]]>

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